ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal39h14 |
|---|---|
| Clone Library Name | barley_pub |
>MRS2_NEUCR (Q7SFQ9) Inner membrane magnesium transporter MRS2, mitochondrial| precursor (RNA-splicing protein MRS2) Length = 547 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/77 (27%), Positives = 35/77 (45%) Frame = -3 Query: 575 NYLQRCESCHGQAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAG 396 +Y + C+ +A L+ S R E+ I VGT +A+G +A Sbjct: 391 SYNKICDEVVEEASNLVSSIRNTEEIIRAILDANRNSLMLLDLKFSVGTLGLAMGTFLAS 450 Query: 395 IFGMNLKSYLENNTWAF 345 +GMNL++++E W F Sbjct: 451 WYGMNLENFIEETNWGF 467
>MRS2_YARLI (Q6C8H7) Inner membrane magnesium transporter MRS2, mitochondrial| precursor (RNA-splicing protein MRS2) Length = 455 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/76 (25%), Positives = 34/76 (44%) Frame = -3 Query: 572 YLQRCESCHGQAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAGI 393 Y + C+ L+ + R E+ + + Q+G +A G IA + Sbjct: 322 YYKHCDEIVQTVGNLVSNIRNTEEIVNIILDANRNALMHLDLKFQIGALGLAGGTFIASL 381 Query: 392 FGMNLKSYLENNTWAF 345 +GMNLK+++E + W F Sbjct: 382 YGMNLKNFIEESYWGF 397
>MRS2_GIBZE (Q4I298) Inner membrane magnesium transporter MRS2, mitochondrial| precursor (RNA-splicing protein MRS2) Length = 498 Score = 40.8 bits (94), Expect = 0.004 Identities = 18/66 (27%), Positives = 31/66 (46%) Frame = -3 Query: 542 QAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAGIFGMNLKSYLE 363 +A L+ R E+ + VGT +A+G +AG++GMNL++++E Sbjct: 353 EAGNLVSGIRNTEEIVRAILDANRNALMLLDLKFSVGTLGLAMGTFLAGLYGMNLENFIE 412 Query: 362 NNTWAF 345 W F Sbjct: 413 ETNWGF 418
>MRS2_KLULA (Q6CLJ5) Inner membrane magnesium transporter MRS2, mitochondrial| precursor (RNA-splicing protein MRS2) Length = 442 Score = 39.7 bits (91), Expect = 0.009 Identities = 18/76 (23%), Positives = 35/76 (46%) Frame = -3 Query: 572 YLQRCESCHGQAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAGI 393 Y ++C+ Q+E L+ + E+ + + + V T V L+ Sbjct: 272 YYKQCDEYVQQSESLIQDIKSTEEIVNIILDANRNSLLLFELKVTVYTLGFTVATLVPAF 331 Query: 392 FGMNLKSYLENNTWAF 345 +GMNLK+++E++ W F Sbjct: 332 YGMNLKNFIEDSNWGF 347
>MRS2_CANAL (Q5A970) Inner membrane magnesium transporter MRS2, mitochondrial| precursor (RNA-splicing protein MRS2) Length = 468 Score = 39.3 bits (90), Expect = 0.012 Identities = 20/77 (25%), Positives = 32/77 (41%) Frame = -3 Query: 575 NYLQRCESCHGQAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAG 396 +Y +C+ QA LL + E+ + + + V T V L+ Sbjct: 290 SYYNQCDEYVQQAGSLLSDIKATEEIVNIILDANRNSLMLFELKITVYTLGFTVATLVPA 349 Query: 395 IFGMNLKSYLENNTWAF 345 +GMNLK+Y+E W F Sbjct: 350 FYGMNLKNYIEETNWGF 366
>MRS2_DEBHA (Q6BX67) Inner membrane magnesium transporter MRS2, mitochondrial| precursor (RNA-splicing protein MRS2) Length = 476 Score = 37.4 bits (85), Expect = 0.044 Identities = 19/77 (24%), Positives = 36/77 (46%) Frame = -3 Query: 575 NYLQRCESCHGQAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAG 396 +Y ++C+ QA L++ + E+ + + + V T V L+ Sbjct: 312 SYYKQCDEFVQQAGSLINDIKATEEIVNIILDTNRNSLMLFELKITVYTLGFTVATLLPA 371 Query: 395 IFGMNLKSYLENNTWAF 345 +GMNLK+Y+E +T+ F Sbjct: 372 FYGMNLKNYIEESTFGF 388
>MRS2_ASHGO (Q759B8) Inner membrane magnesium transporter MRS2, mitochondrial| precursor (RNA-splicing protein MRS2) Length = 423 Score = 37.0 bits (84), Expect = 0.057 Identities = 20/100 (20%), Positives = 38/100 (38%) Frame = -3 Query: 572 YLQRCESCHGQAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAGI 393 Y ++C+ Q+ LL + + ED + + + + T V L+ Sbjct: 253 YYKQCDEYVQQSGSLLQNIKSTEDVVNIILDANRNSLMLFELKVTIYTLGFTVATLLPAF 312 Query: 392 FGMNLKSYLENNTWAFWXXXXXXXXXXXXXXXIMYKYLKD 273 GMNLK+++E + W F +K L++ Sbjct: 313 CGMNLKNFIEESVWGFGGVLAVSAVAGLAVTASNFKALRN 352
>MRS2_YEAST (Q01926) Magnesium transporter MRS2, mitochondrial precursor| (RNA-splicing protein MRS2) Length = 470 Score = 36.6 bits (83), Expect = 0.075 Identities = 16/76 (21%), Positives = 34/76 (44%) Frame = -3 Query: 572 YLQRCESCHGQAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAGI 393 Y +C+ Q+E L+ + E+ + + + + T V +++ Sbjct: 272 YYTQCDEYVQQSESLIQDIKSTEEIVNIILDANRNSLMLLELKVTIYTLGFTVASVLPAF 331 Query: 392 FGMNLKSYLENNTWAF 345 +GMNLK+++E + W F Sbjct: 332 YGMNLKNFIEESEWGF 347
>MRS2L_MOUSE (Q5NCE8) Magnesium transporter MRS2L, mitochondrial precursor| (MRS2-like protein) Length = 434 Score = 35.8 bits (81), Expect = 0.13 Identities = 22/78 (28%), Positives = 34/78 (43%) Frame = -3 Query: 575 NYLQRCESCHGQAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAG 396 NY + E +A L + + I +N L +GTF +++ L+ Sbjct: 289 NYYRLAEDLSNEARELRVLIDDSQSIIFINLDSHRNVMMRLNLQLTMGTFSLSLFGLMGV 348 Query: 395 IFGMNLKSYLENNTWAFW 342 FGMNL+S LE + FW Sbjct: 349 AFGMNLESSLEEDHRVFW 366
>MRS2_ASPFU (Q4WCV3) Inner membrane magnesium transporter mrs2, mitochondrial| precursor (RNA-splicing protein mrs2) Length = 597 Score = 35.8 bits (81), Expect = 0.13 Identities = 18/77 (23%), Positives = 34/77 (44%) Frame = -3 Query: 575 NYLQRCESCHGQAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAG 396 +Y + C+ + L+ S R E+ + +GT +A G L + Sbjct: 386 SYHKVCDEIVQASGNLVTSIRNTEEVVKAILDANRNSLMLLDLKFSIGTLGLATGTLFSA 445 Query: 395 IFGMNLKSYLENNTWAF 345 ++GMNLK+++E + F Sbjct: 446 LYGMNLKNFIEESDLGF 462
>MRS2_SCHPO (P87149) Inner membrane magnesium transporter mrs2, mitochondrial| precursor (RNA-splicing protein mrs2) Length = 422 Score = 35.0 bits (79), Expect = 0.22 Identities = 19/77 (24%), Positives = 37/77 (48%) Frame = -3 Query: 572 YLQRCESCHGQAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAGI 393 Y ++ + Q + L+ + R E+ + L T + GA++A + Sbjct: 295 YCKQVDEIVQQTDNLVGNIRSTEEICNIMLDANRNSLMLLGLKLSAMTLGLGFGAVVASL 354 Query: 392 FGMNLKSYLENNTWAFW 342 +GMNL++ LEN+ +AF+ Sbjct: 355 YGMNLQNGLENHPYAFY 371
>MRS2L_RAT (Q9ET09) Magnesium transporter MRS2L, mitochondrial precursor| (MRS2-like protein) Length = 434 Score = 34.7 bits (78), Expect = 0.28 Identities = 21/78 (26%), Positives = 34/78 (43%) Frame = -3 Query: 575 NYLQRCESCHGQAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAG 396 NY + + +A L + + I +N L +GTF +++ L+ Sbjct: 289 NYYRLADDLSNEARELRVLIDDSQSIIFINLDSHRNVMMRLNLQLTMGTFSLSLFGLMGV 348 Query: 395 IFGMNLKSYLENNTWAFW 342 FGMNL+S LE + FW Sbjct: 349 AFGMNLESSLEEDHRVFW 366
>MRS2_CANGA (Q6FV22) Inner membrane magnesium transporter MRS2, mitochondrial| precursor (RNA-splicing protein MRS2) Length = 456 Score = 33.9 bits (76), Expect = 0.48 Identities = 20/99 (20%), Positives = 36/99 (36%) Frame = -3 Query: 572 YLQRCESCHGQAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAGI 393 Y +C+ QAE L+ + E+ + + + + T V L+ Sbjct: 290 YYTQCDEYVQQAESLIQDIKSTEEIVNIILDANRNSLMLLELKITIYTLGFTVATLVPAF 349 Query: 392 FGMNLKSYLENNTWAFWXXXXXXXXXXXXXXXIMYKYLK 276 +GMNLK+++E + F +K LK Sbjct: 350 YGMNLKNFIEESYLGFGAVVVFSILSAYLVTRANFKALK 388
>MRS2L_PONPY (Q5R447) Magnesium transporter MRS2L, mitochondrial precursor| (MRS2-like protein) Length = 443 Score = 33.1 bits (74), Expect = 0.83 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%) Frame = -3 Query: 557 ESCHGQAERLLDSAREM----EDS---IAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIA 399 E+ + A+ L ++ARE+ +DS I +N L +GTF +++ L+ Sbjct: 297 ENYYRLADDLSNAARELRVLIDDSQSIIFINLGSHRNVMMRLNLQLTMGTFSLSLFGLMG 356 Query: 398 GIFGMNLKSYLENNTWAFW 342 FGMNL+S LE + FW Sbjct: 357 VAFGMNLESSLEEDHRIFW 375
>MRS2L_MACFA (Q4R4M1) Magnesium transporter MRS2L, mitochondrial precursor| (MRS2-like protein) Length = 408 Score = 33.1 bits (74), Expect = 0.83 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%) Frame = -3 Query: 557 ESCHGQAERLLDSAREM----EDS---IAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIA 399 E+ + A+ L ++ARE+ +DS I +N L +GTF +++ L+ Sbjct: 297 ENYYRLADDLSNAARELRVLIDDSQSIIFINLDSHRNVMMRLNLQLTMGTFSLSLFGLMG 356 Query: 398 GIFGMNLKSYLENNTWAFW 342 FGMNL+S LE + FW Sbjct: 357 VAFGMNLESSLEEDHRIFW 375
>MRS2L_HUMAN (Q9HD23) Magnesium transporter MRS2L, mitochondrial precursor| (MRS2-like protein) Length = 443 Score = 33.1 bits (74), Expect = 0.83 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%) Frame = -3 Query: 557 ESCHGQAERLLDSAREM----EDS---IAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIA 399 E+ + A+ L ++ARE+ +DS I +N L +GTF +++ L+ Sbjct: 297 ENYYRLADDLSNAARELRVLIDDSQSIIFINLDSHRNVMMRLNLQLTMGTFSLSLFGLMG 356 Query: 398 GIFGMNLKSYLENNTWAFW 342 FGMNL+S LE + FW Sbjct: 357 VAFGMNLESSLEEDHRIFW 375
>LPE10_YARLI (Q6C2P2) Inner membrane magnesium transporter LPE10, mitochondrial| precursor Length = 419 Score = 31.6 bits (70), Expect = 2.4 Identities = 16/71 (22%), Positives = 33/71 (46%) Frame = -3 Query: 575 NYLQRCESCHGQAERLLDSAREMEDSIAVNXXXXXXXXXXXXXXLQVGTFCVAVGALIAG 396 +Y ++ + QA + R E+ + + + + T AVGA +A Sbjct: 253 SYCKQADEIVQQASNVRSHIRSTEEIVNIIVDANRNALMLLELKVTIVTVGFAVGAFVAA 312 Query: 395 IFGMNLKSYLE 363 ++GMNL++++E Sbjct: 313 LYGMNLENFIE 323 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,208,587 Number of Sequences: 219361 Number of extensions: 1746765 Number of successful extensions: 3378 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 3309 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3378 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6912958834 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
