Clone Information

BLAST Search Result

Clone Name	rbaal39b23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CD48A_ARATH (P54609) Cell division control protein 48 homolog A ...	129	5e-41
2	CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ...	126	6e-41
3	CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog	119	8e-41
4	CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h...	123	2e-40
5	CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val...	120	2e-40
6	TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER...	102	2e-30
7	TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER...	102	2e-30
8	TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T...	102	2e-30
9	TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T...	102	2e-30
10	TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h...	94	8e-30
11	TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T...	100	1e-29
12	TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h...	94	1e-28
13	CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48	62	1e-16
14	CDC48_YEAST (P25694) Cell division control protein 48	63	3e-16
15	CDAT_PLAF7 (P46468) Putative cell division cycle ATPase	38	1e-09
16	CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ...	35	3e-06
17	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	36	3e-06
18	PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso...	31	2e-04
19	PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso...	29	2e-04
20	Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156	28	0.001
21	KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3...	31	0.005
22	PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso...	27	0.008
23	PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso...	27	0.008
24	PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso...	31	0.027
25	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	32	0.044
26	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	32	0.057
27	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	32	0.057
28	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	32	0.057
29	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	32	0.057
30	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	32	0.057
31	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	31	0.073
32	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	30	0.12
33	PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso...	27	0.16
34	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	29	0.20
35	PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso...	28	0.34
36	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	30	0.43
37	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	30	0.44
38	KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like ...	30	0.72
39	KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-lik...	30	0.72
40	KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-lik...	30	0.92
41	PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote...	27	0.94
42	PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote...	27	0.94
43	PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote...	27	0.94
44	PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteaso...	27	1.6
45	PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S prote...	24	1.7
46	PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S prote...	24	1.7
47	UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (E...	32	1.8
48	KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ...	28	2.5
49	KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E...	28	2.5
50	KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E...	28	2.5
51	VAT_THEAC (O05209) VCP-like ATPase	25	3.1
52	PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S prote...	25	3.3
53	PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S prote...	25	3.3
54	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	26	3.3
55	PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso...	27	3.3
56	PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteaso...	27	3.3
57	KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3...	28	4.1
58	PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso...	27	4.2
59	AFG2_YEAST (P32794) Protein AFG2	26	5.1
60	KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3...	27	5.3
61	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	26	6.6
62	CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)	30	6.9
63	PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S1...	25	6.9
64	PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B	25	8.9
65	PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 prot...	23	8.9
66	PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)	23	8.9
67	PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 prot...	23	8.9
68	PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 prot...	23	8.9
69	CAPU_DROME (Q24120) Protein cappuccino	29	9.0

>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score =  129 bits (325), Expect(3) = 5e-41
 Identities = 70/100 (70%), Positives = 71/100 (71%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAA 292
           L KYTQGFSGADITEICQRACKYAI                NP            EI+AA
Sbjct: 679 LAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAA 738

Query: 291 HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 172
           HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 739 HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 778



 Score = 45.1 bits (105), Expect(3) = 5e-41
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           D DSR  IFKA LRKSP+AKD+D+ ALAK
Sbjct: 653 DEDSRLNIFKAALRKSPIAKDVDIGALAK 681



 Score = 33.5 bits (75), Expect(3) = 5e-41
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIYIPLP
Sbjct: 639 RPGRLDQLIYIPLP 652

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>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
           (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score =  126 bits (316), Expect(3) = 6e-41
 Identities = 70/101 (69%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE-IRA 295
           L KYTQGFSGADITEICQRACKYAI                NP              IRA
Sbjct: 678 LAKYTQGFSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRA 737

Query: 294 AHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 172
           AHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 738 AHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 778



 Score = 48.1 bits (113), Expect(3) = 6e-41
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           D DSR  IFKACLRKSP+AKD+D++ALAK
Sbjct: 652 DEDSRLNIFKACLRKSPVAKDVDVTALAK 680



 Score = 33.5 bits (75), Expect(3) = 6e-41
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIYIPLP
Sbjct: 638 RPGRLDQLIYIPLP 651

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>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score =  119 bits (297), Expect(3) = 8e-41
 Identities = 65/100 (65%), Positives = 69/100 (69%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAA 292
           L K+TQGFSGAD+TEICQRACKYAI                NP             I+ A
Sbjct: 679 LAKHTQGFSGADVTEICQRACKYAIRENIEKDIEREKRRQENPDSMDEDVDEVPE-IKPA 737

Query: 291 HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 172
           HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFG+EFRF
Sbjct: 738 HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRF 777



 Score = 55.1 bits (131), Expect(3) = 8e-41
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           D DSRHQIFKACLRKSPL+KDIDL ALAK
Sbjct: 653 DEDSRHQIFKACLRKSPLSKDIDLRALAK 681



 Score = 33.5 bits (75), Expect(3) = 8e-41
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIYIPLP
Sbjct: 639 RPGRLDQLIYIPLP 652

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>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
           (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score =  123 bits (308), Expect(3) = 2e-40
 Identities = 66/100 (66%), Positives = 69/100 (69%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAA 292
           L KYTQGFSGADITEICQR+CKYAI                +P             I+A 
Sbjct: 679 LAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEEDEEEIAE-IKAG 737

Query: 291 HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 172
           HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 738 HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 777



 Score = 49.7 bits (117), Expect(3) = 2e-40
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           D +SR+QIFK+CLRKSP+AKD+DL ALAK
Sbjct: 653 DEESRYQIFKSCLRKSPVAKDVDLRALAK 681



 Score = 33.5 bits (75), Expect(3) = 2e-40
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIYIPLP
Sbjct: 639 RPGRLDQLIYIPLP 652

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>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
           protein homolog) (VCP)
          Length = 807

 Score =  120 bits (302), Expect(3) = 2e-40
 Identities = 66/101 (65%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE-IRA 295
           L ++TQGFSGADITEICQRACKYAI                NP              I+A
Sbjct: 679 LARHTQGFSGADITEICQRACKYAIRENIEKDIERERKSRENPEAMDEDTVDDEVAEIKA 738

Query: 294 AHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 172
           AHFEESMK+ARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 739 AHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 779



 Score = 52.0 bits (123), Expect(3) = 2e-40
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           D DSRHQIFKACLRKSP+AK++DL ALA+
Sbjct: 653 DEDSRHQIFKACLRKSPIAKNVDLRALAR 681



 Score = 33.5 bits (75), Expect(3) = 2e-40
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIYIPLP
Sbjct: 639 RPGRLDQLIYIPLP 652

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>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  102 bits (253), Expect(3) = 2e-30
 Identities = 58/100 (58%), Positives = 63/100 (63%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAA 292
           L K T GFSGAD+TEICQRACK AI                NP            EIR  
Sbjct: 674 LAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRD 733

Query: 291 HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 172
           HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 734 HFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 772



 Score = 37.0 bits (84), Expect(3) = 2e-30
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKV 461
           D  SR  I KA LRKSP+AKD+DL  LAK+
Sbjct: 648 DEKSRVAILKANLRKSPVAKDVDLEFLAKM 677



 Score = 33.5 bits (75), Expect(3) = 2e-30
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIYIPLP
Sbjct: 634 RPGRLDQLIYIPLP 647

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>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  102 bits (253), Expect(3) = 2e-30
 Identities = 58/100 (58%), Positives = 63/100 (63%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAA 292
           L K T GFSGAD+TEICQRACK AI                NP            EIR  
Sbjct: 674 LAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRD 733

Query: 291 HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 172
           HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 734 HFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 772



 Score = 37.0 bits (84), Expect(3) = 2e-30
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKV 461
           D  SR  I KA LRKSP+AKD+DL  LAK+
Sbjct: 648 DEKSRVAILKANLRKSPVAKDVDLEFLAKM 677



 Score = 33.5 bits (75), Expect(3) = 2e-30
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIYIPLP
Sbjct: 634 RPGRLDQLIYIPLP 647

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>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  102 bits (253), Expect(3) = 2e-30
 Identities = 58/100 (58%), Positives = 63/100 (63%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAA 292
           L K T GFSGAD+TEICQRACK AI                NP            EIR  
Sbjct: 674 LAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRD 733

Query: 291 HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 172
           HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 734 HFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 772



 Score = 37.0 bits (84), Expect(3) = 2e-30
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKV 461
           D  SR  I KA LRKSP+AKD+DL  LAK+
Sbjct: 648 DEKSRVAILKANLRKSPVAKDVDLEFLAKM 677



 Score = 33.5 bits (75), Expect(3) = 2e-30
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIYIPLP
Sbjct: 634 RPGRLDQLIYIPLP 647

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>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  102 bits (253), Expect(3) = 2e-30
 Identities = 58/100 (58%), Positives = 63/100 (63%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAA 292
           L K T GFSGAD+TEICQRACK AI                NP            EIR  
Sbjct: 674 LAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRD 733

Query: 291 HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 172
           HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 734 HFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 772



 Score = 37.0 bits (84), Expect(3) = 2e-30
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKV 461
           D  SR  I KA LRKSP+AKD+DL  LAK+
Sbjct: 648 DEKSRVAILKANLRKSPVAKDVDLEFLAKM 677



 Score = 33.5 bits (75), Expect(3) = 2e-30
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIYIPLP
Sbjct: 634 RPGRLDQLIYIPLP 647

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>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
           (p97/CDC48 homolog 1)
          Length = 809

 Score = 94.4 bits (233), Expect(3) = 8e-30
 Identities = 53/104 (50%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE---- 304
           L K T GFSGAD+TEICQRACK AI                              +    
Sbjct: 682 LAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPE 741

Query: 303 IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 172
           I  AHFEE+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+F
Sbjct: 742 ITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKF 785



 Score = 42.4 bits (98), Expect(3) = 8e-30
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           D  SRHQI KA LRK+PL+KD+DL+ LAK
Sbjct: 656 DEASRHQILKASLRKTPLSKDLDLTFLAK 684



 Score = 33.5 bits (75), Expect(3) = 8e-30
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIYIPLP
Sbjct: 642 RPGRLDQLIYIPLP 655

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>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score =  100 bits (248), Expect(3) = 1e-29
 Identities = 58/100 (58%), Positives = 62/100 (62%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAA 292
           L K T GFSGAD+TEICQRACK AI                NP            EIR  
Sbjct: 675 LAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRD 734

Query: 291 HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 172
           HFEE+M+ ARRSVSD DIRKY+ FAQTLQQSRGFGS FRF
Sbjct: 735 HFEEAMRLARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRF 773



 Score = 36.2 bits (82), Expect(3) = 1e-29
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKV 461
           D  SR  I KA LRKSP+AKD+D+  LAK+
Sbjct: 649 DEKSRMAILKANLRKSPVAKDVDVDFLAKM 678



 Score = 33.5 bits (75), Expect(3) = 1e-29
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIYIPLP
Sbjct: 635 RPGRLDQLIYIPLP 648

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>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
           (p97/CDC48 homolog 2)
          Length = 810

 Score = 94.4 bits (233), Expect(3) = 1e-28
 Identities = 53/104 (50%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE---- 304
           L K T GFSGAD+TEICQRACK AI                              +    
Sbjct: 680 LAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPE 739

Query: 303 IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 172
           I  AHFEE+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+F
Sbjct: 740 ITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKF 783



 Score = 38.1 bits (87), Expect(3) = 1e-28
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           D  SR QIFKA LRK+PL+ D+DL+ LAK
Sbjct: 654 DEASRLQIFKASLRKTPLSADLDLNFLAK 682



 Score = 33.5 bits (75), Expect(3) = 1e-28
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIYIPLP
Sbjct: 640 RPGRLDQLIYIPLP 653

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>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score = 61.6 bits (148), Expect(3) = 1e-16
 Identities = 36/92 (39%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
 Frame = -1

Query: 465 KYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE-IRAAH 289
           K T GFSGAD+  + QRA K AI                 P              ++  H
Sbjct: 696 KATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDVVMDEDASVSQVQRHH 755

Query: 288 FEESMKYARRSVSDADIRKYQAFAQTLQQSRG 193
            EE+MK ARRSVSDA++R+Y+A+A  L  SRG
Sbjct: 756 VEEAMKMARRSVSDAEVRRYEAYAHQLLTSRG 787



 Score = 33.1 bits (74), Expect(3) = 1e-16
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIY+PLP
Sbjct: 654 RPGRLDQLIYVPLP 667



 Score = 30.4 bits (67), Expect(3) = 1e-16
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           D ++R  I +  LR +P+A+D+DL A+AK
Sbjct: 668 DEEARFSILQTQLRHTPVAEDVDLRAVAK 696

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>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score = 63.2 bits (152), Expect(3) = 3e-16
 Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
 Frame = -1

Query: 471  LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE---- 304
            + K TQGFSGAD+  I QRA KYAI                              +    
Sbjct: 685  IAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQE 744

Query: 303  --------IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 172
                    I   HF E+MK A+RSVSDA++R+Y+A++Q ++ SRG  S F F
Sbjct: 745  PEVDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKASRGQFSNFNF 796



 Score = 33.1 bits (74), Expect(3) = 3e-16
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLDQLIY+PLP
Sbjct: 645 RPGRLDQLIYVPLP 658



 Score = 27.7 bits (60), Expect(3) = 3e-16
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           D ++R  I  A LRK+PL   ++L+A+AK
Sbjct: 659 DENARLSILNAQLRKTPLEPGLELTAIAK 687

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>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase|
          Length = 1229

 Score = 38.1 bits (87), Expect(3) = 1e-09
 Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
 Frame = -1

Query: 471  LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXX----- 307
            + K T+GFSGADIT +CQ A   AI                                   
Sbjct: 1130 MAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKIDDTDTYDP 1189

Query: 306  --EIRAAHFEESMKYARRSVSDADIRKYQAFAQTL 208
               +   HF+ + K AR S+   D+ KY+ F + L
Sbjct: 1190 VPTLSKKHFDLAFKNARISIQPEDVLKYEKFKEKL 1224



 Score = 34.3 bits (77), Expect(3) = 1e-09
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = -3

Query: 550  DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
            D+ SR+ IFKA L+ +PL +D+D+  +AK
Sbjct: 1104 DLKSRYSIFKAILKNTPLNEDVDIHDMAK 1132



 Score = 28.9 bits (63), Expect(3) = 1e-09
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -2

Query: 593  RPGRLDQLIYIPLP 552
            RPGRLD+LIYI LP
Sbjct: 1090 RPGRLDKLIYISLP 1103

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>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score = 34.7 bits (78), Expect(3) = 3e-06
 Identities = 23/92 (25%), Positives = 37/92 (40%)
 Frame = -1

Query: 456 QGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEES 277
           +GFSGAD+  + Q+A   A+                +              I+  HFE++
Sbjct: 728 EGFSGADLAHLVQKATFQAV----------EEMIGSSESSEDDVTDITQCTIKTRHFEQA 777

Query: 276 MKYARRSVSDADIRKYQAFAQTLQQSRGFGSE 181
           +     SV+    R Y A +  LQ+S G  +E
Sbjct: 778 LSLVSPSVNKQQRRHYDALSTKLQESVGRNTE 809



 Score = 28.1 bits (61), Expect(3) = 3e-06
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           + D R  I KA  RK P+   +DL  +AK
Sbjct: 696 NADERASILKAIARKKPIDPSVDLDGIAK 724



 Score = 26.2 bits (56), Expect(3) = 3e-06
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR   L+Y+PLP
Sbjct: 682 RPGRFGNLLYVPLP 695

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>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score = 36.2 bits (82), Expect(3) = 3e-06
 Identities = 23/82 (28%), Positives = 34/82 (41%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAA 292
           L + T+G+SGADI  +C+ A   AI                               I   
Sbjct: 651 LAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKLK----------ITKK 700

Query: 291 HFEESMKYARRSVSDADIRKYQ 226
           HFEE++K  R S++  D+ KY+
Sbjct: 701 HFEEALKKVRPSLTKEDVEKYE 722



 Score = 29.6 bits (65), Expect(2) = 0.034
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKV 461
           D + R +I +   RK PLA+D+DL  LA++
Sbjct: 351 DKEGRKEILEIHTRKMPLAEDVDLEELAEL 380



 Score = 27.7 bits (60), Expect(3) = 3e-06
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           D  +R +IFK  LR  PLA D+++  LA+
Sbjct: 625 DKKARVEIFKIHLRGKPLADDVNIEELAE 653



 Score = 26.6 bits (57), Expect(2) = 0.034
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAI 397
           L + T GF GAD+  +C+ A  +A+
Sbjct: 377 LAELTNGFVGADLEALCKEAAMHAL 401



 Score = 25.0 bits (53), Expect(3) = 3e-06
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRL++ IYIP P
Sbjct: 611 RPGRLERHIYIPPP 624

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>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score = 31.2 bits (69), Expect(3) = 2e-04
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKV 461
           D + R++IFK   R   LA+D+DL  LAK+
Sbjct: 351 DEEGRYEIFKIHTRDMNLAEDVDLQKLAKI 380



 Score = 27.3 bits (59), Expect(3) = 2e-04
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAI 397
           L K T+G SGADI  IC  A   AI
Sbjct: 377 LAKITEGASGADIKAICTEAGMMAI 401



 Score = 24.3 bits (51), Expect(3) = 2e-04
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D+ I IPLP
Sbjct: 337 RPGRFDRHIKIPLP 350

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>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score = 28.9 bits (63), Expect(3) = 2e-04
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 544 DSRHQIFKACLRKSPLAKDIDLSALAKV 461
           + R QIFK   RK  LA+D+D   LA++
Sbjct: 315 EGRIQIFKIHTRKMKLAEDVDFKELARI 342



 Score = 27.7 bits (60), Expect(3) = 2e-04
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAI 397
           L + T+G SGADI  IC  A  +AI
Sbjct: 339 LARITEGASGADIKAICTEAGMFAI 363



 Score = 25.8 bits (55), Expect(3) = 2e-04
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D++I +PLP
Sbjct: 299 RPGRFDRIIEVPLP 312

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>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score = 28.5 bits (62), Expect(3) = 0.001
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAI 397
           L K T+G++GADI  +C+ A   A+
Sbjct: 648 LAKKTEGYTGADIEALCREAAMLAV 672



 Score = 27.3 bits (59), Expect(2) = 0.53
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKV 461
           D + R +I +   R  PLA+D+DL  LA V
Sbjct: 348 DREGRKEILQIHTRNMPLAEDVDLDYLADV 377



 Score = 26.2 bits (56), Expect(3) = 0.001
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD++I +P+P
Sbjct: 608 RPGRLDRVILVPVP 621



 Score = 25.0 bits (53), Expect(3) = 0.001
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           D  +R  IFK   R   LA+D++L  LAK
Sbjct: 622 DEKARLDIFKIHTRSMNLAEDVNLEELAK 650



 Score = 24.6 bits (52), Expect(2) = 0.53
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAI 397
           L   T GF GAD+  +C+ A   A+
Sbjct: 374 LADVTHGFVGADLAALCKEAAMRAL 398

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>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score = 30.8 bits (68), Expect(3) = 0.005
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           ++D R Q+ +  L++ PLA DIDL ++A+
Sbjct: 408 EIDGREQLLRINLKEVPLADDIDLKSIAE 436



 Score = 25.8 bits (55), Expect(3) = 0.005
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 453 GFSGADITEICQRACKYAI 397
           G+SGADIT +C+ A   A+
Sbjct: 440 GYSGADITNVCRDASMMAM 458



 Score = 21.2 bits (43), Expect(3) = 0.005
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 584 RLDQLIYIPLP 552
           RL++ IYIPLP
Sbjct: 397 RLEKRIYIPLP 407

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>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score = 26.9 bits (58), Expect(3) = 0.008
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D+L+++P+P
Sbjct: 317 RPGRFDRLVHVPMP 330



 Score = 25.0 bits (53), Expect(3) = 0.008
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAI 397
           L K T+G SGAD+  I   A  +A+
Sbjct: 357 LAKVTEGMSGADLKAIATEAGMFAV 381



 Score = 25.0 bits (53), Expect(3) = 0.008
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 547 VDSRHQIFKACLRKSPLAKDIDLSALAKV 461
           +++R +I K    K  LA DID   LAKV
Sbjct: 332 IEARGKILKIHCGKMTLAGDIDFKKLAKV 360

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>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score = 26.9 bits (58), Expect(3) = 0.008
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D+L+++P+P
Sbjct: 317 RPGRFDRLVHVPMP 330



 Score = 25.4 bits (54), Expect(3) = 0.008
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 547 VDSRHQIFKACLRKSPLAKDIDLSALAK 464
           +++R +I K    K  LA+DID   LAK
Sbjct: 332 IEARGKILKIHCEKMTLAEDIDFKKLAK 359



 Score = 24.6 bits (52), Expect(3) = 0.008
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAI 397
           L K T+G SGAD+  I   A  +A+
Sbjct: 357 LAKATEGMSGADLKAIATEAGMFAV 381

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>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score = 30.8 bits (68), Expect(2) = 0.027
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           LL + T+GFSGADI  +C  A   AI
Sbjct: 331 LLSQLTEGFSGADIKNVCVEAAYMAI 356



 Score = 25.8 bits (55), Expect(2) = 0.027
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D++I +PLP
Sbjct: 292 RPGRFDRIIEVPLP 305

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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 31.6 bits (70), Expect(2) = 0.044
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           D+  R QI K  +RK PL+KD+D   +A+  P
Sbjct: 323 DIRGREQILKVHMRKVPLSKDVDPMIIARGTP 354



 Score = 24.3 bits (51), Expect(2) = 0.044
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 477 VLLPKYTQGFSGADITEICQRACKYA 400
           +++ + T GFSGAD+  +   A  +A
Sbjct: 347 MIIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 31.6 bits (70), Expect(2) = 0.057
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           DV  R QI K  +R+ PLA DID + +A+  P
Sbjct: 323 DVRGREQILKVHMRRVPLAPDIDAAIIARGTP 354



 Score = 23.9 bits (50), Expect(2) = 0.057
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYA 400
           ++ + T GFSGAD+  +   A  +A
Sbjct: 348 IIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 31.6 bits (70), Expect(2) = 0.057
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           DV  R QI K  +R+ PLA DID + +A+  P
Sbjct: 323 DVRGREQILKVHMRRVPLATDIDAAIIARGTP 354



 Score = 23.9 bits (50), Expect(2) = 0.057
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYA 400
           ++ + T GFSGAD+  +   A  +A
Sbjct: 348 IIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 31.6 bits (70), Expect(2) = 0.057
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           DV  R QI K  +R+ PLA DID + +A+  P
Sbjct: 323 DVRGREQILKVHMRRVPLATDIDAAIIARGTP 354



 Score = 23.9 bits (50), Expect(2) = 0.057
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYA 400
           ++ + T GFSGAD+  +   A  +A
Sbjct: 348 IIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 31.6 bits (70), Expect(2) = 0.057
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           DV  R QI K  +R+ PLA DID + +A+  P
Sbjct: 323 DVRGREQILKVHMRRVPLAPDIDAAIIARGTP 354



 Score = 23.9 bits (50), Expect(2) = 0.057
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYA 400
           ++ + T GFSGAD+  +   A  +A
Sbjct: 348 IIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 31.6 bits (70), Expect(2) = 0.057
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           DV  R QI K  +R+ PLA DID + +A+  P
Sbjct: 323 DVRGREQILKVHMRRVPLAPDIDAAIIARGTP 354



 Score = 23.9 bits (50), Expect(2) = 0.057
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYA 400
           ++ + T GFSGAD+  +   A  +A
Sbjct: 348 IIARGTPGFSGADLANLVNEAALFA 372

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>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 30.8 bits (68), Expect(2) = 0.073
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           DV  R++I K   R   LAKD+DL  +A+  P
Sbjct: 327 DVRGRYEILKVHARNKKLAKDVDLEFVARATP 358



 Score = 24.3 bits (51), Expect(2) = 0.073
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D+ I+IP P
Sbjct: 313 RPGRFDRQIFIPKP 326

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>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 30.0 bits (66), Expect(2) = 0.12
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           DV  R QI K  +RK PL++D+D   +A+  P
Sbjct: 323 DVRGRKQILKVHMRKVPLSEDVDPMIIARGTP 354



 Score = 24.3 bits (51), Expect(2) = 0.12
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 477 VLLPKYTQGFSGADITEICQRACKYA 400
           +++ + T GFSGAD+  +   A  +A
Sbjct: 347 MIIARGTPGFSGADLANLVNEAALFA 372

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>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 392

 Score = 27.3 bits (59), Expect(2) = 0.16
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           +L   T+GFSGA+I  +C  A   AI
Sbjct: 331 ILASMTEGFSGAEIKNVCTEAGYIAI 356



 Score = 26.6 bits (57), Expect(2) = 0.16
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D+LI +PLP
Sbjct: 292 RPGRFDRLIEVPLP 305

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>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 29.3 bits (64), Expect(2) = 0.20
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYA 400
           L + T GFSGADI  IC  A  +A
Sbjct: 509 LAELTPGFSGADIANICNEAALHA 532



 Score = 24.3 bits (51), Expect(2) = 0.20
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD+ ++I LP
Sbjct: 467 RPGRLDRHVFIDLP 480

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>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score = 27.7 bits (60), Expect(2) = 0.34
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           LL + T G SGAD+  IC  A  +AI
Sbjct: 348 LLARITDGASGADLKAICTEAGMFAI 373



 Score = 25.0 bits (53), Expect(2) = 0.34
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D+ I +PLP
Sbjct: 309 RPGRFDRFIEVPLP 322

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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 29.6 bits (65), Expect(2) = 0.43
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           DV  R QI K  +RK  +A+D+D   LA+  P
Sbjct: 322 DVKGREQILKVHMRKVSVAQDVDAMTLARGTP 353



 Score = 22.7 bits (47), Expect(2) = 0.43
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYA 400
           L + T G+SGAD+  +   A  +A
Sbjct: 348 LARGTPGYSGADLANLVNEAALFA 371

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>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 29.6 bits (65), Expect(2) = 0.44
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           DV  R QI K  +RK  +A+D+D   LA+  P
Sbjct: 68  DVKGREQILKVHMRKVSVAQDVDAMTLARGTP 99



 Score = 22.7 bits (47), Expect(2) = 0.44
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYA 400
           L + T G+SGAD+  +   A  +A
Sbjct: 94  LARGTPGYSGADLANLVNEAALFA 117

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>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 29.6 bits (65), Expect(2) = 0.72
 Identities = 21/78 (26%), Positives = 31/78 (39%)
 Frame = -1

Query: 459 TQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEE 280
           T+G+SGADIT IC+ A   A+                               +     E 
Sbjct: 410 TEGYSGADITNICRDASLMAM--------RRRINGLSPEEIRALSKEELQMPVTRGDLEL 461

Query: 279 SMKYARRSVSDADIRKYQ 226
           ++K   +SVS AD+ KY+
Sbjct: 462 ALKKIAKSVSAADLEKYE 479



 Score = 21.9 bits (45), Expect(2) = 0.72
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 584 RLDQLIYIPLP*CRFEAPDLQSLPQEV 504
           RL++ IYIPLP  +  A  L+   +EV
Sbjct: 369 RLEKRIYIPLPTAKGRAELLKISLREV 395

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>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 29.6 bits (65), Expect(2) = 0.72
 Identities = 21/78 (26%), Positives = 31/78 (39%)
 Frame = -1

Query: 459 TQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEE 280
           T+G+SGADIT IC+ A   A+                               +     E 
Sbjct: 410 TEGYSGADITNICRDASLMAM--------RRRINGLSPEEIRALSKEELQMPVTRGDLEL 461

Query: 279 SMKYARRSVSDADIRKYQ 226
           ++K   +SVS AD+ KY+
Sbjct: 462 ALKKIAKSVSAADLEKYE 479



 Score = 21.9 bits (45), Expect(2) = 0.72
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 584 RLDQLIYIPLP*CRFEAPDLQSLPQEV 504
           RL++ IYIPLP  +  A  L+   +EV
Sbjct: 369 RLEKRIYIPLPTAKGRAELLKISLREV 395

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>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 490

 Score = 29.6 bits (65), Expect(2) = 0.92
 Identities = 20/77 (25%), Positives = 31/77 (40%)
 Frame = -1

Query: 456 QGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEES 277
           +G+SGADIT +C+ A   A+                               +    FE +
Sbjct: 413 EGYSGADITNVCRDASLMAM--------RRRINGLSPEEIRALSKEELQMPVTKGDFELA 464

Query: 276 MKYARRSVSDADIRKYQ 226
           +K   +SVS AD+ KY+
Sbjct: 465 LKKIAKSVSAADLEKYE 481



 Score = 21.6 bits (44), Expect(2) = 0.92
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 584 RLDQLIYIPLP*CRFEAPDLQSLPQEV 504
           RL++ IYIPLP  +  A  L+   +EV
Sbjct: 371 RLEKRIYIPLPTAKGRAELLKINLREV 397

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>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 26.6 bits (57), Expect(2) = 0.94
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 465 KYTQGFSGADITEICQRACKYAI 397
           K + GF+GAD+  +C  A  +AI
Sbjct: 333 KLSDGFNGADLRNVCTEAGMFAI 355



 Score = 24.6 bits (52), Expect(2) = 0.94
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD+ I+I LP
Sbjct: 291 RPGRLDRKIHIDLP 304

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>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 26.6 bits (57), Expect(2) = 0.94
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 465 KYTQGFSGADITEICQRACKYAI 397
           K + GF+GAD+  +C  A  +AI
Sbjct: 333 KLSDGFNGADLRNVCTEAGMFAI 355



 Score = 24.6 bits (52), Expect(2) = 0.94
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD+ I+I LP
Sbjct: 291 RPGRLDRKIHIDLP 304

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>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 26.6 bits (57), Expect(2) = 0.94
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 465 KYTQGFSGADITEICQRACKYAI 397
           K + GF+GAD+  +C  A  +AI
Sbjct: 333 KLSDGFNGADLRNVCTEAGMFAI 355



 Score = 24.6 bits (52), Expect(2) = 0.94
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD+ I+I LP
Sbjct: 291 RPGRLDRKIHIDLP 304

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>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 396

 Score = 26.6 bits (57), Expect(2) = 1.6
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D+LI +PLP
Sbjct: 295 RPGRFDRLIEVPLP 308



 Score = 23.9 bits (50), Expect(2) = 1.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           L+ + T+G SGAD+  I   A  +AI
Sbjct: 333 LIAELTEGASGADLKAIATEAGMFAI 358

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>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 23.9 bits (50), Expect(3) = 1.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           LL +     +GADI  +C  A  YAI
Sbjct: 365 LLARLCPNSTGADIRSVCTEAGMYAI 390



 Score = 23.9 bits (50), Expect(3) = 1.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           D++ R QIFK   R     +DI    LA++ P
Sbjct: 340 DLEGRTQIFKIHTRTMNCERDIRFELLARLCP 371



 Score = 20.8 bits (42), Expect(3) = 1.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD+ +   LP
Sbjct: 326 RPGRLDRKVEFGLP 339

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>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 23.9 bits (50), Expect(3) = 1.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           LL +     +GADI  +C  A  YAI
Sbjct: 365 LLARLCPNSTGADIRSVCTEAGMYAI 390



 Score = 23.9 bits (50), Expect(3) = 1.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           D++ R QIFK   R     +DI    LA++ P
Sbjct: 340 DLEGRTQIFKIHTRTMNCERDIRFELLARLCP 371



 Score = 20.8 bits (42), Expect(3) = 1.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD+ +   LP
Sbjct: 326 RPGRLDRKVEFGLP 339

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>UBP42_HUMAN (Q9H9J4) Ubiquitin carboxyl-terminal hydrolase 42 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 42)
            (Ubiquitin-specific-processing protease 42)
            (Deubiquitinating enzyme 42)
          Length = 1325

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 183  RSRIHETAAASGQRPGTCGCRRHSHYDAHTSSTPRSGQP*SLQPHQPR 326
            R+ +HE       R G  GC      + H  S+PR+G P +L PH  R
Sbjct: 1085 RAGLHERPHKDHNR-GRRGCEPARERERHRPSSPRAGAPHALAPHPDR 1131

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>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 28.5 bits (62), Expect(2) = 2.5
 Identities = 20/77 (25%), Positives = 30/77 (38%)
 Frame = -1

Query: 456 QGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEES 277
           +G+SGADIT +C+ A   A+                                    FE +
Sbjct: 414 EGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMHMPTT--------MEDFEMA 465

Query: 276 MKYARRSVSDADIRKYQ 226
           +K   +SVS ADI +Y+
Sbjct: 466 LKKVSKSVSAADIERYE 482



 Score = 21.2 bits (43), Expect(2) = 2.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 584 RLDQLIYIPLP 552
           RL++ IYIPLP
Sbjct: 372 RLEKRIYIPLP 382

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>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score = 28.5 bits (62), Expect(2) = 2.5
 Identities = 20/77 (25%), Positives = 30/77 (38%)
 Frame = -1

Query: 456 QGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEES 277
           +G+SGADIT +C+ A   A+                                    FE +
Sbjct: 414 EGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREAMHMPTT--------MEDFEMA 465

Query: 276 MKYARRSVSDADIRKYQ 226
           +K   +SVS ADI +Y+
Sbjct: 466 LKKISKSVSAADIERYE 482



 Score = 21.2 bits (43), Expect(2) = 2.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 584 RLDQLIYIPLP 552
           RL++ IYIPLP
Sbjct: 372 RLEKRIYIPLP 382

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>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 28.5 bits (62), Expect(2) = 2.5
 Identities = 20/77 (25%), Positives = 30/77 (38%)
 Frame = -1

Query: 456 QGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEES 277
           +G+SGADIT +C+ A   A+                                    FE +
Sbjct: 414 EGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTT--------MEDFEMA 465

Query: 276 MKYARRSVSDADIRKYQ 226
           +K   +SVS ADI +Y+
Sbjct: 466 LKKVSKSVSAADIERYE 482



 Score = 21.2 bits (43), Expect(2) = 2.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 584 RLDQLIYIPLP 552
           RL++ IYIPLP
Sbjct: 372 RLEKRIYIPLP 382

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>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score = 25.4 bits (54), Expect(2) = 3.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAK 464
           D ++R  I K   +  PLA D+DL+ +A+
Sbjct: 637 DKEARLSILKVHTKNMPLAPDVDLNDIAQ 665



 Score = 23.9 bits (50), Expect(2) = 3.1
 Identities = 17/87 (19%), Positives = 34/87 (39%)
 Frame = -1

Query: 459 TQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEE 280
           T+G+ GAD+  +C+ A   A                                +   +F +
Sbjct: 667 TEGYVGADLENLCREAGMNA-----------------------YRENPDATSVSQKNFLD 703

Query: 279 SMKYARRSVSDADIRKYQAFAQTLQQS 199
           ++K  R SV +  I+ Y+  ++T+ +S
Sbjct: 704 ALKTIRPSVDEEVIKFYRTLSETMSKS 730

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>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory
           particle triple-A ATPase subunit 1a)
          Length = 426

 Score = 25.4 bits (54), Expect(2) = 3.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           D++SR QIFK   R     +DI    LA++ P
Sbjct: 340 DLESRTQIFKIHTRTMNCERDIRFELLARLCP 371



 Score = 23.9 bits (50), Expect(2) = 3.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           LL +     +GADI  +C  A  YAI
Sbjct: 365 LLARLCPNSTGADIRSVCTEAGMYAI 390

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>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 425

 Score = 25.4 bits (54), Expect(2) = 3.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           D++SR QIFK   R     +DI    LA++ P
Sbjct: 339 DLESRTQIFKIHTRTMNCERDIRFELLARLCP 370



 Score = 23.9 bits (50), Expect(2) = 3.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           LL +     +GADI  +C  A  YAI
Sbjct: 364 LLARLCPNSTGADIRSVCTEAGMYAI 389

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>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score = 25.8 bits (55), Expect(2) = 3.3
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D++I +PLP
Sbjct: 297 RPGRFDRIIEVPLP 310



 Score = 23.5 bits (49), Expect(2) = 3.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAI 397
           + K T+GFSGAD+  +   A   AI
Sbjct: 337 IAKLTEGFSGADLKAVVVEAGYNAI 361

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>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 26.6 bits (57), Expect(2) = 3.3
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D+LI +PLP
Sbjct: 298 RPGRFDRLIEVPLP 311



 Score = 22.7 bits (47), Expect(2) = 3.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           ++ + T+G SGAD+  I   A  +AI
Sbjct: 336 VIAEITEGASGADLKAIATEAGMFAI 361

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>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 397

 Score = 26.6 bits (57), Expect(2) = 3.3
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D+LI +PLP
Sbjct: 296 RPGRFDRLIEVPLP 309



 Score = 22.7 bits (47), Expect(2) = 3.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           ++ + T+G SGAD+  I   A  +AI
Sbjct: 334 VIAEITEGASGADLKAIATEAGMFAI 359

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>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Fragment)
          Length = 486

 Score = 27.7 bits (60), Expect(2) = 4.1
 Identities = 20/76 (26%), Positives = 29/76 (38%)
 Frame = -1

Query: 453 GFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEESM 274
           G+SGADIT +C+ A   A+                                    FE ++
Sbjct: 412 GYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRDDMHMPTT--------MEDFEMAL 463

Query: 273 KYARRSVSDADIRKYQ 226
           K   +SVS +DI KY+
Sbjct: 464 KKVSKSVSASDIEKYE 479



 Score = 21.2 bits (43), Expect(2) = 4.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 584 RLDQLIYIPLP 552
           RL++ IYIPLP
Sbjct: 369 RLEKRIYIPLP 379

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>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 26.6 bits (57), Expect(2) = 4.2
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D+LI +PLP
Sbjct: 298 RPGRFDRLIEVPLP 311



 Score = 22.3 bits (46), Expect(2) = 4.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYAI 397
           + + T+G SGAD+  I   A  +AI
Sbjct: 337 IAEMTEGASGADLKAIATEAGMFAI 361

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>AFG2_YEAST (P32794) Protein AFG2|
          Length = 780

 Score = 25.8 bits (55), Expect(2) = 5.1
 Identities = 18/81 (22%), Positives = 31/81 (38%)
 Frame = -1

Query: 459 TQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEE 280
           T+G+SGA++  +CQ A   AI                              ++   HFE+
Sbjct: 716 TEGYSGAEVVLLCQEAGLAAI-----------------------MEDLDVAKVELRHFEK 752

Query: 279 SMKYARRSVSDADIRKYQAFA 217
           + K   R ++   +  Y+ FA
Sbjct: 753 AFKGIARGITPEMLSYYEEFA 773



 Score = 22.7 bits (47), Expect(2) = 5.1
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD+ IY+  P
Sbjct: 671 RPGRLDRHIYVGPP 684

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>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 27.3 bits (59), Expect(2) = 5.3
 Identities = 17/78 (21%), Positives = 32/78 (41%)
 Frame = -1

Query: 459 TQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXEIRAAHFEE 280
           T+G+SG D+T +C+ A    +                +              +    FEE
Sbjct: 444 TEGYSGDDLTNVCRDASMNGM-------RRKIAGKTRDEIKNMSKDDISNDPVAMCDFEE 496

Query: 279 SMKYARRSVSDADIRKYQ 226
           +++  + SVS +DI K++
Sbjct: 497 AIRKVQPSVSSSDIEKHE 514



 Score = 21.2 bits (43), Expect(2) = 5.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 584 RLDQLIYIPLP 552
           RL++ IYIPLP
Sbjct: 403 RLEKRIYIPLP 413

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>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 26.2 bits (56), Expect(2) = 6.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 471 LPKYTQGFSGADITEICQRACKYA 400
           L   T GF+GADI+ +C  A   A
Sbjct: 375 LAALTPGFTGADISNVCNEAALIA 398



 Score = 21.9 bits (45), Expect(2) = 6.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGR D+ IYI  P
Sbjct: 331 RPGRFDRQIYIGPP 344

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>CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)|
          Length = 1096

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 19/47 (40%), Positives = 20/47 (42%)
 Frame = +3

Query: 207 AASGQRPGTCGCRRHSHYDAHTSSTPRSGQP*SLQPHQPRPPPSLQG 347
           AA G   G  G  RH H+ AH        QP    P  P PPP L G
Sbjct: 70  AALGAYSGGAGPTRH-HHPAHHFHHHGQAQPGLHPPLPPPPPPQLPG 115

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>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome|
           regulatory particle ATPase-like protein 4)
          Length = 406

 Score = 25.4 bits (54), Expect(2) = 6.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 465 KYTQGFSGADITEICQRACKYAI 397
           K + GFS AD+  +C  A  +AI
Sbjct: 350 KLSDGFSAADLRNVCTEAGMFAI 372



 Score = 22.7 bits (47), Expect(2) = 6.9
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD+ I I LP
Sbjct: 308 RPGRLDRKIEIGLP 321

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>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B|
          Length = 414

 Score = 24.6 bits (52), Expect(2) = 8.9
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD+ I  PLP
Sbjct: 319 RPGRLDRKIEFPLP 332



 Score = 23.1 bits (48), Expect(2) = 8.9
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 447 SGADITEICQRACKYAI 397
           SGADI  ICQ A   A+
Sbjct: 367 SGADINSICQEAGMQAV 383

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>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 433

 Score = 23.5 bits (49), Expect(3) = 8.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           D++ R  IFK   R   + +DI    LA++ P
Sbjct: 347 DLEGRTHIFKIHARSMSVERDIRFELLARLCP 378



 Score = 21.6 bits (44), Expect(3) = 8.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD+ I   LP
Sbjct: 333 RPGRLDRKIEFSLP 346



 Score = 20.8 bits (42), Expect(3) = 8.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           LL +     +GA+I  +C  A  +AI
Sbjct: 372 LLARLCPNSTGAEIRSVCTEAGMFAI 397

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>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 23.5 bits (49), Expect(3) = 8.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           D++ R  IFK   R   + +DI    LA++ P
Sbjct: 346 DLEGRTHIFKIHARSMSVERDIRFELLARLCP 377



 Score = 21.6 bits (44), Expect(3) = 8.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD+ I   LP
Sbjct: 332 RPGRLDRKIEFSLP 345



 Score = 20.8 bits (42), Expect(3) = 8.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           LL +     +GA+I  +C  A  +AI
Sbjct: 371 LLARLCPNSTGAEIRSVCTEAGMFAI 396

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>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 23.5 bits (49), Expect(3) = 8.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           D++ R  IFK   R   + +DI    LA++ P
Sbjct: 346 DLEGRTHIFKIHARSMSVERDIRFELLARLCP 377



 Score = 21.6 bits (44), Expect(3) = 8.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD+ I   LP
Sbjct: 332 RPGRLDRKIEFSLP 345



 Score = 20.8 bits (42), Expect(3) = 8.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           LL +     +GA+I  +C  A  +AI
Sbjct: 371 LLARLCPNSTGAEIRSVCTEAGMFAI 396

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>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 23.5 bits (49), Expect(3) = 8.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 550 DVDSRHQIFKACLRKSPLAKDIDLSALAKVHP 455
           D++ R  IFK   R   + +DI    LA++ P
Sbjct: 346 DLEGRTHIFKIHARSMSVERDIRFELLARLCP 377



 Score = 21.6 bits (44), Expect(3) = 8.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 593 RPGRLDQLIYIPLP 552
           RPGRLD+ I   LP
Sbjct: 332 RPGRLDRKIEFSLP 345



 Score = 20.8 bits (42), Expect(3) = 8.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 474 LLPKYTQGFSGADITEICQRACKYAI 397
           LL +     +GA+I  +C  A  +AI
Sbjct: 371 LLARLCPNSTGAEIRSVCTEAGMFAI 396

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>CAPU_DROME (Q24120) Protein cappuccino|
          Length = 1059

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +3

Query: 198 ETAAASGQRPGTCGCRRHSHYDAHTSSTPRSGQ-P*SLQPHQPRPPPSL 341
           ET   S    GTC C + S   +   S    G+ P ++ P  P PPP L
Sbjct: 446 ETQTESEDCEGTCKCGQSSTKVSDNESAKEDGEKPHAVAPPPPPPPPPL 494


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,961,045
Number of Sequences: 219361
Number of extensions: 961746
Number of successful extensions: 3225
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 2983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3211
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result