Clone Information

BLAST Search Result

Clone Name	rbaal39e09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chor...	91	3e-18
2	BRD2_HUMAN (P25440) Bromodomain-containing protein 2 (RING3 prot...	89	2e-17
3	BRD2_CANFA (Q5TJG6) Bromodomain-containing protein 2	89	2e-17
4	YCK2_SCHPO (Q9Y7N0) Hypothetical bromodomain protein C1450.02	87	5e-17
5	BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic ch...	82	1e-15
6	BRD3_MOUSE (Q8K2F0) Bromodomain-containing protein 3 (Bromodomai...	82	2e-15
7	BRD3_HUMAN (Q15059) Bromodomain-containing protein 3 (RING3-like...	82	2e-15
8	BDF1_YEAST (P35817) Protein BDF1	80	4e-15
9	BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot...	79	1e-14
10	YK82_SCHPO (Q9HGP4) Hypothetical bromodomain protein C631.02	77	5e-14
11	CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)	74	5e-13
12	CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)	70	4e-12
13	EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)	69	1e-11
14	GCN5_YEAST (Q03330) Histone acetyltransferase GCN5 (EC 2.3.1.48)	68	2e-11
15	GCN5_ASHGO (Q756G9) Histone acetyltransferase GCN5 (EC 2.3.1.48)	67	4e-11
16	GCN5_YARLI (Q8WZM0) Histone acetyltransferase GCN5 (EC 2.3.1.48)	65	1e-10
17	GCN5_DEBHA (Q6BGW1) Histone acetyltransferase GCN5 (EC 2.3.1.48)	65	2e-10
18	BAZ2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain ...	65	2e-10
19	GCN5_CANGA (Q6FTW5) Histone acetyltransferase GCN5 (EC 2.3.1.48)	64	4e-10
20	BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain ...	64	5e-10
21	TAF1_HUMAN (P21675) Transcription initiation factor TFIID subuni...	64	5e-10
22	BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain ...	64	5e-10
23	BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain ...	63	9e-10
24	GCN5_SCHPO (Q9UUK2) Histone acetyltransferase gcn5 (EC 2.3.1.48)	62	2e-09
25	GCN5_KLULA (Q6CXW4) Histone acetyltransferase GCN5 (EC 2.3.1.48)	61	3e-09
26	GTE6_ARATH (Q9FT54) Transcription factor GTE6 (GENERAL TRANSCRIP...	61	3e-09
27	TIF1A_MOUSE (Q64127) Transcription intermediary factor 1-alpha (...	61	4e-09
28	TAF1L_HUMAN (Q8IZX4) Transcription initiation factor TFIID 210 k...	61	4e-09
29	PB1_HUMAN (Q86U86) Protein polybromo-1 (hPB1) (Polybromo-1D) (BR...	61	4e-09
30	PB1_CHICK (Q90941) Protein polybromo-1	60	5e-09
31	GCNL2_MOUSE (Q9JHD2) General control of amino acid synthesis pro...	60	5e-09
32	TIF1A_HUMAN (O15164) Transcription intermediary factor 1-alpha (...	60	5e-09
33	GCNL2_HUMAN (Q92830) General control of amino acid synthesis pro...	60	6e-09
34	BRD1_SCHPO (Q09948) Bromodomain protein brd1	59	1e-08
35	PCAF_HUMAN (Q92831) Histone acetyltransferase PCAF (EC 2.3.1.48)...	59	1e-08
36	TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (...	58	2e-08
37	TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (...	58	2e-08
38	BAZ1A_HUMAN (Q9NRL2) Bromodomain adjacent to zinc finger domain ...	58	2e-08
39	ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2	58	3e-08
40	ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2	58	3e-08
41	BAZ1A_XENLA (Q8UVR5) Bromodomain adjacent to zinc finger domain ...	58	3e-08
42	ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2	58	3e-08
43	BAZ1B_MOUSE (Q9Z277) Bromodomain adjacent to zinc finger domain ...	57	5e-08
44	BRWD1_MOUSE (Q921C3) Bromodomain and WD-repeat domain-containing...	57	7e-08
45	BAZ1B_HUMAN (Q9UIG0) Bromodomain adjacent to zinc finger domain ...	57	7e-08
46	CBP1_CAEEL (P34545) Protein cbp-1	56	1e-07
47	STH1_YEAST (P32597) Nuclear protein STH1/NPS1 (EC 3.6.1.-) (ATP-...	55	3e-07
48	RSC1_SCHPO (O74964) Chromatin structure remodeling complex prote...	54	3e-07
49	BRWD1_HUMAN (Q9NSI6) Bromodomain and WD-repeat domain-containing...	54	3e-07
50	K1240_HUMAN (Q9ULI0) Protein KIAA1240 (Fragment)	52	1e-06
51	BRD7_CHICK (Q5ZKG2) Bromodomain-containing protein 7	52	2e-06
52	BRPF1_HUMAN (P55201) Peregrin (Bromodomain and PHD finger-contai...	52	2e-06
53	BRD1_HUMAN (O95696) Bromodomain-containing protein 1 (BR140-like...	51	3e-06
54	RSC4_YEAST (Q02206) Chromatin structure remodeling complex prote...	51	4e-06
55	BRD8_MOUSE (Q8R3B7) Bromodomain-containing protein 8	50	8e-06
56	BRD8_HUMAN (Q9H0E9) Bromodomain-containing protein 8 (p120) (Ske...	50	8e-06
57	CECR2_HUMAN (Q9BXF3) Cat eye syndrome critical region protein 2	49	1e-05
58	SMCA2_HUMAN (P51531) Probable global transcription activator SNF...	49	1e-05
59	BRPF3_HUMAN (Q9ULD4) Bromodomain and PHD finger-containing prote...	49	2e-05
60	SMCA4_HUMAN (P51532) Probable global transcription activator SNF...	48	3e-05
61	BRD7_PONPY (Q5R8B0) Bromodomain-containing protein 7	47	4e-05
62	BRD7_MOUSE (O88665) Bromodomain-containing protein 7 (75 kDa bro...	47	4e-05
63	BRD7_HUMAN (Q9NPI1) Bromodomain-containing protein 7 (75 kDa bro...	47	4e-05
64	SNF22_SCHPO (O94421) SNF2-family ATP dependent chromatin remodel...	46	1e-04
65	SPT7_YEAST (P35177) Transcriptional activator SPT7	45	2e-04
66	TBP7_CAEEL (P54816) TAT-binding homolog 7	45	2e-04
67	RSC1_YEAST (P53236) Chromatin structure remodeling complex prote...	45	2e-04
68	TAF1_DROME (P51123) Transcription initiation factor TFIID subuni...	45	3e-04
69	SNF21_SCHPO (Q9UTN6) SNF2-family ATP dependent chromatin remodel...	43	8e-04
70	PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) ...	42	0.002
71	LIN49_CAEEL (Q20318) Protein lin-49 (Abnormal cell lineage prote...	38	0.025
72	RSC2_YEAST (Q06488) Chromatin structure remodeling complex prote...	37	0.042
73	SNF2_YEAST (P22082) Transcription regulatory protein SNF2 (EC 3....	36	0.094
74	BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dep...	35	0.16
75	YBY1_YEAST (P38273) Protein YBR131W	33	1.0
76	STC_DROME (P40798) Protein shuttle craft	32	1.8
77	RPOE_LISMF (Q71WL9) Probable DNA-directed RNA polymerase delta s...	32	1.8
78	RPOE_LISIN (Q927T3) Probable DNA-directed RNA polymerase delta s...	32	1.8
79	LY10_HUMAN (Q13342) Nuclear body protein SP140 (Nuclear autoanti...	32	2.3
80	L_MUMPM (P30929) Large structural protein (Protein L) (Transcrip...	31	3.0
81	KCY_SULAC (O05982) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidin...	31	4.0
82	RPOE_LISMO (Q8Y494) Probable DNA-directed RNA polymerase delta s...	30	5.2
83	GLGB_EMENI (Q9Y8H3) 1,4-alpha-glucan branching enzyme (EC 2.4.1....	30	5.2
84	ST14_HUMAN (Q9Y5Y6) Suppressor of tumorigenicity protein 14 (EC ...	30	6.7
85	GLGB_ASPOR (Q96VA4) 1,4-alpha-glucan branching enzyme (EC 2.4.1....	30	6.7
86	YPCB_ECOLI (P04481) Hypothetical protein in cib 5'region (Fragment)	30	8.8

>FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chorion membrane|
           protein)
          Length = 2038

 Score = 90.9 bits (224), Expect = 3e-18
 Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
 Frame = -3

Query: 662 SNNKAGSMNASKTRVCRNILGKLMD--HPG-GWIFHKLVDPDLFGIPDYFDVIRNPMDLG 492
           + NK    +A K+  C  IL +L    H G  W F+K VD ++ G+ DY D+I+ PMDLG
Sbjct: 471 AKNKEKLSDALKS--CNEILKELFSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLG 528

Query: 491 TVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTS 327
           TVK+K+ N+ Y S  +FAADVRL F+N   YNPP   V  +  +L  +F + + +
Sbjct: 529 TVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYAN 583



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 35/109 (32%), Positives = 57/109 (52%)
 Frame = -3

Query: 614 RNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAA 435
           + ++  +  H   W F + VD     +PDY  +I+ PMD+GT+KK+L N  Y S  +   
Sbjct: 44  KTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQ 103

Query: 434 DVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSYERKWIDRNLKPV 288
           D    F+N   YN PG  V  +A+ L  +F  +  S  ++ ++  L+PV
Sbjct: 104 DFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIESMPKEELE--LEPV 150

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>BRD2_HUMAN (P25440) Bromodomain-containing protein 2 (RING3 protein) (O27.1.1)|
          Length = 801

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
 Frame = -3

Query: 659 NNKAGSMNASKTRVCRNILGKLMDHPGG---WIFHKLVDPDLFGIPDYFDVIRNPMDLGT 489
           ++K G ++  + + C  IL +L+        W F+K VD    G+ DY D+I++PMDL T
Sbjct: 340 SSKKGKLS-EQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLST 398

Query: 488 VKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSYERKWI 309
           VK+K+ N+ Y    +FAADVRL FSN   YNPP   V  +A +L  +F   +     K  
Sbjct: 399 VKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYA----KMP 454

Query: 308 DRNLKPV*LPM 276
           D  L+P  LP+
Sbjct: 455 DEPLEPGPLPV 465



 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 32/107 (29%), Positives = 53/107 (49%)
 Frame = -3

Query: 665 SSNNKAGSMNASKTRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTV 486
           S+  K G +      + + ++  L  H   W F + VD    G+PDY  +I+ PMD+GT+
Sbjct: 67  SNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTI 126

Query: 485 KKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMF 345
           K++L N  Y +  +   D    F+N   YN P   +  +A+ L  +F
Sbjct: 127 KRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173

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>BRD2_CANFA (Q5TJG6) Bromodomain-containing protein 2|
          Length = 803

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
 Frame = -3

Query: 659 NNKAGSMNASKTRVCRNILGKLMDHPGG---WIFHKLVDPDLFGIPDYFDVIRNPMDLGT 489
           ++K G ++  + + C  IL +L+        W F+K VD    G+ DY D+I++PMDL T
Sbjct: 340 SSKKGKLS-EQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLST 398

Query: 488 VKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSYERKWI 309
           VK+K+ N+ Y    +FAADVRL FSN   YNPP   V  +A +L  +F   +     K  
Sbjct: 399 VKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYA----KMP 454

Query: 308 DRNLKPV*LPM 276
           D  L+P  LP+
Sbjct: 455 DEPLEPGPLPV 465



 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 32/107 (29%), Positives = 53/107 (49%)
 Frame = -3

Query: 665 SSNNKAGSMNASKTRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTV 486
           S+  K G +      + + ++  L  H   W F + VD    G+PDY  +I+ PMD+GT+
Sbjct: 67  SNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTI 126

Query: 485 KKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMF 345
           K++L N  Y +  +   D    F+N   YN P   +  +A+ L  +F
Sbjct: 127 KRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIF 173

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>YCK2_SCHPO (Q9Y7N0) Hypothetical bromodomain protein C1450.02|
          Length = 578

 Score = 87.0 bits (214), Expect = 5e-17
 Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
 Frame = -3

Query: 638 NASKTRVCRNILGKLMDHPG---GWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTN 468
           N S+ R C  +L +L         + F++ VDP     PDYFDVI+ PMDL T++ KL  
Sbjct: 253 NNSQMRFCSTVLKELYKRQYESFAFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNK 312

Query: 467 KSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEW 333
             Y + ++F +D+ L F+N  TYNPPG  VH +  QL  +F  +W
Sbjct: 313 NEYSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLENVFKEKW 357



 Score = 67.4 bits (163), Expect = 4e-11
 Identities = 54/184 (29%), Positives = 80/184 (43%), Gaps = 10/184 (5%)
 Frame = -3

Query: 677 ENRPSSNNKAGS-MNASKTRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPM 501
           E  P+     GS M   + + C  I+ +L        F   VDP    IPDY  +++NPM
Sbjct: 72  EPEPTVKKIRGSGMPPPQQKYCLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPM 131

Query: 500 DLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSYE 321
           DLGT++KKLT+  Y    +F  D+ L FSN   YN     V ++ + L  +F       +
Sbjct: 132 DLGTIEKKLTSYEYSVPQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVF-----ERQ 186

Query: 320 RKWIDRNLKPV*LPMKVIKAHVAVNSKP---------VVSRGLAACPNSRVACPHVIDKW 168
            K +    +P   P+K  K   A  + P           S  +AA    + A P V+ + 
Sbjct: 187 LKQLPDAEQPAAAPVKKSKQKSASTAPPRTRRNSSVSSTSASVAASTAPKAASPAVLPEG 246

Query: 167 TPER 156
            P R
Sbjct: 247 KPRR 250

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>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
           chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
 Frame = -3

Query: 668 PSSNNKAGSMNASKT----RVCRNILGKLM--DHPG-GWIFHKLVDPDLFGIPDYFDVIR 510
           P S    G   +SK     + C  IL ++    H    W F+K VD +  G+ DY D+I+
Sbjct: 337 PDSQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIK 396

Query: 509 NPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEW 333
           +PMD+ T+K KL ++ Y    +F ADVRL FSN   YNPP  +V  +A +L  +F + +
Sbjct: 397 HPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 455



 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 36/107 (33%), Positives = 53/107 (49%)
 Frame = -3

Query: 665 SSNNKAGSMNASKTRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTV 486
           S+ NK          + R +L  L  H   W F + VD     +PDY+ +I+ PMD+GT+
Sbjct: 51  SNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTI 110

Query: 485 KKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMF 345
           KK+L N  Y +  +   D    F+N   YN PG  +  +AE L  +F
Sbjct: 111 KKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 157

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>BRD3_MOUSE (Q8K2F0) Bromodomain-containing protein 3 (Bromodomain-containing|
           FSH-like protein FSRG2)
          Length = 726

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 3/159 (1%)
 Frame = -3

Query: 668 PSSNNKAGSMNASKTRVCRNILGKLMDHPGG---WIFHKLVDPDLFGIPDYFDVIRNPMD 498
           P    K G ++    R C +IL +++        W F+K VD +   + DY D+I++PMD
Sbjct: 298 PQHAGKKGKLS-EHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMD 356

Query: 497 LGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSYER 318
           L TVK+K+ ++ Y     FAAD+RL FSN   YNPP  +V  +A +L  +F + +     
Sbjct: 357 LSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFA---- 412

Query: 317 KWIDRNLKPV*LPMKVIKAHVAVNSKPVVSRGLAACPNS 201
           K  D  ++   LP           + P+VS+G  +  +S
Sbjct: 413 KMPDEPMEAPALP---------APTAPIVSKGAESSRSS 442



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
 Frame = -3

Query: 662 SNNKAGSMNASKTRVCRNILGK-LMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTV 486
           SN        ++ +  +N++ K L  H   W F++ VD     +PDY  +I+NPMD+GT+
Sbjct: 26  SNPSKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTI 85

Query: 485 KKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMF 345
           KK+L N  Y S  +   D    F+N   YN P   +  +A+ L  +F
Sbjct: 86  KKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 132

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>BRD3_HUMAN (Q15059) Bromodomain-containing protein 3 (RING3-like protein)|
          Length = 726

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
 Frame = -3

Query: 668 PSSNNKAGSMNASKTRVCRNILGKLMDHPGG---WIFHKLVDPDLFGIPDYFDVIRNPMD 498
           P    K G ++    R C +IL +++        W F+K VD +   + DY D+I++PMD
Sbjct: 299 PQHAGKKGKLS-EHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMD 357

Query: 497 LGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEW 333
           L TVK+K+  + Y     FAADVRL FSN   YNPP  +V  +A +L  +F + +
Sbjct: 358 LSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRF 412



 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
 Frame = -3

Query: 662 SNNKAGSMNASKTRVCRNILGK-LMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTV 486
           SN        ++ +  +N++ K L  H   W F++ VD     +PDY  +I+NPMD+GT+
Sbjct: 27  SNPSKPGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTI 86

Query: 485 KKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMF 345
           KK+L N  Y S  +   D    F+N   YN P   +  +A+ L  +F
Sbjct: 87  KKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIF 133

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>BDF1_YEAST (P35817) Protein BDF1|
          Length = 686

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
 Frame = -3

Query: 623 RVCRNILGKLM--DHPG-GWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLS 453
           + C+++L +LM   H    + F + VDP    +P YFD ++ PMDLGT+ KKL +  Y +
Sbjct: 319 KFCQSVLKELMAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQYQT 378

Query: 452 TDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEW 333
            +DF  DVRL F N  T+NP G  V+ +  +L  +FN +W
Sbjct: 379 MEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKW 418



 Score = 49.7 bits (117), Expect = 8e-06
 Identities = 24/75 (32%), Positives = 39/75 (52%)
 Frame = -3

Query: 569 FHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
           F + VDP    IP YF+ I+ PMDL T+++KL   +Y   +    D  L  +N++ +N P
Sbjct: 173 FLQPVDPVKLDIPFYFNYIKRPMDLSTIERKLNVGAYEVPEQITEDFNLMVNNSIKFNGP 232

Query: 389 GIQVHTVAEQLNIMF 345
              +  +A  +   F
Sbjct: 233 NAGISQMARNIQASF 247

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>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 35/81 (43%), Positives = 51/81 (62%)
 Frame = -3

Query: 575 WIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYN 396
           W F+K VD +  G+ DY D+I++PMD+ T+K KL  + Y    +F ADVRL FSN   YN
Sbjct: 374 WPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYN 433

Query: 395 PPGIQVHTVAEQLNIMFNLEW 333
           PP  +V  +A +L  +F + +
Sbjct: 434 PPDHEVVAMARKLQDVFEMRF 454



 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 36/107 (33%), Positives = 53/107 (49%)
 Frame = -3

Query: 665 SSNNKAGSMNASKTRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTV 486
           S+ NK          + R +L  L  H   W F + VD     +PDY+ +I+ PMD+GT+
Sbjct: 51  SNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTI 110

Query: 485 KKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMF 345
           KK+L N  Y +  +   D    F+N   YN PG  +  +AE L  +F
Sbjct: 111 KKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLF 157

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>YK82_SCHPO (Q9HGP4) Hypothetical bromodomain protein C631.02|
          Length = 727

 Score = 77.0 bits (188), Expect = 5e-14
 Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
 Frame = -3

Query: 638 NASKTRVCRNILGKLM--DHPG-GWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTN 468
           +A++ + C+++L +L+   H    + F+K V+P   G PDYF VI++PMDLGT++ KL +
Sbjct: 390 DAAEMKFCQSVLKELLKKQHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNH 449

Query: 467 KSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTS 327
             Y S   F AD+ L F N   +N  G  VH + ++L  +F   W +
Sbjct: 450 NEYASMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLESIFQKLWAN 496



 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 31/93 (33%), Positives = 45/93 (48%)
 Frame = -3

Query: 569 FHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
           F   VDP    IPDY  +I+NP+DLGT++KK ++  Y S   F  D+ L FSN   YN  
Sbjct: 254 FRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSSGVYSSAQHFIDDMNLMFSNCFLYNGT 313

Query: 389 GIQVHTVAEQLNIMFNLEWTSYERKWIDRNLKP 291
              V  + + L   F  +       ++    +P
Sbjct: 314 ESPVGVMGKNLQATFERQLKQLPSAYVTSYSRP 346

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>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 35/78 (44%), Positives = 47/78 (60%)
 Frame = -3

Query: 569  FHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
            F + VDP L GIPDYFD+++NPMDL T+K+KL    Y     +  DVRL F+NA  YN  
Sbjct: 1112 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVRLMFNNAWLYNRK 1171

Query: 389  GIQVHTVAEQLNIMFNLE 336
              +V+    +L  +F  E
Sbjct: 1172 TSRVYKFCSKLAEVFEQE 1189

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>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 70.5 bits (171), Expect = 4e-12
 Identities = 34/78 (43%), Positives = 46/78 (58%)
 Frame = -3

Query: 569  FHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
            F + VDP L GIPDYFD+++NPMDL T+K+KL    Y     +  DV L F+NA  YN  
Sbjct: 1111 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1170

Query: 389  GIQVHTVAEQLNIMFNLE 336
              +V+    +L  +F  E
Sbjct: 1171 TSRVYKFCSKLAEVFEQE 1188

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>EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)|
          Length = 2414

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 32/78 (41%), Positives = 47/78 (60%)
 Frame = -3

Query: 569  FHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
            F + VDP L GIPDYFD++++PMDL T+K+KL    Y     +  D+ L F+NA  YN  
Sbjct: 1075 FRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQEPWQYVDDIWLMFNNAWLYNRK 1134

Query: 389  GIQVHTVAEQLNIMFNLE 336
              +V+    +L+ +F  E
Sbjct: 1135 TSRVYKYCSKLSEVFEQE 1152

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>GCN5_YEAST (Q03330) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 439

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 34/91 (37%), Positives = 50/91 (54%)
 Frame = -3

Query: 614 RNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAA 435
           +NIL +L +H   W F + V+ +   +PDY+D I+ PMDL T++ KL +  Y   +DF  
Sbjct: 337 QNILTELQNHAAAWPFLQPVNKE--EVPDYYDFIKEPMDLSTMEIKLESNKYQKMEDFIY 394

Query: 434 DVRLTFSNAMTYNPPGIQVHTVAEQLNIMFN 342
           D RL F+N   YN      +  A +L   FN
Sbjct: 395 DARLVFNNCRMYNGENTSYYKYANRLEKFFN 425

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>GCN5_ASHGO (Q756G9) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 452

 Score = 67.4 bits (163), Expect = 4e-11
 Identities = 34/91 (37%), Positives = 49/91 (53%)
 Frame = -3

Query: 614 RNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAA 435
           +N+L +L +H   W F + V+ D   +PDY++ I+ PMDL T++ KL N  Y   +DF  
Sbjct: 350 QNVLTELQNHAAAWPFLQPVNRD--EVPDYYEFIKEPMDLSTMEIKLENNRYEKMEDFIY 407

Query: 434 DVRLTFSNAMTYNPPGIQVHTVAEQLNIMFN 342
           D RL F+N   YN         A +L   FN
Sbjct: 408 DARLIFNNCRAYNGENTSYFKYANRLEKFFN 438

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>GCN5_YARLI (Q8WZM0) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 464

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 29/75 (38%), Positives = 48/75 (64%)
 Frame = -3

Query: 620 VCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDF 441
           V +++L +L +H   W F + V+ D   +PDY++VI+ PMDL T++++L   SY + ++F
Sbjct: 360 VMQHVLSELQNHASAWPFAQAVNRD--EVPDYYEVIKEPMDLSTMEQRLEADSYKTMEEF 417

Query: 440 AADVRLTFSNAMTYN 396
             D RL F+N   YN
Sbjct: 418 VYDARLVFNNCRAYN 432

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>GCN5_DEBHA (Q6BGW1) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 455

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 35/89 (39%), Positives = 47/89 (52%)
 Frame = -3

Query: 608 ILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADV 429
           +L +L +HP  W F   V+ +  G  DY+DVI+ PMDL T++ KL N  Y S D F  D 
Sbjct: 354 LLSELTNHPSAWPFSTPVNKEEVG--DYYDVIKEPMDLSTMELKLENDKYDSFDQFLYDA 411

Query: 428 RLTFSNAMTYNPPGIQVHTVAEQLNIMFN 342
           RL F+N  +YN         A +L    N
Sbjct: 412 RLIFNNCRSYNADSTTYFKNATKLEKFMN 440

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>BAZ2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain 2B (Extracellular|
            matrix protein F22)
          Length = 2130

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 33/97 (34%), Positives = 49/97 (50%)
 Frame = -3

Query: 620  VCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDF 441
            +C  IL +L  H   W F  L+  +L  +P Y  VI+ PMD  T++ KLT+  Y + + F
Sbjct: 2030 ICSMILSELETHEDAWPF--LLPVNLKLVPGYKKVIKKPMDFSTIRDKLTSGQYPNVEAF 2087

Query: 440  AADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWT 330
            + DVRL F N  T+N     +      +   F  +WT
Sbjct: 2088 SLDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWT 2124

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>GCN5_CANGA (Q6FTW5) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 546

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 32/91 (35%), Positives = 49/91 (53%)
 Frame = -3

Query: 614 RNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAA 435
           +NIL +L +H   W F + V+ +   +PDY++ I+ PMDL T++ KL N  Y   ++F  
Sbjct: 444 QNILVELQNHAAAWPFLRPVNKE--EVPDYYEFIKEPMDLSTMELKLENNKYEKMEEFIY 501

Query: 434 DVRLTFSNAMTYNPPGIQVHTVAEQLNIMFN 342
           D RL  +N   YN      +  A +L   FN
Sbjct: 502 DARLVCNNCRLYNGENTSYYKYANRLEKFFN 532

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>BAZ2A_HUMAN (Q9UIF9) Bromodomain adjacent to zinc finger domain 2A (Transcription|
            termination factor I-interacting protein 5)
            (TTF-I-interacting protein 5) (Tip5) (hWALp3)
          Length = 1878

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
 Frame = -3

Query: 668  PSSNNKAGSMNA-SKTRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLG 492
            PS   +    N  S    C  IL ++  H   W F + V+P L  +  Y  +I+NPMD  
Sbjct: 1757 PSKRRRLSMRNHHSDLTFCEIILMEMESHDAAWPFLEPVNPRL--VSGYRRIIKNPMDFS 1814

Query: 491  TVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSY 324
            T++++L    Y S+++FAAD  L F N  T+N    +V      +   F   W  +
Sbjct: 1815 TMRERLLRGGYTSSEEFAADALLVFDNCQTFNEDDSEVGKAGHIMRRFFESRWEEF 1870

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>TAF1_HUMAN (P21675) Transcription initiation factor TFIID subunit 1 (EC|
            2.7.11.1) (Transcription initiation factor TFIID 250 kDa
            subunit) (TAF(II)250) (TAFII-250) (TAFII250)
            (TBP-associated factor 250 kDa) (p250) (Cell cycle gene 1
            protein)
          Length = 1872

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 31/81 (38%), Positives = 46/81 (56%)
 Frame = -3

Query: 599  KLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLT 420
            K+M  P  W FH  V+     +PDY+ VI NPMDL T++K ++   Y S + F  DV L 
Sbjct: 1518 KMMAVPDSWPFHHPVNKKF--VPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLI 1575

Query: 419  FSNAMTYNPPGIQVHTVAEQL 357
             +N++ YN P  Q    A+++
Sbjct: 1576 LANSVKYNGPESQYTKTAQEI 1596



 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 27/108 (25%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
 Frame = -3

Query: 674  NRP--SSNNKAGSMNASKTRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPM 501
            NRP  S + +      + + +  +I+  + D P  + FH  V+  +  + DY+ +I  PM
Sbjct: 1368 NRPHKSIHRRRTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKV--VKDYYKIITRPM 1425

Query: 500  DLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQL 357
            DL T+++ +  + Y S ++F   + L   N+ TYN P   +  +++ +
Sbjct: 1426 DLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSM 1473

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>BAZ2A_MOUSE (Q91YE5) Bromodomain adjacent to zinc finger domain 2A (Transcription|
            termination factor I-interacting protein 5)
            (TTF-I-interacting protein 5) (Tip5)
          Length = 1850

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 32/98 (32%), Positives = 49/98 (50%)
 Frame = -3

Query: 617  CRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFA 438
            C  IL ++  H   W F + V+P L  +  Y  VI+NPMD  T++++L    Y S+++FA
Sbjct: 1747 CEIILMEMESHDAAWPFLEPVNPRL--VSGYRRVIKNPMDFSTMRERLLRGGYTSSEEFA 1804

Query: 437  ADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSY 324
            AD  L F N  T+N    +V      +   F   W  +
Sbjct: 1805 ADALLVFDNCQTFNEDDSEVGKAGHVMRRFFESRWEEF 1842

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>BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain 2B (hWALp4)|
          Length = 1972

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 32/97 (32%), Positives = 50/97 (51%)
 Frame = -3

Query: 620  VCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDF 441
            +C  IL ++  H   W F  L+  +L  +P Y  VI+ PMD  T+++KL++  Y + + F
Sbjct: 1872 LCSMILTEMETHEDAWPF--LLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETF 1929

Query: 440  AADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWT 330
            A DVRL F N  T+N     +      +   F  +WT
Sbjct: 1930 ALDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWT 1966

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>GCN5_SCHPO (Q9UUK2) Histone acetyltransferase gcn5 (EC 2.3.1.48)|
          Length = 454

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 29/92 (31%), Positives = 49/92 (53%)
 Frame = -3

Query: 620 VCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDF 441
           V   +  ++ +HP  W F + V  +   +PDY++VI +PMDL T++ +L N  Y S ++F
Sbjct: 351 VLEMLFTEMQNHPSSWPFMQPVSKE--DVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEF 408

Query: 440 AADVRLTFSNAMTYNPPGIQVHTVAEQLNIMF 345
             D +  F N  +YN      +  A++L   F
Sbjct: 409 IRDAKYIFDNCRSYNDSNTTYYKNADRLEKFF 440

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>GCN5_KLULA (Q6CXW4) Histone acetyltransferase GCN5 (EC 2.3.1.48)|
          Length = 516

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 30/91 (32%), Positives = 48/91 (52%)
 Frame = -3

Query: 614 RNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAA 435
           +N+L +L +H   W F + V+ +   +PDY++ I+ PMDL +++ KL    Y   ++F  
Sbjct: 414 QNLLTELQNHAAAWPFLQPVNKE--EVPDYYEFIKEPMDLSSMEMKLNGNRYEKMENFIY 471

Query: 434 DVRLTFSNAMTYNPPGIQVHTVAEQLNIMFN 342
           D RL F+N   YN         A +L   FN
Sbjct: 472 DARLIFNNCRAYNGENTSYFKYANRLEKFFN 502

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>GTE6_ARATH (Q9FT54) Transcription factor GTE6 (GENERAL TRANSCRIPTION FACTOR|
           GROUP E6)
          Length = 369

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
 Frame = -3

Query: 608 ILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNK---SYLSTDDFA 438
           I  ++  H   W F   V+ +  G+ DYF+VI  PMD  T+K ++  K    Y       
Sbjct: 101 IFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVMQIY 160

Query: 437 ADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSY 324
           AD+RL F NAM YN     V+++A++L   F  +W  +
Sbjct: 161 ADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHF 198

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>TIF1A_MOUSE (Q64127) Transcription intermediary factor 1-alpha (TIF1-alpha)|
            (Tripartite motif protein 24)
          Length = 1051

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
 Frame = -3

Query: 623  RVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNK--SYLST 450
            R C  +L  L  H     F    DP    +PDY+ +I+NPMDL T+KK+L      Y   
Sbjct: 907  RKCERLLLFLYCHEMSLAFQ---DPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYCMYTKP 963

Query: 449  DDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMF 345
            +DF AD RL F N   +N P  +V     +L   F
Sbjct: 964  EDFVADFRLIFQNCAEFNEPDSEVANAGIKLESYF 998

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>TAF1L_HUMAN (Q8IZX4) Transcription initiation factor TFIID 210 kDa subunit|
            (TBP-associated factor 210 kDa) (TAF(II)210)
            (TBP-associated factor 1-like)
          Length = 1826

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 29/81 (35%), Positives = 46/81 (56%)
 Frame = -3

Query: 599  KLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLT 420
            K+M  P  W FH  V+     +PDY+ +I NP+DL T++K ++   Y S + F  DV L 
Sbjct: 1537 KMMAVPDSWPFHHPVNKKF--VPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNLI 1594

Query: 419  FSNAMTYNPPGIQVHTVAEQL 357
             +N++ YN P  Q    A+++
Sbjct: 1595 LANSVKYNGPESQYTKTAQEI 1615



 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 23/88 (26%), Positives = 45/88 (51%)
 Frame = -3

Query: 620  VCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDF 441
            +  +I+  + D P    FH  V+  +  + DY+ +I  PMDL T+++ +    Y S ++F
Sbjct: 1407 ILESIINDMRDLPNTHPFHTPVNAKV--VKDYYKIITRPMDLQTLRENVRKCLYPSREEF 1464

Query: 440  AADVRLTFSNAMTYNPPGIQVHTVAEQL 357
               + L   N+ TYN P   +  +++ +
Sbjct: 1465 REHLELIVKNSATYNGPKHSLTQISQSM 1492

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>PB1_HUMAN (Q86U86) Protein polybromo-1 (hPB1) (Polybromo-1D) (BRG1-associated|
           factor 180) (BAF180)
          Length = 1689

 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 8/168 (4%)
 Frame = -3

Query: 677 ENRPSSNNKAGSMNASKTRVCRNILGKLMD------HPGGWIFHKLVD--PDLFGIPDYF 522
           ++    +N+      S     + IL +L++      +P G +  +L    P     PDY+
Sbjct: 162 DDEDGQDNQGTVTEGSSPAYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYY 221

Query: 521 DVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFN 342
            +I+ P+DL T+ +++ N SY S    A D+ L   NA TYN PG QV   A  +  +F 
Sbjct: 222 AIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFY 281

Query: 341 LEWTSYERKWIDRNLKPV*LPMKVIKAHVAVNSKPVVSRGLAACPNSR 198
           ++    E   + ++   +  P  +  A +   S    S G    P S+
Sbjct: 282 MKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSK 329



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 29/83 (34%), Positives = 42/83 (50%)
 Frame = -3

Query: 623 RVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDD 444
           R CRN  G+L+  P    F+ L  P     PDY+  I+ P+ L  ++ KL N+ Y + D 
Sbjct: 394 RSCRNNQGQLIAEP----FYHL--PSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDH 447

Query: 443 FAADVRLTFSNAMTYNPPGIQVH 375
              D+ L F NA  YN P   ++
Sbjct: 448 LECDLNLMFENAKRYNVPNSAIY 470



 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 24/68 (35%), Positives = 34/68 (50%)
 Frame = -3

Query: 560 LVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQ 381
           +V P     PDY+ +I  PMDL  ++  + N  Y   +    D++L F NA  YN  G Q
Sbjct: 547 MVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQ 606

Query: 380 VHTVAEQL 357
           V+  A  L
Sbjct: 607 VYNDAHIL 614



 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -3

Query: 551 PDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
           P    +PDY+  I+ PMD+  ++  +    Y   D    D  + F+NA TYN P
Sbjct: 688 PSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEP 741



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 18/48 (37%), Positives = 30/48 (62%)
 Frame = -3

Query: 533 PDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
           PDY++V+  P+DL  +++KL  + Y   +   AD +L F+NA +Y  P
Sbjct: 82  PDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKP 129

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>PB1_CHICK (Q90941) Protein polybromo-1|
          Length = 1633

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 35/100 (35%), Positives = 52/100 (52%)
 Frame = -3

Query: 620 VCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDF 441
           V  N  G+L+      +F KL  P     PDY+ +I+ P+DL T+ +++ N +Y S    
Sbjct: 192 VATNPSGRLISE----LFQKL--PSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYKSIHAM 245

Query: 440 AADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSYE 321
           A D+ L   NA TYN PG QV   A  +  +FN++    E
Sbjct: 246 AKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIE 285



 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 30/83 (36%), Positives = 42/83 (50%)
 Frame = -3

Query: 623 RVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDD 444
           R CRN  G+L+  P    F +L  P     PDY+  I+ P+ L  ++ KL N  Y + D 
Sbjct: 392 RSCRNNQGQLISEP----FFQL--PSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQ 445

Query: 443 FAADVRLTFSNAMTYNPPGIQVH 375
             AD+ L F NA  YN P   ++
Sbjct: 446 LEADLNLMFENAKRYNVPNSAIY 468



 Score = 50.4 bits (119), Expect = 5e-06
 Identities = 24/68 (35%), Positives = 35/68 (51%)
 Frame = -3

Query: 560 LVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQ 381
           +V P     PDY+ +I  PMDL  ++  + N  Y+  +    D++L F NA  YN  G Q
Sbjct: 545 MVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNEEGSQ 604

Query: 380 VHTVAEQL 357
           V+  A  L
Sbjct: 605 VYNDAHML 612



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 18/48 (37%), Positives = 29/48 (60%)
 Frame = -3

Query: 533 PDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
           PDY++V+  P+DL  +++KL  + Y   +   AD +L F+NA  Y  P
Sbjct: 83  PDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKP 130



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = -3

Query: 551 PDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
           P    +PDY+  I+ P+D+  ++  +    Y   D    D  + F+NA TYN P
Sbjct: 686 PSRSELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEP 739

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>GCNL2_MOUSE (Q9JHD2) General control of amino acid synthesis protein 5-like 2|
           (EC 2.3.1.48) (Histone acetyltransferase GCN5) (mmGCN5)
          Length = 830

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 30/90 (33%), Positives = 49/90 (54%)
 Frame = -3

Query: 614 RNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAA 435
           +N+L ++  HP  W F + V       PDY++VIR P+DL T+ ++L ++ Y++   F A
Sbjct: 731 KNLLAQIKSHPSAWPFMEPVKKS--EAPDYYEVIRFPIDLKTMTERLRSRYYVTRKLFVA 788

Query: 434 DVRLTFSNAMTYNPPGIQVHTVAEQLNIMF 345
           D++   +N   YNPP  +    A  L   F
Sbjct: 789 DLQRVIANCREYNPPNSEYCRCASALKKFF 818

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>TIF1A_HUMAN (O15164) Transcription intermediary factor 1-alpha (TIF1-alpha)|
            (Tripartite motif protein 24) (RING finger protein 82)
          Length = 1050

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
 Frame = -3

Query: 623  RVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTN--KSYLST 450
            R C  +L  L  H     F    DP    +PDY+ +I+NPMDL T+KK+L      Y   
Sbjct: 906  RKCERLLLFLYCHEMSLAFQ---DPVPLTVPDYYKIIKNPMDLSTIKKRLQEDYSMYSKP 962

Query: 449  DDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMF 345
            +DF AD RL F N   +N P  +V     +L   F
Sbjct: 963  EDFVADFRLIFQNCAEFNEPDSEVANAGIKLENYF 997

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>GCNL2_HUMAN (Q92830) General control of amino acid synthesis protein 5-like 2 (EC|
            2.3.1.48) (Histone acetyltransferase GCN5) (hsGCN5)
            (STAF97)
          Length = 837

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 30/90 (33%), Positives = 49/90 (54%)
 Frame = -3

Query: 614  RNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAA 435
            +N+L ++  HP  W F + V       PDY++VIR P+DL T+ ++L ++ Y++   F A
Sbjct: 738  KNLLAQIKSHPSAWPFMEPVKKS--EAPDYYEVIRFPIDLKTMTERLRSRYYVTRKLFVA 795

Query: 434  DVRLTFSNAMTYNPPGIQVHTVAEQLNIMF 345
            D++   +N   YNPP  +    A  L   F
Sbjct: 796  DLQRVIANCREYNPPDSEYCRCASALEKFF 825

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>BRD1_SCHPO (Q09948) Bromodomain protein brd1|
          Length = 542

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
 Frame = -3

Query: 677 ENRPSSNNKAGSMNASKTRVCRNILGKL---MDHPGGWIFHKLVD-PDLFGIPDYFDVIR 510
           E+  +  +K G+      +V +NIL  L    D  G ++    +D P     PDY+++I+
Sbjct: 128 ESSINEEHKPGTNEIDVPKVIQNILDALHEEKDEQGRFLIDIFIDLPSKRLYPDYYEIIK 187

Query: 509 NPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLN 354
           +PM +  ++K+     Y + + F  D+   F NA TYN PG  V+  AE+L+
Sbjct: 188 SPMTIKMLEKRFKKGEYTTLESFVKDLNQMFINAKTYNAPGSFVYEDAEKLS 239



 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 27/66 (40%), Positives = 36/66 (54%)
 Frame = -3

Query: 572 IFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNP 393
           IF +L     F  PDY+ +I+ P+    ++ K     YLS  DF  D+RL  SNA TYN 
Sbjct: 36  IFEELPSKRYF--PDYYQIIQKPICYKMMRNKAKTGKYLSMGDFYDDIRLMVSNAQTYNM 93

Query: 392 PGIQVH 375
           PG  V+
Sbjct: 94  PGSLVY 99

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>PCAF_HUMAN (Q92831) Histone acetyltransferase PCAF (EC 2.3.1.48)|
           (P300/CBP-associated factor) (P/CAF) (Histone acetylase
           PCAF)
          Length = 832

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 32/90 (35%), Positives = 49/90 (54%)
 Frame = -3

Query: 614 RNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAA 435
           ++IL ++  H   W F + V       P Y++VIR PMDL T+ ++L N+ Y+S   F A
Sbjct: 733 KSILQQVKSHQSAWPFMEPVKRT--EAPGYYEVIRFPMDLKTMSERLKNRYYVSKKLFMA 790

Query: 434 DVRLTFSNAMTYNPPGIQVHTVAEQLNIMF 345
           D++  F+N   YNPP  + +  A  L   F
Sbjct: 791 DLQRVFTNCKEYNPPESEYYKCANILEKFF 820

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>TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (TIF1-gamma)|
            (Tripartite motif protein 33)
          Length = 1142

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
 Frame = -3

Query: 623  RVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNK---SYLS 453
            R C  +L  L  H     F    +P    IP+Y+ +I+ PMDL TVKKKL  K    Y  
Sbjct: 979  RKCERLLLYLYCHELSIEFQ---EPVPVSIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQI 1035

Query: 452  TDDFAADVRLTFSNAMTYNP--PGIQVHTVAEQLNI 351
             DDF ADVRL F N   +N     +QV+   +++N+
Sbjct: 1036 PDDFVADVRLIFKNCERFNEMMKVVQVYADTQEINL 1071

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>TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (TIF1-gamma)|
            (RET-fused gene 7 protein) (Rfg7 protein) (Tripartite
            motif protein 33)
          Length = 1127

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
 Frame = -3

Query: 623  RVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNK---SYLS 453
            R C  +L  L  H     F    +P    IP+Y+ +I+ PMDL TVKKKL  K    Y  
Sbjct: 964  RKCERLLLYLYCHELSIEFQ---EPVPASIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQI 1020

Query: 452  TDDFAADVRLTFSNAMTYNP--PGIQVHTVAEQLNIMFNLE 336
             DDF ADVRL F N   +N     +QV+   +++N+  + E
Sbjct: 1021 PDDFVADVRLIFKNCERFNEMMKVVQVYADTQEINLKADSE 1061

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>BAZ1A_HUMAN (Q9NRL2) Bromodomain adjacent to zinc finger domain protein 1A|
            (ATP-utilizing chromatin assembly and remodeling factor
            1) (hACF1) (ATP-dependent chromatin remodelling protein)
            (Williams syndrome transcription factor-related chromatin
            remodeli
          Length = 1556

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 32/112 (28%), Positives = 52/112 (46%)
 Frame = -3

Query: 671  RPSSNNKAGSMNASKTRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLG 492
            R SS  + G    S       ++ +L+ H   W F KLV      +PDY+D+I+ P+ L 
Sbjct: 1423 RRSSGRQGGVHELS---AFEQLVVELVRHDDSWPFLKLVSK--IQVPDYYDIIKKPIALN 1477

Query: 491  TVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLE 336
             +++K+    Y    +F  D+ L FSN   YNP          +L   F+++
Sbjct: 1478 IIREKVNKCEYKLASEFIDDIELMFSNCFEYNPRNTSEAKAGTRLQAFFHIQ 1529

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>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2|
          Length = 1390

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = -3

Query: 614  RNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAA 435
            RN+  +L       +F K VDPD   +PDY  VI+ PMDL +V  K+    YL+  D+  
Sbjct: 994  RNVTHRLAIDKRFRVFTKPVDPD--EVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLR 1051

Query: 434  DVRLTFSNAMTYNP 393
            D+ L  SNA+ YNP
Sbjct: 1052 DIDLICSNALEYNP 1065

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>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2|
          Length = 1091

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = -3

Query: 614  RNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAA 435
            RN+  +L       +F K VDPD   +PDY  VI+ PMDL +V  K+    YL+  D+  
Sbjct: 825  RNVTHRLAIDKRFRVFTKPVDPD--EVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLR 882

Query: 434  DVRLTFSNAMTYNP 393
            D+ L  SNA+ YNP
Sbjct: 883  DIDLICSNALEYNP 896

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>BAZ1A_XENLA (Q8UVR5) Bromodomain adjacent to zinc finger domain 1A|
           (ATP-utilizing chromatin assembly and remodely factor 1)
           (xACF1) (Fragment)
          Length = 627

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 32/93 (34%), Positives = 47/93 (50%)
 Frame = -3

Query: 674 NRPSSNNKAGSMNASKTRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDL 495
           NR SS    G    S    C  ++ +L+ H   W F +LV  +   +PDYFDVI+ P+ L
Sbjct: 494 NRRSSGRHHGVHELS---ACEQLVVELVRHDDSWPFMRLVSKNQ--VPDYFDVIQRPIAL 548

Query: 494 GTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYN 396
             +++K+    Y    +F  DV L +SN   YN
Sbjct: 549 NLIREKVNKCEYKCASEFIDDVHLMWSNCFEYN 581

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>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2|
          Length = 1040

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = -3

Query: 614 RNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAA 435
           RN+  +L       +F K VDPD   +PDY  VI+ PMDL +V  K+    YL+  D+  
Sbjct: 643 RNVTHRLAIDKRFRVFTKPVDPD--EVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLK 700

Query: 434 DVRLTFSNAMTYNP 393
           D+ L  SNA+ YNP
Sbjct: 701 DIDLICSNALEYNP 714

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>BAZ1B_MOUSE (Q9Z277) Bromodomain adjacent to zinc finger domain protein 1B|
            (Williams-Beuren syndrome chromosome region 9 protein
            homolog) (WBRS9)
          Length = 1479

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 31/86 (36%), Positives = 47/86 (54%)
 Frame = -3

Query: 617  CRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFA 438
            C +IL KL+ +   W F + V  D     DY+DVI +PMD  T++ K +  +Y S  +F 
Sbjct: 1344 CEDILHKLVKYRFSWPFREPVTRD--EAEDYYDVIEHPMDFQTIQNKCSCGNYRSVQEFL 1401

Query: 437  ADVRLTFSNAMTYNPPGIQVHTVAEQ 360
             D++  F+NA  YN  G  V +  E+
Sbjct: 1402 TDMKQVFANAELYNCRGSHVLSCMEK 1427

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>BRWD1_MOUSE (Q921C3) Bromodomain and WD-repeat domain-containing protein 1|
            (WD-repeat protein 9)
          Length = 2304

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
 Frame = -3

Query: 650  AGSMNASKTRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLT 471
            +G + +   R C+ +L  +        F + VD D +  PDY D+I  PMD GTV++ L 
Sbjct: 1313 SGCIESDWRRQCKALLILIFQCEDSEPFRQPVDLDEY--PDYRDIIDTPMDFGTVRETLE 1370

Query: 470  NKSYLSTDDFAADVRLTFSNAMTYNP-PGIQVHTVAEQLNIMF 345
              +Y S  +F  D+RL FSNA  Y P    +++++  +L+ +F
Sbjct: 1371 AGNYDSPVEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALF 1413



 Score = 37.0 bits (84), Expect = 0.055
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = -3

Query: 548  DLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
            DL   P Y  V+  P DL T++ +L N+ Y        +VR    NA T+N P
Sbjct: 1191 DLCTYPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALIWEVRYIEHNARTFNEP 1243

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>BAZ1B_HUMAN (Q9UIG0) Bromodomain adjacent to zinc finger domain protein 1B|
            (Williams-Beuren syndrome chromosome region 9 protein)
            (WBRS9) (Williams syndrome transcription factor) (hWALP2)
          Length = 1483

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 31/80 (38%), Positives = 43/80 (53%)
 Frame = -3

Query: 617  CRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFA 438
            C  IL K++ +   W F + V  D     DY+DVI +PMD  TV+ K +  SY S  +F 
Sbjct: 1348 CEEILHKIVKYRFSWPFREPVTRD--EAEDYYDVITHPMDFQTVQNKCSCGSYRSVQEFL 1405

Query: 437  ADVRLTFSNAMTYNPPGIQV 378
             D++  F+NA  YN  G  V
Sbjct: 1406 TDMKQVFTNAEVYNCRGSHV 1425

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>CBP1_CAEEL (P34545) Protein cbp-1|
          Length = 2056

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 30/75 (40%), Positives = 39/75 (52%)
 Frame = -3

Query: 569  FHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
            F   VD  L  IPDY ++I+ PMDL TV KKL    Y +   F  D+ L   NA  YN  
Sbjct: 889  FRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLMLDNAWLYNRK 948

Query: 389  GIQVHTVAEQLNIMF 345
              +V+    +L+ MF
Sbjct: 949  NSKVYKYGLKLSEMF 963

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>STH1_YEAST (P32597) Nuclear protein STH1/NPS1 (EC 3.6.1.-) (ATP-dependent|
            helicase STH1) (Chromatin structure remodeling complex
            protein STH1) (SNF2 homolog)
          Length = 1359

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 17/132 (12%)
 Frame = -3

Query: 677  ENRPSSNNKAGSMNASKTRVCRNILG------KLMD-----------HPGGWIFHKLVDP 549
            E +P S + A    A KT+     LG      KL++           HP   IF KL  P
Sbjct: 1225 EEKPESKSPAKKTAAKKTKTKSKSLGIFPTVEKLVEEMREQLDEVDSHPRTSIFEKL--P 1282

Query: 548  DLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTV 369
                 PDYF VI  PM +  + K   N +Y + ++    ++  F NA  YN  G  V+  
Sbjct: 1283 SKRDYPDYFKVIEKPMAIDIILKNCKNGTYKTLEEVRQALQTMFENARFYNEEGSWVYVD 1342

Query: 368  AEQLNIMFNLEW 333
            A++LN  F  EW
Sbjct: 1343 ADKLN-EFTDEW 1353

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>RSC1_SCHPO (O74964) Chromatin structure remodeling complex protein rsc1|
           (Remodel the structure of chromatin complex subunit 1)
          Length = 803

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 27/71 (38%), Positives = 40/71 (56%)
 Frame = -3

Query: 569 FHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
           F +L DP +F  P+Y+  I  PM L  ++KKL+   Y + + F  D  L F NA ++N P
Sbjct: 237 FERLPDPRMF--PEYYQAIEQPMALEVIQKKLSKHRYETIEQFVDDFNLMFDNAKSFNDP 294

Query: 389 GIQVHTVAEQL 357
             QV+  A+ L
Sbjct: 295 SSQVYRDADFL 305

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>BRWD1_HUMAN (Q9NSI6) Bromodomain and WD-repeat domain-containing protein 1|
            (WD-repeat protein 9)
          Length = 2320

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = -3

Query: 548  DLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNP-PGIQVHT 372
            DL   PDY D+I  PMD GTV++ L   +Y S  +F  D+RL FSNA  Y P    ++++
Sbjct: 1343 DLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYS 1402

Query: 371  VAEQLNIMF 345
            +  +L+ +F
Sbjct: 1403 MTLRLSALF 1411



 Score = 37.4 bits (85), Expect = 0.042
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = -3

Query: 548  DLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
            DL   P Y  V+  P DL T++ +L N+ Y        +VR    NA T+N P
Sbjct: 1190 DLCTYPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEP 1242

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>K1240_HUMAN (Q9ULI0) Protein KIAA1240 (Fragment)|
          Length = 733

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 31/48 (64%)
 Frame = -3

Query: 536 IPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNP 393
           + DY +VI+ PMDL TV  K+   +YL+  DF  D+ L  SNA+ YNP
Sbjct: 267 VSDYLEVIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNALEYNP 314

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>BRD7_CHICK (Q5ZKG2) Bromodomain-containing protein 7|
          Length = 651

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 24/62 (38%), Positives = 37/62 (59%)
 Frame = -3

Query: 542 FGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAE 363
           F  P Y  +I+NPMD  T+K+K+ N  Y S ++   + +L  +NAMTYN P    +  A+
Sbjct: 163 FIAPGYSMIIKNPMDFSTMKEKIKNNGYQSIEELKDNFKLMCTNAMTYNKPDTIYYKAAK 222

Query: 362 QL 357
           +L
Sbjct: 223 KL 224

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>BRPF1_HUMAN (P55201) Peregrin (Bromodomain and PHD finger-containing protein 1)|
           (BR140 protein)
          Length = 1214

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 30/73 (41%), Positives = 39/73 (53%)
 Frame = -3

Query: 614 RNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAA 435
           R  L +L +   G IF + V   L  +PDY D I+ PMD  T+K+ L    YL+ DDF  
Sbjct: 638 RKTLEQLQEKDTGNIFSEPVP--LSEVPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEE 695

Query: 434 DVRLTFSNAMTYN 396
           D  L  SN + YN
Sbjct: 696 DFNLIVSNCLKYN 708

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>BRD1_HUMAN (O95696) Bromodomain-containing protein 1 (BR140-like protein)|
          Length = 1058

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 28/77 (36%), Positives = 42/77 (54%)
 Frame = -3

Query: 626 TRVCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTD 447
           T + R++L +L D     IF + V   L  +PDY D I++PMD  T++K+L  + Y +  
Sbjct: 568 TVLLRSVLDQLQDKDPARIFAQPVS--LKEVPDYLDHIKHPMDFATMRKRLEAQGYKNLH 625

Query: 446 DFAADVRLTFSNAMTYN 396
           +F  D  L   N M YN
Sbjct: 626 EFEEDFDLIIDNCMKYN 642

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>RSC4_YEAST (Q02206) Chromatin structure remodeling complex protein RSC4|
           (Remodel the structure of chromatin complex subunit 4)
          Length = 625

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 27/76 (35%), Positives = 40/76 (52%)
 Frame = -3

Query: 569 FHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
           F +LVD D   +P+Y++++ +PM L  VK+ L    Y    DF  D+ L F NA  +N P
Sbjct: 213 FMELVDKD--ELPEYYEIVHSPMALSIVKQNLEIGQYSKIYDFIIDMLLVFQNAHIFNDP 270

Query: 389 GIQVHTVAEQLNIMFN 342
              ++  A  L   FN
Sbjct: 271 SALIYKDATTLTNYFN 286

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>BRD8_MOUSE (Q8R3B7) Bromodomain-containing protein 8|
          Length = 951

 Score = 49.7 bits (117), Expect = 8e-06
 Identities = 22/59 (37%), Positives = 34/59 (57%)
 Frame = -3

Query: 533 PDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQL 357
           P Y  +++ PMDL T+KK + N    ST +F  D+ L F NA+ YN     V+ +A ++
Sbjct: 815 PGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEM 873

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>BRD8_HUMAN (Q9H0E9) Bromodomain-containing protein 8 (p120) (Skeletal muscle|
           abundant protein) (Thyroid hormone receptor coactivating
           protein 120kDa) (TrCP120)
          Length = 1235

 Score = 49.7 bits (117), Expect = 8e-06
 Identities = 22/59 (37%), Positives = 34/59 (57%)
 Frame = -3

Query: 533 PDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQL 357
           P Y  +++ PMDL T+KK + N    ST +F  D+ L F NA+ YN     V+ +A ++
Sbjct: 742 PGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEM 800



 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 24/77 (31%), Positives = 39/77 (50%)
 Frame = -3

Query: 533  PDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLN 354
            P Y DV++ PMDL ++K+ L+     +   F  D+ L F NA+ YN     V+ +A ++ 
Sbjct: 1138 PGYKDVVKRPMDLTSLKRNLSKGRIRTMAQFLRDLMLMFQNAVMYNDSDHHVYHMAVEMR 1197

Query: 353  IMFNLEWTSYERKWIDR 303
                LE       W+D+
Sbjct: 1198 REV-LEQIQVLNIWLDK 1213

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>CECR2_HUMAN (Q9BXF3) Cat eye syndrome critical region protein 2|
          Length = 1484

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 24/89 (26%), Positives = 45/89 (50%)
 Frame = -3

Query: 608 ILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADV 429
           +L  +  H   W F + VD      P+Y+ +I+ PMD+ +++KKL    Y + ++F  D+
Sbjct: 446 VLDVVKAHKDSWPFLEPVDESY--APNYYQIIKAPMDISSMEKKLNGGLYCTKEEFVNDM 503

Query: 428 RLTFSNAMTYNPPGIQVHTVAEQLNIMFN 342
           +  F N   YN    +   +++ L   F+
Sbjct: 504 KTMFRNCRKYNGESSEYTKMSDNLERCFH 532

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>SMCA2_HUMAN (P51531) Probable global transcription activator SNF2L2 (EC 3.6.1.-)|
            (ATP-dependent helicase SMARCA2) (SNF2-alpha)
            (SWI/SNF-related matrix associated actin dependent
            regulator of chromatin subfamily A member 2) (hBRM)
          Length = 1586

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 22/64 (34%), Positives = 37/64 (57%)
 Frame = -3

Query: 536  IPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQL 357
            +P+Y+++IR P+D   +K+++ N  Y S  D   DV L   NA T+N  G Q++  +  L
Sbjct: 1432 LPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVL 1491

Query: 356  NIMF 345
              +F
Sbjct: 1492 QSVF 1495

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>BRPF3_HUMAN (Q9ULD4) Bromodomain and PHD finger-containing protein 3|
          Length = 1205

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = -3

Query: 566 HKLVDP-DLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPP 390
           H   +P +L  +PDY + I  PMD  T+++KL +  Y + ++F  D  L  +N M YN  
Sbjct: 612 HIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAK 671

Query: 389 GIQVHTVAEQL 357
               H  A +L
Sbjct: 672 DTIFHRAAVRL 682

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>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC 3.6.1.-)|
            (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1
            protein) (Mitotic growth and transcription activator)
            (Brahma protein homolog 1) (SWI/SNF-related
            matrix-associated actin
          Length = 1647

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 21/64 (32%), Positives = 37/64 (57%)
 Frame = -3

Query: 536  IPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQL 357
            +P+Y+++IR P+D   +K+++ N  Y S +D   DV L   NA T+N  G  ++  +  L
Sbjct: 1494 LPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVL 1553

Query: 356  NIMF 345
              +F
Sbjct: 1554 QSVF 1557

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>BRD7_PONPY (Q5R8B0) Bromodomain-containing protein 7|
          Length = 651

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 22/62 (35%), Positives = 36/62 (58%)
 Frame = -3

Query: 542 FGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAE 363
           F  P Y  +I++PMD  T+K+K+ N  Y S ++   + +L  +NAM YN P    +  A+
Sbjct: 163 FIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAK 222

Query: 362 QL 357
           +L
Sbjct: 223 KL 224

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>BRD7_MOUSE (O88665) Bromodomain-containing protein 7 (75 kDa bromodomain|
           protein)
          Length = 651

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 22/62 (35%), Positives = 36/62 (58%)
 Frame = -3

Query: 542 FGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAE 363
           F  P Y  +I++PMD  T+K+K+ N  Y S ++   + +L  +NAM YN P    +  A+
Sbjct: 163 FIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAK 222

Query: 362 QL 357
           +L
Sbjct: 223 KL 224

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>BRD7_HUMAN (Q9NPI1) Bromodomain-containing protein 7 (75 kDa bromodomain|
           protein) (Protein CELTIX-1)
          Length = 651

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 22/62 (35%), Positives = 36/62 (58%)
 Frame = -3

Query: 542 FGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAE 363
           F  P Y  +I++PMD  T+K+K+ N  Y S ++   + +L  +NAM YN P    +  A+
Sbjct: 163 FIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAK 222

Query: 362 QL 357
           +L
Sbjct: 223 KL 224

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>SNF22_SCHPO (O94421) SNF2-family ATP dependent chromatin remodeling factor snf22|
            (EC 3.6.1.-) (ATP-dependent helicase snf22)
          Length = 1680

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = -3

Query: 533  PDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYN 396
            PDY+ +I+ P+ LG +K+ + N  Y    +  AD  L F+NA TYN
Sbjct: 1554 PDYYIIIKRPIALGKIKRNIKNDRYGDVGELIADFMLMFNNAYTYN 1599

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>SPT7_YEAST (P35177) Transcriptional activator SPT7|
          Length = 1332

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = -3

Query: 533 PDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYN 396
           P+Y  +I+  MDL TV KKL +  Y S  +F  D+ L + N +TYN
Sbjct: 476 PNYHQIIKKSMDLNTVLKKLKSFQYDSKQEFVDDIMLIWKNCLTYN 521

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>TBP7_CAEEL (P54816) TAT-binding homolog 7|
          Length = 1242

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 23/59 (38%), Positives = 34/59 (57%)
 Frame = -3

Query: 569  FHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNP 393
            F + VDPD     DY+++I  P+ +  + +KL N  Y   D F AD+ L  +NA+ YNP
Sbjct: 890  FVEPVDPD--EAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALEYNP 946

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>RSC1_YEAST (P53236) Chromatin structure remodeling complex protein RSC1|
           (Remodel the structure of chromatin complex subunit 1)
          Length = 928

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 23/46 (50%), Positives = 29/46 (63%)
 Frame = -3

Query: 533 PDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYN 396
           PDY+ +IRNP+ L T+KK+L +  Y S  DF  D      NAMTYN
Sbjct: 45  PDYYIIIRNPISLNTLKKRLPH--YTSPQDFVNDFAQIPWNAMTYN 88



 Score = 34.3 bits (77), Expect = 0.36
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = -3

Query: 569 FHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTY 399
           F KL  PD    P Y+ VI +P+ L  ++KK+ ++ Y +   F  D +L  +N   Y
Sbjct: 263 FEKL--PDRNEEPTYYSVITDPICLMDIRKKVKSRKYRNFHTFEEDFQLMLTNFKLY 317

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>TAF1_DROME (P51123) Transcription initiation factor TFIID subunit 1 (EC|
            2.7.11.1) (Transcription initiation factor TFIID 230 kDa
            subunit) (TAFII-230) (TAFII250) (TBP-associated factor
            230 kDa) (p230)
          Length = 2129

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 20/59 (33%), Positives = 35/59 (59%)
 Frame = -3

Query: 536  IPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQ 360
            +PDY+ V+  PMDL T+++ +  + Y S + F  D++    N++ YN P    +T+A Q
Sbjct: 1504 VPDYYRVVTKPMDLQTMREYIRQRRYTSREMFLEDLKQIVDNSLIYNGPQ-SAYTLAAQ 1561



 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 23/63 (36%), Positives = 33/63 (52%)
 Frame = -3

Query: 584  PGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAM 405
            P  W F K V+     + DY+ VI+ PMDL T+ K +    Y S  ++ AD+ L  +N  
Sbjct: 1612 PESWPFLKPVNKKQ--VKDYYTVIKRPMDLETIGKNIEAHRYHSRAEYLADIELIATNCE 1669

Query: 404  TYN 396
             YN
Sbjct: 1670 QYN 1672

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>SNF21_SCHPO (Q9UTN6) SNF2-family ATP dependent chromatin remodeling factor snf21|
            (EC 3.6.1.-) (ATP-dependent helicase snf21)
          Length = 1199

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
 Frame = -3

Query: 623  RVCRNI---LGKLMDHPG---GWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKS 462
            RVC  I   + +L D  G     +F +L    L+  PDY+ +I++P+ L  ++K +    
Sbjct: 1068 RVCLEIYKAVNELEDDNGRPLNKLFLELPSKKLY--PDYYMIIKSPIALDAIRKHINGTF 1125

Query: 461  YLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQL 357
            Y + +   +D+   F+NA TYN  G  V+  A ++
Sbjct: 1126 YKTLEAMKSDLMTMFNNARTYNEEGSFVYEDANKM 1160

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>PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) (Cutaneous|
           T-cell lymphoma associated antigen se14-3) (CTCL tumor
           antigen se14-3) (Zinc finger MYND domain containing
           protein 8)
          Length = 1186

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 25/66 (37%), Positives = 33/66 (50%)
 Frame = -3

Query: 593 MDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFS 414
           M  PG   F K V  +    PDY + I +PMDL T++K    K Y  T+ F AD +    
Sbjct: 165 MKQPGTDAFQKPVPLEQH--PDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILH 222

Query: 413 NAMTYN 396
           N + YN
Sbjct: 223 NCIIYN 228

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>LIN49_CAEEL (Q20318) Protein lin-49 (Abnormal cell lineage protein 49)|
          Length = 1042

 Score = 38.1 bits (87), Expect = 0.025
 Identities = 21/75 (28%), Positives = 38/75 (50%)
 Frame = -3

Query: 620 VCRNILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDF 441
           +C+ ++  L     G +F + V+     +  Y D+I NP+ L  + +K  +  Y +    
Sbjct: 517 LCQEVIEALKTIDAGKVFAEPVE-----LVGYTDIIENPICLKDMSEKAASGKYSTVAAL 571

Query: 440 AADVRLTFSNAMTYN 396
           +ADV+L  SN  T+N
Sbjct: 572 SADVQLMLSNCATFN 586

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>RSC2_YEAST (Q06488) Chromatin structure remodeling complex protein RSC2|
           (Remodel the structure of chromatin complex subunit 2)
          Length = 889

 Score = 37.4 bits (85), Expect = 0.042
 Identities = 19/46 (41%), Positives = 26/46 (56%)
 Frame = -3

Query: 533 PDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYN 396
           PDY+ VI+NP+   T+KK++ +  Y     F  DV     NA TYN
Sbjct: 53  PDYYAVIKNPVSFNTLKKRIPH--YTDAQQFMNDVVQIPWNAKTYN 96

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>SNF2_YEAST (P22082) Transcription regulatory protein SNF2 (EC 3.6.1.-)|
            (ATP-dependent helicase SNF2) (SWI/SNF complex component
            SNF2) (Regulatory protein SWI2) (Regulatory protein GAM1)
            (Transcription factor TYE3)
          Length = 1703

 Score = 36.2 bits (82), Expect = 0.094
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -3

Query: 533  PDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNPPGIQVH 375
            PDY+ +I+ P+    +   +   +Y S  +   D  L FSNA  YN  G  V+
Sbjct: 1586 PDYYMIIKYPVAFDNINTHIETLAYNSLKETLQDFHLIFSNARIYNTEGSVVY 1638

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>BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dependent helicase|
            brm) (Protein brahma)
          Length = 1638

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 18/69 (26%), Positives = 34/69 (49%)
 Frame = -3

Query: 602  GKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRL 423
            G+ +  P    F KL  P    +PDY+++I+ P+D+  + +++ +  Y   ++   D   
Sbjct: 1444 GRTLSEP----FMKL--PSRQRLPDYYEIIKRPVDIKKILQRIEDCKYADLNELEKDFMQ 1497

Query: 422  TFSNAMTYN 396
               NA  YN
Sbjct: 1498 LCQNAQIYN 1506

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>YBY1_YEAST (P38273) Protein YBR131W|
          Length = 704

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 362 VQLLCEPEFREDCTSLHLKMLVSHLLRSHRCLNNSCL 472
           + ++C+P+F + C   +LK L   L +S  CLNN  L
Sbjct: 457 IVIVCDPDFNKICERDYLKDLSFQLCQSMECLNNEIL 493

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>STC_DROME (P40798) Protein shuttle craft|
          Length = 1106

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 7/77 (9%)
 Frame = +2

Query: 446 HRCLNNSCL*VSS*QCPSP----LDCG*HQSNQECQIGLDQPVYGKSNHLGDP*ASPEYF 613
           H+C    C+ +    CP P    L CG H+ +Q C  G   P Y  S          E  
Sbjct: 709 HKCNVECCIDIDH-DCPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVI 767

Query: 614 YRPLSCSHS---CFQPC 655
           Y P+ C      C  PC
Sbjct: 768 YPPVPCGTKKPICKLPC 784



 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
 Frame = +2

Query: 488 QCPSPLDCG*HQSNQECQIGLDQPVYGKSNHLGDP*ASPEYFYRPLSC-SHSCFQPC 655
           +C     CG H+ N EC I +D                P    R LSC  H C QPC
Sbjct: 699 RCTKKRSCGKHKCNVECCIDIDHD-------------CPLPCNRTLSCGKHKCDQPC 742

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>RPOE_LISMF (Q71WL9) Probable DNA-directed RNA polymerase delta subunit (RNAP|
           delta factor)
          Length = 178

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 235 WFLEGWPHVQILESHVHTSSTNGPPKEARPTD*DDKDDEE 116
           W L  W  +  ++  V T +T   PK+ R +D DD +DEE
Sbjct: 76  WGLRAWYPMDAIDEEVQTQTT---PKKKRKSDDDDDEDEE 112

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>RPOE_LISIN (Q927T3) Probable DNA-directed RNA polymerase delta subunit (RNAP|
           delta factor)
          Length = 178

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 235 WFLEGWPHVQILESHVHTSSTNGPPKEARPTD*DDKDDEE 116
           W L  W  +  ++  V T +T   PK+ R +D DD +DEE
Sbjct: 76  WGLRAWYPMDAIDEEVQTQTT---PKKKRKSDDDDDEDEE 112

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>LY10_HUMAN (Q13342) Nuclear body protein SP140 (Nuclear autoantigen Sp-140)|
           (Speckled 140 kDa) (LYSp100 protein)
           (Lymphoid-restricted homolog of Sp100)
          Length = 882

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
 Frame = -3

Query: 536 IPDYFDV------IRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSN 411
           IP Y+ +      ++ PM L  +KK+L    Y   + F  D+RL F N
Sbjct: 782 IPYYYYIREACQGLKEPMWLDKIKKRLNEHGYPQVEGFVQDMRLIFQN 829

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>L_MUMPM (P30929) Large structural protein (Protein L) (Transcriptase)|
           (Replicase) [Includes: RNA-directed RNA polymerase (EC
           2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
           2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2261

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 12/96 (12%)
 Frame = -3

Query: 560 LVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDDFAADVRLTFSNAMTYNP---- 393
           L+ P +  I   +D +R  M L TV +KLT  +     D    V L  SN +T  P    
Sbjct: 89  LIWPRILPILQAYD-LRQSMQLPTVWEKLTQSTVNLISDGLERVVLHISNQLTGKPNLFT 147

Query: 392 --------PGIQVHTVAEQLNIMFNLEWTSYERKWI 309
                       + +  E   I FN EW+   + W+
Sbjct: 148 RSRAGQDVKDYSIPSTRELSQIWFNNEWSGSVKTWL 183

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>KCY_SULAC (O05982) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine|
           monophosphate kinase) (CMP kinase)
          Length = 182

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = -3

Query: 587 HPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKSYLSTDD 444
           H GGW+FH L D  ++        +R P+D+    K++ ++ ++S D+
Sbjct: 82  HIGGWLFHNLSDLSIY--------LRAPLDVRA--KRIASRDHISEDE 119

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>RPOE_LISMO (Q8Y494) Probable DNA-directed RNA polymerase delta subunit (RNAP|
           delta factor)
          Length = 178

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 235 WFLEGWPHVQILESHVHTSSTNGPPKEARPTD*DDKDDEE 116
           W L  W  +  ++  V T +T   PK+ R +D D+ +DEE
Sbjct: 76  WGLRAWYPMDAIDEEVQTQTT---PKKKRKSDDDEDEDEE 112

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>GLGB_EMENI (Q9Y8H3) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme)
          Length = 686

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 624 KGL*KYSGEAHGSPRWLDFP*TG*SRPIWHS 532
           +G   + G   G P WLDFP  G +   W++
Sbjct: 518 EGYLNFEGNEFGHPEWLDFPRAGNNNSFWYA 548

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>ST14_HUMAN (Q9Y5Y6) Suppressor of tumorigenicity protein 14 (EC 3.4.21.-)|
           (Serine protease 14) (Matriptase) (Membrane-type serine
           protease 1) (MT-SP1) (Prostamin) (Serine protease
           TADG-15) (Tumor-associated differentially-expressed gene
           15 protein)
          Length = 855

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +2

Query: 398 CTSLHLKMLVSHLLRSHRCLNNSCL*VSS*QCPSPLDCG*HQSNQECQIGL 550
           C  +++     H   ++RCLN  CL   + +C    DC      ++C  GL
Sbjct: 559 CPKVNVVTCTKH---TYRCLNGLCLSKGNPECDGKEDCSDGSDEKDCDCGL 606

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>GLGB_ASPOR (Q96VA4) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme)
          Length = 689

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 624 KGL*KYSGEAHGSPRWLDFP*TG*SRPIWHS 532
           +G   + G   G P WLDFP  G +   W++
Sbjct: 521 EGYLNFEGNEFGHPEWLDFPRDGNNNSFWYA 551

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>YPCB_ECOLI (P04481) Hypothetical protein in cib 5'region (Fragment)|
          Length = 216

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +3

Query: 486 DSAQVHWIADNIKVIRNAK*VWIN---QFMENPTTWVI 590
           D+ Q+HW   NI+VIR  + + IN   Q    P  WVI
Sbjct: 26  DAVQIHWANGNIQVIRPVRGISINGEAQGGIRPPYWVI 63


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,077,320
Number of Sequences: 219361
Number of extensions: 2252888
Number of successful extensions: 4949
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 4652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4931
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result