>DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like protein A)|
           (Dynamin-like protein 1)
          Length = 610

 Score =  239 bits (609), Expect = 8e-63
 Identities = 116/146 (79%), Positives = 135/146 (92%)
 Frame = -2

Query: 704 LERMRDESKKNTLKLVDMETSYLTVDFFRKLPQDVEKGGNPSHSIFDRYNDSYLRRIGTT 525
           L++MR+ SKK TL+LVDME SYLTVDFFRKLPQDVEKGGNP+HSIFDRYNDSYLRRIG+ 
Sbjct: 465 LDKMREGSKKATLQLVDMECSYLTVDFFRKLPQDVEKGGNPTHSIFDRYNDSYLRRIGSN 524

Query: 524 VLAYVNMVSSTLRNSIPKSIVYCQVREAKRSLLDHFFTELGAREIRQLSKLLDEDPAVME 345
           VL+YVNMV + LRNSIPKSIVYCQVREAKRSLLDHFF ELG  ++++LS LL+EDPA+ME
Sbjct: 525 VLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLNEDPAIME 584

Query: 344 RRTNLAKRLELYRSAQAEIDAVAWSK 267
           RR+ ++KRLELYR+AQ+EIDAVAWSK
Sbjct: 585 RRSAISKRLELYRAAQSEIDAVAWSK 610

>DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like protein B)|
          Length = 610

 Score =  238 bits (606), Expect = 2e-62
 Identities = 117/146 (80%), Positives = 134/146 (91%)
 Frame = -2

Query: 704 LERMRDESKKNTLKLVDMETSYLTVDFFRKLPQDVEKGGNPSHSIFDRYNDSYLRRIGTT 525
           L+RMRDES+K TL LVDME+ YLTV+FFRKLPQD EKGGNP+HSIFDRYND+YLRRIG+ 
Sbjct: 465 LDRMRDESRKATLLLVDMESGYLTVEFFRKLPQDSEKGGNPTHSIFDRYNDAYLRRIGSN 524

Query: 524 VLAYVNMVSSTLRNSIPKSIVYCQVREAKRSLLDHFFTELGAREIRQLSKLLDEDPAVME 345
           VL+YVNMV + LRNSIPKSIVYCQVREAKRSLLD FFTELG +E+ +LSKLLDEDPAV +
Sbjct: 525 VLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDEDPAVQQ 584

Query: 344 RRTNLAKRLELYRSAQAEIDAVAWSK 267
           RRT++AKRLELYRSAQ +I+AVAWSK
Sbjct: 585 RRTSIAKRLELYRSAQTDIEAVAWSK 610

>DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like protein E)|
           (Dynamin-like protein 4) (Dynamin-like protein DLP2)
          Length = 624

 Score =  178 bits (451), Expect = 2e-44
 Identities = 86/152 (56%), Positives = 118/152 (77%), Gaps = 8/152 (5%)
 Frame = -2

Query: 704 LERMRDESKKNTLKLVDMETSYLTVDFFRKLPQDVEKG--------GNPSHSIFDRYNDS 549
           LE+ R+ESKK+ ++LVDME++YLT +FFRKLPQ++E+          +PS +  D+Y D 
Sbjct: 471 LEKFREESKKSVIRLVDMESAYLTAEFFRKLPQEIERPVTNSKNQTASPSSATLDQYGDG 530

Query: 548 YLRRIGTTVLAYVNMVSSTLRNSIPKSIVYCQVREAKRSLLDHFFTELGAREIRQLSKLL 369
           + RRI + V AYVNMVS TLRN+IPK+ VYCQVR+AK +LL++F++++  RE +QL +LL
Sbjct: 531 HFRRIASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGKQLGQLL 590

Query: 368 DEDPAVMERRTNLAKRLELYRSAQAEIDAVAW 273
           DEDPA+M+RR   AKRLELY+ A+ EIDAVAW
Sbjct: 591 DEDPALMDRRLECAKRLELYKKARDEIDAVAW 622

>DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like protein C)|
           (Dynamin-like protein 5) (Dynamin-like protein DLP1)
          Length = 614

 Score =  172 bits (436), Expect = 9e-43
 Identities = 88/148 (59%), Positives = 115/148 (77%), Gaps = 4/148 (2%)
 Frame = -2

Query: 704 LERMRDESKKNTLKLVDMETSYLTVDFFRKLPQDVEKGG-NPSHSIF---DRYNDSYLRR 537
           LER RDES+K  L+LVDME+SYLTV+FFRKL  + EK   NP ++     D Y+D++ R+
Sbjct: 466 LERFRDESRKTVLRLVDMESSYLTVEFFRKLHLEPEKEKPNPRNAPAPNADPYSDNHFRK 525

Query: 536 IGTTVLAYVNMVSSTLRNSIPKSIVYCQVREAKRSLLDHFFTELGAREIRQLSKLLDEDP 357
           IG+ V AY+NMV  TLRNS+PK++VYCQVREAKRSLL+ F+ ++G +E  +L  +LDEDP
Sbjct: 526 IGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDP 585

Query: 356 AVMERRTNLAKRLELYRSAQAEIDAVAW 273
            +MERR  LAKRLELY+ A+ +IDAVAW
Sbjct: 586 QLMERRGTLAKRLELYKQARDDIDAVAW 613

>DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like protein D)|
           (Dynamin-like protein DLP3)
          Length = 612

 Score =  152 bits (383), Expect = 1e-36
 Identities = 75/145 (51%), Positives = 107/145 (73%), Gaps = 1/145 (0%)
 Frame = -2

Query: 704 LERMRDESKKNTLKLVDMETSYLTVDFFRKLPQDVEKGGNPSH-SIFDRYNDSYLRRIGT 528
           L++ R+ES K+ L+LVDME+SYLTVDFFRKL  + +     S  S  D+Y D + R+I +
Sbjct: 466 LDKFREESMKSVLRLVDMESSYLTVDFFRKLHVESQNMSLSSPTSAIDQYGDGHFRKIAS 525

Query: 527 TVLAYVNMVSSTLRNSIPKSIVYCQVREAKRSLLDHFFTELGAREIRQLSKLLDEDPAVM 348
            V AY+ MV+ TL N+IPK++V+CQVR+AK SLL++F+ ++   + ++L +LLDE+PA+M
Sbjct: 526 NVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDENPALM 585

Query: 347 ERRTNLAKRLELYRSAQAEIDAVAW 273
           ERR   AKRLELY+ A+ EIDA  W
Sbjct: 586 ERRMQCAKRLELYKKARDEIDAAVW 610

>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)|
           (Dynamin-like protein 6)
          Length = 914

 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 25/78 (32%), Positives = 42/78 (53%)
 Frame = -2

Query: 545 LRRIGTTVLAYVNMVSSTLRNSIPKSIVYCQVREAKRSLLDHFFTELGAREIRQLSKLLD 366
           LR +   V  YV  V ++L  ++PK++V CQV +AK  +L+  ++ + A    ++  L+ 
Sbjct: 730 LRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIESLIQ 789

Query: 365 EDPAVMERRTNLAKRLEL 312
           ED  V  RR    K+  L
Sbjct: 790 EDQNVKRRRERYQKQSSL 807

>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)|
           (Dynamin-like protein 3)
          Length = 920

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 24/78 (30%), Positives = 42/78 (53%)
 Frame = -2

Query: 545 LRRIGTTVLAYVNMVSSTLRNSIPKSIVYCQVREAKRSLLDHFFTELGAREIRQLSKLLD 366
           LR +   V  YV  V ++L  ++PK++V CQV ++K  +L+  ++ + A    ++  L+ 
Sbjct: 737 LRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSISAIGNERIESLIQ 796

Query: 365 EDPAVMERRTNLAKRLEL 312
           ED  V  RR    K+  L
Sbjct: 797 EDQNVKRRRDRYQKQSSL 814

>VPS1_SCHPO (Q9URZ5) Vacuolar sorting protein 1|
          Length = 678

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = -2

Query: 524 VLAYVNMVSSTLRNSIPKSIVYCQVREAKRSLLDHFFTELGAREIRQLSKLLDEDPAVME 345
           +++Y N+V  TL + +PKSI    ++ +K  +      +L   + +   KLL E    ++
Sbjct: 599 IMSYFNIVKRTLADMVPKSISLKMIKYSKEHIQHELLEQL--YKSQAFDKLLQESEVTVQ 656

Query: 344 RRTNLAKRLE 315
           RR    + +E
Sbjct: 657 RRKECEQMVE 666

>LRC18_HUMAN (Q8N456) Leucine-rich repeat-containing protein 18|
          Length = 261

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
 Frame = -2

Query: 677 KNTLKLVDMETSYLTVDFFRKLPQDVEKGGNPSH-SIFDRYNDSYLRRIG-TTVLAYVNM 504
           K  L+L DM+   L+ +  RK+P  + K  N     +   Y D     IG  T L Y+N+
Sbjct: 44  KCILRLSDMDELDLSRNLIRKIPDSISKFQNLRWLDLHSNYIDKLPESIGQMTSLLYLNV 103

Query: 503 VSSTL-RNSIPKSIVYCQ-VREAKRSL--LDHFFTELGA----REIRQLSKLLDEDPAVM 348
            ++ L  N +P  +   + +R     L  LD   T LGA     E+     LL+  P  +
Sbjct: 104 SNNRLTSNGLPVELKQLKNIRAVNLGLNHLDSVSTTLGALKELHEVGLHDNLLNNIPVSI 163

Query: 347 ERRTNLAKRLELYRS 303
            +   L K+L + R+
Sbjct: 164 SKLPKL-KKLNIKRN 177

>YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08|
          Length = 781

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 19/82 (23%), Positives = 36/82 (43%)
 Frame = -2

Query: 524 VLAYVNMVSSTLRNSIPKSIVYCQVREAKRSLLDHFFTELGAREIRQLSKLLDEDPAVME 345
           + +Y N+    + + +PK I++  V  +K ++ +   ++L   +      LL ED  V  
Sbjct: 701 ITSYFNLTRKIIIDQVPKVIMHLLVNASKDAIQNRLVSKLYREDF--FDTLLIEDENVKS 758

Query: 344 RRTNLAKRLELYRSAQAEIDAV 279
            R    + L +Y  A   I  V
Sbjct: 759 EREKCERLLSVYNQANKIISTV 780

>APOA1_SPAAU (O42175) Apolipoprotein A-I precursor (Apo-AI) (ApoA-I)|
          Length = 260

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 15/41 (36%), Positives = 28/41 (68%)
 Frame = -2

Query: 437 RSLLDHFFTELGAREIRQLSKLLDEDPAVMERRTNLAKRLE 315
           R++LD + T++    +R +++L  +DP   E +TNLA+R+E
Sbjct: 33  RAVLDVYLTQVKDMSLRAVNQL--DDPQYAEFKTNLAQRIE 71

>LSD1_CAEEL (Q9XWP6) Probable lysine-specific histone demethylase 1 (EC|
           1.-.-.-) (Suppressor of presenilin 5) (P110b homolog)
          Length = 770

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 19/77 (24%), Positives = 37/77 (48%)
 Frame = -2

Query: 518 AYVNMVSSTLRNSIPKSIVYCQVREAKRSLLDHFFTELGAREIRQLSKLLDEDPAVMERR 339
           AY N++S   R ++ K   +C+  E      +H F ++  +++R  + + +     ME  
Sbjct: 267 AYENLLSMCERGTLIKYYNFCKSLETVARAREHHFNQM--KQLRMTALMAENQLKKMEEE 324

Query: 338 TNLAKRLELYRSAQAEI 288
            NL +   L RS + +I
Sbjct: 325 GNLEQDPVLRRSLKRDI 341

>RECQ4_HUMAN (O94761) ATP-dependent DNA helicase Q4 (EC 3.6.1.-) (RecQ|
            protein-like 4) (RecQ4) (RTS)
          Length = 1208

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 294  CLGAPVQLQPLGKVCPPLHDRGVLVEELGKLPNLSCSQLSKEMVE 428
            C G P QLQ L   CPPL     L ++L + P    S +  +MV+
Sbjct: 949  CPGGPAQLQALAHRCPPL--AVCLAQQLPEDPGQGSSSVEFDMVK 991

>SYL_TROWT (Q83GC6) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 806

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 328 PRGWSCTGAPKQRSTRLHGQNNFLWTYR 245
           P GW   G P + +   HG +  +WTYR
Sbjct: 88  PVGWDSFGLPAENAAIKHGSDPKVWTYR 115

>SYL_TROW8 (Q83HV5) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 806

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 328 PRGWSCTGAPKQRSTRLHGQNNFLWTYR 245
           P GW   G P + +   HG +  +WTYR
Sbjct: 88  PVGWDSFGLPAENAAIKHGSDPKVWTYR 115

>DBP8_ASPOR (Q2UKX3) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)|
          Length = 443

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 26/88 (29%), Positives = 44/88 (50%)
 Frame = -2

Query: 551 SYLRRIGTTVLAYVNMVSSTLRNSIPKSIVYCQVREAKRSLLDHFFTELGAREIRQLSKL 372
           +YL+   T   A+++++ ST RNS   +I++C        LL+     L  R +  L  L
Sbjct: 244 TYLKVPMTHREAFLHVLLSTERNSTKPAIIFCN-HTKTADLLERMLRRLSHR-VTSLHSL 301

Query: 371 LDEDPAVMERRTNLAKRLELYRSAQAEI 288
           L +     ER +NLA+    +R++ A I
Sbjct: 302 LPQS----ERNSNLAR----FRASAARI 321


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,731,118
Number of Sequences: 219361
Number of extensions: 2100274
Number of successful extensions: 5568
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5565
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7082949625
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)