>CWC27_ASPFU (Q4WE62) Peptidyl-prolyl isomerase cwc27 (EC 5.2.1.8)|
          Length = 559

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 22/65 (33%), Positives = 29/65 (44%)
 Frame = -3

Query: 446 GPGGKCESSSSAGT*PGAQDRVDGRPEDRSAGRCRRRFVAVAEDALFRNHQGHLERAKDY 267
           GP GK   S+S  T   +Q + +  PED  A  C   F+A  +     +  G  E A D 
Sbjct: 420 GPHGKTSISASDTTKYTSQAKSNTEPEDEEAQLCDLHFIANCQSCKSWDDTGTAEEAPD- 478

Query: 266 RDDGR 252
            DD R
Sbjct: 479 -DDDR 482

>ASCL2_HUMAN (Q99929) Achaete-scute homolog 2 (HASH2)|
          Length = 193

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = +1

Query: 373 RPSTRS*APGQVPAEEEDSHLPPGPGKEGASAHGSPTATRSS 498
           RPS     PG  P     S     PG+ G+S  GSP +  SS
Sbjct: 126 RPSAPRGPPGTTPVAASPSRASSSPGRGGSSEPGSPRSAYSS 167

>WASF3_HUMAN (Q9UPY6) Wiskott-Aldrich syndrome protein family member 3|
           (WASP-family protein member 3) (WAVE-3 protein)
           (Verprolin homology domain-containing protein 3)
          Length = 502

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -1

Query: 490 SSPSVSRAPKLPPSLGLVANANPPPRQAP 404
           S+ S   AP  PPS GL+  A PPP   P
Sbjct: 374 SASSTHAAPPHPPSTGLLVTAPPPPGPPP 402

>ANR11_HUMAN (Q6UB99) Ankyrin repeat domain-containing protein 11 (Ankyrin|
            repeat-containing cofactor 1)
          Length = 2664

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +1

Query: 352  PADRSSGRPSTRS*APGQVPAEEEDSHLPPGPGKEGASAHGSPTAT 489
            P +R+ G P + S  P  VP E+     P G G +GA A G P A+
Sbjct: 2228 PEERARGDPDS-SVEPAPVPPEQR----PLGSGDQGAEAEGPPAAS 2268

>CEC1_CAEEL (P34618) Chromo domain protein cec-1|
          Length = 304

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -1

Query: 499 ASFSSPSVSRAPKLPPSLGLVANANPPPRQAPDLELKIA 383
           +S +S SVS+A    P+ G  A   PPP+++P    ++A
Sbjct: 80  SSKASASVSKASASTPARGAKAAPKPPPKKSPPKRQRLA 118

>ADCY1_HUMAN (Q08828) Adenylate cyclase type 1 (EC 4.6.1.1) (Adenylate cyclase|
           type I) (ATP pyrophosphate-lyase 1)
           (Ca(2+)/calmodulin-activated adenylyl cyclase)
          Length = 1119

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 22/64 (34%), Positives = 26/64 (40%)
 Frame = -3

Query: 467 AEAPSFPGPGGKCESSSSAGT*PGAQDRVDGRPEDRSAGRCRRRFVAVAEDALFRNHQGH 288
           A AP   G GG       AG  PG  +R  G    R    C   F     +ALFR +   
Sbjct: 2   AGAPRGGGGGG-----GGAGE-PGGAERAAGTSRRRGLRACDEEFACPELEALFRGYTLR 55

Query: 287 LERA 276
           LE+A
Sbjct: 56  LEQA 59

>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 574

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 16/42 (38%), Positives = 17/42 (40%)
 Frame = -3

Query: 446 GPGGKCESSSSAGT*PGAQDRVDGRPEDRSAGRCRRRFVAVA 321
           GPGG   S S  G   GA    DG+P  R   R      A A
Sbjct: 438 GPGGGSRSGSGGGRRDGASAGADGKPRPRRKPRVEGEAPAAA 479

>SFRP3_BOVIN (Q95117) Secreted frizzled-related protein 3 precursor (sFRP-3)|
           (Frizzled-related protein 1) (FrzB-1)
          Length = 325

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = -3

Query: 470 CAEAPSFPGPGGKCESSSSAGT*PGAQ---DRVDGRPEDRSAGRCRRRFVAVAEDALFRN 300
           C E P +    G C S  +  T  GA    D  +G     S+ RC+ + V   +   FRN
Sbjct: 136 CEELPVYDR--GVCISPEAIVTADGADFPMDSSNGNCRGASSERCKCKPVRATQKTYFRN 193

Query: 299 HQGHLERAK 273
           +  ++ RAK
Sbjct: 194 NYNYVIRAK 202

>TIM_MOUSE (Q9R1X4) Timeless homolog (mTim)|
          Length = 1197

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 352  PADRSSGRPSTRS*APGQVPAEEEDSHLPPGPGKEGASAHGSPT 483
            P+   +G  S R   P Q   EEED HLP    ++  S  G P+
Sbjct: 948  PSCMQNGEKSPRD--PWQEDPEEEDEHLPEDESEDEESEEGLPS 989


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,849,625
Number of Sequences: 219361
Number of extensions: 1102640
Number of successful extensions: 4398
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4351
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)