ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal38o11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ... 348 8e-96
2RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a... 275 1e-73
3RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ... 274 2e-73
4RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a... 270 3e-72
5RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ... 239 9e-63
6RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a... 237 3e-62
7RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a... 224 2e-58
8RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a... 223 4e-58
9RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ... 223 6e-58
10RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a... 221 2e-57
11RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ... 221 2e-57
12RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ... 217 3e-56
13RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a... 212 9e-55
14RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a... 204 3e-52
15RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a... 172 8e-43
16RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a... 146 8e-35
17RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a... 114 2e-25
18RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a... 109 1e-23
19RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase a... 47 6e-05
20ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2... 31 4.6
21YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC... 30 6.0
22LEPA_HELPY (O25122) GTP-binding protein lepA 30 6.0
23GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 pre... 30 7.9

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  348 bits (894), Expect = 8e-96
 Identities = 169/170 (99%), Positives = 169/170 (99%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTRDD IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST
Sbjct: 295 WAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 354

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD
Sbjct: 355 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 414

Query: 378 ANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 229
           ANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 415 ANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464



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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  275 bits (702), Expect = 1e-73
 Identities = 129/170 (75%), Positives = 149/170 (87%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTR+D IGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S 
Sbjct: 305 WAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESL 364

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGD
Sbjct: 365 GVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGD 424

Query: 378 ANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 229
           AN DA+  G+FYGKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 425 ANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474



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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  274 bits (700), Expect = 2e-73
 Identities = 129/172 (75%), Positives = 149/172 (86%), Gaps = 2/172 (1%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTR+D IGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV   
Sbjct: 305 WAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEV 364

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGD
Sbjct: 365 GVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGD 424

Query: 378 ANQDAMKTGSFYGKGAQQ--GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 229
           AN DA+K G+FYG  A Q  G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 425 ANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476



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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  270 bits (690), Expect = 3e-72
 Identities = 126/168 (75%), Positives = 146/168 (86%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTR+D IGVC GIF+TD V  E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S 
Sbjct: 303 WAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSV 362

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGD
Sbjct: 363 GVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGD 422

Query: 378 ANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 235
           AN+DA+  G+F+GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 423 ANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470



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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  239 bits (609), Expect = 9e-63
 Identities = 111/134 (82%), Positives = 125/134 (93%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTR+D IGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG  
Sbjct: 292 WAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEI 351

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG 
Sbjct: 352 GVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQ 411

Query: 378 ANQDAMKTGSFYGK 337
           AN DAMKTG+FYGK
Sbjct: 412 ANDDAMKTGAFYGK 425



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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  237 bits (604), Expect = 3e-62
 Identities = 110/133 (82%), Positives = 124/133 (93%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTRDD +GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV  T
Sbjct: 295 WAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDT 354

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           G+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGD
Sbjct: 355 GVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGD 414

Query: 378 ANQDAMKTGSFYG 340
           AN DAMKTGSFYG
Sbjct: 415 ANSDAMKTGSFYG 427



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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  224 bits (571), Expect = 2e-58
 Identities = 103/133 (77%), Positives = 122/133 (91%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTR+D IGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+   
Sbjct: 305 WAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGV 364

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGD
Sbjct: 365 GVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGD 424

Query: 378 ANQDAMKTGSFYG 340
           AN DAM TG+FYG
Sbjct: 425 ANSDAMNTGTFYG 437



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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  223 bits (569), Expect = 4e-58
 Identities = 102/132 (77%), Positives = 122/132 (92%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTR+D IGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV  T
Sbjct: 301 WAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSET 360

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           G+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+
Sbjct: 361 GVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGE 420

Query: 378 ANQDAMKTGSFY 343
           AN+DAMKTGSF+
Sbjct: 421 ANEDAMKTGSFF 432



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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  223 bits (567), Expect = 6e-58
 Identities = 106/131 (80%), Positives = 120/131 (91%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTR+D IGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV  T
Sbjct: 309 WAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGT 368

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           GIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGD
Sbjct: 369 GIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGD 428

Query: 378 ANQDAMKTGSF 346
           AN DA+ TG+F
Sbjct: 429 ANADAINTGNF 439



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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  221 bits (563), Expect = 2e-57
 Identities = 105/129 (81%), Positives = 120/129 (93%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTR+D IGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV  T
Sbjct: 304 WAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGT 363

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           GIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGD
Sbjct: 364 GIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGD 423

Query: 378 ANQDAMKTG 352
           AN DA+ TG
Sbjct: 424 ANADAINTG 432



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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  221 bits (562), Expect = 2e-57
 Identities = 101/131 (77%), Positives = 120/131 (91%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTR+D IGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV   
Sbjct: 305 WAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEV 364

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGD
Sbjct: 365 GVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGD 424

Query: 378 ANQDAMKTGSF 346
           ANQDA+K G+F
Sbjct: 425 ANQDAIKRGTF 435



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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  217 bits (552), Expect = 3e-56
 Identities = 104/132 (78%), Positives = 115/132 (87%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTR+D IGVC GIF+TDNV  E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV  T
Sbjct: 309 WAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGT 368

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           GIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGD
Sbjct: 369 GIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGD 428

Query: 378 ANQDAMKTGSFY 343
           AN DA+  GSF+
Sbjct: 429 ANADAINNGSFF 440



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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  212 bits (540), Expect = 9e-55
 Identities = 94/132 (71%), Positives = 120/132 (90%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTRDD +GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+   
Sbjct: 307 WAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGV 366

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           G++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+
Sbjct: 367 GVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGN 426

Query: 378 ANQDAMKTGSFY 343
           AN+DA+K+GSF+
Sbjct: 427 ANEDAIKSGSFF 438



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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  204 bits (518), Expect = 3e-52
 Identities = 91/132 (68%), Positives = 118/132 (89%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTR+D IGVCKGIF+TD V ++ +V++VD  PGQSIDFFGALRARVYDDEVRKW+   
Sbjct: 309 WAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGV 368

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGD 379
           G++++GK+LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+
Sbjct: 369 GVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGN 428

Query: 378 ANQDAMKTGSFY 343
           AN+DA+K+GSF+
Sbjct: 429 ANEDAIKSGSFF 440



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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  172 bits (437), Expect = 8e-43
 Identities = 79/108 (73%), Positives = 93/108 (86%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           WAPTR+D IG+C GIF+TD V  E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW    
Sbjct: 302 WAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGV 361

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 415
           G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 362 GVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409



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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  146 bits (368), Expect = 8e-35
 Identities = 72/118 (61%), Positives = 87/118 (73%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           W PTR+D IGVC GIFQ DNV    V  +VDTFPGQSIDFFGALRARVYDD VR+W+  T
Sbjct: 278 WNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDT 337

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 385
           G++ IG++LVN+R   V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 338 GVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394



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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  114 bits (286), Expect = 2e-25
 Identities = 50/112 (44%), Positives = 74/112 (66%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           W P RD+ +G+  GIF  D +S   V K+VD+FP QSIDFF ALR+R+YD+++R ++   
Sbjct: 178 WEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQV 237

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 403
           G EN+  R+VNS +GP  F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 238 GYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289



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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  109 bits (272), Expect = 1e-23
 Identities = 49/112 (43%), Positives = 72/112 (64%)
 Frame = -3

Query: 738 WAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGST 559
           W P RDD +G+  GIF  D +S   + ++VDTFP QSIDFF ALR+R+YD ++R ++   
Sbjct: 178 WEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKV 237

Query: 558 GIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 403
           G E I  R+VNS + P  F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 238 GFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289



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>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 6e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -3

Query: 654 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 475
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32



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>ZDH23_HUMAN (Q8IYP9) Probable palmitoyltransferase ZDHHC23 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 23) (DHHC-23)
          Length = 409

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
 Frame = +2

Query: 302 PSGTGKVPCCAPLP*KEPVFIASWLASPRAAWLM*VSASCT-RLTLSCSWTSMCPYSSSF 478
           P G+ K+P  +P   KE       L  P  AW   +   C  R+   C W + C   S+ 
Sbjct: 242 PKGSSKMPAGSPTKAKEDWCAKCQLVRPARAWRCRICGICVRRMDHHCVWINSCVGESNH 301

Query: 479 STVI 490
              I
Sbjct: 302 QAFI 305



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>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 571 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 696
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44



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>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = -3

Query: 657 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 478
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 477 KLLEYGHMLVQEQDNVKRV 421
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251



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>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 407 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 511
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,365,229
Number of Sequences: 219361
Number of extensions: 2046330
Number of successful extensions: 5978
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5975
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7762912789
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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