ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal38o12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATKA_PSEPK (Q88FD7) Potassium-transporting ATPase A chain (EC 3.... 29 6.5
2NET2_HUMAN (O00634) Netrin-2-like protein precursor 29 8.5

>ATKA_PSEPK (Q88FD7) Potassium-transporting ATPase A chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain) (ATP
           phosphohydrolase [potassium-transporting] A chain)
           (Potassium-binding and translocating subunit A)
          Length = 564

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
 Frame = -1

Query: 509 AMVWDIYT--AXDKLEXAVRDSVNALT---AVVNLEVGEIVTTAVEAGFVAL 369
           +++W + T  A +    A+ DS+N LT   A+VN+ VGE++   V AG   +
Sbjct: 336 SVLWAVTTTAASNGSVNAMHDSLNPLTGMVAMVNMMVGEVIFGGVGAGLYGM 387



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>NET2_HUMAN (O00634) Netrin-2-like protein precursor|
          Length = 580

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = -3

Query: 402 YYCCRSWIRST---RHXNCXCGCHGNWRSRRF 316
           +YC R W R+T    H    C C+G+ R  RF
Sbjct: 291 FYCDRPWQRATARESHACLACSCNGHARRCRF 322


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,599,640
Number of Sequences: 219361
Number of extensions: 636808
Number of successful extensions: 1151
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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