>SYM_METMP (Q6M0E5) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 663

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 82  HCEVKLQYSAKRCAALVHPSSMLHLCCISCDEKAELTASTH 204
           HCEV        C   + P+ +++  CI C+ K E+  +TH
Sbjct: 153 HCEV--------CGRHLEPTELVNPYCIHCNSKPEIKRTTH 185

>MPIP2_HUMAN (P30305) M-phase inducer phosphatase 2 (EC 3.1.3.48) (Dual|
           specificity phosphatase Cdc25B)
          Length = 580

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 64  RTTHPRHCEVKLQYSAKRCAALVHPSSMLHLCCISCDEKAEL 189
           + THP       +++++R A    PSS   L C+S D K E+
Sbjct: 204 KPTHPSSTHALAEWASRREAFAQRPSSAPDLMCLSPDRKMEV 245

>PRP8_MOUSE (Q99PV0) Pre-mRNA-processing-splicing factor 8 (Splicing factor Prp8)|
          Length = 2335

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 130  VHPSSMLHLCCISCDEKAELTASTHAKETLMPSRAMSWATNSGCA 264
            +H S ++ LC +   E   L   T  KET+ P +  S+  NS CA
Sbjct: 1585 IHESIVMDLCQVFDQELDALEIETVQKETIHPRK--SYKMNSSCA 1627

>PRP8_HUMAN (Q6P2Q9) Pre-mRNA-processing-splicing factor 8 (Splicing factor Prp8)|
            (PRP8 homolog) (220 kDa U5 snRNP-specific protein) (p220)
          Length = 2335

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 130  VHPSSMLHLCCISCDEKAELTASTHAKETLMPSRAMSWATNSGCA 264
            +H S ++ LC +   E   L   T  KET+ P +  S+  NS CA
Sbjct: 1585 IHESIVMDLCQVFDQELDALEIETVQKETIHPRK--SYKMNSSCA 1627

>PRP8_CAEEL (P34369) Pre-mRNA-splicing factor 8 homolog|
          Length = 2329

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 130  VHPSSMLHLCCISCDEKAELTASTHAKETLMPSRAMSWATNSGCA 264
            +H S ++ LC +   E   L   T  KET+ P +  S+  NS CA
Sbjct: 1578 IHESVVMDLCQVFDQELDALEIQTVQKETIHPRK--SYKMNSSCA 1620

>PECR_MOUSE (Q99MZ7) Peroxisomal trans-2-enoyl-CoA reductase (EC 1.3.1.38)|
          Length = 303

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +1

Query: 94  KLQYSAKRCAALVHPSSMLHLCCISCDEKAELTASTHAKETLMPSRAMSWATNSGCAXHA 273
           +L  +     A + PSS   +  I C+ + E   S   K TL     +++  N+G     
Sbjct: 54  RLTAAVDELRASLPPSSSAEVSAIQCNIRKEEEVSNLVKSTLAKYGKINFLVNNGGGQFM 113

Query: 274 APV 282
           APV
Sbjct: 114 APV 116

>FUMH_RHIOR (P55250) Fumarate hydratase, mitochondrial precursor (EC 4.2.1.2)|
           (Fumarase)
          Length = 494

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = +1

Query: 52  VSDSRTTHPRHCEVKLQYSAKRCAALVHPSSMLHLCC---ISCDEKAELTASTHAKETLM 222
           +SD+  +  ++C V ++ + K+ +++++ S ML       I  D+ A+     H + T +
Sbjct: 406 ISDASISFTKNCVVGIEANEKKISSIMNESLMLVTALNPHIGYDKAAKCAKKAHKEGTTL 465

Query: 223 PSRAMS 240
              A+S
Sbjct: 466 KEAALS 471


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,411,252
Number of Sequences: 219361
Number of extensions: 665290
Number of successful extensions: 1710
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)