ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal39c20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YGL4_YEAST (P53134) Putative oligopeptide transporter YGL114w 59 1e-08
2OPT9_ARATH (Q9FJD2) Probable oligopeptide transporter 9 (AtOPT9) 39 0.015
3OPT7_ARATH (O82485) Oligopeptide transporter 7 (AtOPT7) 38 0.025
4OPT5_ARATH (Q9SUA4) Oligopeptide transporter 5 (AtOPT5) 37 0.043
5OPT1_ARATH (Q9FG72) Oligopeptide transporter 1 (AtOPT1) 35 0.28
6OPT6_ARATH (Q9T095) Oligopeptide transporter 6 (AtOPT6) 34 0.48
7TOXC_COCCA (Q92215) Putative fatty acid synthase subunit TOXC [I... 33 0.82
8OPT4_ARATH (Q9FME8) Oligopeptide transporter 4 (AtOPT4) 33 1.1
9SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y) 32 1.8
10OPT2_ARATH (O04514) Probable oligopeptide transporter 2 (AtOPT2) 32 1.8
11SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sem... 32 1.8
12OPT8_ARATH (Q9FJD1) Probable oligopeptide transporter 8 (AtOPT8) 31 4.1
13Y561_HAEIN (P44016) Putative oligopeptide transporter HI0561 30 6.9

>YGL4_YEAST (P53134) Putative oligopeptide transporter YGL114w|
          Length = 725

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
 Frame = -1

Query: 686  DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGNPDGMFKAPYAVIFRE 507
            D KTG+L  +SPR+ F +QLIG     +++   +  Y   + I  P   F+ P AV++ +
Sbjct: 549  DLKTGHLLGASPRAQFCAQLIGACWSIILSSFMYLCYNKVYSI--PSEQFRIPTAVVWID 606

Query: 506  MSILGVEGFSALPQHCLXXXXXXXXXXXXINLLRDVTPD---SVSKFIPLPMAMAVPFYI 336
             + L V G   LP   L            ++L+R+   D       +IP  +A+ V  + 
Sbjct: 607  CARL-VTG-KGLPDKALECSMILGVIFAVLSLIRNTYRDYGYGWILYIPSGVAVGVGIFN 664

Query: 335  GAYFAIDMFVGTVILFVWEKINRKESEDFSGAV--ASGLICGDGIWSVPSAILSIMRI 168
               F I  F+G      W K +R +    +  +  +SGL+ G+GI+SV + +   + +
Sbjct: 665  SPSFTIARFIGGWASHFWLKNHRGDLNAKTKMIVFSSGLVLGEGIFSVINMLFICLNV 722



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>OPT9_ARATH (Q9FJD2) Probable oligopeptide transporter 9 (AtOPT9)|
          Length = 741

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
 Frame = -1

Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------PDGMFKA 531
           DFK G      PRSMF++Q++GT +  V+   T W  W   DI +        PD  +  
Sbjct: 517 DFKLGLYMKIPPRSMFMAQVVGTLVSVVVYTGTAW--WLMVDIPHLCDKSLLPPDSEWTC 574

Query: 530 PYAVIFREMSIL 495
           P   +F + S++
Sbjct: 575 PMDRVFFDASVI 586



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>OPT7_ARATH (O82485) Oligopeptide transporter 7 (AtOPT7)|
          Length = 766

 Score = 38.1 bits (87), Expect = 0.025
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
 Frame = -1

Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN-----PDGMFKAPYA 522
           DFK G+     PR+MF++Q++GT + C +   T W  W    I N      + ++  P  
Sbjct: 546 DFKLGHYMKIPPRTMFMAQIVGTLISCFVYLTTAW--WLMETIPNICDSVTNSVWTCPSD 603

Query: 521 VIFREMSIL 495
            +F + S++
Sbjct: 604 KVFYDASVI 612



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>OPT5_ARATH (Q9SUA4) Oligopeptide transporter 5 (AtOPT5)|
          Length = 753

 Score = 37.4 bits (85), Expect = 0.043
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
 Frame = -1

Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIA-PLTFWLYWTAFDIGNPDGMFKA-----PY 525
           DFK G+     PRSMF+ QL+ T +   ++   T+WL  +  +I N D + K+     P 
Sbjct: 529 DFKLGHYMKIPPRSMFIVQLVATIVASTVSFGTTWWLLSSVENICNTDMLPKSSPWTCPG 588

Query: 524 AVIFREMSIL 495
            V+F   SI+
Sbjct: 589 DVVFYNASII 598



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>OPT1_ARATH (Q9FG72) Oligopeptide transporter 1 (AtOPT1)|
          Length = 755

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIA-PLTFWLYWTAFDIGNPD 546
           DFK G+     PRSMF+ QL+ T +   +    T+WL  +  +I N D
Sbjct: 531 DFKLGHYMKIPPRSMFIVQLVATVVASTVCFGTTWWLITSVENICNVD 578



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>OPT6_ARATH (Q9T095) Oligopeptide transporter 6 (AtOPT6)|
          Length = 736

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
 Frame = -1

Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------PDGMFKA 531
           DFK G+     PRSMF++Q+ GT +  V+   T W  W   +I +         D  +  
Sbjct: 512 DFKLGHYMKIPPRSMFMAQVAGTLVAVVVYTGTAW--WLMEEIPHLCDTSLLPSDSQWTC 569

Query: 530 PYAVIFREMSIL 495
           P   +F + S++
Sbjct: 570 PMDRVFFDASVI 581



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>TOXC_COCCA (Q92215) Putative fatty acid synthase subunit TOXC [Includes:|
            3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC
            4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH]
            (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase
            (EC 2.3.1.3
          Length = 2080

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +1

Query: 379  LDTLSGVTSLRRLIAMAAKKKKE---QIARQCCGSAENPSTP 495
            LDTL+GVT   RL+ + A + +E   +I RQC    ++ STP
Sbjct: 1927 LDTLAGVTDRLRLLQINASEMEECLHEIIRQCVQETKSKSTP 1968



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>OPT4_ARATH (Q9FME8) Oligopeptide transporter 4 (AtOPT4)|
          Length = 729

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 8/72 (11%)
 Frame = -1

Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------PDGMFKA 531
           DFK G+     PRSMF+ Q IGT L   I     W  W    I N        P+  +  
Sbjct: 507 DFKLGHYMKIPPRSMFLVQFIGTILAGTINITVAW--WQLNSIKNICQEELLPPNSPWTC 564

Query: 530 PYAVIFREMSIL 495
           P   +F + S++
Sbjct: 565 PGDRVFFDASVI 576



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>SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 960

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -1

Query: 407 RDVTPDSVSKFIPLPMAMAVPFYIGAYFAIDMFV-GTVILFVWEKINRKESED 252
           RD++P S S+ IP+P+ +A    + A FA+   V G ++     + NR+ S+D
Sbjct: 621 RDLSPASASRSIPIPLLLAC---VAAAFALGASVSGLLVSCACRRANRRRSKD 670



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>OPT2_ARATH (O04514) Probable oligopeptide transporter 2 (AtOPT2)|
          Length = 722

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
 Frame = -1

Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAF------DIGNPDGMFKAPY 525
           DFK G+     PRSMF+ Q IGT +   +     W   T+       ++  P+  +  P 
Sbjct: 473 DFKLGHYMKIPPRSMFLVQFIGTVIAGTVNISVAWYLLTSVENICQKELLPPNSPWTCPS 532

Query: 524 AVIFREMSIL 495
             +F + S++
Sbjct: 533 DRVFFDASVI 542



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>SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 931

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -1

Query: 407 RDVTPDSVSKFIPLPMAMAVPFYIGAYFAIDMFV-GTVILFVWEKINRKESED 252
           RD++P S S+ IP+P+ +A    + A FA+   V G ++     + NR+ S+D
Sbjct: 591 RDLSPASASRSIPIPLLLAC---VAAAFALGASVSGLLVSCACRRANRRRSKD 640



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>OPT8_ARATH (Q9FJD1) Probable oligopeptide transporter 8 (AtOPT8)|
          Length = 733

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
 Frame = -1

Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------PDGMFKA 531
           D K G      PR+MF++Q++GT +  +    T W  W   +I N        P   +  
Sbjct: 511 DLKLGTYMKIPPRTMFMAQVVGTLVAVIAYAGTAW--WLMAEIPNLCDTNLLPPGSQWTC 568

Query: 530 PYAVIFREMSIL 495
           P   +F + S++
Sbjct: 569 PSDRVFFDASVI 580



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>Y561_HAEIN (P44016) Putative oligopeptide transporter HI0561|
          Length = 633

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 17/185 (9%)
 Frame = -1

Query: 686 DFKTGYLTLSSPRSMFVSQLIGTALGC-VIAPLTFWLYWTAFDIG-------NPDGMFKA 531
           D KTG L  ++P    V+ +IG  +G  VIAP+   LY      G       +P     A
Sbjct: 404 DLKTGLLVEATPWRQQVALIIGCFVGALVIAPVLEILYHAYGFSGALPRPDMDPSQALSA 463

Query: 530 PYAVIFREMSILGVEGFSALPQHCLXXXXXXXXXXXXINLLRDVTPDSVSKFIPLP-MAM 354
           P A +   +S  G+        + L               L+ V+    +K   LP +A+
Sbjct: 464 PQATLMTAIS-QGIFTNKLEWTYILTGVGLGAVLITIDAFLKKVS----NKVFSLPVIAV 518

Query: 353 AVPFYIGAYFAIDMFVGTVILFVW----EKINRKE----SEDFSGAVASGLICGDGIWSV 198
            +  Y+       + VG  + ++      K+  KE    +E F    ++GLI G+ +  V
Sbjct: 519 GIGIYLPPSINTPVIVGAFLAWIMARHIAKLGNKEVSAKAERFGTLFSAGLIVGESLMGV 578

Query: 197 PSAIL 183
             A +
Sbjct: 579 ILAFI 583


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,488,448
Number of Sequences: 219361
Number of extensions: 2295578
Number of successful extensions: 6138
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6123
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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