| Clone Name | rbaal39c20 |
|---|---|
| Clone Library Name | barley_pub |
>YGL4_YEAST (P53134) Putative oligopeptide transporter YGL114w| Length = 725 Score = 59.3 bits (142), Expect = 1e-08 Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 5/178 (2%) Frame = -1 Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGNPDGMFKAPYAVIFRE 507 D KTG+L +SPR+ F +QLIG +++ + Y + I P F+ P AV++ + Sbjct: 549 DLKTGHLLGASPRAQFCAQLIGACWSIILSSFMYLCYNKVYSI--PSEQFRIPTAVVWID 606 Query: 506 MSILGVEGFSALPQHCLXXXXXXXXXXXXINLLRDVTPD---SVSKFIPLPMAMAVPFYI 336 + L V G LP L ++L+R+ D +IP +A+ V + Sbjct: 607 CARL-VTG-KGLPDKALECSMILGVIFAVLSLIRNTYRDYGYGWILYIPSGVAVGVGIFN 664 Query: 335 GAYFAIDMFVGTVILFVWEKINRKESEDFSGAV--ASGLICGDGIWSVPSAILSIMRI 168 F I F+G W K +R + + + +SGL+ G+GI+SV + + + + Sbjct: 665 SPSFTIARFIGGWASHFWLKNHRGDLNAKTKMIVFSSGLVLGEGIFSVINMLFICLNV 722
>OPT9_ARATH (Q9FJD2) Probable oligopeptide transporter 9 (AtOPT9)| Length = 741 Score = 38.9 bits (89), Expect = 0.015 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 8/72 (11%) Frame = -1 Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------PDGMFKA 531 DFK G PRSMF++Q++GT + V+ T W W DI + PD + Sbjct: 517 DFKLGLYMKIPPRSMFMAQVVGTLVSVVVYTGTAW--WLMVDIPHLCDKSLLPPDSEWTC 574 Query: 530 PYAVIFREMSIL 495 P +F + S++ Sbjct: 575 PMDRVFFDASVI 586
>OPT7_ARATH (O82485) Oligopeptide transporter 7 (AtOPT7)| Length = 766 Score = 38.1 bits (87), Expect = 0.025 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Frame = -1 Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN-----PDGMFKAPYA 522 DFK G+ PR+MF++Q++GT + C + T W W I N + ++ P Sbjct: 546 DFKLGHYMKIPPRTMFMAQIVGTLISCFVYLTTAW--WLMETIPNICDSVTNSVWTCPSD 603 Query: 521 VIFREMSIL 495 +F + S++ Sbjct: 604 KVFYDASVI 612
>OPT5_ARATH (Q9SUA4) Oligopeptide transporter 5 (AtOPT5)| Length = 753 Score = 37.4 bits (85), Expect = 0.043 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%) Frame = -1 Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIA-PLTFWLYWTAFDIGNPDGMFKA-----PY 525 DFK G+ PRSMF+ QL+ T + ++ T+WL + +I N D + K+ P Sbjct: 529 DFKLGHYMKIPPRSMFIVQLVATIVASTVSFGTTWWLLSSVENICNTDMLPKSSPWTCPG 588 Query: 524 AVIFREMSIL 495 V+F SI+ Sbjct: 589 DVVFYNASII 598
>OPT1_ARATH (Q9FG72) Oligopeptide transporter 1 (AtOPT1)| Length = 755 Score = 34.7 bits (78), Expect = 0.28 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -1 Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIA-PLTFWLYWTAFDIGNPD 546 DFK G+ PRSMF+ QL+ T + + T+WL + +I N D Sbjct: 531 DFKLGHYMKIPPRSMFIVQLVATVVASTVCFGTTWWLITSVENICNVD 578
>OPT6_ARATH (Q9T095) Oligopeptide transporter 6 (AtOPT6)| Length = 736 Score = 33.9 bits (76), Expect = 0.48 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 8/72 (11%) Frame = -1 Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------PDGMFKA 531 DFK G+ PRSMF++Q+ GT + V+ T W W +I + D + Sbjct: 512 DFKLGHYMKIPPRSMFMAQVAGTLVAVVVYTGTAW--WLMEEIPHLCDTSLLPSDSQWTC 569 Query: 530 PYAVIFREMSIL 495 P +F + S++ Sbjct: 570 PMDRVFFDASVI 581
>TOXC_COCCA (Q92215) Putative fatty acid synthase subunit TOXC [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2.3.1.3 Length = 2080 Score = 33.1 bits (74), Expect = 0.82 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%) Frame = +1 Query: 379 LDTLSGVTSLRRLIAMAAKKKKE---QIARQCCGSAENPSTP 495 LDTL+GVT RL+ + A + +E +I RQC ++ STP Sbjct: 1927 LDTLAGVTDRLRLLQINASEMEECLHEIIRQCVQETKSKSTP 1968
>OPT4_ARATH (Q9FME8) Oligopeptide transporter 4 (AtOPT4)| Length = 729 Score = 32.7 bits (73), Expect = 1.1 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 8/72 (11%) Frame = -1 Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------PDGMFKA 531 DFK G+ PRSMF+ Q IGT L I W W I N P+ + Sbjct: 507 DFKLGHYMKIPPRSMFLVQFIGTILAGTINITVAW--WQLNSIKNICQEELLPPNSPWTC 564 Query: 530 PYAVIFREMSIL 495 P +F + S++ Sbjct: 565 PGDRVFFDASVI 576
>SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)| Length = 960 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = -1 Query: 407 RDVTPDSVSKFIPLPMAMAVPFYIGAYFAIDMFV-GTVILFVWEKINRKESED 252 RD++P S S+ IP+P+ +A + A FA+ V G ++ + NR+ S+D Sbjct: 621 RDLSPASASRSIPIPLLLAC---VAAAFALGASVSGLLVSCACRRANRRRSKD 670
>OPT2_ARATH (O04514) Probable oligopeptide transporter 2 (AtOPT2)| Length = 722 Score = 32.0 bits (71), Expect = 1.8 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 6/70 (8%) Frame = -1 Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAF------DIGNPDGMFKAPY 525 DFK G+ PRSMF+ Q IGT + + W T+ ++ P+ + P Sbjct: 473 DFKLGHYMKIPPRSMFLVQFIGTVIAGTVNISVAWYLLTSVENICQKELLPPNSPWTCPS 532 Query: 524 AVIFREMSIL 495 +F + S++ Sbjct: 533 DRVFFDASVI 542
>SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)| Length = 931 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = -1 Query: 407 RDVTPDSVSKFIPLPMAMAVPFYIGAYFAIDMFV-GTVILFVWEKINRKESED 252 RD++P S S+ IP+P+ +A + A FA+ V G ++ + NR+ S+D Sbjct: 591 RDLSPASASRSIPIPLLLAC---VAAAFALGASVSGLLVSCACRRANRRRSKD 640
>OPT8_ARATH (Q9FJD1) Probable oligopeptide transporter 8 (AtOPT8)| Length = 733 Score = 30.8 bits (68), Expect = 4.1 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 8/72 (11%) Frame = -1 Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------PDGMFKA 531 D K G PR+MF++Q++GT + + T W W +I N P + Sbjct: 511 DLKLGTYMKIPPRTMFMAQVVGTLVAVIAYAGTAW--WLMAEIPNLCDTNLLPPGSQWTC 568 Query: 530 PYAVIFREMSIL 495 P +F + S++ Sbjct: 569 PSDRVFFDASVI 580
>Y561_HAEIN (P44016) Putative oligopeptide transporter HI0561| Length = 633 Score = 30.0 bits (66), Expect = 6.9 Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 17/185 (9%) Frame = -1 Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGC-VIAPLTFWLYWTAFDIG-------NPDGMFKA 531 D KTG L ++P V+ +IG +G VIAP+ LY G +P A Sbjct: 404 DLKTGLLVEATPWRQQVALIIGCFVGALVIAPVLEILYHAYGFSGALPRPDMDPSQALSA 463 Query: 530 PYAVIFREMSILGVEGFSALPQHCLXXXXXXXXXXXXINLLRDVTPDSVSKFIPLP-MAM 354 P A + +S G+ + L L+ V+ +K LP +A+ Sbjct: 464 PQATLMTAIS-QGIFTNKLEWTYILTGVGLGAVLITIDAFLKKVS----NKVFSLPVIAV 518 Query: 353 AVPFYIGAYFAIDMFVGTVILFVW----EKINRKE----SEDFSGAVASGLICGDGIWSV 198 + Y+ + VG + ++ K+ KE +E F ++GLI G+ + V Sbjct: 519 GIGIYLPPSINTPVIVGAFLAWIMARHIAKLGNKEVSAKAERFGTLFSAGLIVGESLMGV 578 Query: 197 PSAIL 183 A + Sbjct: 579 ILAFI 583 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,488,448 Number of Sequences: 219361 Number of extensions: 2295578 Number of successful extensions: 6138 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 5884 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6123 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6825954960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)