ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal39c13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 180 2e-42
2dbj|AK099798.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 2e-42
3dbj|AK061957.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 2e-42
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 180 2e-42
5emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC OJ1126... 180 2e-42
6dbj|AB112936.1| Zea mays ZmpOMT1 mRNA for plastidic 2-oxoglutara... 113 4e-22
7gb|AY106468.1| Zea mays PCO103506 mRNA sequence 113 4e-22
8emb|BX830891.1|CNS0A0U0 Arabidopsis thaliana Full-length cDNA Co... 62 1e-06
9ref|NM_121289.3| Arabidopsis thaliana oxoglutarate:malate antipo... 54 3e-04
10emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, B... 54 3e-04
11gb|AF370494.1|AF370494 Arabidopsis thaliana 2-oxoglutarate/malat... 54 3e-04
12emb|BX831984.1|CNS0A12U Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
13emb|BX831708.1|CNS0A15V Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
14emb|BX831583.1|CNS0A162 Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
15emb|BX831893.1|CNS0A11L Arabidopsis thaliana Full-length cDNA Co... 52 0.001
16emb|BX833869.1|CNS0A0DK Arabidopsis thaliana Full-length cDNA Co... 52 0.001
17gb|AY279308.1| Malus x domestica oxoglutarate/malate translocato... 44 0.29
18dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
19dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
20dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
21gb|AC110607.7| Homo sapiens chromosome 15, clone CTD-2632K10, co... 42 1.1
22gb|AC092891.5| Homo sapiens 12 BAC RP11-495C19 (Roswell Park Can... 42 1.1
23gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 4.5
24emb|BX897725.7| Zebrafish DNA sequence from clone CH211-244P18 i... 40 4.5
25gb|AC006499.13|AC006499 Homo sapiens chromosome 4 clone C0494H11... 40 4.5
26emb|AL929049.4| Zebrafish DNA sequence from clone DKEY-14A13 in ... 40 4.5
27emb|AL672148.8| Mouse DNA sequence from clone RP23-369O15 on chr... 40 4.5

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  180 bits (91), Expect = 2e-42
 Identities = 173/201 (86%)
 Strand = Plus / Minus

                                                                            
Query: 133      catttactgtgtttctcaccacaaaccaatcatcttccaccagaagcctccagcaccaag 192
                |||||||| || | |||||||||| || | ||||||||||||||||||||||||||||||
Sbjct: 20049373 catttactttgctcctcaccacaagccgagcatcttccaccagaagcctccagcaccaag 20049314

                                                                            
Query: 193      ccagatgatgatgttaacaacggagatgacaaatccatagccccaccactcagccagcgg 252
                |||||||||||||||||| | ||| |||||||||||||| |||||||||| |||||| ||
Sbjct: 20049313 ccagatgatgatgttaacgatggaaatgacaaatccatacccccaccactgagccagtgg 20049254

                                                                            
Query: 253      aacatagcccgctccatagaagacgggggctgaccctatgccataatgggtcaggccacc 312
                ||||||||| || || |||||||| || || ||||| || ||||| || || || |||||
Sbjct: 20049253 aacatagccagcaccgtagaagacaggagcagacccaattccatagtgcgtgagtccacc 20049194

                                     
Query: 313      catgaggnttgaaangaatga 333
                ||||| | |||| | ||||||
Sbjct: 20049193 catgatgtttgagaggaatga 20049173



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 22       ggtacaaactaaaagaatgg 41
                ||||||||||||||||||||
Sbjct: 20049506 ggtacaaactaaaagaatgg 20049487



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>dbj|AK099798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097M20, full
            insert sequence
          Length = 1962

 Score =  180 bits (91), Expect = 2e-42
 Identities = 173/201 (86%)
 Strand = Plus / Minus

                                                                        
Query: 133  catttactgtgtttctcaccacaaaccaatcatcttccaccagaagcctccagcaccaag 192
            |||||||| || | |||||||||| || | ||||||||||||||||||||||||||||||
Sbjct: 1700 catttactttgctcctcaccacaagccgagcatcttccaccagaagcctccagcaccaag 1641

                                                                        
Query: 193  ccagatgatgatgttaacaacggagatgacaaatccatagccccaccactcagccagcgg 252
            |||||||||||||||||| | ||| |||||||||||||| |||||||||| |||||| ||
Sbjct: 1640 ccagatgatgatgttaacgatggaaatgacaaatccatacccccaccactgagccagtgg 1581

                                                                        
Query: 253  aacatagcccgctccatagaagacgggggctgaccctatgccataatgggtcaggccacc 312
            ||||||||| || || |||||||| || || ||||| || ||||| || || || |||||
Sbjct: 1580 aacatagccagcaccgtagaagacaggagcagacccaattccatagtgcgtgagtccacc 1521

                                 
Query: 313  catgaggnttgaaangaatga 333
            ||||| | |||| | ||||||
Sbjct: 1520 catgatgtttgagaggaatga 1500



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   ggtacaaactaaaagaatgg 41
            ||||||||||||||||||||
Sbjct: 1833 ggtacaaactaaaagaatgg 1814



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>dbj|AK061957.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F09, full
            insert sequence
          Length = 1506

 Score =  180 bits (91), Expect = 2e-42
 Identities = 173/201 (86%)
 Strand = Plus / Minus

                                                                        
Query: 133  catttactgtgtttctcaccacaaaccaatcatcttccaccagaagcctccagcaccaag 192
            |||||||| || | |||||||||| || | ||||||||||||||||||||||||||||||
Sbjct: 1308 catttactttgctcctcaccacaagccgagcatcttccaccagaagcctccagcaccaag 1249

                                                                        
Query: 193  ccagatgatgatgttaacaacggagatgacaaatccatagccccaccactcagccagcgg 252
            |||||||||||||||||| | ||| |||||||||||||| |||||||||| |||||| ||
Sbjct: 1248 ccagatgatgatgttaacgatggaaatgacaaatccatacccccaccactgagccagtgg 1189

                                                                        
Query: 253  aacatagcccgctccatagaagacgggggctgaccctatgccataatgggtcaggccacc 312
            ||||||||| || || |||||||| || || ||||| || ||||| || || || |||||
Sbjct: 1188 aacatagccagcaccgtagaagacaggagcagacccaattccatagtgcgtgagtccacc 1129

                                 
Query: 313  catgaggnttgaaangaatga 333
            ||||| | |||| | ||||||
Sbjct: 1128 catgatgtttgagaggaatga 1108



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   ggtacaaactaaaagaatgg 41
            ||||||||||||||||||||
Sbjct: 1441 ggtacaaactaaaagaatgg 1422



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  180 bits (91), Expect = 2e-42
 Identities = 173/201 (86%)
 Strand = Plus / Minus

                                                                            
Query: 133      catttactgtgtttctcaccacaaaccaatcatcttccaccagaagcctccagcaccaag 192
                |||||||| || | |||||||||| || | ||||||||||||||||||||||||||||||
Sbjct: 19975587 catttactttgctcctcaccacaagccgagcatcttccaccagaagcctccagcaccaag 19975528

                                                                            
Query: 193      ccagatgatgatgttaacaacggagatgacaaatccatagccccaccactcagccagcgg 252
                |||||||||||||||||| | ||| |||||||||||||| |||||||||| |||||| ||
Sbjct: 19975527 ccagatgatgatgttaacgatggaaatgacaaatccatacccccaccactgagccagtgg 19975468

                                                                            
Query: 253      aacatagcccgctccatagaagacgggggctgaccctatgccataatgggtcaggccacc 312
                ||||||||| || || |||||||| || || ||||| || ||||| || || || |||||
Sbjct: 19975467 aacatagccagcaccgtagaagacaggagcagacccaattccatagtgcgtgagtccacc 19975408

                                     
Query: 313      catgaggnttgaaangaatga 333
                ||||| | |||| | ||||||
Sbjct: 19975407 catgatgtttgagaggaatga 19975387



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 22       ggtacaaactaaaagaatgg 41
                ||||||||||||||||||||
Sbjct: 19975720 ggtacaaactaaaagaatgg 19975701



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>emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC OJ1126_F07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 99791

 Score =  180 bits (91), Expect = 2e-42
 Identities = 173/201 (86%)
 Strand = Plus / Minus

                                                                         
Query: 133   catttactgtgtttctcaccacaaaccaatcatcttccaccagaagcctccagcaccaag 192
             |||||||| || | |||||||||| || | ||||||||||||||||||||||||||||||
Sbjct: 29535 catttactttgctcctcaccacaagccgagcatcttccaccagaagcctccagcaccaag 29476

                                                                         
Query: 193   ccagatgatgatgttaacaacggagatgacaaatccatagccccaccactcagccagcgg 252
             |||||||||||||||||| | ||| |||||||||||||| |||||||||| |||||| ||
Sbjct: 29475 ccagatgatgatgttaacgatggaaatgacaaatccatacccccaccactgagccagtgg 29416

                                                                         
Query: 253   aacatagcccgctccatagaagacgggggctgaccctatgccataatgggtcaggccacc 312
             ||||||||| || || |||||||| || || ||||| || ||||| || || || |||||
Sbjct: 29415 aacatagccagcaccgtagaagacaggagcagacccaattccatagtgcgtgagtccacc 29356

                                  
Query: 313   catgaggnttgaaangaatga 333
             ||||| | |||| | ||||||
Sbjct: 29355 catgatgtttgagaggaatga 29335



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    ggtacaaactaaaagaatgg 41
             ||||||||||||||||||||
Sbjct: 29668 ggtacaaactaaaagaatgg 29649



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>dbj|AB112936.1| Zea mays ZmpOMT1 mRNA for plastidic 2-oxoglutarate/malate
            transporter, complete cds
          Length = 1907

 Score =  113 bits (57), Expect = 4e-22
 Identities = 114/133 (85%)
 Strand = Plus / Minus

                                                                        
Query: 147  ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 206
            |||||||||  || || ||||||||||||||||| ||  | || ||||||||||||||||
Sbjct: 1760 ctcaccacagcccgattatcttccaccagaagccgcccaccccgagccagatgatgatgt 1701

                                                                        
Query: 207  taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 266
            | ||||||||||||||||| |||||||||||||||| |||||  || ||||| || || |
Sbjct: 1700 ttacaacggagatgacaaacccatagccccaccactgagccaatgggacatacccggcgc 1641

                         
Query: 267  catagaagacggg 279
            | |||||||||||
Sbjct: 1640 cgtagaagacggg 1628



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>gb|AY106468.1| Zea mays PCO103506 mRNA sequence
          Length = 845

 Score =  113 bits (57), Expect = 4e-22
 Identities = 114/133 (85%)
 Strand = Plus / Minus

                                                                       
Query: 147 ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 206
           |||||||||  || || ||||||||||||||||| ||  | || ||||||||||||||||
Sbjct: 581 ctcaccacagcccgattatcttccaccagaagccgcccaccccgagccagatgatgatgt 522

                                                                       
Query: 207 taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 266
           | ||||||||||||||||| |||||||||||||||| |||||  || ||||| || || |
Sbjct: 521 ttacaacggagatgacaaacccatagccccaccactgagccaatgggacatacccggcgc 462

                        
Query: 267 catagaagacggg 279
           | |||||||||||
Sbjct: 461 cgtagaagacggg 449



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>emb|BX830891.1|CNS0A0U0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS37ZB03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1880

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 127/159 (79%)
 Strand = Plus / Minus

                                                                        
Query: 147  ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 206
            |||||||||| ||||| | ||||||||||   || ||  |||||||||||||||  ||||
Sbjct: 1696 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 1637

                                                                        
Query: 207  taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 266
            | || |  ||||| |  ||||||||||||||||| | ||||||||| || |||   ||||
Sbjct: 1636 tgactattgagatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 1577

                                                   
Query: 267  catagaagacgggggctgaccctatgccataatgggtca 305
            | |||||||  || || ||||| || |||||||||||||
Sbjct: 1576 cgtagaagataggcgcagacccgataccataatgggtca 1538



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>ref|NM_121289.3| Arabidopsis thaliana oxoglutarate:malate antiporter AT5G12860 mRNA,
            complete cds
          Length = 1946

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 126/159 (79%)
 Strand = Plus / Minus

                                                                        
Query: 147  ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 206
            |||||||||| ||||| | ||||||||||   || ||  |||||||||||||||  ||||
Sbjct: 1706 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 1647

                                                                        
Query: 207  taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 266
            | || |  || || |  ||||||||||||||||| | ||||||||| || |||   ||||
Sbjct: 1646 tgactattgaaatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 1587

                                                   
Query: 267  catagaagacgggggctgaccctatgccataatgggtca 305
            | |||||||  || || ||||| || |||||||||||||
Sbjct: 1586 cgtagaagataggcgcagacccgataccataatgggtca 1548



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>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project)
          Length = 90020

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 126/159 (79%)
 Strand = Plus / Plus

                                                                         
Query: 147   ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 206
             |||||||||| ||||| | ||||||||||   || ||  |||||||||||||||  ||||
Sbjct: 11743 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 11802

                                                                         
Query: 207   taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 266
             | || |  || || |  ||||||||||||||||| | ||||||||| || |||   ||||
Sbjct: 11803 tgactattgaaatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 11862

                                                    
Query: 267   catagaagacgggggctgaccctatgccataatgggtca 305
             | |||||||  || || ||||| || |||||||||||||
Sbjct: 11863 cgtagaagataggcgcagacccgataccataatgggtca 11901



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>gb|AF370494.1|AF370494 Arabidopsis thaliana 2-oxoglutarate/malate translocator
            precursor-like protein (T24H18.30) mRNA, complete cds
          Length = 1827

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 126/159 (79%)
 Strand = Plus / Minus

                                                                        
Query: 147  ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 206
            |||||||||| ||||| | ||||||||||   || ||  |||||||||||||||  ||||
Sbjct: 1628 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 1569

                                                                        
Query: 207  taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 266
            | || |  || || |  ||||||||||||||||| | ||||||||| || |||   ||||
Sbjct: 1568 tgactattgaaatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 1509

                                                   
Query: 267  catagaagacgggggctgaccctatgccataatgggtca 305
            | |||||||  || || ||||| || |||||||||||||
Sbjct: 1508 cgtagaagataggcgcagacccgataccataatgggtca 1470



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>emb|BX831984.1|CNS0A12U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH43ZF10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 865

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 126/159 (79%)
 Strand = Plus / Minus

                                                                       
Query: 147 ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 206
           |||||||||| ||||| | ||||||||||   || ||  |||||||||||||||  ||||
Sbjct: 681 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 622

                                                                       
Query: 207 taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 266
           | || |  || || |  ||||||||||||||||| | ||||||||| || |||   ||||
Sbjct: 621 tgactattgaaatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 562

                                                  
Query: 267 catagaagacgggggctgaccctatgccataatgggtca 305
           | |||||||  || || ||||| || |||||||||||||
Sbjct: 561 cgtagaagataggcgcagacccgataccataatgggtca 523



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>emb|BX831708.1|CNS0A15V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH25ZB11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1833

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 126/159 (79%)
 Strand = Plus / Minus

                                                                        
Query: 147  ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 206
            |||||||||| ||||| | ||||||||||   || ||  |||||||||||||||  ||||
Sbjct: 1694 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 1635

                                                                        
Query: 207  taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 266
            | || |  || || |  ||||||||||||||||| | ||||||||| || |||   ||||
Sbjct: 1634 tgactattgaaatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 1575

                                                   
Query: 267  catagaagacgggggctgaccctatgccataatgggtca 305
            | |||||||  || || ||||| || |||||||||||||
Sbjct: 1574 cgtagaagataggcgcagacccgataccataatgggtca 1536



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>emb|BX831583.1|CNS0A162 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH16ZF08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1841

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 126/159 (79%)
 Strand = Plus / Minus

                                                                        
Query: 147  ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 206
            |||||||||| ||||| | ||||||||||   || ||  |||||||||||||||  ||||
Sbjct: 1687 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 1628

                                                                        
Query: 207  taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 266
            | || |  || || |  ||||||||||||||||| | ||||||||| || |||   ||||
Sbjct: 1627 tgactattgaaatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 1568

                                                   
Query: 267  catagaagacgggggctgaccctatgccataatgggtca 305
            | |||||||  || || ||||| || |||||||||||||
Sbjct: 1567 cgtagaagataggcgcagacccgataccataatgggtca 1529



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>emb|BX831893.1|CNS0A11L Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH37ZF03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1842

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                        
Query: 224  aatccatagccccaccactcagccagcggaacatagcccgctccatagaagacgggggct 283
            ||||||||||||||||| | ||||||||| || |||   ||||| |||||||  || || 
Sbjct: 1669 aatccatagccccaccatttagccagcggcacgtagttagctccgtagaagataggcgca 1610

                                  
Query: 284  gaccctatgccataatgggtca 305
            ||||| || |||||||||||||
Sbjct: 1609 gacccgataccataatgggtca 1588



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>emb|BX833869.1|CNS0A0DK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL80ZD02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 769

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                       
Query: 224 aatccatagccccaccactcagccagcggaacatagcccgctccatagaagacgggggct 283
           ||||||||||||||||| | ||||||||| || |||   ||||| |||||||  || || 
Sbjct: 452 aatccatagccccaccatttagccagcggcacgtagttagctccgtagaagataggcgca 393

                                 
Query: 284 gaccctatgccataatgggtca 305
           ||||| || |||||||||||||
Sbjct: 392 gacccgataccataatgggtca 371



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>gb|AY279308.1| Malus x domestica oxoglutarate/malate translocator-like mRNA,
           partial sequence
          Length = 419

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 266 ccatagaagacgggggctgaccctatgccataatgggtcaggccacccatgagg 319
           |||||||| || || ||||| || ||||| |||||||| || ||||||||||||
Sbjct: 98  ccatagaaaacaggtgctgatccaatgccgtaatgggtaagaccacccatgagg 45



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 196     gatgatgatgttaacaacggag 217
               ||||||||||||||||||||||
Sbjct: 5575716 gatgatgatgttaacaacggag 5575695



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>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0081K20
          Length = 117287

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 196   gatgatgatgttaacaacggag 217
             ||||||||||||||||||||||
Sbjct: 88801 gatgatgatgttaacaacggag 88780



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>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0431A02
          Length = 165038

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 196   gatgatgatgttaacaacggag 217
             ||||||||||||||||||||||
Sbjct: 37408 gatgatgatgttaacaacggag 37387



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>gb|AC110607.7| Homo sapiens chromosome 15, clone CTD-2632K10, complete sequence
          Length = 160452

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 231   agccccaccactcagccagcg 251
             |||||||||||||||||||||
Sbjct: 12214 agccccaccactcagccagcg 12194



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>gb|AC092891.5| Homo sapiens 12 BAC RP11-495C19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 109440

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 151   ccacaaaccaatcatcttccaccag 175
             |||||| ||||||||||||||||||
Sbjct: 83801 ccacaatccaatcatcttccaccag 83777



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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 107     cgccctcgtcgaaataggaagtcc 130
               ||||||||||||||||||| ||||
Sbjct: 1443551 cgccctcgtcgaaataggacgtcc 1443528



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>emb|BX897725.7| Zebrafish DNA sequence from clone CH211-244P18 in linkage group 20
              Contains the gene for a novel protein similar to vertebrate
              delta-like 4 (Drosophila) (DLL4), the vps18 gene for
              vacuolar protein sorting protein 18, the gene for a novel
              protein containing an SNF2 family N-terminal domain and a
              Helicase conserved C-terminal domain, the gene for a novel
              protein similar to vertebrate ras homolog gene family,
              member V (RHOV), the gene for a novel protein containing a
              ChaC-like protein domain and three CpG islands, complete
              sequence
          Length = 170125

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     ccacttgcaaatgttttgct 97
              ||||||||||||||||||||
Sbjct: 153015 ccacttgcaaatgttttgct 153034



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>gb|AC006499.13|AC006499 Homo sapiens chromosome 4 clone C0494H11, complete sequence
          Length = 195384

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   cagaagcctccagcaccaag 192
             ||||||||||||||||||||
Sbjct: 26195 cagaagcctccagcaccaag 26214



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>emb|AL929049.4| Zebrafish DNA sequence from clone DKEY-14A13 in linkage group 20,
              complete sequence
          Length = 223182

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     ccacttgcaaatgttttgct 97
              ||||||||||||||||||||
Sbjct: 160254 ccacttgcaaatgttttgct 160273



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>emb|AL672148.8| Mouse DNA sequence from clone RP23-369O15 on chromosome X, complete
              sequence
          Length = 130107

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 25     acaaactaaaagaatggatntgt 47
              ||||||||||||||||||| |||
Sbjct: 123012 acaaactaaaagaatggatgtgt 122990


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,456,044
Number of Sequences: 3902068
Number of extensions: 2456044
Number of successful extensions: 42991
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42906
Number of HSP's gapped (non-prelim): 84
length of query: 338
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 316
effective length of database: 17,147,199,772
effective search space: 5418515127952
effective search space used: 5418515127952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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