ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal39f20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103335.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 1e-33
2dbj|AK061783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 1e-33
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 109 1e-20
4gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 109 1e-20
5gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare str... 109 1e-20
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
7gb|AC139333.4| Mus musculus BAC clone RP24-83F12 from 3, complet... 44 0.64
8gb|AC166173.3| Mus musculus BAC clone RP23-101K10 from chromosom... 44 0.64
9ref|XM_454853.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E20031g ... 42 2.5
10gb|AC153003.14| Medicago truncatula clone mth2-96o5, complete se... 42 2.5
11emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 2.5
12gb|AC092650.2| Homo sapiens BAC clone RP11-429P7 from 2, complet... 42 2.5
13ref|NM_117853.2| Arabidopsis thaliana unknown protein AT4G17486 ... 40 10.0
14ref|XM_473409.1| Oryza sativa (japonica cultivar-group), predic... 40 10.0
15ref|NM_001016810.2| Xenopus tropicalis hypothetical protein LOC5... 40 10.0
16gb|AC102334.10| Mus musculus chromosome 15, clone RP24-544N15, c... 40 10.0
17emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 10.0
18ref|XM_814051.1| Trypanosoma cruzi strain CL Brener mucin TcMUCI... 40 10.0
19emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 10.0
20gb|AF106584.1| Caenorhabditis elegans cosmid F54A5, complete seq... 40 10.0
21gb|AC134521.41| Medicago truncatula clone mth2-31k24, complete s... 40 10.0
22emb|AL158135.5| Human DNA sequence from clone RP1-304H12 on chro... 40 10.0
23emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 10.0
24emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4,... 40 10.0
25emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, ... 40 10.0
26emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in ... 40 10.0
27gb|AE011887.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 10.0
28gb|AC183494.1| Brassica oleracea Contig C, complete sequence 40 10.0
29ref|XM_692348.1| PREDICTED: Danio rerio similar to Ankyrin repea... 40 10.0
30gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosom... 40 10.0
31gb|AY055104.1| Arabidopsis thaliana AT4g17486/AT4g17486 mRNA, co... 40 10.0
32gb|AF367279.1|AF367279 Arabidopsis thaliana AT4g17486/AT4g17486 ... 40 10.0
33gb|AF324997.2|AF324997 Arabidopsis thaliana AT4g17486 (AT4g17486... 40 10.0
34ref|NM_058397.2| Caenorhabditis elegans F54A5.2 (F54A5.2) mRNA, ... 40 10.0
35emb|AL112997.1|CNS01AJ1 Botrytis cinerea strain T4 cDNA library 40 10.0
36dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 10.0
37gb|AF036423.2|AF036423 Trypanosoma cruzi mucin-like protein (EMU... 40 10.0
38gb|AC113306.6| Mus musculus chromosome 7, clone RP23-434A16, com... 40 10.0
39gb|AC102198.9| Mus musculus chromosome 15, clone RP24-499H13, co... 40 10.0
40dbj|AK104979.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 10.0
41dbj|AK073099.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 10.0
42emb|BX322595.8| Zebrafish DNA sequence from clone RP71-69P9 in l... 40 10.0
43emb|CR855576.2| Xenopus tropicalis finished cDNA, clone TEgg142j23 40 10.0
44dbj|AP001891.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 10.0
45gb|AF031826.1|AF031826 Mus musculus leukocystatin gene, complete... 40 10.0
46gb|AC147972.3| Gallus gallus BAC clone CH261-78M4 from chromosom... 40 10.0
47gb|AC148461.2| Xenopus tropicalis clone CH216-3P14, complete seq... 40 10.0
48gb|AC149899.2| Xenopus tropicalis clone ISB-339J14, complete seq... 40 10.0
49emb|AL845174.4| Mouse DNA sequence from clone RP23-156P22 on chr... 40 10.0 
>dbj|AK103335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125P20, full
           insert sequence
          Length = 1397

 Score =  153 bits (77), Expect = 1e-33
 Identities = 128/145 (88%)
 Strand = Plus / Minus

                                                                       
Query: 584 catctctgaccgctgaaaccttgatgttttctggcagcacacagttgcagacggaaccta 643
           ||||| |||| || |||||||||||| |||| ||||| |||||||||||||  |||||||
Sbjct: 688 catctttgacagcggaaaccttgatgctttcaggcagtacacagttgcagaaagaaccta 629

                                                                       
Query: 644 atctggcaagtcgattcacccatccaggagttggctttccggtcaaacgcttgcagacgt 703
           |||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||| ||
Sbjct: 628 atctggcaagtcgattgacccatccaggaattggctttccagtcagacgcttgcagatgt 569

                                    
Query: 704 cagctgtgaaatggttacagttctt 728
           | ||||| ||||| ||||| |||||
Sbjct: 568 ctgctgtaaaatgattacaattctt 544



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 420 caattacaagctctctcttccaggagttaacgtcttgtcttttg 463
           |||||||||||| || || |||||||||||  |||| |||||||
Sbjct: 852 caattacaagctatccctgccaggagttaatatcttatcttttg 809
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>dbj|AK061783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E05, full
           insert sequence
          Length = 1242

 Score =  153 bits (77), Expect = 1e-33
 Identities = 128/145 (88%)
 Strand = Plus / Minus

                                                                       
Query: 584 catctctgaccgctgaaaccttgatgttttctggcagcacacagttgcagacggaaccta 643
           ||||| |||| || |||||||||||| |||| ||||| |||||||||||||  |||||||
Sbjct: 648 catctttgacagcggaaaccttgatgctttcaggcagtacacagttgcagaaagaaccta 589

                                                                       
Query: 644 atctggcaagtcgattcacccatccaggagttggctttccggtcaaacgcttgcagacgt 703
           |||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||| ||
Sbjct: 588 atctggcaagtcgattgacccatccaggaattggctttccagtcagacgcttgcagatgt 529

                                    
Query: 704 cagctgtgaaatggttacagttctt 728
           | ||||| ||||| ||||| |||||
Sbjct: 528 ctgctgtaaaatgattacaattctt 504



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 420 caattacaagctctctcttccaggagttaacgtcttgtcttttg 463
           |||||||||||| || || |||||||||||  |||| |||||||
Sbjct: 812 caattacaagctatccctgccaggagttaatatcttatcttttg 769
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                         
Query: 638   aacctaatctggcaagtcgattcacccatccaggagttggctttccggtcaaacgcttgc 697
             |||||||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||
Sbjct: 80716 aacctaatctggcaagtcgattgacccatccaggaattggctttccagtcagacgcttgc 80657

                                            
Query: 698   agacgtcagctgtgaaatggttacagttctt 728
             ||| ||| ||||| ||||| ||||| |||||
Sbjct: 80656 agatgtctgctgtaaaatgattacaattctt 80626



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 584   catctctgaccgctgaaaccttgatgttttctggcagcacacagttgcaga 634
             ||||| |||| || |||||||||||| |||| ||||| |||||||||||||
Sbjct: 80846 catctttgacagcggaaaccttgatgctttcaggcagtacacagttgcaga 80796



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 420   caattacaagctctctcttccaggagttaacgtcttgtcttttg 463
             |||||||||||| || || |||||||||||  |||| |||||||
Sbjct: 81816 caattacaagctatccctgccaggagttaatatcttatcttttg 81773
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>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                         
Query: 638   aacctaatctggcaagtcgattcacccatccaggagttggctttccggtcaaacgcttgc 697
             |||||||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||
Sbjct: 14716 aacctaatctggcaagtcgattgacccatccaggaattggctttccagtcagacgcttgc 14657

                                            
Query: 698   agacgtcagctgtgaaatggttacagttctt 728
             ||| ||| ||||| ||||| ||||| |||||
Sbjct: 14656 agatgtctgctgtaaaatgattacaattctt 14626



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 584   catctctgaccgctgaaaccttgatgttttctggcagcacacagttgcaga 634
             ||||| |||| || |||||||||||| |||| ||||| |||||||||||||
Sbjct: 14846 catctttgacagcggaaaccttgatgctttcaggcagtacacagttgcaga 14796



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 420   caattacaagctctctcttccaggagttaacgtcttgtcttttg 463
             |||||||||||| || || |||||||||||  |||| |||||||
Sbjct: 15816 caattacaagctatccctgccaggagttaatatcttatcttttg 15773
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>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0079B22, from chromosome 3, complete sequence
          Length = 125217

 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                         
Query: 638   aacctaatctggcaagtcgattcacccatccaggagttggctttccggtcaaacgcttgc 697
             |||||||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||
Sbjct: 44502 aacctaatctggcaagtcgattgacccatccaggaattggctttccagtcagacgcttgc 44561

                                            
Query: 698   agacgtcagctgtgaaatggttacagttctt 728
             ||| ||| ||||| ||||| ||||| |||||
Sbjct: 44562 agatgtctgctgtaaaatgattacaattctt 44592



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 584   catctctgaccgctgaaaccttgatgttttctggcagcacacagttgcaga 634
             ||||| |||| || |||||||||||| |||| ||||| |||||||||||||
Sbjct: 44372 catctttgacagcggaaaccttgatgctttcaggcagtacacagttgcaga 44422



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 420   caattacaagctctctcttccaggagttaacgtcttgtcttttg 463
             |||||||||||| || || |||||||||||  |||| |||||||
Sbjct: 43402 caattacaagctatccctgccaggagttaatatcttatcttttg 43445
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             complete sequence
          Length = 36192742

 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                         
Query: 638   aacctaatctggcaagtcgattcacccatccaggagttggctttccggtcaaacgcttgc 697
             |||||||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||
Sbjct: 80716 aacctaatctggcaagtcgattgacccatccaggaattggctttccagtcagacgcttgc 80657

                                            
Query: 698   agacgtcagctgtgaaatggttacagttctt 728
             ||| ||| ||||| ||||| ||||| |||||
Sbjct: 80656 agatgtctgctgtaaaatgattacaattctt 80626



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 584   catctctgaccgctgaaaccttgatgttttctggcagcacacagttgcaga 634
             ||||| |||| || |||||||||||| |||| ||||| |||||||||||||
Sbjct: 80846 catctttgacagcggaaaccttgatgctttcaggcagtacacagttgcaga 80796



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 420   caattacaagctctctcttccaggagttaacgtcttgtcttttg 463
             |||||||||||| || || |||||||||||  |||| |||||||
Sbjct: 81816 caattacaagctatccctgccaggagttaatatcttatcttttg 81773
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>gb|AC139333.4| Mus musculus BAC clone RP24-83F12 from 3, complete sequence
          Length = 162197

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 143   caaaaacaatcaacagttacaatcaa 168
             |||||||||||||||||| |||||||
Sbjct: 85325 caaaaacaatcaacagtttcaatcaa 85300
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>gb|AC166173.3| Mus musculus BAC clone RP23-101K10 from chromosome 3, complete
            sequence
          Length = 196177

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 143  caaaaacaatcaacagttacaatcaa 168
            |||||||||||||||||| |||||||
Sbjct: 9327 caaaaacaatcaacagtttcaatcaa 9352
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>ref|XM_454853.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E20031g predicted mRNA
          Length = 1752

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 257  tctctacatcaacatcaacat 277
            |||||||||||||||||||||
Sbjct: 1387 tctctacatcaacatcaacat 1367
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>gb|AC153003.14| Medicago truncatula clone mth2-96o5, complete sequence
          Length = 93881

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 261   tacatcaacatcaacatatat 281
             |||||||||||||||||||||
Sbjct: 76675 tacatcaacatcaacatatat 76695
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>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2234072

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 257     tctctacatcaacatcaacat 277
               |||||||||||||||||||||
Sbjct: 1774899 tctctacatcaacatcaacat 1774919
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>gb|AC092650.2| Homo sapiens BAC clone RP11-429P7 from 2, complete sequence
          Length = 179098

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 596    ctgaaaccttgatgttttctg 616
              |||||||||||||||||||||
Sbjct: 152744 ctgaaaccttgatgttttctg 152764
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>ref|NM_117853.2| Arabidopsis thaliana unknown protein AT4G17486 mRNA, complete cds
          Length = 1083

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 709 gtgaaatggttacagttctt 728
           ||||||||||||||||||||
Sbjct: 531 gtgaaatggttacagttctt 512
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>ref|XM_473409.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 624

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 652 agtcgattcacccatccagg 671
           ||||||||||||||||||||
Sbjct: 413 agtcgattcacccatccagg 394
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>ref|NM_001016810.2| Xenopus tropicalis hypothetical protein LOC549564 (LOC549564), mRNA
          Length = 2458

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   ccatgaaataaacccaacag 105
            ||||||||||||||||||||
Sbjct: 1658 ccatgaaataaacccaacag 1639
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>gb|AC102334.10| Mus musculus chromosome 15, clone RP24-544N15, complete sequence
          Length = 162721

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 422  attacaagctctctcttcca 441
            ||||||||||||||||||||
Sbjct: 6636 attacaagctctctcttcca 6617
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 513     gatgtcgctgtcgtcgacca 532
               ||||||||||||||||||||
Sbjct: 3015015 gatgtcgctgtcgtcgacca 3014996
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>ref|XM_814051.1| Trypanosoma cruzi strain CL Brener mucin TcMUCII
           (Tc00.1047053510363.170) partial mRNA
          Length = 624

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 tcagtatcagtatctgccac 322
           ||||||||||||||||||||
Sbjct: 89  tcagtatcagtatctgccac 70
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>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21,
              complete sequence
          Length = 141787

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 652    agtcgattcacccatccagg 671
              ||||||||||||||||||||
Sbjct: 137633 agtcgattcacccatccagg 137614
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>gb|AF106584.1| Caenorhabditis elegans cosmid F54A5, complete sequence
          Length = 40018

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 523   tcgtcgaccatcgacgtgtccgac 546
             |||||||| |||||||||||||||
Sbjct: 12018 tcgtcgacaatcgacgtgtccgac 11995
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>gb|AC134521.41| Medicago truncatula clone mth2-31k24, complete sequence
          Length = 132267

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   atcaacatcaacatatatgt 283
             ||||||||||||||||||||
Sbjct: 54182 atcaacatcaacatatatgt 54201
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>emb|AL158135.5| Human DNA sequence from clone RP1-304H12 on chromosome 6, complete
             sequence
          Length = 64854

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   aaaaacaatcaacagttaca 163
             ||||||||||||||||||||
Sbjct: 20339 aaaaacaatcaacagttaca 20320
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>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8
          Length = 207674

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 709    gtgaaatggttacagttctt 728
              ||||||||||||||||||||
Sbjct: 115234 gtgaaatggttacagttctt 115253
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>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10,
             complete sequence
          Length = 133967

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 652   agtcgattcacccatccagg 671
             ||||||||||||||||||||
Sbjct: 54191 agtcgattcacccatccagg 54172
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>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46
          Length = 198788

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 709    gtgaaatggttacagttctt 728
              ||||||||||||||||||||
Sbjct: 104599 gtgaaatggttacagttctt 104618
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>emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in linkage group 5,
             complete sequence
          Length = 186135

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 132   cactctactctcaaaaacaatcaa 155
             |||||| |||||||||||||||||
Sbjct: 39037 cactctcctctcaaaaacaatcaa 39014
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>gb|AE011887.1| Xanthomonas axonopodis pv. citri str. 306,  section 265 of 469 of the
            complete genome
          Length = 13339

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 513  gatgtcgctgtcgtcgacca 532
            ||||||||||||||||||||
Sbjct: 3228 gatgtcgctgtcgtcgacca 3209
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>gb|AC183494.1| Brassica oleracea Contig C, complete sequence
          Length = 285752

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 709    gtgaaatggttacagttctt 728
              ||||||||||||||||||||
Sbjct: 178788 gtgaaatggttacagttctt 178807
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>ref|XM_692348.1| PREDICTED: Danio rerio similar to Ankyrin repeat and MYND domain
           protein 1 (Testis specific ankyrin-like protein 1)
           (Zinc-finger MYND domain protein 13) (LOC568987), mRNA
          Length = 3955

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 402 ttcataaataacctgaaaca 421
           ||||||||||||||||||||
Sbjct: 165 ttcataaataacctgaaaca 184
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>gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosome 12, complete sequence
          Length = 196540

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 426    caagctctctcttccaggag 445
              ||||||||||||||||||||
Sbjct: 147368 caagctctctcttccaggag 147349
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>gb|AY055104.1| Arabidopsis thaliana AT4g17486/AT4g17486 mRNA, complete cds
          Length = 675

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 709 gtgaaatggttacagttctt 728
           ||||||||||||||||||||
Sbjct: 386 gtgaaatggttacagttctt 367
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>gb|AF367279.1|AF367279 Arabidopsis thaliana AT4g17486/AT4g17486 mRNA, complete cds
          Length = 1047

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 709 gtgaaatggttacagttctt 728
           ||||||||||||||||||||
Sbjct: 495 gtgaaatggttacagttctt 476
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>gb|AF324997.2|AF324997 Arabidopsis thaliana AT4g17486 (AT4g17486/AT4g17486) mRNA, complete
           cds
          Length = 905

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 709 gtgaaatggttacagttctt 728
           ||||||||||||||||||||
Sbjct: 362 gtgaaatggttacagttctt 343
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>ref|NM_058397.2| Caenorhabditis elegans F54A5.2 (F54A5.2) mRNA, complete cds
          Length = 1176

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 523 tcgtcgaccatcgacgtgtccgac 546
           |||||||| |||||||||||||||
Sbjct: 961 tcgtcgacaatcgacgtgtccgac 984
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>emb|AL112997.1|CNS01AJ1 Botrytis cinerea strain T4 cDNA library
          Length = 780

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 468 tatgacgtcgctgtttggtg 487
           ||||||||||||||||||||
Sbjct: 298 tatgacgtcgctgtttggtg 317
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 652      agtcgattcacccatccagg 671
                ||||||||||||||||||||
Sbjct: 27403037 agtcgattcacccatccagg 27403018
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>gb|AF036423.2|AF036423 Trypanosoma cruzi mucin-like protein (EMUCe-24m16) mRNA, complete
           cds
          Length = 1008

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 tcagtatcagtatctgccac 322
           ||||||||||||||||||||
Sbjct: 123 tcagtatcagtatctgccac 104
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>gb|AC113306.6| Mus musculus chromosome 7, clone RP23-434A16, complete sequence
          Length = 200177

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   aaacaacccagaagcaggta 395
             ||||||||||||||||||||
Sbjct: 79041 aaacaacccagaagcaggta 79022
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>gb|AC102198.9| Mus musculus chromosome 15, clone RP24-499H13, complete sequence
          Length = 139134

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    attacaagctctctcttcca 441
              ||||||||||||||||||||
Sbjct: 130519 attacaagctctctcttcca 130500
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>dbj|AK104979.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-C04, full
           insert sequence
          Length = 1188

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 652 agtcgattcacccatccagg 671
           ||||||||||||||||||||
Sbjct: 582 agtcgattcacccatccagg 563
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>dbj|AK073099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033015I19, full
           insert sequence
          Length = 1168

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 652 agtcgattcacccatccagg 671
           ||||||||||||||||||||
Sbjct: 587 agtcgattcacccatccagg 568
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>emb|BX322595.8| Zebrafish DNA sequence from clone RP71-69P9 in linkage group 22, complete
              sequence
          Length = 147460

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    ttcataaataacctgaaaca 421
              ||||||||||||||||||||
Sbjct: 124886 ttcataaataacctgaaaca 124867
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>emb|CR855576.2| Xenopus tropicalis finished cDNA, clone TEgg142j23
          Length = 2458

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   ccatgaaataaacccaacag 105
            ||||||||||||||||||||
Sbjct: 1658 ccatgaaataaacccaacag 1639
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>dbj|AP001891.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-356E17, complete
              sequence
          Length = 210691

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    gctctctcttccaggagtta 448
              ||||||||||||||||||||
Sbjct: 101054 gctctctcttccaggagtta 101035
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>gb|AF031826.1|AF031826 Mus musculus leukocystatin gene, complete cds
          Length = 10023

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 238  acccactatggtacctccct 257
            ||||||||||||||||||||
Sbjct: 2572 acccactatggtacctccct 2591
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>gb|AC147972.3| Gallus gallus BAC clone CH261-78M4 from chromosome unknown, complete
              sequence
          Length = 197959

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 54     ttgtacttacacaacaaaacaatt 77
              ||||||||||||| ||||||||||
Sbjct: 165416 ttgtacttacacatcaaaacaatt 165393
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>gb|AC148461.2| Xenopus tropicalis clone CH216-3P14, complete sequence
          Length = 177929

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    ccatgaaataaacccaacag 105
             ||||||||||||||||||||
Sbjct: 29709 ccatgaaataaacccaacag 29690
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>gb|AC149899.2| Xenopus tropicalis clone ISB-339J14, complete sequence
          Length = 82063

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    ccatgaaataaacccaacag 105
             ||||||||||||||||||||
Sbjct: 75080 ccatgaaataaacccaacag 75061



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    ccatgaaataaacccaacag 105
             ||||||||||||||||||||
Sbjct: 74968 ccatgaaataaacccaacag 74949
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>emb|AL845174.4| Mouse DNA sequence from clone RP23-156P22 on chromosome 2, complete
             sequence
          Length = 216475

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   acccactatggtacctccct 257
             ||||||||||||||||||||
Sbjct: 16589 acccactatggtacctccct 16608


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,370,582
Number of Sequences: 3902068
Number of extensions: 6370582
Number of successful extensions: 123500
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123236
Number of HSP's gapped (non-prelim): 264
length of query: 728
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 705
effective length of database: 17,143,297,704
effective search space: 12086024881320
effective search space used: 12086024881320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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