| Clone Name | rbaal8j23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK065908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045L08, full insert sequence Length = 2303 Score = 454 bits (229), Expect = e-124 Identities = 388/440 (88%), Gaps = 2/440 (0%) Strand = Plus / Minus Query: 265 tattttgaccatgcaaccgcgtcgatctctgcttgggcgctccggtacagctccagcctc 324 ||||| |||||||||||||| || || |||||||| || ||||| || |||||||||||| Sbjct: 2014 tatttggaccatgcaaccgcatcaatttctgcttgagcactccgatatagctccagcctc 1955 Query: 325 ttggcaaggtttgtcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagt 384 || ||||| || |||||||| |||||||| |||||||| || || || ||||| |||||| Sbjct: 1954 ttcgcaagattagtcctccgttccatgacggcggggtcttcatcaagaagcttagaaagt 1895 Query: 385 tgcctaatctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcc 444 || |||||||||||||||||| ||||||||||| || ||||||| ||||||||||||| Sbjct: 1894 tgtttaatctctcttgctcccaattcagtaaagaagtgatcgagcagtgagcgctttgcc 1835 Query: 445 tcacggacttggcagtacacaatagattttgggatggagttcctcaatgttgaagatacc 504 || || ||||| ||||| ||||||||||| || || ||||||||||| |||||| ||||| Sbjct: 1834 tcccgcacttgacagtagacaatagatttcggaatagagttcctcaaggttgaacatacc 1775 Query: 505 atgttaacatatgccagaacagttgtcccaattcgtcttagataagaatcattatatctg 564 ||||||| |||||||||||| ||||| ||||||||||| ||||||||||||| ||||| Sbjct: 1774 atgttaatatatgccagaaccgttgttccaattcgtctaagataagaatcat--tatcta 1717 Query: 565 tcgaaaatagagtggcttggatttccacccttctcaacatcctgaggaagcttcctgaag 624 || ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1716 tcaaaaatagagtggcttggatttccacccttctcaacatcctggggaagtttcctgaag 1657 Query: 625 aaatctacagttaagtagcttgtttccatatcaactagctttaatgtgttcttcttgctt 684 |||||||| ||||||||||| |||||||||||| |||||||||||||| ||||||||| Sbjct: 1656 aaatctacggttaagtagctgcattccatatcaacaagctttaatgtgtttttcttgctt 1597 Query: 685 tcgtccctcattctttccaa 704 || ||||||||||| ||||| Sbjct: 1596 tcatccctcattctgtccaa 1577 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 71 agatcctcaagcacaaggagcaaaagcacaaac 103 ||||||||||||||||||| ||||||||||||| Sbjct: 2186 agatcctcaagcacaaggaacaaaagcacaaac 2154
>gb|AY104344.1| Zea mays PCO082748 mRNA sequence Length = 1812 Score = 436 bits (220), Expect = e-119 Identities = 385/440 (87%) Strand = Plus / Minus Query: 265 tattttgaccatgcaaccgcgtcgatctctgcttgggcgctccggtacagctccagcctc 324 ||||| |||||||| || || ||||| || | |||||| ||||||||||||||||||||| Sbjct: 1557 tatttggaccatgcgactgcatcgatttccgattgggcactccggtacagctccagcctc 1498 Query: 325 ttggcaaggtttgtcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagt 384 || |||||||| || || || |||||||| || || || |||||||| |||||||||||| Sbjct: 1497 tttgcaaggttagttctgcgttccatgactgctggatcttcgtcgagaagcttggaaagt 1438 Query: 385 tgcctaatctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcc 444 ||| | ||||||||||||||||| ||||| ||||| || ||||||| |||||||| ||| Sbjct: 1437 tgcttcatctctcttgctcccagttcagtgaagaagtgatcgagcagcgagcgcttggcc 1378 Query: 445 tcacggacttggcagtacacaatagattttgggatggagttcctcaatgttgaagatacc 504 || || |||||||| || ||||||||||||||||||||||||||||| || ||| | ||| Sbjct: 1377 tctcgcacttggcaataaacaatagattttgggatggagttcctcaaggtcgaacacacc 1318 Query: 505 atgttaacatatgccagaacagttgtcccaattcgtcttagataagaatcattatatctg 564 || |||||||||| |||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 1317 atattaacatatgacagaacagtttgtccaattcgtctaagataagagtcattatatcta 1258 Query: 565 tcgaaaatagagtggcttggatttccacccttctcaacatcctgaggaagcttcctgaag 624 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1257 tcaaaaatagagtggcttggatttccacccctctcaacatcctgaggaagcttcctgaag 1198 Query: 625 aaatctacagttaagtagcttgtttccatatcaactagctttaatgtgttcttcttgctt 684 |||||||| || |||||||| |||||| ||||||||||||||||| || ||||||||| Sbjct: 1197 aaatctactgtcaagtagctgcattccatgtcaactagctttaatgtatttttcttgctt 1138 Query: 685 tcgtccctcattctttccaa 704 || ||||||||||| ||||| Sbjct: 1137 tcatccctcattctatccaa 1118
>gb|BT017132.1| Zea mays clone EL01N0365G02.c mRNA sequence Length = 1266 Score = 389 bits (196), Expect = e-105 Identities = 379/440 (86%) Strand = Plus / Minus Query: 265 tattttgaccatgcaaccgcgtcgatctctgcttgggcgctccggtacagctccagcctc 324 ||||| ||||||||||| || || || || | |||||| |||||||||||||| |||||| Sbjct: 1029 tatttggaccatgcaacggcatcaatttcggattgggcactccggtacagctcgagcctc 970 Query: 325 ttggcaaggtttgtcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagt 384 || |||||||| || || || |||||||| || ||||| ||||| || || |||||||| Sbjct: 969 tttgcaaggttagttctgcgttccatgactgctgggtcttcgtcaagaagtttggaaagc 910 Query: 385 tgcctaatctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcc 444 ||| | |||||||||||||| || ||||| ||||| || ||||||| |||||||| | Sbjct: 909 tgcttcatctctcttgctccaagttcagtgaagaagtgatcgagcagcgagcgcttgcct 850 Query: 445 tcacggacttggcagtacacaatagattttgggatggagttcctcaatgttgaagatacc 504 || || ||||| || || ||||||||||||||||||||||||||||| || ||| | ||| Sbjct: 849 tctcgcacttgacaataaacaatagattttgggatggagttcctcaaggtcgaacacacc 790 Query: 505 atgttaacatatgccagaacagttgtcccaattcgtcttagataagaatcattatatctg 564 || |||||||||| |||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 789 atattaacatatgacagaacagtttgtccaattcgtctaagataagagtcattatatcta 730 Query: 565 tcgaaaatagagtggcttggatttccacccttctcaacatcctgaggaagcttcctgaag 624 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 tcaaaaatagagtggcttggatttccacccttctcaacatcctgaggaagcttcctgaag 670 Query: 625 aaatctacagttaagtagcttgtttccatatcaactagctttaatgtgttcttcttgctt 684 |||||||| || |||||||| |||||| ||||||||||||||||| || ||||||||| Sbjct: 669 aaatctactgtcaagtagctgcattccatgtcaactagctttaatgtatttttcttgctt 610 Query: 685 tcgtccctcattctttccaa 704 || ||||||||||| ||||| Sbjct: 609 tcatccctcattctatccaa 590 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gagatcctcaagcacaagga 89 |||||||||||||||||||| Sbjct: 1183 gagatcctcaagcacaagga 1164
>ref|NM_192052.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1935 Score = 293 bits (148), Expect = 4e-76 Identities = 328/388 (84%) Strand = Plus / Minus Query: 278 caaccgcgtcgatctctgcttgggcgctccggtacagctccagcctcttggcaaggtttg 337 ||||||| ||||| ||||| ||||||||||| || || |||| ||||||||| ||||| | Sbjct: 1921 caaccgcatcgatttctgcctgggcgctccgatatagttccaacctcttggcgaggttag 1862 Query: 338 tcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagttgcctaatctctc 397 || |||||||| ||||||||||| || || || ||||| |||| ||| | ||||||| Sbjct: 1861 ctctacgctccatcaccgcggggtcttcatcaagaagcttagaaatgtgcttgatctctc 1802 Query: 398 ttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggacttggc 457 ||||||||| || |||||||| | |||||||||| |||||||||||| |||||||||| Sbjct: 1801 ttgctcccaattctgtaaagaagcgatcgagcaatgtgcgctttgcctcccggacttggc 1742 Query: 458 agtacacaatagattttgggatggagttcctcaatgttgaagataccatgttaacatatg 517 | || ||||||||||| ||||||||||| ||||| ||||| ||||||| || ||||||| Sbjct: 1741 aataaacaatagatttagggatggagtttctcaagcttgaacataccatattgacatatg 1682 Query: 518 ccagaacagttgtcccaattcgtcttagataagaatcattatatctgtcgaaaatagagt 577 |||||||| | || | ||||||||| || || |||||||| |||||||| |||||||||| Sbjct: 1681 ccagaacattagtactaattcgtctaaggtatgaatcattgtatctgtcaaaaatagagt 1622 Query: 578 ggcttggatttccacccttctcaacatcctgaggaagcttcctgaagaaatctacagtta 637 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1621 ttgttggatttccacccttctcaacatcctgaggaagcttccaaaagaaatcaacagtta 1562 Query: 638 agtagcttgtttccatatcaactagctt 665 | ||||| ||||||||||| ||||| Sbjct: 1561 aatagctgcactccatatcaaccagctt 1534
>dbj|AK072230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002D21, full insert sequence Length = 2691 Score = 293 bits (148), Expect = 4e-76 Identities = 328/388 (84%) Strand = Plus / Minus Query: 278 caaccgcgtcgatctctgcttgggcgctccggtacagctccagcctcttggcaaggtttg 337 ||||||| ||||| ||||| ||||||||||| || || |||| ||||||||| ||||| | Sbjct: 2523 caaccgcatcgatttctgcctgggcgctccgatatagttccaacctcttggcgaggttag 2464 Query: 338 tcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagttgcctaatctctc 397 || |||||||| ||||||||||| || || || ||||| |||| ||| | ||||||| Sbjct: 2463 ctctacgctccatcaccgcggggtcttcatcaagaagcttagaaatgtgcttgatctctc 2404 Query: 398 ttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggacttggc 457 ||||||||| || |||||||| | |||||||||| |||||||||||| |||||||||| Sbjct: 2403 ttgctcccaattctgtaaagaagcgatcgagcaatgtgcgctttgcctcccggacttggc 2344 Query: 458 agtacacaatagattttgggatggagttcctcaatgttgaagataccatgttaacatatg 517 | || ||||||||||| ||||||||||| ||||| ||||| ||||||| || ||||||| Sbjct: 2343 aataaacaatagatttagggatggagtttctcaagcttgaacataccatattgacatatg 2284 Query: 518 ccagaacagttgtcccaattcgtcttagataagaatcattatatctgtcgaaaatagagt 577 |||||||| | || | ||||||||| || || |||||||| |||||||| |||||||||| Sbjct: 2283 ccagaacattagtactaattcgtctaaggtatgaatcattgtatctgtcaaaaatagagt 2224 Query: 578 ggcttggatttccacccttctcaacatcctgaggaagcttcctgaagaaatctacagtta 637 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 2223 ttgttggatttccacccttctcaacatcctgaggaagcttccaaaagaaatcaacagtta 2164 Query: 638 agtagcttgtttccatatcaactagctt 665 | ||||| ||||||||||| ||||| Sbjct: 2163 aatagctgcactccatatcaaccagctt 2136
>ref|XM_475890.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1623 Score = 240 bits (121), Expect = 5e-60 Identities = 160/173 (92%) Strand = Plus / Minus Query: 532 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 591 ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 1562 ccaattcgtctaagataagaatcattatatctatcaaaaatagagtggcttggatttcca 1503 Query: 592 cccttctcaacatcctgaggaagcttcctgaagaaatctacagttaagtagcttgtttcc 651 ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 1502 cccttctcaacatcctggggaagtttcctgaagaaatctacggttaagtagctgcattcc 1443 Query: 652 atatcaactagctttaatgtgttcttcttgctttcgtccctcattctttccaa 704 |||||||| |||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 1442 atatcaacaagctttaatgtgtttttcttgctttcatccctcattctgtccaa 1390
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 240 bits (121), Expect = 5e-60 Identities = 160/173 (92%) Strand = Plus / Plus Query: 532 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 591 ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 24827 ccaattcgtctaagataagaatcattatatctatcaaaaatagagtggcttggatttcca 24886 Query: 592 cccttctcaacatcctgaggaagcttcctgaagaaatctacagttaagtagcttgtttcc 651 ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 24887 cccttctcaacatcctggggaagtttcctgaagaaatctacggttaagtagctgcattcc 24946 Query: 652 atatcaactagctttaatgtgttcttcttgctttcgtccctcattctttccaa 704 |||||||| |||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 24947 atatcaacaagctttaatgtgtttttcttgctttcatccctcattctgtccaa 24999 Score = 147 bits (74), Expect = 6e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 393 ctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggac 452 |||||||||||||| ||||||||||| || ||||||| ||||||||||||||| || || Sbjct: 24451 ctctcttgctcccaattcagtaaagaagtgatcgagcagtgagcgctttgcctcccgcac 24510 Query: 453 ttggcagtacacaatagattttgggatggagttcctcaatgttgaagataccatgttaac 512 ||| ||||| ||||||||||| || || ||||||||||| |||||| |||||||||||| Sbjct: 24511 ttgacagtagacaatagatttcggaatagagttcctcaaggttgaacataccatgttaat 24570 Query: 513 atatgccagaacagttgt 530 |||||||||||| ||||| Sbjct: 24571 atatgccagaaccgttgt 24588 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Plus Query: 265 tattttgaccatgcaaccgcgtcgatctctgcttgggcgctccggtacagctccagcctc 324 ||||| |||||||||||||| || || |||||||| || ||||| || |||||||||||| Sbjct: 24187 tatttggaccatgcaaccgcatcaatttctgcttgagcactccgatatagctccagcctc 24246 Query: 325 ttggcaaggtttgtcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagt 384 || ||||| || |||||||| |||||||| |||||||| || || || ||||| |||||| Sbjct: 24247 ttcgcaagattagtcctccgttccatgacggcggggtcttcatcaagaagcttagaaagt 24306 Query: 385 tg 386 || Sbjct: 24307 tg 24308 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 71 agatcctcaagcacaaggagcaaaagcacaaac 103 ||||||||||||||||||| ||||||||||||| Sbjct: 24015 agatcctcaagcacaaggaacaaaagcacaaac 24047
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 240 bits (121), Expect = 5e-60 Identities = 160/173 (92%) Strand = Plus / Plus Query: 532 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 591 ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 27428697 ccaattcgtctaagataagaatcattatatctatcaaaaatagagtggcttggatttcca 27428756 Query: 592 cccttctcaacatcctgaggaagcttcctgaagaaatctacagttaagtagcttgtttcc 651 ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 27428757 cccttctcaacatcctggggaagtttcctgaagaaatctacggttaagtagctgcattcc 27428816 Query: 652 atatcaactagctttaatgtgttcttcttgctttcgtccctcattctttccaa 704 |||||||| |||||||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 27428817 atatcaacaagctttaatgtgtttttcttgctttcatccctcattctgtccaa 27428869 Score = 147 bits (74), Expect = 6e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 393 ctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggac 452 |||||||||||||| ||||||||||| || ||||||| ||||||||||||||| || || Sbjct: 27428321 ctctcttgctcccaattcagtaaagaagtgatcgagcagtgagcgctttgcctcccgcac 27428380 Query: 453 ttggcagtacacaatagattttgggatggagttcctcaatgttgaagataccatgttaac 512 ||| ||||| ||||||||||| || || ||||||||||| |||||| |||||||||||| Sbjct: 27428381 ttgacagtagacaatagatttcggaatagagttcctcaaggttgaacataccatgttaat 27428440 Query: 513 atatgccagaacagttgt 530 |||||||||||| ||||| Sbjct: 27428441 atatgccagaaccgttgt 27428458 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Plus Query: 265 tattttgaccatgcaaccgcgtcgatctctgcttgggcgctccggtacagctccagcctc 324 ||||| |||||||||||||| || || |||||||| || ||||| || |||||||||||| Sbjct: 27428057 tatttggaccatgcaaccgcatcaatttctgcttgagcactccgatatagctccagcctc 27428116 Query: 325 ttggcaaggtttgtcctccgctccatgaccgcggggtcctcgtcgaggagcttggaaagt 384 || ||||| || |||||||| |||||||| |||||||| || || || ||||| |||||| Sbjct: 27428117 ttcgcaagattagtcctccgttccatgacggcggggtcttcatcaagaagcttagaaagt 27428176 Query: 385 tg 386 || Sbjct: 27428177 tg 27428178 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 71 agatcctcaagcacaaggagcaaaagcacaaac 103 ||||||||||||||||||| ||||||||||||| Sbjct: 27427885 agatcctcaagcacaaggaacaaaagcacaaac 27427917
>gb|AY463019.1| Musa acuminata putative phragmoplastin 5 mRNA, partial cds Length = 509 Score = 153 bits (77), Expect = 9e-34 Identities = 149/173 (86%) Strand = Plus / Minus Query: 403 cccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggacttggcagtac 462 |||| ||||||||||||||| || ||||| ||||| || ||||| || ||||| ||||| Sbjct: 193 cccaactcagtaaagaaatgatcaagcaaggagcgtttagcctctcgcacttgacagtaa 134 Query: 463 acaatagattttgggatggagttcctcaatgttgaagataccatgttaacatatgccaga 522 |||||||| |||||||||||||||| ||| ||||| |||||||||| |||||||||||| Sbjct: 133 acaatagactttgggatggagttccgcaagcttgaacataccatgttgacatatgccaga 74 Query: 523 acagttgtcccaattcgtcttagataagaatcattatatctgtcgaaaataga 575 |||||||| || || ||||| |||||||| ||||| ||||| || |||||||| Sbjct: 73 acagttgttcctatacgtctgagataagagtcattgtatctatcaaaaataga 21
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 129 bits (65), Expect = 1e-26 Identities = 116/133 (87%) Strand = Plus / Minus Query: 393 ctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggac 452 |||||||||||||| || |||||||| | |||||||||| |||||||||||| ||||| Sbjct: 28053097 ctctcttgctcccaattctgtaaagaagcgatcgagcaatgtgcgctttgcctcccggac 28053038 Query: 453 ttggcagtacacaatagattttgggatggagttcctcaatgttgaagataccatgttaac 512 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||||| || || Sbjct: 28053037 ttggcaataaacaatagatttagggatggagtttctcaagcttgaacataccatattgac 28052978 Query: 513 atatgccagaaca 525 ||||||||||||| Sbjct: 28052977 atatgccagaaca 28052965 Score = 127 bits (64), Expect = 5e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 534 aattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccacc 593 ||||||||| || || |||||||| |||||||| |||||||||| ||||||||||||| Sbjct: 28052734 aattcgtctaaggtatgaatcattgtatctgtcaaaaatagagtttgttggatttccacc 28052675 Query: 594 cttctcaacatcctgaggaagcttcctgaagaaatctacagttaagtagcttgtttccat 653 |||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 28052674 cttctcaacatcctgaggaagcttccaaaagaaatcaacagttaaatagctgcactccat 28052615 Query: 654 atcaactagctt 665 |||||| ||||| Sbjct: 28052614 atcaaccagctt 28052603 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 278 caaccgcgtcgatctctgcttgggcgctccggtacagctccagcctcttggcaaggtttg 337 ||||||| ||||| ||||| ||||||||||| || || |||| ||||||||| ||||| | Sbjct: 28053685 caaccgcatcgatttctgcctgggcgctccgatatagttccaacctcttggcgaggttag 28053626 Query: 338 tcctccgctccatgaccgcggggtc 362 || |||||||| ||||||||||| Sbjct: 28053625 ctctacgctccatcaccgcggggtc 28053601
>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0019E03 Length = 152092 Score = 129 bits (65), Expect = 1e-26 Identities = 116/133 (87%) Strand = Plus / Minus Query: 393 ctctcttgctcccagctcagtaaagaaatggtcgagcaatgagcgctttgcctcacggac 452 |||||||||||||| || |||||||| | |||||||||| |||||||||||| ||||| Sbjct: 68296 ctctcttgctcccaattctgtaaagaagcgatcgagcaatgtgcgctttgcctcccggac 68237 Query: 453 ttggcagtacacaatagattttgggatggagttcctcaatgttgaagataccatgttaac 512 |||||| || ||||||||||| ||||||||||| ||||| ||||| ||||||| || || Sbjct: 68236 ttggcaataaacaatagatttagggatggagtttctcaagcttgaacataccatattgac 68177 Query: 513 atatgccagaaca 525 ||||||||||||| Sbjct: 68176 atatgccagaaca 68164 Score = 127 bits (64), Expect = 5e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 534 aattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccacc 593 ||||||||| || || |||||||| |||||||| |||||||||| ||||||||||||| Sbjct: 67933 aattcgtctaaggtatgaatcattgtatctgtcaaaaatagagtttgttggatttccacc 67874 Query: 594 cttctcaacatcctgaggaagcttcctgaagaaatctacagttaagtagcttgtttccat 653 |||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 67873 cttctcaacatcctgaggaagcttccaaaagaaatcaacagttaaatagctgcactccat 67814 Query: 654 atcaactagctt 665 |||||| ||||| Sbjct: 67813 atcaaccagctt 67802 Score = 65.9 bits (33), Expect = 2e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 278 caaccgcgtcgatctctgcttgggcgctccggtacagctccagcctcttggcaaggtttg 337 ||||||| ||||| ||||| ||||||||||| || || |||| ||||||||| ||||| | Sbjct: 68884 caaccgcatcgatttctgcctgggcgctccgatatagttccaacctcttggcgaggttag 68825 Query: 338 tcctccgctccatgaccgcggggtc 362 || |||||||| ||||||||||| Sbjct: 68824 ctctacgctccatcaccgcggggtc 68800
>gb|U36430.1|GMU36430 Glycine max dynamin-like protein SDL5A mRNA, complete cds Length = 2134 Score = 87.7 bits (44), Expect = 5e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 532 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 591 |||||||| |||||||| |||||||||||||| || ||||| || || | ||||| ||| Sbjct: 1691 ccaattcgccttagatatgaatcattatatctatcaaaaattgaatgtgtgggattgcca 1632 Query: 592 cccttctcaacatcctgaggaagcttcctgaagaaatctacagt 635 ||||| |||||||| ||||||||||||| |||||||| ||||| Sbjct: 1631 cccttatcaacatcttgaggaagcttccgaaagaaatcaacagt 1588
>ref|NM_180789.1| Arabidopsis thaliana ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding AT5G42080 (ADL1) transcript variant AT5G42080.1 mRNA, complete cds Length = 2427 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 535 attcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccaccc 594 |||||||| ||||| ||||| || || | ||||||||| ||||| | || || |||||| Sbjct: 1779 attcgtctgagataggaatcgttgtagcggtcgaaaatggagtgtgtggggttaccaccc 1720 Query: 595 ttctcaacatcctgaggaagcttcctgaagaaatctacagt 635 |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 1719 ttctcaacatcctggggaagtttcctgaagaaatcaacagt 1679
>gb|BT001063.1| Arabidopsis thaliana At5g42080/MJC20_19 mRNA, complete cds Length = 1833 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 535 attcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccaccc 594 |||||||| ||||| ||||| || || | ||||||||| ||||| | || || |||||| Sbjct: 1562 attcgtctgagataggaatcgttgtagcggtcgaaaatggagtgtgtggggttaccaccc 1503 Query: 595 ttctcaacatcctgaggaagcttcctgaagaaatctacagt 635 |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 1502 ttctcaacatcctggggaagtttcctgaagaaatcaacagt 1462
>gb|AY094408.1| Arabidopsis thaliana AT5g42080/MJC20_19 mRNA, complete cds Length = 2269 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 535 attcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccaccc 594 |||||||| ||||| ||||| || || | ||||||||| ||||| | || || |||||| Sbjct: 1779 attcgtctgagataggaatcgttgtagcggtcgaaaatggagtgtgtggggttaccaccc 1720 Query: 595 ttctcaacatcctgaggaagcttcctgaagaaatctacagt 635 |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 1719 ttctcaacatcctggggaagtttcctgaagaaatcaacagt 1679
>dbj|AB017067.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJC20 Length = 83689 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 535 attcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccaccc 594 |||||||| ||||| ||||| || || | ||||||||| ||||| | || || |||||| Sbjct: 43323 attcgtctgagataggaatcgttgtagcggtcgaaaatggagtgtgtggggttaccaccc 43382 Query: 595 ttctcaacatcctgaggaagcttcctgaagaaatctacagt 635 |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 43383 ttctcaacatcctggggaagtttcctgaagaaatcaacagt 43423
>gb|L36939.1|ATHDYNAGTP Arabidopsis thaliana dynamin-like GTP binding protein mRNA, complete cds Length = 2160 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 535 attcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccaccc 594 |||||||| ||||| ||||| || || | ||||||||| ||||| | || || |||||| Sbjct: 1659 attcgtctgagataggaatcgttgtagcggtcgaaaatggagtgtgtggggttaccaccc 1600 Query: 595 ttctcaacatcctgaggaagcttcctgaagaaatctacagt 635 |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 1599 ttctcaacatcctggggaagtttcctgaagaaatcaacagt 1559
>gb|L38614.1|ATHGTPBPA Arabidopsis thaliana GTP-binding protein mRNA, complete cds Length = 2234 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 535 attcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttccaccc 594 |||||||| ||||| ||||| || || | ||||||||| ||||| | || || |||||| Sbjct: 1768 attcgtctgagataggaatcgttgtagcggtcgaaaatggagtgtgtggggttaccaccc 1709 Query: 595 ttctcaacatcctgaggaagcttcctgaagaaatctacagt 635 |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 1708 ttctcaacatcctggggaagtttcctgaagaaatcaacagt 1668
>emb|AJ244024.1|NTA244024 Nicotiana tabacum mRNA for phragmoplastin, dynamin-like protein Length = 2193 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 544 agataagaatcattatatctgtcgaaaatagagtggcttggatttccacccttctcaaca 603 ||||| ||||||||||| | ||| ||||| || || |||||||||| |||||||||| | Sbjct: 1663 agataggaatcattataccggtcaaaaattgaatgtgttggatttcctcccttctcaata 1604 Query: 604 tcctgaggaagcttcctgaagaaatctacagt 635 || |||||||| |||| ||||||||||||||| Sbjct: 1603 tcttgaggaagtttccggaagaaatctacagt 1572
>gb|U25547.1|GMU25547 Glycine max dynamin-like protein SDL12A mRNA, complete cds Length = 2211 Score = 79.8 bits (40), Expect = 1e-11 Identities = 88/104 (84%) Strand = Plus / Minus Query: 532 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 591 |||||||| |||||||| |||||||||||||| || |||| || || | ||||| ||| Sbjct: 1739 ccaattcgccttagatatgaatcattatatctatcacaaattgaatgtgtgggattgcca 1680 Query: 592 cccttctcaacatcctgaggaagcttcctgaagaaatctacagt 635 ||||| |||||||| ||||||||||||| |||||||| ||||| Sbjct: 1679 cccttatcaacatcttgaggaagcttccgaaagaaatcaacagt 1636
>dbj|AP004493.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT08D16, TM0025b, complete sequence Length = 36100 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 532 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 591 |||||||| |||||||| |||||||||||||| || ||||| || || | ||||| ||| Sbjct: 33445 ccaattcgccttagatatgaatcattatatctatcaaaaattgaatgtgtgggattgcca 33386 Query: 592 cccttctcaacatcctgaggaagcttcctgaagaaatc 629 ||||| || ||||| ||||||||||||| |||||||| Sbjct: 33385 cccttatctacatcttgaggaagcttccgaaagaaatc 33348
>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence Length = 113622 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 532 ccaattcgtcttagataagaatcattatatctgtcgaaaatagagtggcttggatttcca 591 |||||||| || ||||| |||||||||||||| || ||||| || || | ||||| ||| Sbjct: 27065 ccaattcgcctaagatatgaatcattatatctatcaaaaattgaatgtgtaggattgcca 27124 Query: 592 cccttctcaacatcctgaggaag 614 ||||| || ||||| |||||||| Sbjct: 27125 cccttgtctacatcttgaggaag 27147
>ref|NM_116041.2| Arabidopsis thaliana GTP binding / GTPase AT3G61760 mRNA, complete cds Length = 1926 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 439 tttgcctcacggacttggcagtacacaatagattttgggatggagttcctcaa 491 ||||| ||||||||||| ||||| ||||| ||||| || |||||||| ||||| Sbjct: 1719 tttgcttcacggacttgacagtaaacaatggatttcggtatggagtttctcaa 1667
>emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, BAC clone F21F14 Length = 142001 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 439 tttgcctcacggacttggcagtacacaatagattttgggatggagttcctcaa 491 ||||| ||||||||||| ||||| ||||| ||||| || |||||||| ||||| Sbjct: 23492 tttgcttcacggacttgacagtaaacaatggatttcggtatggagtttctcaa 23544
>emb|AL132959.1|ATF15G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F15G16 Length = 104868 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Plus Query: 439 tttgcctcacggacttggcagtacacaatagattttgggatggagttcctcaa 491 ||||| ||||||||||| ||||| ||||| ||||| || |||||||| ||||| Sbjct: 72180 tttgcttcacggacttgacagtaaacaatggatttcggtatggagtttctcaa 72232
>gb|AY189279.1| Arabidopsis thaliana dynamin-like protein B mRNA, complete cds Length = 1926 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 439 tttgcctcacggacttggcagtacacaatagattttgggatggagttcctcaa 491 ||||| ||||||||||| ||||| ||||| ||||| || |||||||| ||||| Sbjct: 1719 tttgcttcacggacttgacagtaaacaatggatttcggtatggagtttctcaa 1667
>gb|AC102608.14| Mus musculus chromosome 3, clone RP23-402L6, complete sequence Length = 185014 Score = 42.1 bits (21), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 tagtagnagagagagagatcctca 79 |||||| ||||||||||||||||| Sbjct: 173722 tagtagcagagagagagatcctca 173699
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 ccgcggggtcctcgtcgaggagct 376 ||||| |||||||||||||||||| Sbjct: 138629 ccgcgtggtcctcgtcgaggagct 138652
>ref|XM_510247.1| PREDICTED: Pan troglodytes LOC453257 (LOC453257), mRNA Length = 4481 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 ggtacagctccagcctcttg 327 |||||||||||||||||||| Sbjct: 3079 ggtacagctccagcctcttg 3060
>ref|XM_520335.1| PREDICTED: Pan troglodytes similar to General transcription factor 3C polypeptide 5 (Transcription factor IIIC-epsilon subunit) (TF3C-epsilon) (TFIIIC 63 kDa subunit) (TFIIIC63) (LOC464820), mRNA Length = 2528 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gtacagctccagcctcttgg 328 |||||||||||||||||||| Sbjct: 512 gtacagctccagcctcttgg 493
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 agcaaaagcacaaacacatg 108 |||||||||||||||||||| Sbjct: 1093704 agcaaaagcacaaacacatg 1093685
>gb|AC159430.1| Trypanosoma brucei chromosome 3 clone RPCI93-28C22, complete sequence Length = 142068 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 agcaaaagcacaaacacatg 108 |||||||||||||||||||| Sbjct: 53873 agcaaaagcacaaacacatg 53892
>gb|AY694189.1| Camellia sinensis phragmoplastin mRNA, partial cds Length = 434 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 tcagtaaagaaatggtcgag 428 |||||||||||||||||||| Sbjct: 77 tcagtaaagaaatggtcgag 58
>gb|AY881693.1| Baboon herpesvirus 2 strain 860 ICP22 (US1), US2 (US2), protein kinase (US3), glycoprotein G (US4), glycoprotein J (US5), glycoprotein D (US6), glycoprotein I (US7), glycoprotein E (US8), US8.5 (US8.5), US9 (US9), US10 (US10), tegument protein (US11), and ICP47 (US12) genes, complete cds Length = 15072 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 ccgcggggtcctcgtcgaggagct 376 ||||| |||||||||||||||||| Sbjct: 9097 ccgcgtggtcctcgtcgaggagct 9120
>gb|BC017337.2| Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa, mRNA (cDNA clone MGC:29524 IMAGE:4872395), complete cds Length = 2397 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gtacagctccagcctcttgg 328 |||||||||||||||||||| Sbjct: 449 gtacagctccagcctcttgg 430
>ref|NM_004667.3| Homo sapiens hect domain and RLD 2 (HERC2), mRNA Length = 15351 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 ggtacagctccagcctcttg 327 |||||||||||||||||||| Sbjct: 3582 ggtacagctccagcctcttg 3563
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 gaccatgcaaccgcgtcgat 290 |||||||||||||||||||| Sbjct: 3342464 gaccatgcaaccgcgtcgat 3342483
>ref|NM_012087.1| Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa (GTF3C5), mRNA Length = 2385 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gtacagctccagcctcttgg 328 |||||||||||||||||||| Sbjct: 481 gtacagctccagcctcttgg 462
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 gaccatgcaaccgcgtcgat 290 |||||||||||||||||||| Sbjct: 2784198 gaccatgcaaccgcgtcgat 2784179
>gb|BC011355.1| Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa, mRNA (cDNA clone MGC:18246 IMAGE:4157684), complete cds Length = 2388 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gtacagctccagcctcttgg 328 |||||||||||||||||||| Sbjct: 470 gtacagctccagcctcttgg 451
>gb|L14730.1| Caenorhabditis elegans cosmid C13G5, complete sequence Length = 10883 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 gtacagcagaaaggtgtccc 53 |||||||||||||||||||| Sbjct: 5608 gtacagcagaaaggtgtccc 5589
>gb|BC030157.2| Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa, mRNA (cDNA clone IMAGE:4561538), partial cds Length = 2099 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gtacagctccagcctcttgg 328 |||||||||||||||||||| Sbjct: 184 gtacagctccagcctcttgg 165
>emb|BX936390.7| Zebrafish DNA sequence from clone DKEY-6E2 in linkage group 6, complete sequence Length = 168226 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 41707 aacatatgccagaacagttg 41726
>emb|AL732366.7| Human DNA sequence from clone RP11-393H10 on chromosome X Contains a novel gene (FLJ14503), the EIF1A gene for eukaryotic translation initiation factor 1A (EIF4C, EIF1AX, eIF-1A, eIF-4C), the 3' end of the RPS6KA3 gene for ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RSK, HU-2, HU-3, RSK2, MRX19, ISPK-1, MAPKAPK1B), a novel gene and three CpG islands, complete sequence Length = 187275 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tctggcaaaggggagagatg 206 |||||||||||||||||||| Sbjct: 68769 tctggcaaaggggagagatg 68788
>emb|AL359643.27| Human DNA sequence from clone RP11-428J1 on chromosome 6 Contains the CDYL gene for a Y chromosome-like chromodomain protein, a ribosomal protein S18 (RPS18) pseudogene, the gene for ribonuclease P 40kD subunit (RPP40) and CpG islands, complete sequence Length = 166863 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 612 aagcttcctgaagaaatcta 631 |||||||||||||||||||| Sbjct: 49791 aagcttcctgaagaaatcta 49810
>emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3 Contains the GTF3C5 gene for general transcription factor IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester lipase (bile salt-stimulated lipase), the CELP gene for carboxyl ester lipase pseudogene, the RALGDS gene for ral guanine nucleotide dissociation stimulator, the gene for Forssman glycolipid synthetase (FS), three novel genes and six CpG islands, complete sequence Length = 152863 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gtacagctccagcctcttgg 328 |||||||||||||||||||| Sbjct: 20931 gtacagctccagcctcttgg 20912
>emb|AL137220.8| Human DNA sequence from clone RP11-354I10 on chromosome 6 Contains a novel gene and a CpG island, complete sequence Length = 126482 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 gaaagttgcctaatctctct 398 |||||||||||||||||||| Sbjct: 11352 gaaagttgcctaatctctct 11371
>emb|BX465208.18| Zebrafish DNA sequence from clone DKEYP-91H6 in linkage group 6, complete sequence Length = 187635 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tgtcatctaataagaatata 145 |||||||||||||||||||| Sbjct: 84511 tgtcatctaataagaatata 84492
>emb|BX569792.15| Zebrafish DNA sequence from clone CH211-197I17 in linkage group 16, complete sequence Length = 234579 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 92796 aacatatgccagaacagttg 92777
>emb|BX950223.8| Zebrafish DNA sequence from clone CH211-29N12 in linkage group 5, complete sequence Length = 54944 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 26737 aacatatgccagaacagttg 26756
>emb|BX571688.3| Zebrafish DNA sequence from clone DKEY-200H23, complete sequence Length = 181466 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 2397 aacatatgccagaacagttg 2378
>dbj|AB232136.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:X313 Length = 5232 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 ccgcggggtcctcgtcgaggagct 376 ||||| |||||||||||||||||| Sbjct: 1651 ccgcgtggtcctcgtcgaggagct 1674
>dbj|AB232135.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:OU2-5 Length = 5248 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 ccgcggggtcctcgtcgaggagct 376 ||||| |||||||||||||||||| Sbjct: 1655 ccgcgtggtcctcgtcgaggagct 1678
>dbj|AB232134.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:OU1-76 Length = 5238 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 ccgcggggtcctcgtcgaggagct 376 ||||| |||||||||||||||||| Sbjct: 1648 ccgcgtggtcctcgtcgaggagct 1671
>dbj|AB232132.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:A951 Length = 5227 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 ccgcggggtcctcgtcgaggagct 376 ||||| |||||||||||||||||| Sbjct: 1654 ccgcgtggtcctcgtcgaggagct 1677
>emb|CR376753.8| Zebrafish DNA sequence from clone DKEY-182P15 in linkage group 20, complete sequence Length = 214807 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tgtcatctaataagaatata 145 |||||||||||||||||||| Sbjct: 68207 tgtcatctaataagaatata 68188
>dbj|AK055092.1| Homo sapiens cDNA FLJ30530 fis, clone BRAWH2001092, highly similar to Homo sapiens transcription factor IIIC63 mRNA Length = 2380 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gtacagctccagcctcttgg 328 |||||||||||||||||||| Sbjct: 488 gtacagctccagcctcttgg 469
>gb|AC023283.10| Homo sapiens chromosome 10 clone RP11-539I5, complete sequence Length = 218074 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ggaaagttgcctaatctctc 397 |||||||||||||||||||| Sbjct: 84751 ggaaagttgcctaatctctc 84732
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 gctccggtacagctccagcc 322 |||||||||||||||||||| Sbjct: 48638 gctccggtacagctccagcc 48619
>gb|AF397994.1|AF397994 Cyprinodon nevadensis mionectes microsatellite AC1 sequence Length = 441 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 674 tcttcttgctttcgtccctcattctttc 701 ||||||| ||||| |||||||||||||| Sbjct: 393 tcttctttctttcctccctcattctttc 366
>gb|AF449714.1|AF449714 Cercopithecine herpesvirus 2 unique short region, partial sequence Length = 9811 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 ccgcggggtcctcgtcgaggagct 376 ||||| |||||||||||||||||| Sbjct: 5580 ccgcgtggtcctcgtcgaggagct 5603
>gb|AC017091.8| Homo sapiens BAC clone RP11-506N2 from 4, complete sequence Length = 201536 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 caaaggggagagatgtcacc 211 |||||||||||||||||||| Sbjct: 39527 caaaggggagagatgtcacc 39546
>emb|BX571765.6| Zebrafish DNA sequence from clone DKEYP-77G7 in linkage group 23, complete sequence Length = 147933 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 83894 aacatatgccagaacagttg 83913
>emb|BX088600.12| Zebrafish DNA sequence from clone DKEY-166M7 in linkage group 16, complete sequence Length = 192992 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 120429 aacatatgccagaacagttg 120410
>emb|BX323090.7| Zebrafish DNA sequence from clone CH211-274B7 in linkage group 1, complete sequence Length = 166353 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 104922 aacatatgccagaacagttg 104903
>emb|BX296541.5| Zebrafish DNA sequence from clone CH211-278P9, complete sequence Length = 157802 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 5584 aacatatgccagaacagttg 5603
>emb|BX248521.12| Zebrafish DNA sequence from clone CH211-243C14 in linkage group 23, complete sequence Length = 144888 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 79844 aacatatgccagaacagttg 79825
>emb|BX321872.10| Zebrafish DNA sequence from clone CH211-281K19 in linkage group 10, complete sequence Length = 78006 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 64752 aacatatgccagaacagttg 64733
>gb|AC023826.6| Homo sapiens chromosome 16 clone RP11-380E14, complete sequence Length = 196755 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 gctcagtaaagaaatggtcg 426 |||||||||||||||||||| Sbjct: 55381 gctcagtaaagaaatggtcg 55362
>gb|AF443185.2| Paracoccidioides brasiliensis transcriptional repressor Sin3p (SIN3) gene, complete cds Length = 11093 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ggcaaaggggagagatgtca 209 |||||||||||||||||||| Sbjct: 2340 ggcaaaggggagagatgtca 2321
>gb|AC008067.3| Homo sapiens BAC clone RP11-303I4 from 2, complete sequence Length = 151242 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 cagaacagttgtcccaattc 538 |||||||||||||||||||| Sbjct: 111616 cagaacagttgtcccaattc 111597
>gb|AC007597.3|AC007597 Homo sapiens chromosome 16 clone RP11-137H10, complete sequence Length = 192814 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 gctcagtaaagaaatggtcg 426 |||||||||||||||||||| Sbjct: 19796 gctcagtaaagaaatggtcg 19815
>gb|AY007123.1| Homo sapiens clone CDABP0017 mRNA sequence Length = 2079 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gtacagctccagcctcttgg 328 |||||||||||||||||||| Sbjct: 190 gtacagctccagcctcttgg 171
>gb|AC126332.9| Homo sapiens chromosome 15, clone RP11-665A22, complete sequence Length = 161099 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 ggtacagctccagcctcttg 327 |||||||||||||||||||| Sbjct: 95041 ggtacagctccagcctcttg 95060
>gb|AC175464.1| Mus musculus BAC clone RP23-129E4 from chromosome 16, complete sequence Length = 224605 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 agcttcctgaagaaatctac 632 |||||||||||||||||||| Sbjct: 16453 agcttcctgaagaaatctac 16434
>emb|AL935280.12| Zebrafish DNA sequence from clone DKEY-261J4, complete sequence Length = 221563 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 aagcacaaggagcaaaagca 98 |||||||||||||||||||| Sbjct: 182680 aagcacaaggagcaaaagca 182661
>dbj|AK000194.1| Homo sapiens cDNA FLJ20187 fis, clone COLF0433 Length = 1927 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gtacagctccagcctcttgg 328 |||||||||||||||||||| Sbjct: 201 gtacagctccagcctcttgg 182
>gb|AF071172.3|AF071172 Homo sapiens HERC2 (HERC2) mRNA, complete cds Length = 15304 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 ggtacagctccagcctcttg 327 |||||||||||||||||||| Sbjct: 3537 ggtacagctccagcctcttg 3518
>gb|AC005661.1|AC005661 citb_54_o_2, complete sequence Length = 84633 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 ggaaagttgcctaatctctc 397 |||||||||||||||||||| Sbjct: 1989 ggaaagttgcctaatctctc 1970
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 ccgcggggtcctcgtcgaggagct 376 ||||| |||||||||||||||||| Sbjct: 143203 ccgcgtggtcctcgtcgaggagct 143226
>emb|AL844883.15| Zebrafish DNA sequence from clone DKEY-3J22 in linkage group 18, complete sequence Length = 189984 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 55399 aacatatgccagaacagttg 55380
>emb|BX571970.20| Zebrafish DNA sequence from clone DKEY-276G11 in linkage group 7, complete sequence Length = 170614 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 76700 aacatatgccagaacagttg 76681
>gb|AF133124.1|AF133124 Homo sapiens transcription factor IIIC63 mRNA, complete cds Length = 2385 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gtacagctccagcctcttgg 328 |||||||||||||||||||| Sbjct: 481 gtacagctccagcctcttgg 462
>emb|AL133249.1|CNS01DUF BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 358K12 of library RPCI-11 from chromosome 2 of Homo sapiens (Human) Length = 168571 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctaatctctcttgctcc 404 |||||||||||||||||||| Sbjct: 34862 tgcctaatctctcttgctcc 34881
>emb|AL954770.9| Zebrafish DNA sequence from clone CH211-193A15, complete sequence Length = 151426 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 6939 aacatatgccagaacagttg 6958
>gb|AC004583.1|AC004583 Human Chromosome 15q11-q13 PAC clone pDJ778a2, complete sequence Length = 132493 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 ggtacagctccagcctcttg 327 |||||||||||||||||||| Sbjct: 80825 ggtacagctccagcctcttg 80806
>emb|AL929038.13| Zebrafish DNA sequence from clone DKEY-34D20 in linkage group 20, complete sequence Length = 213980 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 113223 aacatatgccagaacagttg 113204
>emb|BX005467.6| Mouse DNA sequence from clone RP23-74L11 on chromosome X, complete sequence Length = 233590 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 tgtcatctaataagaatatatgac 149 ||||||||||||| |||||||||| Sbjct: 132167 tgtcatctaataaaaatatatgac 132144
>emb|AL929514.7| Zebrafish DNA sequence from clone CH211-187D9, complete sequence Length = 174473 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 103205 aacatatgccagaacagttg 103224
>gb|BC006409.1| Homo sapiens cDNA clone IMAGE:3534349, containing frame-shift errors Length = 2136 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gtacagctccagcctcttgg 328 |||||||||||||||||||| Sbjct: 192 gtacagctccagcctcttgg 173
>gb|AC000394.1|AC000394 Genomic sequence from Human 9q34, complete sequence Length = 44294 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gtacagctccagcctcttgg 328 |||||||||||||||||||| Sbjct: 24242 gtacagctccagcctcttgg 24223
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 tcgaggagcttggaaagttg 386 |||||||||||||||||||| Sbjct: 3359423 tcgaggagcttggaaagttg 3359442
>emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, complete sequence Length = 154450 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 aacatatgccagaacagttg 529 |||||||||||||||||||| Sbjct: 12827 aacatatgccagaacagttg 12846
>emb|AJ420443.1|HSA420443 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1607066 Length = 2136 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gtacagctccagcctcttgg 328 |||||||||||||||||||| Sbjct: 194 gtacagctccagcctcttgg 175 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,552,810 Number of Sequences: 3902068 Number of extensions: 11552810 Number of successful extensions: 165240 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 164852 Number of HSP's gapped (non-prelim): 380 length of query: 705 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 682 effective length of database: 17,143,297,704 effective search space: 11691729034128 effective search space used: 11691729034128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)