>HUPK_BRAJA (P48342) Hydrogenase expression/formation protein hupK|
          Length = 362

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
 Frame = -2

Query: 659 ATAXAVVTADLGPDLTQSLR---------EGVAQSVMRGDRGALATAGAPGDHSPQKLRK 507
           AT    +T  +   LT+ LR         +G + + MR    A A  G P +  PQ LR+
Sbjct: 79  ATVRHRLTVVVAERLTELLRGLFVGRRALDGTSAAAMRAVMQASALLGGPSEAVPQALRR 138

Query: 506 WTVAPHLIAVGAPG 465
             VA    AVG  G
Sbjct: 139 DAVAQIRTAVGTLG 152

>CUBN_HUMAN (O60494) Cubilin precursor (Intrinsic factor-cobalamin receptor)|
            (Intrinsic factor-vitamin B12 receptor) (460 kDa
            receptor) (Intestinal intrinsic factor receptor)
          Length = 3623

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
 Frame = -2

Query: 641  VTADLGPDLTQSLREGVAQSVMRGDRGALATAGAPGDHSPQKLRKWT-VAP--------- 492
            VT+D G ++  +         + GDRG+  + G PG +      +W  VAP         
Sbjct: 3494 VTSDRGYEIIWTSSPSGCGGTLYGDRGSFTSPGYPGTYPNNTYCEWVLVAPAGRLVTINF 3553

Query: 491  HLIAVGAPGD 462
            + I++  PGD
Sbjct: 3554 YFISIDDPGD 3563


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,735,739
Number of Sequences: 219361
Number of extensions: 1365831
Number of successful extensions: 4470
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4450
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)