>emb|AJ234417.1|HVU234417 Hordeum vulgare partial mRNA; clone cMWG0679.rev
          Length = 137

 Score =  264 bits (133), Expect = 1e-67
 Identities = 135/136 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gggnaaacatataaatgcataattgataaaaaatctcttgcttgatactatatatactca 64
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   ggggaaacatataaatgcataattgataaaaaatctcttgcttgatactatatatactca 61

                                                                       
Query: 65  tttcattcattactactaccccatgaagatgagtgcattcatacatatatactggcaagg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  tttcattcattactactaccccatgaagatgagtgcattcatacatatatactggcaagg 121

                           
Query: 125 agctatatacgcatag 140
           ||||||||||||||||
Sbjct: 122 agctatatacgcatag 137

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 51       actatatatactcatttcattc 72
                ||||||||||||||||||||||
Sbjct: 22552971 actatatatactcatttcattc 22552950

>dbj|AP005800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0016D04
          Length = 147313

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 51     actatatatactcatttcattc 72
              ||||||||||||||||||||||
Sbjct: 123327 actatatatactcatttcattc 123306

>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OSJNBb0056I22
          Length = 147728

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 51  actatatatactcatttcattc 72
           ||||||||||||||||||||||
Sbjct: 782 actatatatactcatttcattc 761

>ref|XM_483673.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 426

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 192 ccttcatctccgcctccgcctccg 215
           |||||| |||||||||||||||||
Sbjct: 203 ccttcacctccgcctccgcctccg 226

>ref|XM_463512.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1803

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 199 ctccgcctccgcctccgtag 218
           ||||||||||||||||||||
Sbjct: 274 ctccgcctccgcctccgtag 255

>ref|NM_190740.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2940

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 192 ccttcatctccgcctccgcctccg 215
           ||||| ||||||||||||||||||
Sbjct: 290 ccttcgtctccgcctccgcctccg 267

>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence
          Length = 168746

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     tgcattcatacatatatact 117
              ||||||||||||||||||||
Sbjct: 139770 tgcattcatacatatatact 139789

>gb|AC185988.2| Pan troglodytes BAC clone CH251-398L15 from chromosome 6, complete
              sequence
          Length = 148530

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     aacatataaatgcataattg 29
              ||||||||||||||||||||
Sbjct: 122195 aacatataaatgcataattg 122214

>ref|XM_385185.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05009.1)
           partial mRNA
          Length = 1284

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 78  tactaccccatgaagatgag 97
           ||||||||||||||||||||
Sbjct: 653 tactaccccatgaagatgag 672

>ref|XM_949453.1| Theileria annulata strain Ankara translation initiation factor
           eIF-2b epsilon subunit (TA19225) partial mRNA
          Length = 1974

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 65  tttcattcattactactaccccat 88
           ||||||||||||||||||| ||||
Sbjct: 496 tttcattcattactactactccat 473

>gb|AC092899.6| Homo sapiens 3 BAC RP11-329N5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 42216

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 62    tcatttcattcattactactaccc 85
             ||||||||||||||||||| ||||
Sbjct: 37915 tcatttcattcattactaccaccc 37892

>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence
          Length = 103866

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    tgcattcatacatatatact 117
             ||||||||||||||||||||
Sbjct: 11070 tgcattcatacatatatact 11089

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 17       aaatgcataattgataaaaa 36
                ||||||||||||||||||||
Sbjct: 17578697 aaatgcataattgataaaaa 17578678

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 196      catctccgcctccgcctccg 215
                ||||||||||||||||||||
Sbjct: 21366036 catctccgcctccgcctccg 21366055

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 192      ccttcatctccgcctccgcctccg 215
                |||||| |||||||||||||||||
Sbjct: 27579059 ccttcacctccgcctccgcctccg 27579082

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 199      ctccgcctccgcctccgtag 218
                ||||||||||||||||||||
Sbjct: 37956404 ctccgcctccgcctccgtag 37956385



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 192      ccttcatctccgcctccgcctccg 215
                ||||| ||||||||||||||||||
Sbjct: 37448923 ccttcgtctccgcctccgcctccg 37448900



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 196     catctccgcctccgcctccg 215
               ||||||||||||||||||||
Sbjct: 4890566 catctccgcctccgcctccg 4890585

>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0505D12
          Length = 146951

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 192   ccttcatctccgcctccgcctccg 215
             ||||| ||||||||||||||||||
Sbjct: 43460 ccttcgtctccgcctccgcctccg 43437

>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0698A10
          Length = 137348

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   ctccgcctccgcctccgtag 218
             ||||||||||||||||||||
Sbjct: 37348 ctccgcctccgcctccgtag 37329

>gb|AC069326.1|AC069326 Genomic Sequence For Arabidopsis thaliana Clone T24G5 From Chromosome
             V, complete sequence
          Length = 86358

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    gcttgatactatatatactc 63
             ||||||||||||||||||||
Sbjct: 30311 gcttgatactatatatactc 30292



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    gcttgatactatatatactc 63
             ||||||||||||||||||||
Sbjct: 25293 gcttgatactatatatactc 25274

>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0710E05
          Length = 179714

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    catctccgcctccgcctccg 215
              ||||||||||||||||||||
Sbjct: 135215 catctccgcctccgcctccg 135234

>emb|AL805898.11| Mouse DNA sequence from clone RP23-432F24 on chromosome 4, complete
              sequence
          Length = 215828

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    catctccgcctccgcctccg 215
              ||||||||||||||||||||
Sbjct: 123198 catctccgcctccgcctccg 123179

>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1479_B11
          Length = 105702

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 192   ccttcatctccgcctccgcctccg 215
             |||||| |||||||||||||||||
Sbjct: 61349 ccttcacctccgcctccgcctccg 61372

>dbj|AK103554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132G05, full
           insert sequence
          Length = 2348

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 199 ctccgcctccgcctccgtag 218
           ||||||||||||||||||||
Sbjct: 583 ctccgcctccgcctccgtag 564

>dbj|AK101856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069O10, full
           insert sequence
          Length = 2012

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 catctccgcctccgcctccg 215
           ||||||||||||||||||||
Sbjct: 51  catctccgcctccgcctccg 70

>dbj|AK071930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073N24, full
           insert sequence
          Length = 1991

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 catctccgcctccgcctccg 215
           ||||||||||||||||||||
Sbjct: 45  catctccgcctccgcctccg 64

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 196      catctccgcctccgcctccg 215
                ||||||||||||||||||||
Sbjct: 21292255 catctccgcctccgcctccg 21292274

>emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081G05,
             complete sequence
          Length = 173950

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    aaatgcataattgataaaaa 36
             ||||||||||||||||||||
Sbjct: 59437 aaatgcataattgataaaaa 59418

>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0648C09
          Length = 107522

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   ctccgcctccgcctccgtag 218
             ||||||||||||||||||||
Sbjct: 52680 ctccgcctccgcctccgtag 52661


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,800,668
Number of Sequences: 3902068
Number of extensions: 2800668
Number of successful extensions: 81238
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80761
Number of HSP's gapped (non-prelim): 477
length of query: 231
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 209
effective length of database: 17,147,199,772
effective search space: 3583764752348
effective search space used: 3583764752348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)