ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal39h22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATP4_PEA (Q41000) ATP synthase delta' chain, mitochondrial precu... 30 5.7

>ATP4_PEA (Q41000) ATP synthase delta' chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 197

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 6   ELLAVQVPVEITVPTKINCNFLSDSTQQTEQKRIASPVFSVHSG 137
           E L  + PV  T+PTK+  NF+   + Q   K + S +    +G
Sbjct: 51  EFLKTRPPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTG 94


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,021,906
Number of Sequences: 219361
Number of extensions: 1238938
Number of successful extensions: 2815
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2808
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7366267610
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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