ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal39h22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36
2dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36
3dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36
4dbj|AB117987.1| Oryza sativa (japonica cultivar-group) bip103 mR... 161 4e-36
5dbj|AK100527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 4e-36
6dbj|AK059253.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 4e-36
7gb|AY105847.1| Zea mays PCO081230 mRNA sequence 117 5e-23
8ref|XM_507220.1| PREDICTED Oryza sativa (japonica cultivar-group... 88 5e-14
9ref|XM_482186.1| Oryza sativa (japonica cultivar-group), mRNA 88 5e-14
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 88 5e-14
11dbj|AB117988.1| Oryza sativa (japonica cultivar-group) bip131 mR... 88 5e-14
12dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic D... 88 5e-14
13dbj|AK099893.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 5e-14
14dbj|AK067513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 5e-14
15gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 46 0.16
16gb|AC108404.8| Mus musculus chromosome 18, clone RP24-491I16, co... 46 0.16
17gb|AC101682.8| Mus musculus chromosome 18, clone RP23-183C23, co... 46 0.16
18ref|XM_464548.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.63
19dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 44 0.63
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.63
21dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.63
22gb|BC108597.1| Xenopus laevis cDNA clone MGC:131108 IMAGE:798285... 42 2.5
23emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081 42 2.5
24emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 42 2.5
25emb|AL022243.3|SPCC364 S.pombe chromosome III cosmid c364 42 2.5
26gb|AF064862.2| Homo sapiens chromosome 21 clone PAC 31P10 map 21... 42 2.5
27ref|NM_001022836.1| Schizosaccharomyces pombe 972h- hypothetical... 42 2.5
28ref|NM_118885.2| Arabidopsis thaliana PPI1 (PROTON PUMP INTERACT... 40 9.8
29gb|AY756174.4| Oryza rufipogon putative leucine-rich repeat rece... 40 9.8
30gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.8
31gb|AC117224.3| Mus musculus BAC clone RP23-356N8 from chromosome... 40 9.8
32gb|AC099668.2| Homo sapiens chromosome 3 clone RP11-901L6, compl... 40 9.8
33gb|AC157596.5| Mus musculus BAC clone RP23-240B9 from chromosome... 40 9.8
34emb|Z85996.1|HS431A14 Human DNA sequence from clone RP3-431A14 o... 40 9.8
35gb|AY143914.1| Arabidopsis thaliana At4g27500/F27G19_100 mRNA, c... 40 9.8
36gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 9.8
37emb|AL122034.29|HSDJ90K10 Human DNA sequence from clone RP1-90K1... 40 9.8
38emb|AL080312.14|HSJ1025A1 Human DNA sequence from clone RP5-1025... 40 9.8
39emb|AL035667.12|HS805C22 Human DNA sequence from clone RP4-805C2... 40 9.8
40ref|XM_781294.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.8
41gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 9.8
42emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, ... 40 9.8
43emb|AL078467.1|ATF27G19 Arabidopsis thaliana DNA chromosome 4, B... 40 9.8
44emb|AL596324.7| Mouse DNA sequence from clone RP23-324M14 on chr... 40 9.8
45emb|CR391977.5| Zebrafish DNA sequence from clone DKEYP-73B11 in... 40 9.8
46gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.8
47gb|AC104452.2| Homo sapiens chromosome 3 clone RP11-949J7, compl... 40 9.8
48dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 9.8
49gb|CP000249.1| Frankia sp. CcI3, complete genome 40 9.8
50dbj|AK220843.1| Arabidopsis thaliana mRNA for hypothetical prote... 40 9.8
51gb|AC093414.3| Homo sapiens chromosome 3 clone RP11-193I22, comp... 40 9.8
52gb|AY050365.1| Arabidopsis thaliana AT4g27500/F27G19_100 mRNA, c... 40 9.8
53gb|AC018616.5|AC018616 Homo sapiens chromosome 8, clone RP11-157... 40 9.8
54emb|BX323880.7| Zebrafish DNA sequence from clone CH211-139K8 in... 40 9.8
55dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
56dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
57emb|BX829254.1|CNS0A4EF Arabidopsis thaliana Full-length cDNA Co... 40 9.8
58gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complet... 40 9.8
59gb|AC137935.2| Homo sapiens chromosome 3 clone RP11-626A1, compl... 40 9.8
60dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 9.8
61gb|AC063945.16| Homo sapiens 12 BAC RP11-417A9 (Roswell Park Can... 40 9.8
62gb|AC068642.25| Homo sapiens 12 BAC RP11-328J6 (Roswell Park Can... 40 9.8
63dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
64dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
65dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
66dbj|AK111680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.8
67emb|AJ002020.2|ATAJ2020 Arabidopsis thaliana mRNA for proton pum... 40 9.8
68emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 9.8
69gb|AF031882.1|AF031882 Euprymna morsei internal transcribed spac... 40 9.8
70gb|AF031881.1|AF031881 Euprymna scolopes internal transcribed sp... 40 9.8
71emb|AL671975.12| Mouse DNA sequence from clone RP23-25O15 on chr... 40 9.8 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  161 bits (81), Expect = 4e-36
 Identities = 111/121 (91%)
 Strand = Plus / Minus

                                                                            
Query: 599      gtgctcgggctgcagccttcgctgcttgcttctcagcctgcttcttcttcctttccaaag 658
                |||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||  |
Sbjct: 10790302 gtgcacgggctgctgccttcgctgcttgcttctcggccagcttcttcttcctttccaggg 10790243

                                                                            
Query: 659      caagtttattcttctcgatttcctcctgtctcttgatctctttcaactttgctacatcaa 718
                ||||| |||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 10790242 caagtctattcttctccatctcctcctgtctcttgatctctttcaacttagctacatcaa 10790183

                 
Query: 719      c 719
                |
Sbjct: 10790182 c 10790182



 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                            
Query: 334      gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 393
                ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 10790685 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 10790626

                           
Query: 394      ttggtcttggt 404
                ||| |||||||
Sbjct: 10790625 ttgctcttggt 10790615



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                            
Query: 224      tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 283
                ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 10790789 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 10790730

                                      
Query: 284      cgagcagggcgacgagcacggc 305
                | ||||||||||||||| ||||
Sbjct: 10790729 caagcagggcgacgagcgcggc 10790708



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                                
Query: 143      gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 190
                |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 10790860 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 10790815
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>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score =  161 bits (81), Expect = 4e-36
 Identities = 111/121 (91%)
 Strand = Plus / Minus

                                                                         
Query: 599   gtgctcgggctgcagccttcgctgcttgcttctcagcctgcttcttcttcctttccaaag 658
             |||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||  |
Sbjct: 14025 gtgcacgggctgctgccttcgctgcttgcttctcggccagcttcttcttcctttccaggg 13966

                                                                         
Query: 659   caagtttattcttctcgatttcctcctgtctcttgatctctttcaactttgctacatcaa 718
             ||||| |||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 13965 caagtctattcttctccatctcctcctgtctcttgatctctttcaacttagctacatcaa 13906

              
Query: 719   c 719
             |
Sbjct: 13905 c 13905



 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                         
Query: 334   gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 393
             ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 14408 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 14349

                        
Query: 394   ttggtcttggt 404
             ||| |||||||
Sbjct: 14348 ttgctcttggt 14338



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                         
Query: 224   tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 283
             ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 14512 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 14453

                                   
Query: 284   cgagcagggcgacgagcacggc 305
             | ||||||||||||||| ||||
Sbjct: 14452 caagcagggcgacgagcgcggc 14431



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                             
Query: 143   gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 190
             |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 14583 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 14538
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>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0085I16
          Length = 141701

 Score =  161 bits (81), Expect = 4e-36
 Identities = 111/121 (91%)
 Strand = Plus / Minus

                                                                          
Query: 599    gtgctcgggctgcagccttcgctgcttgcttctcagcctgcttcttcttcctttccaaag 658
              |||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||  |
Sbjct: 126920 gtgcacgggctgctgccttcgctgcttgcttctcggccagcttcttcttcctttccaggg 126861

                                                                          
Query: 659    caagtttattcttctcgatttcctcctgtctcttgatctctttcaactttgctacatcaa 718
              ||||| |||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 126860 caagtctattcttctccatctcctcctgtctcttgatctctttcaacttagctacatcaa 126801

               
Query: 719    c 719
              |
Sbjct: 126800 c 126800



 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                          
Query: 334    gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 393
              ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 127303 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 127244

                         
Query: 394    ttggtcttggt 404
              ||| |||||||
Sbjct: 127243 ttgctcttggt 127233



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                          
Query: 224    tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 283
              ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 127407 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 127348

                                    
Query: 284    cgagcagggcgacgagcacggc 305
              | ||||||||||||||| ||||
Sbjct: 127347 caagcagggcgacgagcgcggc 127326



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                              
Query: 143    gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 190
              |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 127478 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 127433
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>dbj|AB117987.1| Oryza sativa (japonica cultivar-group) bip103 mRNA for BRI1-KD
            interacting protein 103, complete cds
          Length = 2366

 Score =  161 bits (81), Expect = 4e-36
 Identities = 111/121 (91%)
 Strand = Plus / Minus

                                                                        
Query: 599  gtgctcgggctgcagccttcgctgcttgcttctcagcctgcttcttcttcctttccaaag 658
            |||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||  |
Sbjct: 1611 gtgcacgggctgctgccttcgctgcttgcttctcggccagcttcttcttcctttccaggg 1552

                                                                        
Query: 659  caagtttattcttctcgatttcctcctgtctcttgatctctttcaactttgctacatcaa 718
            ||||| |||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1551 caagtctattcttctccatctcctcctgtctcttgatctctttcaacttagctacatcaa 1492

             
Query: 719  c 719
            |
Sbjct: 1491 c 1491



 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                        
Query: 334  gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 393
            ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 1885 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 1826

                       
Query: 394  ttggtcttggt 404
            ||| |||||||
Sbjct: 1825 ttgctcttggt 1815



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 224  tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 283
            ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 1989 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 1930

                                  
Query: 284  cgagcagggcgacgagcacggc 305
            | ||||||||||||||| ||||
Sbjct: 1929 caagcagggcgacgagcgcggc 1908



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                            
Query: 143  gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 190
            |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 2060 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 2015
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>dbj|AK100527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101D09, full
            insert sequence
          Length = 2295

 Score =  161 bits (81), Expect = 4e-36
 Identities = 111/121 (91%)
 Strand = Plus / Minus

                                                                        
Query: 599  gtgctcgggctgcagccttcgctgcttgcttctcagcctgcttcttcttcctttccaaag 658
            |||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||  |
Sbjct: 1613 gtgcacgggctgctgccttcgctgcttgcttctcggccagcttcttcttcctttccaggg 1554

                                                                        
Query: 659  caagtttattcttctcgatttcctcctgtctcttgatctctttcaactttgctacatcaa 718
            ||||| |||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1553 caagtctattcttctccatctcctcctgtctcttgatctctttcaacttagctacatcaa 1494

             
Query: 719  c 719
            |
Sbjct: 1493 c 1493



 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                        
Query: 334  gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 393
            ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 1887 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 1828

                       
Query: 394  ttggtcttggt 404
            ||| |||||||
Sbjct: 1827 ttgctcttggt 1817



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 224  tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 283
            ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 1991 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 1932

                                  
Query: 284  cgagcagggcgacgagcacggc 305
            | ||||||||||||||| ||||
Sbjct: 1931 caagcagggcgacgagcgcggc 1910



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                            
Query: 143  gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 190
            |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 2062 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 2017
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>dbj|AK059253.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-H05, full
           insert sequence
          Length = 1352

 Score =  161 bits (81), Expect = 4e-36
 Identities = 111/121 (91%)
 Strand = Plus / Minus

                                                                       
Query: 599 gtgctcgggctgcagccttcgctgcttgcttctcagcctgcttcttcttcctttccaaag 658
           |||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||  |
Sbjct: 689 gtgcacgggctgctgccttcgctgcttgcttctcggccagcttcttcttcctttccaggg 630

                                                                       
Query: 659 caagtttattcttctcgatttcctcctgtctcttgatctctttcaactttgctacatcaa 718
           ||||| |||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 629 caagtctattcttctccatctcctcctgtctcttgatctctttcaacttagctacatcaa 570

            
Query: 719 c 719
           |
Sbjct: 569 c 569



 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                       
Query: 334 gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 393
           ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 963 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 904

                      
Query: 394 ttggtcttggt 404
           ||| |||||||
Sbjct: 903 ttgctcttggt 893



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 224  tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 283
            ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 1067 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 1008

                                  
Query: 284  cgagcagggcgacgagcacggc 305
            | ||||||||||||||| ||||
Sbjct: 1007 caagcagggcgacgagcgcggc 986



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                            
Query: 143  gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 190
            |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 1138 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 1093
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>gb|AY105847.1| Zea mays PCO081230 mRNA sequence
          Length = 1699

 Score =  117 bits (59), Expect = 5e-23
 Identities = 89/99 (89%)
 Strand = Plus / Minus

                                                                       
Query: 619 gctgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatt 678
           |||||||||||||||||||||||||||||||| ||||| ||||| || |||||||| || 
Sbjct: 990 gctgcttgcttctcagcctgcttcttcttcctctccaatgcaagcttgttcttctcaatc 931

                                                  
Query: 679 tcctcctgtctcttgatctctttcaactttgctacatca 717
           |||||||| ||||| |||||||||||||| || ||||||
Sbjct: 930 tcctcctgcctcttcatctctttcaacttagccacatca 892



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                        
Query: 234  tcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccgcgagcagggc 293
            |||||||||||   |||| ||| |||||||||||||||| |||||| ||||||| |||||
Sbjct: 1370 tcagttgctggcattcgctgggaggtagtactggtagtatcccagcaccgcgaggagggc 1311

                        
Query: 294  gacgagcacggc 305
             || ||||||||
Sbjct: 1310 aaccagcacggc 1299



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 334  gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctt 380
            |||||||||| ||| ||||| || |||||||||||||||||||||||
Sbjct: 1276 gcccatgaccagtaggactgcgccttcttcctcttcaggatcgcctt 1230



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 164  tctcacctgcaaaattggtct 184
            |||||||||||||||||||||
Sbjct: 1440 tctcacctgcaaaattggtct 1420
to top
>ref|XM_507220.1| PREDICTED Oryza sativa (japonica cultivar-group), P0671F11.9 mRNA
          Length = 2293

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                        
Query: 621  tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 680
            |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 1600 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 1541

                                                
Query: 681  ctcctgtctcttgatctctttcaactttgctacatc 716
             ||||||||||| ||||||||||| |||||| ||||
Sbjct: 1540 ttcctgtctcttcatctctttcaattttgcttcatc 1505



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 357  tttcttcctcttcaggatcgcctt 380
            ||||||||||||||||| ||||||
Sbjct: 1858 tttcttcctcttcaggaccgcctt 1835
to top
>ref|XM_482186.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2281

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                        
Query: 621  tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 680
            |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 1635 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 1576

                                                
Query: 681  ctcctgtctcttgatctctttcaactttgctacatc 716
             ||||||||||| ||||||||||| |||||| ||||
Sbjct: 1575 ttcctgtctcttcatctctttcaattttgcttcatc 1540



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 357  tttcttcctcttcaggatcgcctt 380
            ||||||||||||||||| ||||||
Sbjct: 1893 tttcttcctcttcaggaccgcctt 1870
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                            
Query: 621      tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 680
                |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 18472732 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 18472673

                                                    
Query: 681      ctcctgtctcttgatctctttcaactttgctacatc 716
                 ||||||||||| ||||||||||| |||||| ||||
Sbjct: 18472672 ttcctgtctcttcatctctttcaattttgcttcatc 18472637



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 357      tttcttcctcttcaggatcgcctt 380
                ||||||||||||||||| ||||||
Sbjct: 18473105 tttcttcctcttcaggaccgcctt 18473082
to top
>dbj|AB117988.1| Oryza sativa (japonica cultivar-group) bip131 mRNA for BRI1-KD
            interacting protein 131, complete cds
          Length = 2275

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                        
Query: 621  tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 680
            |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 1606 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 1547

                                                
Query: 681  ctcctgtctcttgatctctttcaactttgctacatc 716
             ||||||||||| ||||||||||| |||||| ||||
Sbjct: 1546 ttcctgtctcttcatctctttcaattttgcttcatc 1511



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 357  tttcttcctcttcaggatcgcctt 380
            ||||||||||||||||| ||||||
Sbjct: 1864 tttcttcctcttcaggaccgcctt 1841
to top
>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0671F11
          Length = 159409

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                         
Query: 621   tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 680
             |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 54755 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 54696

                                                 
Query: 681   ctcctgtctcttgatctctttcaactttgctacatc 716
              ||||||||||| ||||||||||| |||||| ||||
Sbjct: 54695 ttcctgtctcttcatctctttcaattttgcttcatc 54660



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 357   tttcttcctcttcaggatcgcctt 380
             ||||||||||||||||| ||||||
Sbjct: 55128 tttcttcctcttcaggaccgcctt 55105
to top
>dbj|AK099893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113F23, full
            insert sequence
          Length = 2281

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                        
Query: 621  tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 680
            |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 1635 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 1576

                                                
Query: 681  ctcctgtctcttgatctctttcaactttgctacatc 716
             ||||||||||| ||||||||||| |||||| ||||
Sbjct: 1575 ttcctgtctcttcatctctttcaattttgcttcatc 1540



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 357  tttcttcctcttcaggatcgcctt 380
            ||||||||||||||||| ||||||
Sbjct: 1893 tttcttcctcttcaggaccgcctt 1870
to top
>dbj|AK067513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110G07, full
            insert sequence
          Length = 2293

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                        
Query: 621  tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 680
            |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 1600 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 1541

                                                
Query: 681  ctcctgtctcttgatctctttcaactttgctacatc 716
             ||||||||||| ||||||||||| |||||| ||||
Sbjct: 1540 ttcctgtctcttcatctctttcaattttgcttcatc 1505



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 357  tttcttcctcttcaggatcgcctt 380
            ||||||||||||||||| ||||||
Sbjct: 1858 tttcttcctcttcaggaccgcctt 1835
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 384     cagcggggccttggtcttggtga 406
               |||||||||||||||||||||||
Sbjct: 2663170 cagcggggccttggtcttggtga 2663148
to top
>gb|AC108404.8| Mus musculus chromosome 18, clone RP24-491I16, complete sequence
          Length = 196638

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 641    tcttcttcctttccaaagcaagt 663
              |||||||||||||||||||||||
Sbjct: 112386 tcttcttcctttccaaagcaagt 112408
to top
>gb|AC101682.8| Mus musculus chromosome 18, clone RP23-183C23, complete sequence
          Length = 227840

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 641   tcttcttcctttccaaagcaagt 663
             |||||||||||||||||||||||
Sbjct: 33865 tcttcttcctttccaaagcaagt 33843
to top
>ref|XM_464548.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 846

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 291 ggcgacgagcacggccacggcg 312
           ||||||||||||||||||||||
Sbjct: 339 ggcgacgagcacggccacggcg 318
to top
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 627     cttctcagcctgcttcttcttc 648
               ||||||||||||||||||||||
Sbjct: 1306517 cttctcagcctgcttcttcttc 1306538
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 291     ggcgacgagcacggccacggcg 312
               ||||||||||||||||||||||
Sbjct: 5819104 ggcgacgagcacggccacggcg 5819125



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 107     agcttctccagtcttttcag 126
               ||||||||||||||||||||
Sbjct: 2940472 agcttctccagtcttttcag 2940491
to top
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0544H11
          Length = 178376

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 291   ggcgacgagcacggccacggcg 312
             ||||||||||||||||||||||
Sbjct: 48906 ggcgacgagcacggccacggcg 48927
to top
>gb|BC108597.1| Xenopus laevis cDNA clone MGC:131108 IMAGE:7982859, complete cds
          Length = 1735

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 680 cctcctgtctcttgatctctt 700
           |||||||||||||||||||||
Sbjct: 535 cctcctgtctcttgatctctt 515
to top
>emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 678    ttcctcctgtctcttgatctctttc 702
              ||||||||||||||| |||||||||
Sbjct: 184189 ttcctcctgtctctttatctctttc 184213
to top
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 277   agcgccgcgagcagggcgacg 297
             |||||||||||||||||||||
Sbjct: 14231 agcgccgcgagcagggcgacg 14211
to top
>emb|AL022243.3|SPCC364 S.pombe chromosome III cosmid c364
          Length = 14999

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 355   gctttcttcctcttcaggatc 375
             |||||||||||||||||||||
Sbjct: 13769 gctttcttcctcttcaggatc 13749
to top
>gb|AF064862.2| Homo sapiens chromosome 21 clone PAC 31P10 map 21q22.3, complete
             sequence
          Length = 145861

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 678   ttcctcctgtctcttgatctctttc 702
             ||||||||||||||| |||||||||
Sbjct: 30027 ttcctcctgtctctttatctctttc 30051
to top
>ref|NM_001022836.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC364.01),
           partial mRNA
          Length = 963

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 355 gctttcttcctcttcaggatc 375
           |||||||||||||||||||||
Sbjct: 336 gctttcttcctcttcaggatc 356
to top
>ref|NM_118885.2| Arabidopsis thaliana PPI1 (PROTON PUMP INTERACTOR 1) AT4G27500 (PPI1)
            mRNA, complete cds
          Length = 1964

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 628  ttctcagcctgcttcttcttcctttcca 655
            ||||| ||| ||||||||||||||||||
Sbjct: 1612 ttctctgccagcttcttcttcctttcca 1585
to top
>gb|AY756174.4| Oryza rufipogon putative leucine-rich repeat receptor-like kinases and
             ternary complex factor MIP1-like genes, complete cds;
             retrotransposon putative membrane-associated protein and
             gag-pol precursor, pseudogenes, complete sequence; and
             unknown genes
          Length = 102522

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   agcttctccagtcttttcag 126
             ||||||||||||||||||||
Sbjct: 44105 agcttctccagtcttttcag 44086
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 173      caaaattggtctagtaagattcat 196
                |||||||| |||||||||||||||
Sbjct: 12464532 caaaattgctctagtaagattcat 12464555
to top
>gb|AC117224.3| Mus musculus BAC clone RP23-356N8 from chromosome 16, complete sequence
          Length = 197831

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 677   tttcctcctgtctcttgatc 696
             ||||||||||||||||||||
Sbjct: 15368 tttcctcctgtctcttgatc 15349
to top
>gb|AC099668.2| Homo sapiens chromosome 3 clone RP11-901L6, complete sequence
          Length = 242222

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 677    tttcctcctgtctcttgatctctt 700
              ||||||||||||||||| ||||||
Sbjct: 188725 tttcctcctgtctcttgctctctt 188702
to top
>gb|AC157596.5| Mus musculus BAC clone RP23-240B9 from chromosome 16, complete sequence
          Length = 204275

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 677    tttcctcctgtctcttgatc 696
              ||||||||||||||||||||
Sbjct: 103267 tttcctcctgtctcttgatc 103286
to top
>emb|Z85996.1|HS431A14 Human DNA sequence from clone RP3-431A14 on chromosome 6p21 Contains the
              CDKN1A gene for cyclin-dependent kinase inhibitor 1A, the
              gene for a novel protein similar to ras family protein, the
              gene for a novel copine-like protein (KIA1599), a galanin
              receptor pseudogene, the 3' end of the PPIL1 gene for
              peptidylprolyl isomerase protein and 2 CpG islands,
              complete sequence
          Length = 195364

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 623    cttgcttctcagcctgcttcttct 646
              |||||||||||| |||||||||||
Sbjct: 194774 cttgcttctcagtctgcttcttct 194751
to top
>gb|AY143914.1| Arabidopsis thaliana At4g27500/F27G19_100 mRNA, complete cds
          Length = 1839

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 628  ttctcagcctgcttcttcttcctttcca 655
            ||||| ||| ||||||||||||||||||
Sbjct: 1487 ttctctgccagcttcttcttcctttcca 1460
to top
>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03,
              from chromosome 3, complete sequence
          Length = 124550

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 173    caaaattggtctagtaagattcat 196
              |||||||| |||||||||||||||
Sbjct: 123409 caaaattgctctagtaagattcat 123386
to top
>emb|AL122034.29|HSDJ90K10 Human DNA sequence from clone RP1-90K10 on chromosome 6 Contains the
            PPIL1 gene for peptidylprolyl isomerase
            (cyclophilin)-like 1 (CYPL1, CGI-124), gene FLJ25357, a
            novel gene, a novel pseudogene, the gene for a novel
            SCP-like extracellular protein, the gene for
            mitochondrial carrier homolog 1 (MTCH1) (CGI-64) and two
            CpG islands, complete sequence
          Length = 133154

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 623  cttgcttctcagcctgcttcttct 646
            |||||||||||| |||||||||||
Sbjct: 1410 cttgcttctcagtctgcttcttct 1387
to top
>emb|AL080312.14|HSJ1025A1 Human DNA sequence from clone RP5-1025A1 on chromosome 20p11.21-11.23
             Contains the 5' part of the ACAS2L gene for
             acetyl-Coenzyme A synthetase (AMP forming)-like, the VSX1
             gene for visual system homeobox 1 (zebrafish) homolog
             (CHX10-like), variants L1 and S1 and four CpG islands,
             complete sequence
          Length = 94664

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   gttgctctcacctgcaaaat 178
             ||||||||||||||||||||
Sbjct: 56474 gttgctctcacctgcaaaat 56455
to top
>emb|AL035667.12|HS805C22 Human DNA sequence from clone RP4-805C22 on chromosome 20q13.2-13.32
             Contains the 3' end of the gene for downstream of tyrosine
             kinase 5 (DOK5) protein, complete sequence
          Length = 135391

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 427   ttctgcttctgttctttgttcaat 450
             ||||||||||||||||| ||||||
Sbjct: 13607 ttctgcttctgttcttttttcaat 13630
to top
>ref|XM_781294.1| PREDICTED: Strongylocentrotus purpuratus similar to echinoderm
            microtubule associated protein like 2 (LOC581284), mRNA
          Length = 2025

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 639  cttcttcttcctttccaaag 658
            ||||||||||||||||||||
Sbjct: 1777 cttcttcttcctttccaaag 1758
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 264     ctggtagtagcccagcgccg 283
               ||||||||||||||||||||
Sbjct: 2771610 ctggtagtagcccagcgccg 2771591
to top
>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67
          Length = 200001

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 628   ttctcagcctgcttcttcttcctttcca 655
             ||||| ||| ||||||||||||||||||
Sbjct: 55936 ttctctgccagcttcttcttcctttcca 55909
to top
>emb|AL078467.1|ATF27G19 Arabidopsis thaliana DNA chromosome 4, BAC clone F27G19 (ESSA project)
          Length = 82381

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 628   ttctcagcctgcttcttcttcctttcca 655
             ||||| ||| ||||||||||||||||||
Sbjct: 69042 ttctctgccagcttcttcttcctttcca 69015
to top
>emb|AL596324.7| Mouse DNA sequence from clone RP23-324M14 on chromosome 11, complete
              sequence
          Length = 204453

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 626    gcttctcagcctgcttcttcttcc 649
              ||||||| ||||||||||||||||
Sbjct: 145860 gcttctctgcctgcttcttcttcc 145837
to top
>emb|CR391977.5| Zebrafish DNA sequence from clone DKEYP-73B11 in linkage group 25,
              complete sequence
          Length = 189510

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 351    ctgggctttcttcctcttcaggat 374
              ||||||||||||||| ||||||||
Sbjct: 164613 ctgggctttcttccttttcaggat 164636
to top
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14,
              complete sequence
          Length = 132560

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 173    caaaattggtctagtaagattcat 196
              |||||||| |||||||||||||||
Sbjct: 122214 caaaattgctctagtaagattcat 122237
to top
>gb|AC104452.2| Homo sapiens chromosome 3 clone RP11-949J7, complete sequence
          Length = 186563

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 677   tttcctcctgtctcttgatctctt 700
             ||||||||||||||||| ||||||
Sbjct: 19909 tttcctcctgtctcttgctctctt 19886
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    gttgctggtgctcgccgggc 256
              ||||||||||||||||||||
Sbjct: 251688 gttgctggtgctcgccgggc 251669
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 280     gccgcgagcagggcgacgagcacg 303
               ||||||||||| ||||||||||||
Sbjct: 1908821 gccgcgagcagcgcgacgagcacg 1908844
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>dbj|AK220843.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL22-38-F07
          Length = 570

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 628 ttctcagcctgcttcttcttcctttcca 655
           ||||| ||| ||||||||||||||||||
Sbjct: 65  ttctctgccagcttcttcttcctttcca 38
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>gb|AC093414.3| Homo sapiens chromosome 3 clone RP11-193I22, complete sequence
          Length = 185511

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     gagttactggcagtacaagt 25
             ||||||||||||||||||||
Sbjct: 39719 gagttactggcagtacaagt 39700
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>gb|AY050365.1| Arabidopsis thaliana AT4g27500/F27G19_100 mRNA, complete cds
          Length = 2210

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 628  ttctcagcctgcttcttcttcctttcca 655
            ||||| ||| ||||||||||||||||||
Sbjct: 1612 ttctctgccagcttcttcttcctttcca 1585
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>gb|AC018616.5|AC018616 Homo sapiens chromosome 8, clone RP11-157I4, complete sequence
          Length = 165948

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    accaaaattaactgcaactt 67
             ||||||||||||||||||||
Sbjct: 30150 accaaaattaactgcaactt 30131
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>emb|BX323880.7| Zebrafish DNA sequence from clone CH211-139K8 in linkage group 2,
              complete sequence
          Length = 166870

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    tttccttacatcagttgctg 243
              ||||||||||||||||||||
Sbjct: 111530 tttccttacatcagttgctg 111511
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 173      caaaattggtctagtaagattcat 196
                |||||||| |||||||||||||||
Sbjct: 18561772 caaaattgctctagtaagattcat 18561795
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 173      caaaattggtctagtaagattcat 196
                |||||||| |||||||||||||||
Sbjct: 12461295 caaaattgctctagtaagattcat 12461318
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>emb|BX829254.1|CNS0A4EF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL84ZE04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 493

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 628 ttctcagcctgcttcttcttcctttcca 655
           ||||| ||| ||||||||||||||||||
Sbjct: 29  ttctctgccagcttcttcttcctttcca 2
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>gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complete sequence
          Length = 233117

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    ttttccttacatcagttgct 242
              ||||||||||||||||||||
Sbjct: 181477 ttttccttacatcagttgct 181458
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>gb|AC137935.2| Homo sapiens chromosome 3 clone RP11-626A1, complete sequence
          Length = 175912

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      gagttactggcagtacaagt 25
              ||||||||||||||||||||
Sbjct: 164212 gagttactggcagtacaagt 164193
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 286     agcagggcgacgagcacggc 305
               ||||||||||||||||||||
Sbjct: 3123448 agcagggcgacgagcacggc 3123467
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>gb|AC063945.16| Homo sapiens 12 BAC RP11-417A9 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 32993

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   actccacccaacaaacagaa 95
            ||||||||||||||||||||
Sbjct: 1150 actccacccaacaaacagaa 1169
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>gb|AC068642.25| Homo sapiens 12 BAC RP11-328J6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 59907

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    actccacccaacaaacagaa 95
             ||||||||||||||||||||
Sbjct: 59052 actccacccaacaaacagaa 59071
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>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0005E02
          Length = 89380

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 173   caaaattggtctagtaagattcat 196
             |||||||| |||||||||||||||
Sbjct: 14314 caaaattgctctagtaagattcat 14337
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>dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0463E12
          Length = 161081

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   agcttctccagtcttttcag 126
             ||||||||||||||||||||
Sbjct: 66111 agcttctccagtcttttcag 66130
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>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1457_D07
          Length = 103688

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 173   caaaattggtctagtaagattcat 196
             |||||||| |||||||||||||||
Sbjct: 90528 caaaattgctctagtaagattcat 90551
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>dbj|AK111680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168E03, full
           insert sequence
          Length = 3393

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 107 agcttctccagtcttttcag 126
           ||||||||||||||||||||
Sbjct: 965 agcttctccagtcttttcag 946
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>emb|AJ002020.2|ATAJ2020 Arabidopsis thaliana mRNA for proton pump interactor, partial
          Length = 2117

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 628  ttctcagcctgcttcttcttcctttcca 655
            ||||| ||| ||||||||||||||||||
Sbjct: 1592 ttctctgccagcttcttcttcctttcca 1565
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   gggcgacgagcacggccacg 309
             ||||||||||||||||||||
Sbjct: 10389 gggcgacgagcacggccacg 10370
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>gb|AF031882.1|AF031882 Euprymna morsei internal transcribed spacer region
          Length = 1285

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 279  cgccgcgagcagggcgacgagcacggcc 306
            |||| ||||||| |||||||||||||||
Sbjct: 991  cgcctcgagcagcgcgacgagcacggcc 1018
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>gb|AF031881.1|AF031881 Euprymna scolopes internal transcribed spacer region
          Length = 1359

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 279  cgccgcgagcagggcgacgagcacggcc 306
            |||| ||||||| |||||||||||||||
Sbjct: 1069 cgcctcgagcagcgcgacgagcacggcc 1096
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>emb|AL671975.12| Mouse DNA sequence from clone RP23-25O15 on chromosome X, complete
             sequence
          Length = 231530

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 622   gcttgcttctcagcctgctt 641
             ||||||||||||||||||||
Sbjct: 50864 gcttgcttctcagcctgctt 50845


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,663,886
Number of Sequences: 3902068
Number of extensions: 6663886
Number of successful extensions: 172031
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 171114
Number of HSP's gapped (non-prelim): 911
length of query: 719
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 696
effective length of database: 17,143,297,704
effective search space: 11931735201984
effective search space used: 11931735201984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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