ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal38l23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ019628.1| Triticum aestivum alternative splicing regulator ... 775 0.0
2gb|BT017169.1| Zea mays clone EL01N0368H11.c mRNA sequence 90 1e-14
3gb|AY104051.1| Zea mays PCO093410 mRNA sequence 90 1e-14
4gb|BT019123.1| Zea mays clone Contig737.F mRNA sequence 82 3e-12
5gb|BT016393.1| Zea mays clone Contig226 mRNA sequence 82 3e-12
6gb|AY107198.1| Zea mays PCO093409 mRNA sequence 82 3e-12
7ref|XM_470660.1| Oryza sativa (japonica cultivar-group), predic... 80 1e-11
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 80 1e-11
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
10gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome... 80 1e-11
11dbj|AK073348.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 1e-11
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
13dbj|AK103897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
14dbj|AK060437.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
15dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0... 74 6e-10
16gb|AY107211.1| Zea mays PCO136611 mRNA sequence 68 4e-08
17gb|AC073107.7| Homo sapiens BAC clone RP11-479O9 from 7, complet... 44 0.58
18gb|AC073210.8| Homo sapiens BAC clone RP11-460N20 from 7, comple... 44 0.58
19dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 42 2.3
20dbj|AP000776.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.3
21gb|AF109905.1|MMHC213L3 Mus musculus major histocompatibility lo... 40 9.1
22gb|AC102639.5| Mus musculus chromosome 3, clone RP23-461I15, com... 40 9.1
23gb|AC121563.3| Mus musculus BAC clone RP23-198C23 from chromosom... 40 9.1
24ref|XM_385692.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 9.1
25emb|X94995.1|JSPCHS1 Juglans nigra x Juglans regia mRNA for chal... 40 9.1
26emb|X94706.1|JSPCHS2 Juglans nigra x Juglans regia mRNA for chal... 40 9.1
27emb|AL603842.9| Mouse DNA sequence from clone RP23-100P23 on chr... 40 9.1
28gb|AF534873.1| Spirodela polyrhiza chalcone synthase (CHS) gene,... 40 9.1
29gb|AC087117.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, R... 40 9.1
30gb|AC011474.6| Homo sapiens chromosome 19 clone CTC-525D6, compl... 40 9.1
31gb|AC157522.2| Pan troglodytes BAC clone CH251-520I13 from chrom... 40 9.1
32gb|DP000042.1| Lemur catta target 106 genomic scaffold 40 9.1
33gb|AC156796.2| Mus musculus BAC clone RP24-90N20 from chromosome... 40 9.1
34gb|AC159019.4| Pan troglodytes BAC clone CH251-550K12 from chrom... 40 9.1
35gb|AC109993.4| Homo sapiens chromosome X clone RP11-115M6 map q2... 40 9.1
36gb|AC107450.5| Homo sapiens chromosome X clone CTD-2173L12 map q... 40 9.1
37gb|AC115994.24| Homo sapiens chromosome 17, clone CTD-2535L24, c... 40 9.1
38emb|BX511133.4| Zebrafish DNA sequence from clone DKEY-59H7 in l... 40 9.1
39emb|Z98200.9|HS111B22 Human DNA sequence from clone RP1-111B22 o... 40 9.1
40emb|CR974444.18| Mouse DNA sequence from clone RP23-115O3 on chr... 40 9.1
41emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chr... 40 9.1
42emb|AJ427474.1|OOS427474 Ostertagia ostertagi partial mRNA for c... 40 9.1
43dbj|AB046666.1| Scutellaria baicalensis CHS-C mRNA for chalcone ... 40 9.1
44dbj|AB008748.1| Scutellaria baicalensis mRNA for chalcone syntha... 40 9.1
45emb|AL669836.9| Mouse DNA sequence from clone RP23-79H8 on chrom... 40 9.1 
>gb|DQ019628.1| Triticum aestivum alternative splicing regulator (RSZ38) mRNA,
            complete cds
          Length = 1255

 Score =  775 bits (391), Expect = 0.0
 Identities = 549/600 (91%), Gaps = 4/600 (0%)
 Strand = Plus / Minus

                                                                        
Query: 68   aggaaacagataggaaattcactg-caaaacatcttaaaacttaaatat---gtcacagc 123
            ||||||||| |||||||||||||| ||| || |||||||  | |||| |   |||||| |
Sbjct: 1156 aggaaacaggtaggaaattcactgacaacacgtcttaaacttgaaatgtactgtcacaac 1097

                                                                        
Query: 124  cacatgtagcgaccagaaactggaaaatggttccatgtttcagggagacgcgcttcttcc 183
            |||||||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||
Sbjct: 1096 cacatgtagcgagcagaaactggaaaatggttccacgtttcatggagacacgcttcttcc 1037

                                                                        
Query: 184  tctgggtgagccagagccgcgaaggccatcaccgtcaccattgcctcttggacttgggct 243
            ||| |||||||| ||||| ||| | |||||  ||||||||||||| ||||||||||||||
Sbjct: 1036 tctaggtgagcctgagcctcgacgtccatcgtcgtcaccattgccccttggacttgggct 977

                                                                        
Query: 244  gccaccattaccattgcccttaggactagggctaccgttgttgcccctcgggcttggact 303
            |||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 976  gccaccgttgccattgcccttaggactagggctaccgttgttgcccctcaggcttggact 917

                                                                        
Query: 304  gcccttgttgtccctggcaggactgggactgccattgttagcagggcttctagggctgcg 363
            | || ||||||| |||| |||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 916  ggccctgttgtctctggtaggactgggactgccattgttaacagggcttcttgggctgcg 857

                                                                        
Query: 364  cccattggccacagggctacggtagccatcagaagggctcctgcttgtcctcctgccccg 423
            ||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||
Sbjct: 856  cccattggccacagggctacggtagccatcagatgggctcctgcttgtctccctgccccg 797

                                                                        
Query: 424  agggctgtcaccattatcctttgctacaggggagatggatcgcctggggctccgactgcg 483
            |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 796  agggctatcaccattatcctttgctacaggtgagatggatcgcctggggctccgactgcg 737

                                                                        
Query: 484  atcaggtgtggggctacggtccatttccttagcttctggggagagtgatcgcctggggct 543
            ||||||||||||||| || |||||||||||  || |||||||||||||||||||||||||
Sbjct: 736  atcaggtgtggggctgcgatccatttccttgcctcctggggagagtgatcgcctggggct 677

                                                                        
Query: 544  cctgctgtagctaatgctcctcgatctcctctcatcacgctctgtgcgacgccctctcgg 603
            ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||
Sbjct: 676  cctgctgtagctaatgctccttgatctcctctcatcacgctctgtgcggcgccctctggg 617

                                                                        
Query: 604  agactctgagtaagatctggacctagatcggctgtaactacggcttntgctgtagctccg 663
            ||| || || || ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 616  agattcagaataggatctggacctagatcggctgtaactacggcttctgctgtagctccg 557
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>gb|BT017169.1| Zea mays clone EL01N0368H11.c mRNA sequence
          Length = 1011

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 48/49 (97%)
 Strand = Plus / Minus

                                                            
Query: 356 gggctgcgcccattggccacagggctacggtagccatcagaagggctcc 404
           ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 699 gggctgcgcccattggccacagggctacggtagccatcagatgggctcc 651



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 541 gctcctgctgtagctaatgctcctcgatctcctctcatcacg 582
           |||||||||||||||||  ||||| ||||||||||| |||||
Sbjct: 472 gctcctgctgtagctaagactccttgatctcctctcgtcacg 431



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                              
Query: 629 gatcggctgtaactacggcttntgctgtagctccg 663
           |||||||| || || |||||| |||||||||||||
Sbjct: 390 gatcggctatagctccggcttctgctgtagctccg 356
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>gb|AY104051.1| Zea mays PCO093410 mRNA sequence
          Length = 1288

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 48/49 (97%)
 Strand = Plus / Minus

                                                            
Query: 356 gggctgcgcccattggccacagggctacggtagccatcagaagggctcc 404
           ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 967 gggctgcgcccattggccacagggctacggtagccatcagatgggctcc 919



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 541 gctcctgctgtagctaatgctcctcgatctcctctcatcacg 582
           |||||||||||||||||  ||||| ||||||||||| |||||
Sbjct: 731 gctcctgctgtagctaagactcctagatctcctctcgtcacg 690



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                              
Query: 629 gatcggctgtaactacggcttntgctgtagctccg 663
           |||||||| || || |||||| |||||||||||||
Sbjct: 649 gatcggctatagctccggcttctgctgtagctccg 615
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>gb|BT019123.1| Zea mays clone Contig737.F mRNA sequence
          Length = 724

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                            
Query: 356 gggctgcgcccattggccacagggctacggtagccatcagaagggctcc 404
           ||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 436 gggctgcgcccattgcccacagggctacggtagccatcagacgggctcc 388



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 541 gctcctgctgtagctaatgctcctcgatctcctctcatcacg 582
           |||||||||||||||||  ||||| |||||||||||||||||
Sbjct: 209 gctcctgctgtagctaagactccttgatctcctctcatcacg 168



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                              
Query: 629 gatcggctgtaactacggcttntgctgtagctccg 663
           |||||||| || || |||||| |||||||||||||
Sbjct: 127 gatcggctatagctccggcttctgctgtagctccg 93
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>gb|BT016393.1| Zea mays clone Contig226 mRNA sequence
          Length = 1003

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                            
Query: 356 gggctgcgcccattggccacagggctacggtagccatcagaagggctcc 404
           ||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 631 gggctgcgcccattgcccacagggctacggtagccatcagacgggctcc 583



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 541 gctcctgctgtagctaatgctcctcgatctcctctcatcacg 582
           |||||||||||||||||  ||||| |||||||||||||||||
Sbjct: 404 gctcctgctgtagctaagactccttgatctcctctcatcacg 363



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                              
Query: 629 gatcggctgtaactacggcttntgctgtagctccg 663
           |||||||| || || |||||| |||||||||||||
Sbjct: 322 gatcggctatagctccggcttctgctgtagctccg 288
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>gb|AY107198.1| Zea mays PCO093409 mRNA sequence
          Length = 1566

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                             
Query: 356  gggctgcgcccattggccacagggctacggtagccatcagaagggctcc 404
            ||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 1185 gggctgcgcccattgcccacagggctacggtagccatcagacgggctcc 1137



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 541 gctcctgctgtagctaatgctcctcgatctcctctcatcacg 582
           |||||||||||||||||  ||||| |||||||||||||||||
Sbjct: 958 gctcctgctgtagctaagactccttgatctcctctcatcacg 917



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                              
Query: 629 gatcggctgtaactacggcttntgctgtagctccg 663
           |||||||| || || |||||| |||||||||||||
Sbjct: 876 gatcggctatagctccggcttctgctgtagctccg 842
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>ref|XM_470660.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1170

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 75/86 (87%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                        
Query: 356  gggctgcgcccattggc---cacagggctacggtagccatcagaagggctcctgcttgtc 412
            |||||||||||||||||   |||||||||||||||||| ||||| |||||||||||  ||
Sbjct: 1016 gggctgcgcccattggcagccacagggctacggtagccgtcagatgggctcctgctgttc 957

                                      
Query: 413  ctcctgccccgagggctgtcaccatt 438
              ||||||||  ||||||||||||||
Sbjct: 956  tccctgccccaggggctgtcaccatt 931



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                       
Query: 519 ctggggagagtgatcgcctggggctcctgctgtagctaatgctcctcgatctcctctcat 578
           |||||||||  ||||||||||| || |||||||||||||  ||||| |||||||| ||||
Sbjct: 829 ctggggagatggatcgcctgggacttctgctgtagctaagactccttgatctcctatcat 770

                        
Query: 579 cacgctctgtgcg 591
           |||| ||| ||||
Sbjct: 769 cacgatctctgcg 757



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 443 tttgctacaggggagatggatcgcctggg 471
           |||||| | ||||||||||||||||||||
Sbjct: 836 tttgctgctggggagatggatcgcctggg 808



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 617 gatctggacctagatcggctg 637
           |||||||||||||||||||||
Sbjct: 734 gatctggacctagatcggctg 714
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 75/86 (87%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                           
Query: 356     gggctgcgcccattggc---cacagggctacggtagccatcagaagggctcctgcttgtc 412
               |||||||||||||||||   |||||||||||||||||| ||||| |||||||||||  ||
Sbjct: 9825153 gggctgcgcccattggcagccacagggctacggtagccgtcagatgggctcctgctgttc 9825212

                                         
Query: 413     ctcctgccccgagggctgtcaccatt 438
                 ||||||||  ||||||||||||||
Sbjct: 9825213 tccctgccccaggggctgtcaccatt 9825238



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                           
Query: 519     ctggggagagtgatcgcctggggctcctgctgtagctaatgctcctcgatctcctctcat 578
               |||||||||  ||||||||||| || |||||||||||||  ||||| |||||||| ||||
Sbjct: 9825340 ctggggagatggatcgcctgggacttctgctgtagctaagactccttgatctcctatcat 9825399

                            
Query: 579     cacgctctgtgcg 591
               |||| ||| ||||
Sbjct: 9825400 cacgatctctgcg 9825412



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 617     gatctggacctagatcggctg 637
               |||||||||||||||||||||
Sbjct: 9825435 gatctggacctagatcggctg 9825455



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 443     tttgctacaggggagatggatcgcctggg 471
               |||||| | ||||||||||||||||||||
Sbjct: 9825333 tttgctgctggggagatggatcgcctggg 9825361
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 75/86 (87%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                           
Query: 356     gggctgcgcccattggc---cacagggctacggtagccatcagaagggctcctgcttgtc 412
               |||||||||||||||||   |||||||||||||||||| ||||| |||||||||||  ||
Sbjct: 9823274 gggctgcgcccattggcagccacagggctacggtagccgtcagatgggctcctgctgttc 9823333

                                         
Query: 413     ctcctgccccgagggctgtcaccatt 438
                 ||||||||  ||||||||||||||
Sbjct: 9823334 tccctgccccaggggctgtcaccatt 9823359



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                           
Query: 519     ctggggagagtgatcgcctggggctcctgctgtagctaatgctcctcgatctcctctcat 578
               |||||||||  ||||||||||| || |||||||||||||  ||||| |||||||| ||||
Sbjct: 9823461 ctggggagatggatcgcctgggacttctgctgtagctaagactccttgatctcctatcat 9823520

                            
Query: 579     cacgctctgtgcg 591
               |||| ||| ||||
Sbjct: 9823521 cacgatctctgcg 9823533



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 617     gatctggacctagatcggctg 637
               |||||||||||||||||||||
Sbjct: 9823556 gatctggacctagatcggctg 9823576



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 443     tttgctacaggggagatggatcgcctggg 471
               |||||| | ||||||||||||||||||||
Sbjct: 9823454 tttgctgctggggagatggatcgcctggg 9823482
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>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0013D02, complete sequence
          Length = 131883

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 75/86 (87%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                         
Query: 356   gggctgcgcccattggc---cacagggctacggtagccatcagaagggctcctgcttgtc 412
             |||||||||||||||||   |||||||||||||||||| ||||| |||||||||||  ||
Sbjct: 49344 gggctgcgcccattggcagccacagggctacggtagccgtcagatgggctcctgctgttc 49285

                                       
Query: 413   ctcctgccccgagggctgtcaccatt 438
               ||||||||  ||||||||||||||
Sbjct: 49284 tccctgccccaggggctgtcaccatt 49259



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                         
Query: 519   ctggggagagtgatcgcctggggctcctgctgtagctaatgctcctcgatctcctctcat 578
             |||||||||  ||||||||||| || |||||||||||||  ||||| |||||||| ||||
Sbjct: 49157 ctggggagatggatcgcctgggacttctgctgtagctaagactccttgatctcctatcat 49098

                          
Query: 579   cacgctctgtgcg 591
             |||| ||| ||||
Sbjct: 49097 cacgatctctgcg 49085



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 443   tttgctacaggggagatggatcgcctggg 471
             |||||| | ||||||||||||||||||||
Sbjct: 49164 tttgctgctggggagatggatcgcctggg 49136



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 617   gatctggacctagatcggctg 637
             |||||||||||||||||||||
Sbjct: 49062 gatctggacctagatcggctg 49042
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>dbj|AK073348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025D08, full
           insert sequence
          Length = 1306

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 75/86 (87%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                       
Query: 356 gggctgcgcccattggc---cacagggctacggtagccatcagaagggctcctgcttgtc 412
           |||||||||||||||||   |||||||||||||||||| ||||| |||||||||||  ||
Sbjct: 951 gggctgcgcccattggcagccacagggctacggtagccgtcagatgggctcctgctgttc 892

                                     
Query: 413 ctcctgccccgagggctgtcaccatt 438
             ||||||||  ||||||||||||||
Sbjct: 891 tccctgccccaggggctgtcaccatt 866



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                       
Query: 519 ctggggagagtgatcgcctggggctcctgctgtagctaatgctcctcgatctcctctcat 578
           |||||||||  ||||||||||| || |||||||||||||  ||||| |||||||| ||||
Sbjct: 764 ctggggagatggatcgcctgggacttctgctgtagctaagactccttgatctcctatcat 705

                        
Query: 579 cacgctctgtgcg 591
           |||| ||| ||||
Sbjct: 704 cacgatctctgcg 692



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 617 gatctggacctagatcggctgtaact 642
           ||||||||||||||||||||||||||
Sbjct: 669 gatctggacctagatcggctgtaact 644



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 443 tttgctacaggggagatggatcgcctggg 471
           |||||| | ||||||||||||||||||||
Sbjct: 771 tttgctgctggggagatggatcgcctggg 743
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                          
Query: 375    cagggctacggtagccatcagaagggctcctgcttgtcctcctgccccgagggctgtcac 434
              |||||||||||||||||||||| |||||||||||  ||  ||||||||| ||||||||||
Sbjct: 985897 cagggctacggtagccatcagacgggctcctgctgttctccctgccccgggggctgtcac 985956

               
Query: 435    c 435
              |
Sbjct: 985957 c 985957



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                          
Query: 484    atcaggtgtggggctacggtccatttccttagcttctggggagagtgatcgcctggggct 543
              |||||| |||||||| || | | |||| || ||| |||||||||  ||||||||||| ||
Sbjct: 986039 atcaggggtggggctgcgcttcttttcatttgctgctggggagatggatcgcctgggact 986098

                                         
Query: 544    cctgctgtagctaatgctcctcgatct 570
              ||||||||| ||||  ||||| |||||
Sbjct: 986099 cctgctgtaactaagactccttgatct 986125



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 443    tttgctacaggggagatggatcgcctggggctcc 476
              |||||| | |||||||||||||||||||| ||||
Sbjct: 986067 tttgctgctggggagatggatcgcctgggactcc 986100
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>dbj|AK103897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150I04, full
           insert sequence
          Length = 1306

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                       
Query: 375 cagggctacggtagccatcagaagggctcctgcttgtcctcctgccccgagggctgtcac 434
           |||||||||||||||||||||| |||||||||||  ||  ||||||||| ||||||||||
Sbjct: 889 cagggctacggtagccatcagacgggctcctgctgttctccctgccccgggggctgtcac 830

            
Query: 435 c 435
           |
Sbjct: 829 c 829



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                       
Query: 484 atcaggtgtggggctacggtccatttccttagcttctggggagagtgatcgcctggggct 543
           |||||| |||||||| || | | |||| || ||| |||||||||  ||||||||||| ||
Sbjct: 747 atcaggggtggggctgcgcttcttttcatttgctgctggggagatggatcgcctgggact 688

                                      
Query: 544 cctgctgtagctaatgctcctcgatct 570
           ||||||||| ||||  ||||| |||||
Sbjct: 687 cctgctgtaactaagactccttgatct 661



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 617 gatctggacctagatcggctgtaactacggct 648
           |||||||||||||| ||||||||||| |||||
Sbjct: 623 gatctggacctagaccggctgtaactgcggct 592



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 443 tttgctacaggggagatggatcgcctggggctcc 476
           |||||| | |||||||||||||||||||| ||||
Sbjct: 719 tttgctgctggggagatggatcgcctgggactcc 686
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>dbj|AK060437.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-D02, full
           insert sequence
          Length = 1152

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                       
Query: 375 cagggctacggtagccatcagaagggctcctgcttgtcctcctgccccgagggctgtcac 434
           |||||||||||||||||||||| |||||||||||  ||  ||||||||| ||||||||||
Sbjct: 784 cagggctacggtagccatcagacgggctcctgctgttctccctgccccgggggctgtcac 725

            
Query: 435 c 435
           |
Sbjct: 724 c 724



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                       
Query: 484 atcaggtgtggggctacggtccatttccttagcttctggggagagtgatcgcctggggct 543
           |||||| |||||||| || | | |||| || ||| |||||||||  ||||||||||| ||
Sbjct: 642 atcaggggtggggctgcgcttcttttcatttgctgctggggagatggatcgcctgggact 583

                                      
Query: 544 cctgctgtagctaatgctcctcgatct 570
           ||||||||| ||||  ||||| |||||
Sbjct: 582 cctgctgtaactaagactccttgatct 556



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 617 gatctggacctagatcggctgtaactacggct 648
           |||||||||||||| ||||||||||| |||||
Sbjct: 518 gatctggacctagaccggctgtaactgcggct 487



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 443 tttgctacaggggagatggatcgcctggggctcc 476
           |||||| | |||||||||||||||||||| ||||
Sbjct: 614 tttgctgctggggagatggatcgcctgggactcc 581
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>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04
          Length = 175439

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                         
Query: 375   cagggctacggtagccatcagaagggctcctgcttgtcctcctgccccgagggctgtcac 434
             |||||||||||||||||||||| |||||||||||  ||  ||||||||| ||||||||||
Sbjct: 76294 cagggctacggtagccatcagacgggctcctgctgttctccctgccccgggggctgtcac 76353

              
Query: 435   c 435
             |
Sbjct: 76354 c 76354



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                         
Query: 484   atcaggtgtggggctacggtccatttccttagcttctggggagagtgatcgcctggggct 543
             |||||| |||||||| || | | |||| || ||| |||||||||  ||||||||||| ||
Sbjct: 76436 atcaggggtggggctgcgcttcttttcatttgctgctggggagatggatcgcctgggact 76495

                                        
Query: 544   cctgctgtagctaatgctcctcgatct 570
             ||||||||| ||||  ||||| |||||
Sbjct: 76496 cctgctgtaactaagactccttgatct 76522



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 443   tttgctacaggggagatggatcgcctggggctcc 476
             |||||| | |||||||||||||||||||| ||||
Sbjct: 76464 tttgctgctggggagatggatcgcctgggactcc 76497
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>gb|AY107211.1| Zea mays PCO136611 mRNA sequence
          Length = 1362

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 537 tggggctcctgctgtagctaatgctcctcgatctcctctcatcacg 582
           |||||||||||||||||||||  |||||||||||||| ||||||||
Sbjct: 734 tggggctcctgctgtagctaagactcctcgatctcctatcatcacg 689
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>gb|AC073107.7| Homo sapiens BAC clone RP11-479O9 from 7, complete sequence
          Length = 194178

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 401    ctcctgcttgtcctcctgccccgagg 426
              |||||| |||||||||||||||||||
Sbjct: 147992 ctcctggttgtcctcctgccccgagg 148017
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>gb|AC073210.8| Homo sapiens BAC clone RP11-460N20 from 7, complete sequence
          Length = 203396

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 401    ctcctgcttgtcctcctgccccgagg 426
              |||||| |||||||||||||||||||
Sbjct: 149977 ctcctggttgtcctcctgccccgagg 150002
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 243     tgccaccattaccattgccct 263
               |||||||||||||||||||||
Sbjct: 6098082 tgccaccattaccattgccct 6098102
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>dbj|AP000776.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-748H22, complete
              sequence
          Length = 191270

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 47     gagcaacaaaataccaggtttagga 71
              ||||||||||||||||| |||||||
Sbjct: 157383 gagcaacaaaataccagctttagga 157407
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>gb|AF109905.1|MMHC213L3 Mus musculus major histocompatibility locus class III regions Hsc70t
              gene, partial cds; smRNP, G7A, NG23, MutS homolog, CLCP,
              NG24, NG25, and NG26 genes, complete cds; and unknown genes
          Length = 135545

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    ctgcttgtcctcctgccccg 423
              ||||||||||||||||||||
Sbjct: 123311 ctgcttgtcctcctgccccg 123330
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>gb|AC102639.5| Mus musculus chromosome 3, clone RP23-461I15, complete sequence
          Length = 199243

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    ccagaaactggaaaatggtt 155
              ||||||||||||||||||||
Sbjct: 139615 ccagaaactggaaaatggtt 139634
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>gb|AC121563.3| Mus musculus BAC clone RP23-198C23 from chromosome 3, complete sequence
          Length = 208350

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    ccagaaactggaaaatggtt 155
              ||||||||||||||||||||
Sbjct: 147625 ccagaaactggaaaatggtt 147606
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>ref|XM_385692.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05516.1)
           partial mRNA
          Length = 3375

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 117 tcacagccacatgtagcgac 136
           ||||||||||||||||||||
Sbjct: 784 tcacagccacatgtagcgac 765
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>emb|X94995.1|JSPCHS1 Juglans nigra x Juglans regia mRNA for chalcone synthase (CHS1)
          Length = 1525

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 229 tcttggacttgggctgccaccatt 252
           |||||||||||||||||| |||||
Sbjct: 500 tcttggacttgggctgcccccatt 477
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>emb|X94706.1|JSPCHS2 Juglans nigra x Juglans regia mRNA for chalcone synthase (CHS2)
          Length = 1534

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 229 tcttggacttgggctgccaccatt 252
           |||||||||||||||||| |||||
Sbjct: 509 tcttggacttgggctgcccccatt 486
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>emb|AL603842.9| Mouse DNA sequence from clone RP23-100P23 on chromosome 11 Contains the
             5' end of a novel gene, three novel genes, the Slc6a4 gene
             for solute carrier family 6 (neurotransmitter transporter,
             serotonin) member 4, the Blmh gene for bleomycin hydrolase
             and three CpG islands, complete sequence
          Length = 229289

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 542   ctcctgctgtagctaatgct 561
             ||||||||||||||||||||
Sbjct: 30282 ctcctgctgtagctaatgct 30263
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>gb|AF534873.1| Spirodela polyrhiza chalcone synthase (CHS) gene, partial cds
          Length = 482

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 229 tcttggacttgggctgccaccatt 252
           |||||||||||||||||| |||||
Sbjct: 36  tcttggacttgggctgcccccatt 13
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>gb|AC087117.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, RP23-349B4, Complete
              Sequence, complete sequence
          Length = 221899

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    ctgcttgtcctcctgccccg 423
              ||||||||||||||||||||
Sbjct: 209173 ctgcttgtcctcctgccccg 209192
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>gb|AC011474.6| Homo sapiens chromosome 19 clone CTC-525D6, complete sequence
          Length = 194718

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    cctgcttgtcctcctgcccc 422
              ||||||||||||||||||||
Sbjct: 118399 cctgcttgtcctcctgcccc 118418
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>gb|AC157522.2| Pan troglodytes BAC clone CH251-520I13 from chromosome unknown, complete
              sequence
          Length = 221631

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     cactgcaaaacatcttaaaa 106
              ||||||||||||||||||||
Sbjct: 218941 cactgcaaaacatcttaaaa 218922
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>gb|DP000042.1| Lemur catta target 106 genomic scaffold
          Length = 452647

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   cctggcaggactgggactgc 335
             ||||||||||||||||||||
Sbjct: 49669 cctggcaggactgggactgc 49688
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>gb|AC156796.2| Mus musculus BAC clone RP24-90N20 from chromosome 9, complete sequence
          Length = 204185

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 89    ctgcaaaacatcttaaaacttaaa 112
             ||||| ||||||||||||||||||
Sbjct: 62454 ctgcagaacatcttaaaacttaaa 62431
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>gb|AC159019.4| Pan troglodytes BAC clone CH251-550K12 from chromosome unknown,
             complete sequence
          Length = 196429

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    cactgcaaaacatcttaaaa 106
             ||||||||||||||||||||
Sbjct: 39541 cactgcaaaacatcttaaaa 39522
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>gb|AC109993.4| Homo sapiens chromosome X clone RP11-115M6 map q28, complete sequence
          Length = 178498

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    caacaaaataccaggtttag 69
             ||||||||||||||||||||
Sbjct: 19212 caacaaaataccaggtttag 19231
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>gb|AC107450.5| Homo sapiens chromosome X clone CTD-2173L12 map q28, complete sequence
          Length = 115757

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    caacaaaataccaggtttag 69
             ||||||||||||||||||||
Sbjct: 46569 caacaaaataccaggtttag 46588
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>gb|AC115994.24| Homo sapiens chromosome 17, clone CTD-2535L24, complete sequence
          Length = 242913

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   ccctggcaggactgggactg 334
             ||||||||||||||||||||
Sbjct: 99193 ccctggcaggactgggactg 99174
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>emb|BX511133.4| Zebrafish DNA sequence from clone DKEY-59H7 in linkage group 20,
             complete sequence
          Length = 157916

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    caaaacatcttaaaacttaa 111
             ||||||||||||||||||||
Sbjct: 68429 caaaacatcttaaaacttaa 68410
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>emb|Z98200.9|HS111B22 Human DNA sequence from clone RP1-111B22 on chromosome 6q16-21 Contains
             a ribosomal protein L3 (RPL3) pseudogenee, the OSTM1 gene
             for osteopetrosis associated transmembrane, the 5' end of
             a novel gene and three CpG islands, complete sequence
          Length = 153382

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    cactgcaaaacatcttaaaa 106
             ||||||||||||||||||||
Sbjct: 69893 cactgcaaaacatcttaaaa 69874
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>emb|CR974444.18| Mouse DNA sequence from clone RP23-115O3 on chromosome 17, complete
             sequence
          Length = 190041

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   ctgcttgtcctcctgccccg 423
             ||||||||||||||||||||
Sbjct: 36551 ctgcttgtcctcctgccccg 36570
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>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete
              sequence
          Length = 209214

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    gtccatttccttagcttctg 521
              ||||||||||||||||||||
Sbjct: 192093 gtccatttccttagcttctg 192112
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>emb|AJ427474.1|OOS427474 Ostertagia ostertagi partial mRNA for cytochrome c oxidase, clone
           F177f
          Length = 538

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  caacaaaataccaggtttag 69
           ||||||||||||||||||||
Sbjct: 154 caacaaaataccaggtttag 135
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>dbj|AB046666.1| Scutellaria baicalensis CHS-C mRNA for chalcone synthase, complete
           cds
          Length = 1303

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 229 tcttggacttgggctgccaccatt 252
           |||||||||||||||||| |||||
Sbjct: 384 tcttggacttgggctgcccccatt 361
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>dbj|AB008748.1| Scutellaria baicalensis mRNA for chalcone synthase, complete cds
          Length = 1363

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 229 tcttggacttgggctgccaccatt 252
           |||||||||||||||||| |||||
Sbjct: 438 tcttggacttgggctgcccccatt 415
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>emb|AL669836.9| Mouse DNA sequence from clone RP23-79H8 on chromosome 2, complete
             sequence
          Length = 141877

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 219   caccattgcctcttggacttgggctgcc 246
             |||| ||||||| |||||||||||||||
Sbjct: 58118 cacctttgcctcatggacttgggctgcc 58091


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,271,386
Number of Sequences: 3902068
Number of extensions: 5271386
Number of successful extensions: 111595
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111399
Number of HSP's gapped (non-prelim): 189
length of query: 663
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 640
effective length of database: 17,143,297,704
effective search space: 10971710530560
effective search space used: 10971710530560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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