>VPX_SIVM1 (P05917) VPX protein (X ORF protein)|
          Length = 112

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = -2

Query: 551 LCNVKASALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSIA 414
           LC ++  AL M  +K CR L      G G GGW PG   PP P +A
Sbjct: 72  LCLIQ-KALFMHCKKGCRCLGE----GHGAGGWRPGPPPPPPPGLA 112

>BIOD_CHLPN (Q9Z6L7) Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin|
           synthase) (DTB synthetase) (DTBS)
          Length = 219

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 487 DDNVLHHFSGCMCKAEAFTLHKP 555
           D N++H  SG  C  EA+ LHKP
Sbjct: 43  DSNIVHELSGAYCHPEAYRLHKP 65

>2ABB_ARATH (Q39247) Serine/threonine protein phosphatase 2A 55 kDa regulatory|
           subunit B beta isoform (PP2A, subunit B, beta isoform)
           (AtB beta)
          Length = 501

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -2

Query: 632 SIACAAGNSLYMYYA 588
           SIACAA NSLYMYYA
Sbjct: 487 SIACAAANSLYMYYA 501

>2ABA_ARATH (Q38821) Serine/threonine protein phosphatase 2A 55 kDa regulatory|
           subunit B alpha isoform (PP2A, subunit B, alpha isoform)
           (AtB alpha)
          Length = 513

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -2

Query: 632 SIACAAGNSLYMYYA 588
           SIACAA NSLYMYYA
Sbjct: 499 SIACAAANSLYMYYA 513

>VPX_SIVSP (P19508) VPX protein (X ORF protein)|
          Length = 112

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -2

Query: 551 LCNVKASALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSIA 414
           LC ++  A+ M  +K CR L        G GGW PG   PP P +A
Sbjct: 72  LCLIQ-KAMFMHCKKGCRCLGG----EHGAGGWRPGPPPPPPPGLA 112

>VPX_SIVML (P11266) VPX protein (X ORF protein)|
          Length = 112

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -2

Query: 530 ALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSIA 414
           AL M  +K CR L      G   GGW PG   PP P +A
Sbjct: 78  ALFMHCKKGCRCLGE----GHRAGGWRPGPPPPPPPGLA 112

>VPX_SIVMK (P05916) VPX protein (X ORF protein)|
          Length = 112

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -2

Query: 530 ALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSIA 414
           AL M  +K CR L      G   GGW PG   PP P +A
Sbjct: 78  ALFMHCKKGCRCLGE----GHRAGGWRPGPPPPPPPGLA 112

>VPX_HV2RO (P06939) VPX protein (X ORF protein) (Viral accessory protein)|
          Length = 112

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -2

Query: 551 LCNVKASALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSI 417
           LC ++  A++M   K C  L      G G GGW PG   PP P +
Sbjct: 72  LCIIQ-KAVYMHVRKGCTCLGR----GHGPGGWRPGPPPPPPPGL 111

>VPX_HV2D1 (P17760) VPX protein (X ORF protein) (Viral accessory protein)|
          Length = 112

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -2

Query: 566 FTVFGLCNVKASALHMQPEKWCRTLSSIL*LGVGRGGWHPGDGYPPTPSI 417
           +T +    +   A+++  +K C  L      G G GGW PG   PP P +
Sbjct: 66  YTKYRYLCIMQKAVYIHFKKGCTCLGR----GHGPGGWRPGPPPPPPPGL 111

>ROL6_CAEEL (P20784) Cuticle collagen rol-6 (Protein roller-6)|
          Length = 348

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +1

Query: 430 GGYPSPGCQPPLPTPN 477
           GGY + G QPP PTPN
Sbjct: 75  GGYGATGVQPPAPTPN 90

>GRK4_RAT (P70507) G protein-coupled receptor kinase 4 (EC 2.7.11.16) (G|
           protein-coupled receptor kinase GRK4)
          Length = 575

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 13/36 (36%), Positives = 24/36 (66%)
 Frame = +2

Query: 188 WLNLARRHYITLDEEKRKFLTSTVSRYFLGPSEIRI 295
           +L+ A  + +T++EE+R+F  S  SR+F   SE+ +
Sbjct: 82  FLDAAAEYEVTIEEEQREFGLSIYSRFFKENSEVSL 117


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,443,831
Number of Sequences: 219361
Number of extensions: 2232367
Number of successful extensions: 5401
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5400
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)