ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal38p11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467970.1| Oryza sativa (japonica cultivar-group), mRNA 103 4e-19
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 103 4e-19
3dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic D... 103 4e-19
4dbj|AK069611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 4e-19
5dbj|AB016065.1| Oryza sativa (japonica cultivar-group) mRNA for ... 103 4e-19
6gb|BT018466.1| Zea mays clone EL01N0417F11.d mRNA sequence 96 1e-16
7gb|AY104226.1| Zea mays PCO060710 mRNA sequence 96 1e-16
8dbj|AB016064.1| Zea mays mRNA for mitochondrial phosphate transp... 96 1e-16
9gb|BT014277.1| Lycopersicon esculentum clone 133507F, mRNA sequence 76 9e-11
10ref|NM_187525.1| Oryza sativa (japonica cultivar-group), predic... 50 0.005
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.005
12gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.005
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
14dbj|AK058971.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
15gb|AF452453.1|AF452453 Glycine max phosphate transporter mRNA, c... 46 0.081
16emb|AL136536.1|SPBC1703 S.pombe chromosome II cosmid c1703 44 0.32
17dbj|AP001295.1| Mus musculus genomic DNA, chromosome 7, clone:B9... 44 0.32
18ref|NM_001022127.1| Schizosaccharomyces pombe 972h- hypothetical... 44 0.32
19gb|AC012540.12| Mus musculus chromosome 7, clone RP23-101N20, co... 44 0.32
20dbj|AB016063.1| Glycine max mRNA for mitochondrial phosphate tra... 44 0.32
21gb|AC140448.3| Mus musculus BAC clone RP23-54G12 from chromosome... 42 1.3
22gb|AC138381.10| Mus musculus chromosome 6, clone RP24-328J8, com... 42 1.3
23emb|AL592144.5| Human DNA sequence from clone RP11-476B1 on chro... 42 1.3
24emb|AL139097.16| Human DNA sequence from clone RP1-125E8 on chro... 42 1.3
25gb|AC092290.3| Homo sapiens chromosome 5 clone CTD-2376K3, compl... 42 1.3
26gb|AC008610.7| Homo sapiens chromosome 5 clone CTB-129O4, comple... 42 1.3
27gb|DQ066599.1| Homo sapiens mitogen-activated protein kinase 9 (... 42 1.3
28ref|XM_652740.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 5.0
29gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 5.0
30gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, co... 40 5.0
31emb|BX901957.4| Zebrafish DNA sequence from clone CH211-150G5 in... 40 5.0
32gb|AC154836.2| Mus musculus BAC clone RP24-574D17 from chromosom... 40 5.0
33emb|AL662896.9| Human DNA sequence from clone RP13-218H24 on chr... 40 5.0
34emb|AL512655.17| Human DNA sequence from clone RP11-536C2 on chr... 40 5.0
35emb|AL391883.17| Human DNA sequence from clone RP11-91K11 on chr... 40 5.0
36emb|AL445188.5| Human DNA sequence from clone RP11-260E14 on chr... 40 5.0
37gb|AC022203.4|AC022203 Homo sapiens BAC clone RP11-490K15 from 1... 40 5.0
38dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
39gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Can... 40 5.0
40gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
41emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb... 40 5.0 
>ref|XM_467970.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1612

 Score =  103 bits (52), Expect = 4e-19
 Identities = 75/82 (91%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    acaggtgatggcanaacctgcgctctaacagccttgctgtcctaaaacttattatg--tc 58
            |||||||||| || |||||| ||||||||||||||||||||| |||| ||||||||  ||
Sbjct: 1534 acaggtgatgccaaaacctgagctctaacagccttgctgtccaaaaatttattatgtatc 1475

                                  
Query: 59   aagcatcaaactttcccggggg 80
            ||||||||||||||||||||||
Sbjct: 1474 aagcatcaaactttcccggggg 1453



 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 283  caccgccggtggtcgggagtcccaccataactttaaacgcatcatagattccccactgag 342
            |||| ||||| || || ||||| ||||| |||||||| |||||||| || ||||| ||||
Sbjct: 1233 caccaccggttgttggaagtccaaccatgactttaaaagcatcataaataccccattgag 1174

                                             
Query: 343  caccagtaagagtaccaatnatgacgatacgaa 375
            ||||||||||||| ||||| || || |||||||
Sbjct: 1173 caccagtaagagttccaatcataacaatacgaa 1141
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  103 bits (52), Expect = 4e-19
 Identities = 75/82 (91%), Gaps = 2/82 (2%)
 Strand = Plus / Plus

                                                                            
Query: 1        acaggtgatggcanaacctgcgctctaacagccttgctgtcctaaaacttattatg--tc 58
                |||||||||| || |||||| ||||||||||||||||||||| |||| ||||||||  ||
Sbjct: 32337958 acaggtgatgccaaaacctgagctctaacagccttgctgtccaaaaatttattatgtatc 32338017

                                      
Query: 59       aagcatcaaactttcccggggg 80
                ||||||||||||||||||||||
Sbjct: 32338018 aagcatcaaactttcccggggg 32338039



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                            
Query: 300      agtcccaccataactttaaacgcatcatagattccccactgagcaccagtaagagtacca 359
                ||||| ||||| |||||||| |||||||| || ||||| ||||||||||||||||| |||
Sbjct: 32338372 agtccaaccatgactttaaaagcatcataaataccccattgagcaccagtaagagttcca 32338431

                                
Query: 360      atnatgacgatacgaa 375
                || || || |||||||
Sbjct: 32338432 atcataacaatacgaa 32338447
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>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A11
          Length = 132352

 Score =  103 bits (52), Expect = 4e-19
 Identities = 75/82 (91%), Gaps = 2/82 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      acaggtgatggcanaacctgcgctctaacagccttgctgtcctaaaacttattatg--tc 58
              |||||||||| || |||||| ||||||||||||||||||||| |||| ||||||||  ||
Sbjct: 113790 acaggtgatgccaaaacctgagctctaacagccttgctgtccaaaaatttattatgtatc 113849

                                    
Query: 59     aagcatcaaactttcccggggg 80
              ||||||||||||||||||||||
Sbjct: 113850 aagcatcaaactttcccggggg 113871



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                          
Query: 300    agtcccaccataactttaaacgcatcatagattccccactgagcaccagtaagagtacca 359
              ||||| ||||| |||||||| |||||||| || ||||| ||||||||||||||||| |||
Sbjct: 114204 agtccaaccatgactttaaaagcatcataaataccccattgagcaccagtaagagttcca 114263

                              
Query: 360    atnatgacgatacgaa 375
              || || || |||||||
Sbjct: 114264 atcataacaatacgaa 114279
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>dbj|AK069611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022H13, full
            insert sequence
          Length = 1612

 Score =  103 bits (52), Expect = 4e-19
 Identities = 75/82 (91%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    acaggtgatggcanaacctgcgctctaacagccttgctgtcctaaaacttattatg--tc 58
            |||||||||| || |||||| ||||||||||||||||||||| |||| ||||||||  ||
Sbjct: 1534 acaggtgatgccaaaacctgagctctaacagccttgctgtccaaaaatttattatgtatc 1475

                                  
Query: 59   aagcatcaaactttcccggggg 80
            ||||||||||||||||||||||
Sbjct: 1474 aagcatcaaactttcccggggg 1453



 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 283  caccgccggtggtcgggagtcccaccataactttaaacgcatcatagattccccactgag 342
            |||| ||||| || || ||||| ||||| |||||||| |||||||| || ||||| ||||
Sbjct: 1233 caccaccggttgttggaagtccaaccatgactttaaaagcatcataaataccccattgag 1174

                                             
Query: 343  caccagtaagagtaccaatnatgacgatacgaa 375
            ||||||||||||| ||||| || || |||||||
Sbjct: 1173 caccagtaagagttccaatcataacaatacgaa 1141
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>dbj|AB016065.1| Oryza sativa (japonica cultivar-group) mRNA for mitochondrial
            phosphate transporter, complete cds
          Length = 1552

 Score =  103 bits (52), Expect = 4e-19
 Identities = 75/82 (91%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    acaggtgatggcanaacctgcgctctaacagccttgctgtcctaaaacttattatg--tc 58
            |||||||||| || |||||| ||||||||||||||||||||| |||| ||||||||  ||
Sbjct: 1499 acaggtgatgccaaaacctgagctctaacagccttgctgtccaaaaatttattatgtatc 1440

                                  
Query: 59   aagcatcaaactttcccggggg 80
            ||||||||||||||||||||||
Sbjct: 1439 aagcatcaaactttcccggggg 1418



 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 283  caccgccggtggtcgggagtcccaccataactttaaacgcatcatagattccccactgag 342
            |||| ||||| || || ||||| ||||| |||||||| |||||||| || ||||| ||||
Sbjct: 1198 caccaccggttgttggaagtccaaccatgactttaaaagcatcataaataccccattgag 1139

                                             
Query: 343  caccagtaagagtaccaatnatgacgatacgaa 375
            ||||||||||||| ||||| || || |||||||
Sbjct: 1138 caccagtaagagttccaatcataacaatacgaa 1106
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>gb|BT018466.1| Zea mays clone EL01N0417F11.d mRNA sequence
          Length = 958

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                       
Query: 297 gggagtcccaccataactttaaacgcatcatagattccccactgagcaccagtaagagta 356
           |||||||| ||||| ||||| || ||||| || ||||||||||||||||||||||| |||
Sbjct: 611 gggagtccaaccatcactttgaatgcatcgtaaattccccactgagcaccagtaagggta 552

                              
Query: 357 ccaatnatgacgatacgaa 375
           ||||| |||||||||||||
Sbjct: 551 ccaatcatgacgatacgaa 533



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 92  cctatttcgcctgcttaatgagttcctctcatc 124
           ||||||||||||| |||||||||||||||||||
Sbjct: 825 cctatttcgcctgtttaatgagttcctctcatc 793
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>gb|AY104226.1| Zea mays PCO060710 mRNA sequence
          Length = 1639

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                        
Query: 297  gggagtcccaccataactttaaacgcatcatagattccccactgagcaccagtaagagta 356
            |||||||| ||||| ||||| || ||||| || ||||||||||||||||||||||| |||
Sbjct: 1180 gggagtccaaccatcactttgaatgcatcgtaaattccccactgagcaccagtaagggta 1121

                               
Query: 357  ccaatnatgacgatacgaa 375
            ||||| |||||||||||||
Sbjct: 1120 ccaatcatgacgatacgaa 1102



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 92   cctatttcgcctgcttaatgagttcctctcatc 124
            ||||||||||||| |||||||||||||||||||
Sbjct: 1394 cctatttcgcctgtttaatgagttcctctcatc 1362



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 15   aacctgcgctctaacagccttgctgtcctaaaacttattatg 56
            |||||||||||||| ||| |||| |||||| || ||||||||
Sbjct: 1470 aacctgcgctctaagagcgttgccgtcctacaaattattatg 1429
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>dbj|AB016064.1| Zea mays mRNA for mitochondrial phosphate transporter, complete cds
          Length = 1444

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                        
Query: 297  gggagtcccaccataactttaaacgcatcatagattccccactgagcaccagtaagagta 356
            |||||||| ||||| ||||| || ||||| || ||||||||||||||||||||||| |||
Sbjct: 1088 gggagtccaaccatcactttgaatgcatcgtaaattccccactgagcaccagtaagggta 1029

                               
Query: 357  ccaatnatgacgatacgaa 375
            ||||| |||||||||||||
Sbjct: 1028 ccaatcatgacgatacgaa 1010



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 92   cctatttcgcctgcttaatgagttcctctcatc 124
            ||||||||||||| |||||||||||||||||||
Sbjct: 1300 cctatttcgcctgtttaatgagttcctctcatc 1268
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>gb|BT014277.1| Lycopersicon esculentum clone 133507F, mRNA sequence
          Length = 1482

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                 
Query: 321  gcatcatagattccccactgagcaccagtaagagtaccaatnatgacgatacg 373
            ||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||
Sbjct: 1132 gcatcatagattccccattgagcaccagtaagagttccaatcatgacaatacg 1080
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>ref|NM_187525.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1137

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 312  actttaaacgcatcatagattccccactgagcaccagtaagagtaccaa 360
            |||||||| ||||||||  || |||| ||||| ||||||||||||||||
Sbjct: 1049 actttaaatgcatcatatgttgcccattgagctccagtaagagtaccaa 1001
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                
Query: 312     actttaaacgcatcatagattccccactgagcaccagtaagagtaccaa 360
               |||||||| ||||||||  || |||| ||||| ||||||||||||||||
Sbjct: 8631745 actttaaatgcatcatatgttgcccattgagctccagtaagagtaccaa 8631697
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>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
              complete sequence
          Length = 137327

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 312    actttaaacgcatcatagattccccactgagcaccagtaagagtaccaa 360
              |||||||| ||||||||  || |||| ||||| ||||||||||||||||
Sbjct: 112717 actttaaatgcatcatatgttgcccattgagctccagtaagagtaccaa 112669
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                
Query: 312     actttaaacgcatcatagattccccactgagcaccagtaagagtaccaa 360
               |||||||| ||||||||  || |||| ||||| ||||||||||||||||
Sbjct: 8629580 actttaaatgcatcatatgttgcccattgagctccagtaagagtaccaa 8629532
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>dbj|AK058971.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D01, full
            insert sequence
          Length = 1849

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 312  actttaaacgcatcatagattccccactgagcaccagtaagagtaccaa 360
            |||||||| ||||||||  || |||| ||||| ||||||||||||||||
Sbjct: 1392 actttaaatgcatcatatgttgcccattgagctccagtaagagtaccaa 1344
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>gb|AF452453.1|AF452453 Glycine max phosphate transporter mRNA, complete cds; nuclear gene
            for mitochondrial product
          Length = 1470

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 312  actttaaacgcatcatagattccccactgagcaccagtaagagtaccaatnatgacgata 371
            ||||| || |||||||| |||||||| || || ||||||||||| ||||| || || |||
Sbjct: 1016 actttgaatgcatcatatattccccattgggctccagtaagagttccaatcataacaata 957

              
Query: 372  cg 373
            ||
Sbjct: 956  cg 955
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>emb|AL136536.1|SPBC1703 S.pombe chromosome II cosmid c1703
          Length = 32799

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 339   tgagcaccagtaagagtaccaatnatgacgatacgaa 375
             ||||||||||| | ||||||||| ||||| |||||||
Sbjct: 25215 tgagcaccagtcaaagtaccaatcatgactatacgaa 25251
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>dbj|AP001295.1| Mus musculus genomic DNA, chromosome 7, clone:B96, complete sequence
          Length = 191373

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 32     ccttgctgtcctaaaacttattatgt 57
              ||||||||||||||||||| ||||||
Sbjct: 168528 ccttgctgtcctaaaacttgttatgt 168503
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>ref|NM_001022127.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPBC1703.13c), partial mRNA
          Length = 936

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 339 tgagcaccagtaagagtaccaatnatgacgatacgaa 375
           ||||||||||| | ||||||||| ||||| |||||||
Sbjct: 878 tgagcaccagtcaaagtaccaatcatgactatacgaa 842
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>gb|AC012540.12| Mus musculus chromosome 7, clone RP23-101N20, complete sequence
          Length = 211091

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 32     ccttgctgtcctaaaacttattatgt 57
              ||||||||||||||||||| ||||||
Sbjct: 124823 ccttgctgtcctaaaacttgttatgt 124848
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>dbj|AB016063.1| Glycine max mRNA for mitochondrial phosphate transporter, complete
            cds
          Length = 1640

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 312  actttaaacgcatcatagattccccactgagcaccagtaagagtaccaat 361
            ||||| || |||||||| |||||||| || || ||||||||||| |||||
Sbjct: 1203 actttgaatgcatcatatattccccattgggctccagtaagagttccaat 1154
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>gb|AC140448.3| Mus musculus BAC clone RP23-54G12 from chromosome 9, complete sequence
          Length = 213580

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     agccttgctgtcctaaaactt 50
              |||||||||||||||||||||
Sbjct: 129176 agccttgctgtcctaaaactt 129196
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>gb|AC138381.10| Mus musculus chromosome 6, clone RP24-328J8, complete sequence
          Length = 130895

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 36    gctgtcctaaaacttattatgtcaa 60
             ||||||||| |||||||||||||||
Sbjct: 91948 gctgtcctagaacttattatgtcaa 91972
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>emb|AL592144.5| Human DNA sequence from clone RP11-476B1 on chromosome 1 Contains a novel
              gene, complete sequence
          Length = 197322

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 229    tcatagcagcaaaaatcaatc 249
              |||||||||||||||||||||
Sbjct: 120427 tcatagcagcaaaaatcaatc 120447
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>emb|AL139097.16| Human DNA sequence from clone RP1-125E8 on chromosome 6, complete
             sequence
          Length = 112533

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 235   cagcaaaaatcaatcaagctg 255
             |||||||||||||||||||||
Sbjct: 95794 cagcaaaaatcaatcaagctg 95774
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>gb|AC092290.3| Homo sapiens chromosome 5 clone CTD-2376K3, complete sequence
          Length = 80527

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   caataaccacaaccaggaata 223
             |||||||||||||||||||||
Sbjct: 20038 caataaccacaaccaggaata 20058
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>gb|AC008610.7| Homo sapiens chromosome 5 clone CTB-129O4, complete sequence
          Length = 145242

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 203   caataaccacaaccaggaata 223
             |||||||||||||||||||||
Sbjct: 19800 caataaccacaaccaggaata 19780
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>gb|DQ066599.1| Homo sapiens mitogen-activated protein kinase 9 (MAPK9) gene, complete
             cds
          Length = 48787

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   caataaccacaaccaggaata 223
             |||||||||||||||||||||
Sbjct: 11277 caataaccacaaccaggaata 11297
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>ref|XM_652740.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0228.2), mRNA
          Length = 2748

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 tggagcaccgccggtggtcg 297
           ||||||||||||||||||||
Sbjct: 219 tggagcaccgccggtggtcg 238
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>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2
             of 11 of the complete sequence
          Length = 613322

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   aaaaatcaatcaagctgatt 258
             ||||||||||||||||||||
Sbjct: 52211 aaaaatcaatcaagctgatt 52192
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>gb|AC101882.14| Mus musculus chromosome 10, clone RP23-394M6, complete sequence
          Length = 209838

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     tgtcctaaaacttattatgt 57
              ||||||||||||||||||||
Sbjct: 156403 tgtcctaaaacttattatgt 156384
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>emb|BX901957.4| Zebrafish DNA sequence from clone CH211-150G5 in linkage group 15,
              complete sequence
          Length = 175019

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    caatcaagctgattcctcta 264
              ||||||||||||||||||||
Sbjct: 137202 caatcaagctgattcctcta 137183
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>gb|AC154836.2| Mus musculus BAC clone RP24-574D17 from chromosome 16, complete
             sequence
          Length = 150449

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    ccttgctgtcctaaaacttattat 55
             |||||||| |||||||||||||||
Sbjct: 60257 ccttgctgacctaaaacttattat 60280
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>emb|AL662896.9| Human DNA sequence from clone RP13-218H24 on chromosome X Contains the
             gene for a novel protein, complete sequence
          Length = 86097

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   agattttgggtgctaaacaa 179
             ||||||||||||||||||||
Sbjct: 22615 agattttgggtgctaaacaa 22634
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>emb|AL512655.17| Human DNA sequence from clone RP11-536C2 on chromosome 13, complete
             sequence
          Length = 146002

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   cagcaaaaatcaatcaagct 254
             ||||||||||||||||||||
Sbjct: 78085 cagcaaaaatcaatcaagct 78104
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>emb|AL391883.17| Human DNA sequence from clone RP11-91K11 on chromosome 1 Contains the
             5' end of the gene for a novel protein (LOC255104), the
             gene for a novel protein (FLJ20225), a novel gene and the
             5' end of the gene for a novel protein (KIAA0459),
             complete sequence
          Length = 126371

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   taaacaagtaactgatacag 192
             ||||||||||||||||||||
Sbjct: 12170 taaacaagtaactgatacag 12151
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>emb|AL445188.5| Human DNA sequence from clone RP11-260E14 on chromosome 13, complete
              sequence
          Length = 164061

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    aaaaatcaatcaagctgatt 258
              ||||||||||||||||||||
Sbjct: 112320 aaaaatcaatcaagctgatt 112301
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>gb|AC022203.4|AC022203 Homo sapiens BAC clone RP11-490K15 from 13, complete sequence
          Length = 177088

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   cagcaaaaatcaatcaagct 254
             ||||||||||||||||||||
Sbjct: 13776 cagcaaaaatcaatcaagct 13757
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 142     atctgctacaataacaaaag 161
               ||||||||||||||||||||
Sbjct: 2840215 atctgctacaataacaaaag 2840196
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>gb|AC153821.6| Mus musculus 10 BAC RP23-193A14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 204618

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     tgtcctaaaacttattatgt 57
              ||||||||||||||||||||
Sbjct: 197720 tgtcctaaaacttattatgt 197739
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 142     atctgctacaataacaaaag 161
               ||||||||||||||||||||
Sbjct: 2840159 atctgctacaataacaaaag 2840140
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>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145539

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   atctgctacaataacaaaag 161
             ||||||||||||||||||||
Sbjct: 30232 atctgctacaataacaaaag 30251


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,871,135
Number of Sequences: 3902068
Number of extensions: 2871135
Number of successful extensions: 51005
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50855
Number of HSP's gapped (non-prelim): 145
length of query: 375
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 353
effective length of database: 17,147,199,772
effective search space: 6052961519516
effective search space used: 6052961519516
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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