>VATC_ARATH (Q9SDS7) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C|
           subunit) (Vacuolar proton pump C subunit)
          Length = 375

 Score =  105 bits (261), Expect = 8e-23
 Identities = 48/70 (68%), Positives = 59/70 (84%)
 Frame = -1

Query: 486 ESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSSYWRSEDDVGMAAGLGGETE 307
           ESI+RYGLP  FL+ VL+P+ KSEKKVR+ILE LC +TNS YW+SE+D G  AGL G++E
Sbjct: 304 ESIMRYGLPPAFLACVLSPAVKSEKKVRSILERLCDSTNSLYWKSEEDAGAMAGLAGDSE 363

Query: 306 SHPYVSFTIN 277
           +HPYVSFTIN
Sbjct: 364 THPYVSFTIN 373

>VATC_HORVU (Q9SCB9) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C|
           subunit) (Vacuolar proton pump C subunit)
          Length = 354

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 37/38 (97%), Positives = 37/38 (97%)
 Frame = -3

Query: 466 SACTVPVCCPSTIYKEREKSKEHLGRAMRQYQQQLLEI 353
           SACTVPVCCPSTIYKEREKSKEHLGRAMRQY QQLLEI
Sbjct: 318 SACTVPVCCPSTIYKEREKSKEHLGRAMRQY-QQLLEI 354

>VATC_MANSE (Q9U5N1) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C|
           subunit) (Vacuolar proton pump C subunit)
          Length = 385

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
 Frame = -1

Query: 486 ESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSS---YWRSEDDVGMAAGLG- 319
           ES+LRYGLP  F + +L PS +S +++R+ L  L  + + S   +  ++ D    AGLG 
Sbjct: 304 ESVLRYGLPVNFQAALLVPSRRSARRLRDTLHALYAHLDHSAHHHANAQQDSVELAGLGF 363

Query: 318 GETESHPYVSFTIN 277
           G++E +PYV + IN
Sbjct: 364 GQSEYYPYVFYKIN 377

>VATC_DROME (Q9V7N5) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C|
           subunit) (Vacuolar proton pump C subunit)
          Length = 714

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
 Frame = -1

Query: 486 ESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSS----YWRSEDDVGMAAGLG 319
           ES+LRYGLP  F ++++ P+ KS K++R++L  L G+ + +       S D+V +  GLG
Sbjct: 632 ESVLRYGLPVNFQAILIEPNKKSVKRLRDVLNQLYGHLDGASAGGAVSSADNVDI-PGLG 690

Query: 318 -GETESHPYVSFTIN 277
            G++E  PYV + +N
Sbjct: 691 FGQSEYFPYVFYKVN 705

>VATC_ASCSS (Q9NDR5) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C|
           subunit) (Vacuolar proton pump C subunit)
          Length = 384

 Score = 48.9 bits (115), Expect = 7e-06
 Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = -1

Query: 486 ESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSSYWRSEDDVGMAAGLG-GET 310
           ES+LRYGLP  F +VVL P  K+ K++R++L  L    +S+   + D      GL  G  
Sbjct: 306 ESVLRYGLPVNFQAVVLDPPKKNRKRLRDVLNNLYCKLDSTGLTNVDAEDSVPGLSLGMQ 365

Query: 309 ESHPYVSFTI 280
           E +PYV + +
Sbjct: 366 EYYPYVFYKV 375

>VATC_MOUSE (Q9Z1G3) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C|
           subunit) (Vacuolar proton pump C subunit)
          Length = 381

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = -1

Query: 486 ESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSSYWRSEDDVGMAAGLG-GET 310
           ES+LRYGLP  F +++L P+ KS KK+R +L  L  + +SS     D      GL   + 
Sbjct: 304 ESVLRYGLPVNFQAMLLQPNKKSVKKLREVLHELYKHLDSSAAAIIDAPMDIPGLNLSQQ 363

Query: 309 ESHPYVSFTIN 277
           E +PYV + I+
Sbjct: 364 EYYPYVYYKID 374

>VATC_HUMAN (P21283) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C|
           subunit) (Vacuolar proton pump C subunit)
          Length = 381

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = -1

Query: 486 ESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSSYWRSEDDVGMAAGLG-GET 310
           ES+LRYGLP  F +++L P+ K+ KK+R +L  L  + +SS     D      GL   + 
Sbjct: 304 ESVLRYGLPVNFQAMLLQPNKKTLKKLREVLHELYKHLDSSAAAIIDAPMDIPGLNLSQQ 363

Query: 309 ESHPYVSFTIN 277
           E +PYV + I+
Sbjct: 364 EYYPYVYYKID 374

>VATC_BOVIN (P21282) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C|
           subunit) (Vacuolar proton pump C subunit)
          Length = 381

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = -1

Query: 486 ESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSSYWRSEDDVGMAAGLG-GET 310
           ES+LRYGLP  F +++L P+ K+ KK+R +L  L  + +SS     D      GL   + 
Sbjct: 304 ESVLRYGLPVNFQAMLLQPNKKTMKKLREVLYELYKHLDSSAAAIIDAPMDIPGLNLSQQ 363

Query: 309 ESHPYVSFTIN 277
           E +PYV + I+
Sbjct: 364 EYYPYVYYKID 374

>VATC_SCHPO (Q9HDW6) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C|
           subunit) (Vacuolar proton pump C subunit)
          Length = 394

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
 Frame = -1

Query: 486 ESILRYGLPARFLSVVLAPSTKSEKKVRNILEG----LCGNT--NSSYWRSEDDVGM--- 334
           ESILRYGLP  F SV+  P  KSE K++NIL      L  N   N+     +   G+   
Sbjct: 310 ESILRYGLPPDFSSVIFQPMAKSEVKIKNILLSKYAYLAQNPVGNNKVKNVDSSAGLDES 369

Query: 333 AAGLGGETESHPYVSFTI 280
            A L  + E  P+V FT+
Sbjct: 370 MADLNLDEEYLPFVLFTV 387

>VATC_CAEEL (Q9XXU9) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C|
           subunit) (Vacuolar proton pump C subunit)
          Length = 384

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -1

Query: 486 ESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSSYWRSEDDVGMAAGLG--GE 313
           ES+LRYGLP  F + V+ P+   +KK+R  L  L  + + S     D +  +  L   G 
Sbjct: 307 ESVLRYGLPVNFQAAVIEPAKGQQKKLRQELHKLYIHLDGSAAGPIDTLEDSPALMSLGV 366

Query: 312 TESHPYVSFTIN 277
            E +PYV F +N
Sbjct: 367 NEYYPYVFFKLN 378

>VATC_DICDI (P54648) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C|
           subunit) (Vacuolar proton pump C subunit)
          Length = 368

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 19/71 (26%), Positives = 40/71 (56%)
 Frame = -1

Query: 486 ESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSSYWRSEDDVGMAAGLGGETE 307
           ES+LR+G+P  F ++++ P   ++KKVR+IL        S++   +++           +
Sbjct: 302 ESVLRFGIPFNFQAILMKPQKGADKKVRDILFDQFKYLGSAHISGKNET------DDSEK 355

Query: 306 SHPYVSFTINF 274
            +PY+S ++N+
Sbjct: 356 FYPYISVSVNW 366

>PSAA_HUPLU (Q5SD06) Photosystem I P700 chlorophyll a apoprotein A1 (PsaA)|
           (PSI-A)
          Length = 750

 Score = 26.6 bits (57), Expect(2) = 2.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 371 TAATGDLKTTWVWLLAWEARQSPTHT 294
           T A G   TTW+W L  +A    +HT
Sbjct: 35  TLAKGPSTTTWIWNLHADAHDFDSHT 60



 Score = 22.7 bits (47), Expect(2) = 2.1
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 288 FTINFV*GCLMYIIL*HQFFHGMSVSVHTSVVDDP 184
           F+ +F    +++I L   +FHG   S H + + DP
Sbjct: 71  FSAHFGQLAIIFIWLSGMYFHGARFSNHEAWLSDP 105

>CTL5_MACFA (Q95JW2) Choline transporter-like protein 5 (Solute carrier family|
           44 member 5)
          Length = 717

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 162 FGEPRTY-PGTKWDLSFLVLLRCCNCLLFVQCCITGYIIVI*VTRFHNNKIR 10
           FG+PRTY P  K  +S         C++F+  CI GYI++  V   H +  R
Sbjct: 17  FGDPRTYDPDFKGPVSNRSCTDVLCCMIFL-LCIVGYIVLGLVAWVHGDPRR 67

>Y177_TREPA (O83207) Hypothetical protein TP0177|
          Length = 436

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = -1

Query: 486 ESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSSYWRSE 349
           E I R GLP     +V   S       RNI   +C +T+ S+W +E
Sbjct: 140 EQITRVGLP-----IVAVSSALQALLYRNISPDICMSTDGSFWAAE 180

>VATC_YEAST (P31412) Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C|
           subunit) (Vacuolar proton pump C subunit) (V-ATPase 42
           kDa subunit)
          Length = 391

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
 Frame = -1

Query: 486 ESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSSYW---------RSEDDVGM 334
           ES+LRYGLP  F   ++A   K+  K ++ L    G    + +         + +  +  
Sbjct: 313 ESVLRYGLPPHFNIKIIAVPPKNLSKCKSELIDAFGFLGGNAFMKDKKGKINKQDTSLHQ 372

Query: 333 AAGLGGETESHPYVSFTIN 277
            A L  +TE  P+V + IN
Sbjct: 373 YASL-VDTEYEPFVMYIIN 390


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,654,936
Number of Sequences: 219361
Number of extensions: 1543175
Number of successful extensions: 4701
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4699
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)