ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal38o07 |
|---|---|
| Clone Library Name | barley_pub |
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/34 (97%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWAFATNFVPGK Sbjct: 233 IVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/34 (97%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWAFATNFVPGK Sbjct: 233 IVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/34 (97%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWAFATNFVPGK Sbjct: 233 IVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/34 (97%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWAFATNFVPGK Sbjct: 231 IVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/34 (97%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWAFATNFVPGK Sbjct: 231 IVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/34 (97%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWAFATNFVPGK Sbjct: 234 IVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/34 (97%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWAFATNFVPGK Sbjct: 232 IVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/34 (97%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWAFATNFVPGK Sbjct: 232 IVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/34 (97%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWAFATNFVPGK Sbjct: 232 IVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 73.2 bits (178), Expect = 2e-13 Identities = 33/34 (97%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWAFATNFVPGK Sbjct: 91 IVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 124
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 72.4 bits (176), Expect = 3e-13 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADH+ADPV NNAWAFATNFVPGK Sbjct: 234 IVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 72.4 bits (176), Expect = 3e-13 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADH+ADPV NNAWAFATNFVPGK Sbjct: 234 IVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 72.4 bits (176), Expect = 3e-13 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENLADHLADPV NNAWAFATNFVPGK Sbjct: 234 IVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 72.4 bits (176), Expect = 3e-13 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENLADHLADPV NNAWAFATNFVPGK Sbjct: 234 IVTGKGPIENLADHLADPVNNNAWAFATNFVPGK 267
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 72.0 bits (175), Expect = 4e-13 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWA+ATNFVPGK Sbjct: 222 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 72.0 bits (175), Expect = 4e-13 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWA+ATNFVPGK Sbjct: 173 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 72.0 bits (175), Expect = 4e-13 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENLADH+ADPV NNAWAFATNFVPGK Sbjct: 231 IVTGKGPIENLADHIADPVANNAWAFATNFVPGK 264
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 72.0 bits (175), Expect = 4e-13 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWA+ATNFVPGK Sbjct: 234 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 72.0 bits (175), Expect = 4e-13 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWA+ATNFVPGK Sbjct: 234 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 72.0 bits (175), Expect = 4e-13 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWA+ATNFVPGK Sbjct: 232 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 72.0 bits (175), Expect = 4e-13 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWA+ATNFVPGK Sbjct: 232 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 72.0 bits (175), Expect = 4e-13 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWA+ATNFVPGK Sbjct: 232 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 72.0 bits (175), Expect = 4e-13 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWA+ATNFVPGK Sbjct: 228 IVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 71.2 bits (173), Expect = 7e-13 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENLADHLADPV NNAWA+ATNFVPGK Sbjct: 241 IVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 274
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 71.2 bits (173), Expect = 7e-13 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADH+ADPV NNAWA+ATNFVPGK Sbjct: 232 IVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 71.2 bits (173), Expect = 7e-13 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENLADHLADPV NNAWA+ATNFVPGK Sbjct: 245 IVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 71.2 bits (173), Expect = 7e-13 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENLADHLADPV NNAWA+ATNFVPGK Sbjct: 245 IVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 70.9 bits (172), Expect = 9e-13 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAW++ATNFVPGK Sbjct: 195 IVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 228
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 70.9 bits (172), Expect = 9e-13 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAW++ATNFVPGK Sbjct: 83 IVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 116
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 70.9 bits (172), Expect = 9e-13 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAW++ATNFVPGK Sbjct: 236 IVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 70.9 bits (172), Expect = 9e-13 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAW++ATNFVPGK Sbjct: 233 IVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 70.9 bits (172), Expect = 9e-13 Identities = 32/34 (94%), Positives = 32/34 (94%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAW FATNFVPGK Sbjct: 234 IVTGKGPLENLADHLADPVNNNAWNFATNFVPGK 267
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 70.9 bits (172), Expect = 9e-13 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAW++ATNFVPGK Sbjct: 234 IVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 70.9 bits (172), Expect = 9e-13 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAW++ATNFVPGK Sbjct: 234 IVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 70.9 bits (172), Expect = 9e-13 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAW++ATNFVPGK Sbjct: 234 IVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 70.5 bits (171), Expect = 1e-12 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLA+PV NNAWA+ATNFVPGK Sbjct: 212 IVTGKGPLENLADHLAEPVNNNAWAYATNFVPGK 245
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 70.1 bits (170), Expect = 2e-12 Identities = 30/34 (88%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 +VTGKGPLENLADHLADPV NNAW++ATNFVPGK Sbjct: 233 LVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 69.7 bits (169), Expect = 2e-12 Identities = 29/34 (85%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENL+DH+ADPV NNAWA+ATNFVPGK Sbjct: 204 IVTGKGPIENLSDHIADPVANNAWAYATNFVPGK 237
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 69.7 bits (169), Expect = 2e-12 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENLADHL DPV NNAWA+ATNFVPGK Sbjct: 231 IVTGKGPIENLADHLTDPVNNNAWAYATNFVPGK 264
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 69.7 bits (169), Expect = 2e-12 Identities = 30/34 (88%), Positives = 33/34 (97%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHL+DPV NNAW++ATNFVPGK Sbjct: 235 IVTGKGPLENLADHLSDPVNNNAWSYATNFVPGK 268
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 69.3 bits (168), Expect = 3e-12 Identities = 31/34 (91%), Positives = 32/34 (94%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLA PV NNAWA+ATNFVPGK Sbjct: 230 IVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 69.3 bits (168), Expect = 3e-12 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENL DHLADPV NNAWA+ATNFVPGK Sbjct: 233 IVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 69.3 bits (168), Expect = 3e-12 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPL+NL DHLADPV NNAWA+ATNFVPGK Sbjct: 234 IVTGKGPLDNLVDHLADPVNNNAWAYATNFVPGK 267
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 69.3 bits (168), Expect = 3e-12 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENL DH+ADPV NNAWAFATNFVPGK Sbjct: 232 IVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 69.3 bits (168), Expect = 3e-12 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENL DHLADPV NNAWA+ATNFVPGK Sbjct: 232 IVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 265
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 69.3 bits (168), Expect = 3e-12 Identities = 30/33 (90%), Positives = 32/33 (96%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPG 109 IVTGKGPLENLADH+ADPV NNAWA+ATNFVPG Sbjct: 229 IVTGKGPLENLADHIADPVNNNAWAYATNFVPG 261
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 69.3 bits (168), Expect = 3e-12 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENL DHLADPV NNAWA+ATNFVPGK Sbjct: 117 IVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 150
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 68.2 bits (165), Expect = 6e-12 Identities = 29/34 (85%), Positives = 32/34 (94%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 230 IVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 68.2 bits (165), Expect = 6e-12 Identities = 29/34 (85%), Positives = 32/34 (94%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 232 IVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 67.4 bits (163), Expect = 1e-11 Identities = 28/34 (82%), Positives = 32/34 (94%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENL+DH+ DPV NNAWA+ATNFVPGK Sbjct: 232 IVTGKGPIENLSDHINDPVANNAWAYATNFVPGK 265
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 67.0 bits (162), Expect = 1e-11 Identities = 28/34 (82%), Positives = 31/34 (91%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP+ENL+DHLADP NNAWA+ATNF PGK Sbjct: 232 IVTGKGPIENLSDHLADPAVNNAWAYATNFTPGK 265
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 66.6 bits (161), Expect = 2e-11 Identities = 28/34 (82%), Positives = 32/34 (94%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGP++NL DH+ADPV NNAWAFATNFVPG+ Sbjct: 232 IVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 66.2 bits (160), Expect = 2e-11 Identities = 29/34 (85%), Positives = 31/34 (91%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLE+LADH+ADPV NNAW ATNFVPGK Sbjct: 233 IVTGKGPLEDLADHIADPVNNNAWLIATNFVPGK 266
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 66.2 bits (160), Expect = 2e-11 Identities = 29/34 (85%), Positives = 31/34 (91%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHL DPV NNAW++ATNFVP K Sbjct: 234 IVTGKGPLENLADHLVDPVNNNAWSYATNFVPRK 267
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 65.5 bits (158), Expect = 4e-11 Identities = 29/34 (85%), Positives = 30/34 (88%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPGK 106 IVTGKGPLENLADHLADPV NNAWA+AT PGK Sbjct: 223 IVTGKGPLENLADHLADPVNNNAWAYATKLCPGK 256
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 61.6 bits (148), Expect = 5e-10 Identities = 27/33 (81%), Positives = 27/33 (81%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPG 109 IVTGKGPLENL DHL DPV NNAW FAT F PG Sbjct: 235 IVTGKGPLENLFDHLDDPVANNAWVFATKFAPG 267
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 60.5 bits (145), Expect = 1e-09 Identities = 26/33 (78%), Positives = 28/33 (84%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPG 109 IVTGKGPLENL DHL +PV NNAW +AT FVPG Sbjct: 232 IVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 58.2 bits (139), Expect = 6e-09 Identities = 26/33 (78%), Positives = 27/33 (81%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPG 109 IVTGKGPLENL DHLADPV NNAWA+A PG Sbjct: 235 IVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 54.3 bits (129), Expect = 9e-08 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVP 112 IVTGKGP+ENL DHLA+P NNA+A+AT F P Sbjct: 241 IVTGKGPIENLTDHLANPAENNAFAYATKFTP 272
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 53.9 bits (128), Expect = 1e-07 Identities = 24/32 (75%), Positives = 27/32 (84%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVP 112 IVTGKGP++NLADHLADP NNA+A AT F P Sbjct: 223 IVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 53.1 bits (126), Expect = 2e-07 Identities = 23/32 (71%), Positives = 27/32 (84%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVP 112 IVTGKGP++NL DHLA+P NNA+AFAT F P Sbjct: 220 IVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 52.8 bits (125), Expect = 2e-07 Identities = 23/33 (69%), Positives = 26/33 (78%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPG 109 IVTGKGP++NL DHLADP N A+A AT F PG Sbjct: 220 IVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 40.8 bits (94), Expect = 0.001 Identities = 21/33 (63%), Positives = 23/33 (69%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNAWAFATNFVPG 109 IV+ K LENLADHL V NNA + TNFVPG Sbjct: 235 IVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 38.5 bits (88), Expect = 0.005 Identities = 16/22 (72%), Positives = 18/22 (81%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNN 142 +VTG GP +NL DHLADPV NN Sbjct: 244 LVTGVGPYQNLLDHLADPVNNN 265
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 37.0 bits (84), Expect = 0.014 Identities = 15/21 (71%), Positives = 18/21 (85%) Frame = -1 Query: 204 VTGKGPLENLADHLADPVXNN 142 VTG+GP+ENLA HL+DP NN Sbjct: 245 VTGEGPVENLAKHLSDPFGNN 265
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 34.3 bits (77), Expect = 0.091 Identities = 15/19 (78%), Positives = 15/19 (78%) Frame = -1 Query: 198 GKGPLENLADHLADPVXNN 142 G GPLENLA HLADP NN Sbjct: 215 GTGPLENLATHLADPWHNN 233
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 33.9 bits (76), Expect = 0.12 Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNNA-WAFATNFVP 112 IVTG+GP+EN HL DP +N A T F P Sbjct: 89 IVTGEGPVENWLYHLQDPSAHNGLTALVTQFAP 121
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 33.5 bits (75), Expect = 0.16 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = -1 Query: 204 VTGKGPLENLADHLADPVXN 145 VTGKGP ENL HL+DP N Sbjct: 225 VTGKGPFENLLQHLSDPWHN 244
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 30.4 bits (67), Expect = 1.3 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -1 Query: 201 TGKGPLENLADHLADPV 151 TGKGPL N A HL+DP+ Sbjct: 263 TGKGPLNNWATHLSDPL 279
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 30.4 bits (67), Expect = 1.3 Identities = 12/17 (70%), Positives = 14/17 (82%) Frame = -1 Query: 201 TGKGPLENLADHLADPV 151 TGKGPL N A HL+DP+ Sbjct: 260 TGKGPLNNWATHLSDPL 276
>CRCB2_NOCFA (Q5YR85) Protein crcB homolog 2| Length = 140 Score = 29.6 bits (65), Expect = 2.3 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 98 VAYLPGTKLVAKAHALLXTGSARWS 172 + YL GT L A A +L TG+ARW+ Sbjct: 110 LGYLAGTVLAALAGVVLGTGAARWA 134
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 29.6 bits (65), Expect = 2.3 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = -1 Query: 207 IVTGKGPLENLADHLADP 154 I TG GP++NL HLADP Sbjct: 241 IYTGTGPIDNLFAHLADP 258
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 29.6 bits (65), Expect = 2.3 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = -1 Query: 207 IVTGKGPLENLADHLADP 154 I TG GP++NL HLADP Sbjct: 241 IYTGTGPIDNLFAHLADP 258
>HOLB_BUCAI (P57435) DNA polymerase III delta' subunit (EC 2.7.7.7)| Length = 326 Score = 29.6 bits (65), Expect = 2.3 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Frame = +1 Query: 4 FTSWLYKRNQLHTSSRTYVHC--RFLDTSGDNTRSLLA 111 F S+ YK L TS RT++HC R + SG N LL+ Sbjct: 276 FFSYNYKNTILDTSIRTWLHCKYRLSNISGINCELLLS 313
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 28.9 bits (63), Expect = 3.8 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNN 142 + TG+ PL NL+ HLA+P+ N Sbjct: 333 LATGESPLANLSAHLANPIGAN 354
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 28.9 bits (63), Expect = 3.8 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -1 Query: 207 IVTGKGPLENLADHLADPVXNN 142 + TG+ PL NLA H A+PV N Sbjct: 304 LATGESPLANLAAHFANPVGAN 325 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,971,462 Number of Sequences: 219361 Number of extensions: 373131 Number of successful extensions: 907 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 899 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 907 length of database: 80,573,946 effective HSP length: 44 effective length of database: 70,922,062 effective search space used: 1702129488 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
