| Clone Name | rbaal39d14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ADAM1_RAT (P70505) ADAM 1 precursor (EC 3.4.24.-) (A disintegrin... | 28 | 5.0 | 2 | BCDO2_MOUSE (Q99NF1) Beta,beta-carotene 9',10'-dioxygenase (EC 1... | 28 | 8.6 |
|---|
>ADAM1_RAT (P70505) ADAM 1 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 1) (Fertilin alpha subunit) Length = 789 Score = 28.5 bits (62), Expect = 5.0 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 5/70 (7%) Frame = +3 Query: 6 PXHGLPMHHSVDLLVLYIERAGVSE-SDDHWCC---DRSSACLTNRPW-KP*GTRDGSCT 170 P H MH ++ + +G S S DH+ D ACL +RPW + RD C Sbjct: 392 PKHLCLMHETIS------KTSGFSNCSSDHFLRFLHDHRGACLLDRPWHQSHKRRDAHCG 445 Query: 171 SATMSXSGDC 200 + + S +C Sbjct: 446 NGVVEESEEC 455
>BCDO2_MOUSE (Q99NF1) Beta,beta-carotene 9',10'-dioxygenase (EC 1.14.99.-)| (Beta-carotene dioxygenase 2) (B-diox-II) Length = 532 Score = 27.7 bits (60), Expect = 8.6 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 178 VAEVQLPSRVPYGFHGLFV 122 + ++P ++PYGFHG FV Sbjct: 512 LGRAEVPVQMPYGFHGTFV 530 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,118,315 Number of Sequences: 219361 Number of extensions: 367957 Number of successful extensions: 1091 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1080 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1091 length of database: 80,573,946 effective HSP length: 43 effective length of database: 71,141,423 effective search space used: 1707394152 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)