| Clone Name | rbaal38o11 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 348 bits (894), Expect = 8e-96 Identities = 169/170 (99%), Positives = 169/170 (99%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTRDD IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST Sbjct: 295 WAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 354 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD Sbjct: 355 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 414 Query: 378 ANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 229 ANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF Sbjct: 415 ANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 275 bits (702), Expect = 1e-73 Identities = 129/170 (75%), Positives = 149/170 (87%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTR+D IGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S Sbjct: 305 WAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESL 364 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 G+E IGKRLVNSR+GP FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGD Sbjct: 365 GVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGD 424 Query: 378 ANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 229 AN DA+ G+FYGKGAQQ LPVPEGCTD A+N+DPTARSDDG+C+Y F Sbjct: 425 ANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 274 bits (700), Expect = 2e-73 Identities = 129/172 (75%), Positives = 149/172 (86%), Gaps = 2/172 (1%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTR+D IGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV Sbjct: 305 WAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEV 364 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGD Sbjct: 365 GVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGD 424 Query: 378 ANQDAMKTGSFYGKGAQQ--GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 229 AN DA+K G+FYG A Q G +PVPEGCTD A NYDPTARSDDGSC+Y F Sbjct: 425 ANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 270 bits (690), Expect = 3e-72 Identities = 126/168 (75%), Positives = 146/168 (86%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTR+D IGVC GIF+TD V E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S Sbjct: 303 WAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSV 362 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 G++N+GK+LVNS+DGP FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGD Sbjct: 363 GVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGD 422 Query: 378 ANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 235 AN+DA+ G+F+GK AQQ +LPV +GCTD AKNYDPTARSDDGSC Y Sbjct: 423 ANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 239 bits (609), Expect = 9e-63 Identities = 111/134 (82%), Positives = 125/134 (93%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTR+D IGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG Sbjct: 292 WAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEI 351 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG Sbjct: 352 GVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQ 411 Query: 378 ANQDAMKTGSFYGK 337 AN DAMKTG+FYGK Sbjct: 412 ANDDAMKTGAFYGK 425
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 237 bits (604), Expect = 3e-62 Identities = 110/133 (82%), Positives = 124/133 (93%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTRDD +GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV T Sbjct: 295 WAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDT 354 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 G+ENIGKRLVNSR+GP FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGD Sbjct: 355 GVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGD 414 Query: 378 ANQDAMKTGSFYG 340 AN DAMKTGSFYG Sbjct: 415 ANSDAMKTGSFYG 427
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 224 bits (571), Expect = 2e-58 Identities = 103/133 (77%), Positives = 122/133 (91%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTR+D IGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+ Sbjct: 305 WAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGV 364 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGD Sbjct: 365 GVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGD 424 Query: 378 ANQDAMKTGSFYG 340 AN DAM TG+FYG Sbjct: 425 ANSDAMNTGTFYG 437
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 223 bits (569), Expect = 4e-58 Identities = 102/132 (77%), Positives = 122/132 (92%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTR+D IGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV T Sbjct: 301 WAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSET 360 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 G+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+ Sbjct: 361 GVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGE 420 Query: 378 ANQDAMKTGSFY 343 AN+DAMKTGSF+ Sbjct: 421 ANEDAMKTGSFF 432
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 223 bits (567), Expect = 6e-58 Identities = 106/131 (80%), Positives = 120/131 (91%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTR+D IGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV T Sbjct: 309 WAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGT 368 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 GIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGD Sbjct: 369 GIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGD 428 Query: 378 ANQDAMKTGSF 346 AN DA+ TG+F Sbjct: 429 ANADAINTGNF 439
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 221 bits (563), Expect = 2e-57 Identities = 105/129 (81%), Positives = 120/129 (93%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTR+D IGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV T Sbjct: 304 WAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGT 363 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 GIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGD Sbjct: 364 GIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGD 423 Query: 378 ANQDAMKTG 352 AN DA+ TG Sbjct: 424 ANADAINTG 432
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 221 bits (562), Expect = 2e-57 Identities = 101/131 (77%), Positives = 120/131 (91%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTR+D IGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV Sbjct: 305 WAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEV 364 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGD Sbjct: 365 GVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGD 424 Query: 378 ANQDAMKTGSF 346 ANQDA+K G+F Sbjct: 425 ANQDAIKRGTF 435
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 217 bits (552), Expect = 3e-56 Identities = 104/132 (78%), Positives = 115/132 (87%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTR+D IGVC GIF+TDNV E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV T Sbjct: 309 WAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGT 368 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 GIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGD Sbjct: 369 GIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGD 428 Query: 378 ANQDAMKTGSFY 343 AN DA+ GSF+ Sbjct: 429 ANADAINNGSFF 440
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 212 bits (540), Expect = 9e-55 Identities = 94/132 (71%), Positives = 120/132 (90%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTRDD +GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+ Sbjct: 307 WAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGV 366 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 G++ GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+ Sbjct: 367 GVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGN 426 Query: 378 ANQDAMKTGSFY 343 AN+DA+K+GSF+ Sbjct: 427 ANEDAIKSGSFF 438
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 204 bits (518), Expect = 3e-52 Identities = 91/132 (68%), Positives = 118/132 (89%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTR+D IGVCKGIF+TD V ++ +V++VD PGQSIDFFGALRARVYDDEVRKW+ Sbjct: 309 WAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGV 368 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379 G++++GK+LVNS++GP TF+QPKMT++KLL Y MLVQEQ+NVKRVQLAD Y+++AALG+ Sbjct: 369 GVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGN 428 Query: 378 ANQDAMKTGSFY 343 AN+DA+K+GSF+ Sbjct: 429 ANEDAIKSGSFF 440
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 172 bits (437), Expect = 8e-43 Identities = 79/108 (73%), Positives = 93/108 (86%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 WAPTR+D IG+C GIF+TD V E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW Sbjct: 302 WAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGV 361 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 415 G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L Sbjct: 362 GVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 146 bits (368), Expect = 8e-35 Identities = 72/118 (61%), Positives = 87/118 (73%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 W PTR+D IGVC GIFQ DNV V +VDTFPGQSIDFFGALRARVYDD VR+W+ T Sbjct: 278 WNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDT 337 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 385 G++ IG++LVN+R V + M + L++YG LV EQ+NVKRVQLAD Y+S A L Sbjct: 338 GVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 114 bits (286), Expect = 2e-25 Identities = 50/112 (44%), Positives = 74/112 (66%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 W P RD+ +G+ GIF D +S V K+VD+FP QSIDFF ALR+R+YD+++R ++ Sbjct: 178 WEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQV 237 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 403 G EN+ R+VNS +GP F++P T+ L+E + +V EQ ++ QL D Y Sbjct: 238 GYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 109 bits (272), Expect = 1e-23 Identities = 49/112 (43%), Positives = 72/112 (64%) Frame = -3 Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559 W P RDD +G+ GIF D +S + ++VDTFP QSIDFF ALR+R+YD ++R ++ Sbjct: 178 WEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKV 237 Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 403 G E I R+VNS + P F++P ++ L+E G++++ EQ V QL D Y Sbjct: 238 GFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 47.0 bits (110), Expect = 6e-05 Identities = 27/60 (45%), Positives = 30/60 (50%) Frame = -3 Query: 654 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 475 +VDTFPGQSIDFFGAL R+GP TFEQP MT+EK Sbjct: 1 LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32
>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 23) (DHHC-23) Length = 409 Score = 30.8 bits (68), Expect = 4.6 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%) Frame = +2 Query: 302 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLSCSWTSMCPYSSSF 478 P G+ K+P +P KE L P AW + C R+ C W + C S+ Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301 Query: 479 STVI 490 I Sbjct: 302 QAFI 305
>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)| Length = 462 Score = 30.4 bits (67), Expect = 6.0 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 571 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 696 P H I ++P+T E+++ L W G DD+++ L G D Sbjct: 5 PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44
>LEPA_HELPY (O25122) GTP-binding protein lepA| Length = 602 Score = 30.4 bits (67), Expect = 6.0 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = -3 Query: 657 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 478 KI+ T P S DF L+A +YD ++G+ LV DG + EQ + + Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232 Query: 477 KLLEYGHMLVQEQDNVKRV 421 ++G + + + +K++ Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 7.9 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +2 Query: 407 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 511 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,365,229 Number of Sequences: 219361 Number of extensions: 2046330 Number of successful extensions: 5978 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 5792 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5975 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7762912789 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)