ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal8i24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AJ298132.1|HVU298132 Hordeum vulgare mRNA for polyamine oxid... 797 0.0
2emb|AJ234402.1|HVU234402 Hordeum vulgare partial mRNA; clone cMW... 400 e-108
3emb|AJ304793.1|HVU304793 Hordeum vulgare bpao2 gene for flavin c... 325 9e-86
4emb|AJ298131.1|HVU298131 Hordeum vulgare mRNA for polyamine oxid... 188 1e-44
5ref|XM_470573.1| Oryza sativa (japonica cultivar-group), predic... 163 8e-37
6ref|XM_450667.1| Oryza sativa (japonica cultivar-group), mRNA 161 3e-36
7emb|AJ002204.1|ZMJ002204 Zea mays mRNA for flavin containing pol... 157 5e-35
8gb|AY107888.1| Zea mays PCO061908 mRNA sequence 157 5e-35
9emb|AJ251568.1|ZMA251568 Zea mays PAO gene for flavin containing... 149 1e-32
10emb|AJ251018.1|ZMA251018 Zea mays pao gene for polyamine oxidase... 149 1e-32
11emb|AJ251019.1|ZMA251019 Zea mays pao gene for polyamine oxidase... 141 3e-30
12ref|XM_450669.1| Oryza sativa (japonica cultivar-group), mRNA 139 1e-29
13dbj|AK069392.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 98 4e-17
15gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome... 98 4e-17
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
17emb|AJ304792.1|HVU304792 Hordeum vulgare bpao1 gene for flavin c... 94 6e-16
18dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
19dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
20dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
21gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 geno... 50 0.008
22dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
23gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.008
24gb|AC110085.3| Homo sapiens BAC clone RP11-603P13 from 4, comple... 42 2.0
25gb|AC161607.4| Mus musculus BAC clone RP23-152L11 from chromosom... 42 2.0
26emb|AL928639.5| Mouse DNA sequence from clone RP23-446O17 on chr... 42 2.0
27gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
28emb|BX005412.17| Zebrafish DNA sequence from clone DKEY-23O4 in ... 40 8.1
29ref|XM_627096.1| Cryptosporidium parvum Iowa II mannose-6-phosph... 40 8.1
30dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
31emb|BX248414.5| Zebrafish DNA sequence from clone CH211-236E8, c... 40 8.1

>emb|AJ298132.1|HVU298132 Hordeum vulgare mRNA for polyamine oxidase (bpao2 gene)
          Length = 1700

 Score =  797 bits (402), Expect = 0.0
 Identities = 425/430 (98%), Gaps = 2/430 (0%)
 Strand = Plus / Minus

                                                                        
Query: 164  aaaagcttccacgttaactgtggcacgcgtctgagtttattccatgacgatgcatgcgag 223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1700 aaaagcttccacgttaactgtggcacgcgtctgagtttattccatgacgatgcatgcgag 1641

                                                                        
Query: 224  cagactggcatggcatctcaacttcctccttcatttagcctcagctttcagctcgtcgtc 283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1640 cagactggcatggcatctcaacttcctccttcatttagcctcagctttcagctcgtcgtc 1581

                                                                        
Query: 284  atacttgggacggactttaaagtcgacgttgttgagggccttgttcatcagaatgtccgc 343
            ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 1580 atacttgggacggactttaaagtcgacgttgttggaggccttgttcatcagaatgtccgc 1521

                                                                        
Query: 344  ggagtgtatacctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgt 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1520 ggagtgtatacctgcaagataagctccgtggacatagccattgtagtgctcgc-tggtgt 1462

                                                                        
Query: 404  gctccccggtgaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagc 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1461 gctccccggtgaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagc 1402

                                                                        
Query: 464  ggttgacgccgatgggccagttggagtaggagcccttgaagaatcggttggaccaccagc 523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1401 ggttgacgccgatgggccagttggagtaggagcccttgaagaatcggttggaccaccagc 1342

                                                                        
Query: 524  gcggcacgtagatatcggtggcgtcgggggacgtcccggtcggggaacatgttgcgcagc 583
            || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1341 gcagcacgtagatatcggtggcgtc-ggggacgtcccggtcggggaacatgttgcgcagc 1283

                      
Query: 584  acgcccacgg 593
            ||||||||||
Sbjct: 1282 acgcccacgg 1273



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>emb|AJ234402.1|HVU234402 Hordeum vulgare partial mRNA; clone cMWG0647
          Length = 252

 Score =  400 bits (202), Expect = e-108
 Identities = 240/247 (97%), Gaps = 6/247 (2%)
 Strand = Plus / Minus

                                                                       
Query: 9   cctcgacggcca-gtgtttttattcgatcaa-ttacaagaaattacatcactggaacgct 66
           |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 249 cctcgacggccaagtgtttttattcgatcaaattacaagaaattacatcactggaacgct 190

                                                                       
Query: 67  tcaacaggaaccacatactctcggagaatccaaacacgggaggcacgaaagaaagctgga 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tcaacaggaaccacatactctcggagaatccaaacacgggaggcacgaaagaaagctgga 130

                                                                       
Query: 127 acgtcacattatttcgcctcacatcaaattcttggggaaaagcttccacgttaa-ctg-- 183
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  
Sbjct: 129 acgtcacattatttcgcctcacatcaaattcttggggaaaagcttccacgttaacctgct 70

                                                                       
Query: 184 tggcacgcgtctgagtttatt-ccatgacgatgcatgcgagcagactggcatggcatctc 242
           |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 69  tggcacgcvtctgagtttattcccatgacgatgcatgcgagcagactggcatggcatctc 10

                  
Query: 243 aacttcc 249
           |||||||
Sbjct: 9   aacttcc 3



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>emb|AJ304793.1|HVU304793 Hordeum vulgare bpao2 gene for flavin containing polyamine oxidase,
            exons 1-8
          Length = 4217

 Score =  325 bits (164), Expect = 9e-86
 Identities = 177/180 (98%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                        
Query: 262  cctcagctttcagctcgtcgtcatacttgggacggactttaaagtcgacgttgttgaggg 321
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 3994 cctcagctttcagctcgtcgtcatacttgggacggactttaaagtcgacgttgttggagg 3935

                                                                        
Query: 322  ccttgttcatcagaatgtccgcggagtgtatacctgcaagataagctccgtggacatagc 381
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3934 ccttgttcatcagaatgtccgcggagtgtatacctgcaagataagctccgtggacatagc 3875

                                                                        
Query: 382  cattgtagtgctcgcttggtgtgctccccggtgaagtagacccgcccgccaaccggcgcc 441
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3874 cattgtagtgctcgc-tggtgtgctccccggtgaagtagacccgcccgccaaccggcgcc 3816



 Score =  281 bits (142), Expect = 1e-72
 Identities = 152/154 (98%), Gaps = 1/154 (0%)
 Strand = Plus / Minus

                                                                        
Query: 440  cccggagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagccct 499
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3690 cccggagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagccct 3631

                                                                        
Query: 500  tgaagaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcgggggacgtcc 559
            |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 3630 tgaagaatcggttggaccaccagcgcagcacgtagatatcggtggcgtc-ggggacgtcc 3572

                                              
Query: 560  cggtcggggaacatgttgcgcagcacgcccacgg 593
            ||||||||||||||||||||||||||||||||||
Sbjct: 3571 cggtcggggaacatgttgcgcagcacgcccacgg 3538



 Score =  200 bits (101), Expect = 4e-48
 Identities = 101/101 (100%)
 Strand = Plus / Minus

                                                                        
Query: 164  aaaagcttccacgttaactgtggcacgcgtctgagtttattccatgacgatgcatgcgag 223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4217 aaaagcttccacgttaactgtggcacgcgtctgagtttattccatgacgatgcatgcgag 4158

                                                     
Query: 224  cagactggcatggcatctcaacttcctccttcatttagcct 264
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4157 cagactggcatggcatctcaacttcctccttcatttagcct 4117



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>emb|AJ298131.1|HVU298131 Hordeum vulgare mRNA for polyamine oxidase (bpao1 gene)
          Length = 1583

 Score =  188 bits (95), Expect = 1e-44
 Identities = 210/245 (85%), Gaps = 5/245 (2%)
 Strand = Plus / Minus

                                                                        
Query: 330  atcagaatgtccgcggagtgtatacctgcaagataagctccgtggacatagccattgtag 389
            ||||||||||| || ||||  ||||||| |||||||||||| |||||||| || ||||||
Sbjct: 1478 atcagaatgtctgcagagtcaatacctgaaagataagctccatggacataaccgttgtag 1419

                                                                        
Query: 390  tgctcgcttggtgtgctccccggtgaagtagacccgcccgccaaccggcgcccggagctg 449
            |||||||| ||||||||||||||||||||| |||| ||||   ||||| |||| ||||||
Sbjct: 1418 tgctcgct-ggtgtgctccccggtgaagtaaaccctcccg---accggtgccctgagctg 1363

                                                                        
Query: 450  gtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaagaatcg 509
            |||||| ||||||||||||||||||||||||||||||||| ||| |||| || |||| | 
Sbjct: 1362 gtcgtattcgtagcggttgacgccgatgggccagttggagaaggtgcccctgtagaacct 1303

                                                                        
Query: 510  gttggaccaccagcgcggcacgtagatatcggtggcgtcgggggacgtcccggtcgggga 569
            || ||||||||| || ||||||  ||| || || ||||| ||||||||||  | ||||||
Sbjct: 1302 gtcggaccaccaccgtggcacgaggatgtccgtcgcgtc-ggggacgtcctcgccgggga 1244

                 
Query: 570  acatg 574
            |||||
Sbjct: 1243 acatg 1239



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>ref|XM_470573.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1044

 Score =  163 bits (82), Expect = 8e-37
 Identities = 215/256 (83%), Gaps = 5/256 (1%)
 Strand = Plus / Minus

                                                                       
Query: 330 atcagaatgtccgcggagtgtatacctgcaagataagctccgtggacatagccattgtag 389
           |||||||| ||||| ||||  ||||||||||||||| |||| ||||||||||||||||||
Sbjct: 989 atcagaatttccgcagagtcaatacctgcaagataacctccatggacatagccattgtag 930

                                                                       
Query: 390 tgctcgcttggtgtgctccccggtgaagtagacccgcccgccaaccggcgcccggagctg 449
           | ||||||| |||||||| ||||||||||| |||| |    ||| ||| |||| ||||||
Sbjct: 929 tactcgctt-gtgtgctcaccggtgaagtaaaccctc---tcaatcggggccctgagctg 874

                                                                       
Query: 450 gtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaagaatcg 509
           ||| || ||||||||||||||||| ||||||||||||||| ||| ||||||| |||| | 
Sbjct: 873 gtcatattcgtagcggttgacgccaatgggccagttggagaaggtgcccttgtagaacct 814

                                                                       
Query: 510 gttggaccaccagcgcggcacgtagatatcggtggcgtcgggggacgtcccggtcgggga 569
           ||| |||||||| |  || |||  ||| || ||||||||  ||||||||| |||| ||||
Sbjct: 813 gtttgaccaccatcttgggacgaggatgtcagtggcgtc-agggacgtcctggtcaggga 755

                           
Query: 570 acatgttgcgcagcac 585
           ||||||| | ||||||
Sbjct: 754 acatgttcctcagcac 739



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>ref|XM_450667.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1473

 Score =  161 bits (81), Expect = 3e-36
 Identities = 189/223 (84%), Gaps = 4/223 (1%)
 Strand = Plus / Minus

                                                                        
Query: 330  atcagaatgtccgcggagtgtatacctgcaagataagctccgtggacatagccattgtag 389
            |||||||| || || ||||  |||||||||||||||||||| ||||||||||||||||||
Sbjct: 1418 atcagaatctctgcagagtcaatacctgcaagataagctccatggacatagccattgtag 1359

                                                                        
Query: 390  tgctcgcttggtgtgctccccggtgaagtagacccgcccgccaaccggcgcccggagctg 449
             |||||| | |||||||| ||||||||||| || | |   ||||||||||||| ||||||
Sbjct: 1358 cgctcgc-tcgtgtgctcaccggtgaagtacactctc---ccaaccggcgccctgagctg 1303

                                                                        
Query: 450  gtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaagaatcg 509
            ||| |||||||||||  ||||||||||||||||||||||| ||  ||||  |||||| | 
Sbjct: 1302 gtcatactcgtagcgactgacgccgatgggccagttggagaagctgccccggaagaacct 1243

                                                       
Query: 510  gttggaccaccagcgcggcacgtagatatcggtggcgtcgggg 552
            || ||||||||| | ||| |||  ||| |||||||||||||||
Sbjct: 1242 gtcggaccaccatctcgggacgaggatgtcggtggcgtcgggg 1200



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>emb|AJ002204.1|ZMJ002204 Zea mays mRNA for flavin containing polyamine oxidase (PAO)
          Length = 1750

 Score =  157 bits (79), Expect = 5e-35
 Identities = 212/253 (83%), Gaps = 5/253 (1%)
 Strand = Plus / Minus

                                                                        
Query: 333  agaatgtccgcggagtgtatacctgcaagataagctccgtggacatagccattgtagtgc 392
            ||||| || |||||||  ||||||| |||||| ||||| |||||||||||||||||||||
Sbjct: 1514 agaatttcagcggagtcgatacctgaaagataggctccatggacatagccattgtagtgc 1455

                                                                        
Query: 393  tcgcttggtgtgctccccggtgaagtagacccgcccgccaaccggcgcccggagctggtc 452
            ||||| ||||||||| ||||||||||| |||| |||   |||||| ||||  ||||||||
Sbjct: 1454 tcgct-ggtgtgctcgccggtgaagtataccctccc---aaccggtgccctaagctggtc 1399

                                                                        
Query: 453  gtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaagaatcggtt 512
            ||| ||||||||||||||||| |  |||||||||||| ||| ||||||| |||| | || 
Sbjct: 1398 gtattcgtagcggttgacgccaactggccagttggagaaggtgcccttgtagaacctgtc 1339

                                                                        
Query: 513  ggaccaccagcgcggcacgtagatatcggtggcgtcgggggacgtcccggtcggggaaca 572
            ||||||||| | ||| ||   ||| |||||||||||  |||||||||  | |||||||||
Sbjct: 1338 ggaccaccacctcgggacaaggatgtcggtggcgtc-cgggacgtccttgccggggaaca 1280

                         
Query: 573  tgttgcgcagcac 585
            | || ||||||||
Sbjct: 1279 tcttccgcagcac 1267



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>gb|AY107888.1| Zea mays PCO061908 mRNA sequence
          Length = 1895

 Score =  157 bits (79), Expect = 5e-35
 Identities = 212/253 (83%), Gaps = 5/253 (1%)
 Strand = Plus / Minus

                                                                        
Query: 333  agaatgtccgcggagtgtatacctgcaagataagctccgtggacatagccattgtagtgc 392
            ||||| || |||||||  ||||||| |||||| ||||| |||||||||||||||||||||
Sbjct: 1520 agaatttcagcggagtcgatacctgaaagataggctccatggacatagccattgtagtgc 1461

                                                                        
Query: 393  tcgcttggtgtgctccccggtgaagtagacccgcccgccaaccggcgcccggagctggtc 452
            ||||| ||||||||| ||||||||||| |||| |||   |||||| ||||  ||||||||
Sbjct: 1460 tcgct-ggtgtgctcgccggtgaagtataccctccc---aaccggtgccctaagctggtc 1405

                                                                        
Query: 453  gtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaagaatcggtt 512
            ||| ||||||||||||||||| |  |||||||||||| ||| ||||||| |||| | || 
Sbjct: 1404 gtattcgtagcggttgacgccaactggccagttggagaaggtgcccttgtagaacctgtc 1345

                                                                        
Query: 513  ggaccaccagcgcggcacgtagatatcggtggcgtcgggggacgtcccggtcggggaaca 572
            ||||||||| | ||| ||   ||| |||||||||||  |||||||||  | |||||||||
Sbjct: 1344 ggaccaccacctcgggacaaggatgtcggtggcgtc-cgggacgtccttgccggggaaca 1286

                         
Query: 573  tgttgcgcagcac 585
            | || ||||||||
Sbjct: 1285 tcttccgcagcac 1273



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>emb|AJ251568.1|ZMA251568 Zea mays PAO gene for flavin containing polyamine oxidase, exons 1-8
          Length = 4096

 Score =  149 bits (75), Expect = 1e-32
 Identities = 196/233 (84%), Gaps = 5/233 (2%)
 Strand = Plus / Minus

                                                                        
Query: 353  acctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctccccgg 412
            ||||| |||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 3900 acctgaaagataggctccatggacatagccattgtagtgctcgct-ggtgtgctcgccgg 3842

                                                                        
Query: 413  tgaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagcggttgacgc 472
            ||||||| |||| |||   |||||| ||||  ||||||||||| ||||||||||||||||
Sbjct: 3841 tgaagtataccctccc---aaccggtgccctaagctggtcgtattcgtagcggttgacgc 3785

                                                                        
Query: 473  cgatgggccagttggagtaggagcccttgaagaatcggttggaccaccagcgcggcacgt 532
            | |  |||||||||||| ||| ||||||| |||| | || ||||||||| | ||| ||  
Sbjct: 3784 caactggccagttggagaaggtgcccttgtagaacctgtcggaccaccacctcgggacaa 3725

                                                                 
Query: 533  agatatcggtggcgtcgggggacgtcccggtcggggaacatgttgcgcagcac 585
             ||| |||||||||||  |||||||||  | |||||||||| || ||||||||
Sbjct: 3724 ggatgtcggtggcgtc-cgggacgtccttgccggggaacatcttccgcagcac 3673



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>emb|AJ251018.1|ZMA251018 Zea mays pao gene for polyamine oxidase, exons 1-8, clone pMPAO2
          Length = 4344

 Score =  149 bits (75), Expect = 1e-32
 Identities = 196/233 (84%), Gaps = 5/233 (2%)
 Strand = Plus / Minus

                                                                        
Query: 353  acctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctccccgg 412
            ||||| |||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 4147 acctgaaagataggctccatggacatagccattgtagtgctcgct-ggtgtgctcaccgg 4089

                                                                        
Query: 413  tgaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagcggttgacgc 472
            ||||||| |||| |||   |||||| ||||  ||||||||||| ||||||||||||||||
Sbjct: 4088 tgaagtataccctccc---aaccggtgccctaagctggtcgtattcgtagcggttgacgc 4032

                                                                        
Query: 473  cgatgggccagttggagtaggagcccttgaagaatcggttggaccaccagcgcggcacgt 532
            | |  |||||||||||| ||| ||||||| |||| | || ||||||||| | ||| ||  
Sbjct: 4031 caactggccagttggagaaggtgcccttgtagaacctgtcggaccaccatctcgggacaa 3972

                                                                 
Query: 533  agatatcggtggcgtcgggggacgtcccggtcggggaacatgttgcgcagcac 585
             ||| |||||||||||  |||||||||  | |||||||||| || ||||||||
Sbjct: 3971 ggatgtcggtggcgtc-cgggacgtccttgccggggaacatcttccgcagcac 3920



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>emb|AJ251019.1|ZMA251019 Zea mays pao gene for polyamine oxidase, exons 1-8, clone pMPAO3
          Length = 3384

 Score =  141 bits (71), Expect = 3e-30
 Identities = 195/233 (83%), Gaps = 5/233 (2%)
 Strand = Plus / Minus

                                                                        
Query: 353  acctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctccccgg 412
            ||||| |||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 3188 acctgaaagataggctccatggacatagccattgtagtgctcgct-ggtgtgctcaccgg 3130

                                                                        
Query: 413  tgaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagcggttgacgc 472
            ||||||| |||| |||   |||||| ||||  ||||||||||| ||||||||||||||||
Sbjct: 3129 tgaagtataccctccc---aaccggtgccctaagctggtcgtattcgtagcggttgacgc 3073

                                                                        
Query: 473  cgatgggccagttggagtaggagcccttgaagaatcggttggaccaccagcgcggcacgt 532
            | |  |||||||| ||| ||| ||||||| |||| | || ||||||||| | ||| ||  
Sbjct: 3072 caactggccagttagagaaggtgcccttgtagaacctgtcggaccaccacctcgggacaa 3013

                                                                 
Query: 533  agatatcggtggcgtcgggggacgtcccggtcggggaacatgttgcgcagcac 585
             ||| |||||||||||  |||||||||  | |||||||||| || ||||||||
Sbjct: 3012 ggatgtcggtggcgtc-tgggacgtccttgccggggaacatcttccgcagcac 2961



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>ref|XM_450669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1588

 Score =  139 bits (70), Expect = 1e-29
 Identities = 188/224 (83%), Gaps = 5/224 (2%)
 Strand = Plus / Minus

                                                                        
Query: 351  atacctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctcccc 410
            |||||||||||||||||||| |||||||||||||||||| |||||| | |||||||| ||
Sbjct: 1430 atacctgcaagataagctccatggacatagccattgtagcgctcgc-tcgtgtgctcacc 1372

                                                                        
Query: 411  ggtgaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagcggttgac 470
            |||||| ||||| | |   ||||||||||||| ||||||||| |  ||||||||  ||||
Sbjct: 1371 ggtgaaatagactctc---ccaaccggcgccctgagctggtcatgttcgtagcgactgac 1315

                                                                        
Query: 471  gccgatgggccagttggagtaggagcccttgaagaatcggttggaccaccagcgcggcac 530
            ||||||||||||||||||| ||  ||| | |||||| | ||  |||||||| | ||| ||
Sbjct: 1314 gccgatgggccagttggagaagctgccttggaagaacctgtccgaccaccatctcgggac 1255

                                                        
Query: 531  gtagatatcggtggcgtcgggggacgtcccggtcggggaacatg 574
            |  ||| ||||||||||| ||||||||||  ||| |||||||||
Sbjct: 1254 gaggatgtcggtggcgtc-ggggacgtcctcgtcagggaacatg 1212



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>dbj|AK069392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014L10, full
            insert sequence
          Length = 1587

 Score =  139 bits (70), Expect = 1e-29
 Identities = 188/224 (83%), Gaps = 5/224 (2%)
 Strand = Plus / Minus

                                                                        
Query: 351  atacctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctcccc 410
            |||||||||||||||||||| |||||||||||||||||| |||||| | |||||||| ||
Sbjct: 1429 atacctgcaagataagctccatggacatagccattgtagcgctcgc-tcgtgtgctcacc 1371

                                                                        
Query: 411  ggtgaagtagacccgcccgccaaccggcgcccggagctggtcgtactcgtagcggttgac 470
            |||||| ||||| | |   ||||||||||||| ||||||||| |  ||||||||  ||||
Sbjct: 1370 ggtgaaatagactctc---ccaaccggcgccctgagctggtcatgttcgtagcgactgac 1314

                                                                        
Query: 471  gccgatgggccagttggagtaggagcccttgaagaatcggttggaccaccagcgcggcac 530
            ||||||||||||||||||| ||  ||| | |||||| | ||  |||||||| | ||| ||
Sbjct: 1313 gccgatgggccagttggagaagctgccttggaagaacctgtccgaccaccatctcgggac 1254

                                                        
Query: 531  gtagatatcggtggcgtcgggggacgtcccggtcggggaacatg 574
            |  ||| ||||||||||| ||||||||||  ||| |||||||||
Sbjct: 1253 gaggatgtcggtggcgtc-ggggacgtcctcgtcagggaacatg 1211



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 71/77 (92%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                           
Query: 348     tgtatacctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctc 407
               |||||||||||||||||| |||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 4848268 tgtatacctgcaagataacctccatggacatagccattgtagtactcgctt-gtgtgctc 4848210

                                
Query: 408     cccggtgaagtagaccc 424
                ||||||||||| ||||
Sbjct: 4848209 accggtgaagtaaaccc 4848193



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 119/142 (83%), Gaps = 1/142 (0%)
 Strand = Plus / Minus

                                                                           
Query: 444     gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 503
               ||||||||| || ||||||||||||||||| ||||||||||||||| ||| ||||||| |
Sbjct: 4848050 gagctggtcatattcgtagcggttgacgccaatgggccagttggagaaggtgcccttgta 4847991

                                                                           
Query: 504     gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcgggggacgtcccggt 563
               ||| | ||| |||||||| |  || |||  ||| || ||||||||  ||||||||| |||
Sbjct: 4847990 gaacctgtttgaccaccatcttgggacgaggatgtcagtggcgtc-agggacgtcctggt 4847932

                                     
Query: 564     cggggaacatgttgcgcagcac 585
               | ||||||||||| | ||||||
Sbjct: 4847931 cagggaacatgttcctcagcac 4847910



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>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16,
              complete sequence
          Length = 159092

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 71/77 (92%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                          
Query: 348    tgtatacctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctc 407
              |||||||||||||||||| |||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 147279 tgtatacctgcaagataacctccatggacatagccattgtagtactcgctt-gtgtgctc 147337

                               
Query: 408    cccggtgaagtagaccc 424
               ||||||||||| ||||
Sbjct: 147338 accggtgaagtaaaccc 147354



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 119/142 (83%), Gaps = 1/142 (0%)
 Strand = Plus / Plus

                                                                          
Query: 444    gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 503
              ||||||||| || ||||||||||||||||| ||||||||||||||| ||| ||||||| |
Sbjct: 147497 gagctggtcatattcgtagcggttgacgccaatgggccagttggagaaggtgcccttgta 147556

                                                                          
Query: 504    gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcgggggacgtcccggt 563
              ||| | ||| |||||||| |  || |||  ||| || ||||||||  ||||||||| |||
Sbjct: 147557 gaacctgtttgaccaccatcttgggacgaggatgtcagtggcgtc-agggacgtcctggt 147615

                                    
Query: 564    cggggaacatgttgcgcagcac 585
              | ||||||||||| | ||||||
Sbjct: 147616 cagggaacatgttcctcagcac 147637



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 71/77 (92%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                           
Query: 348     tgtatacctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctc 407
               |||||||||||||||||| |||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 4847483 tgtatacctgcaagataacctccatggacatagccattgtagtactcgctt-gtgtgctc 4847425

                                
Query: 408     cccggtgaagtagaccc 424
                ||||||||||| ||||
Sbjct: 4847424 accggtgaagtaaaccc 4847408



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 119/142 (83%), Gaps = 1/142 (0%)
 Strand = Plus / Minus

                                                                           
Query: 444     gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 503
               ||||||||| || ||||||||||||||||| ||||||||||||||| ||| ||||||| |
Sbjct: 4847265 gagctggtcatattcgtagcggttgacgccaatgggccagttggagaaggtgcccttgta 4847206

                                                                           
Query: 504     gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcgggggacgtcccggt 563
               ||| | ||| |||||||| |  || |||  ||| || ||||||||  ||||||||| |||
Sbjct: 4847205 gaacctgtttgaccaccatcttgggacgaggatgtcagtggcgtc-agggacgtcctggt 4847147

                                     
Query: 564     cggggaacatgttgcgcagcac 585
               | ||||||||||| | ||||||
Sbjct: 4847146 cagggaacatgttcctcagcac 4847125



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>emb|AJ304792.1|HVU304792 Hordeum vulgare bpao1 gene for flavin containing polyamine oxidase,
            exons 1-9
          Length = 2942

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 72/79 (91%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                        
Query: 351  atacctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctcccc 410
            ||||||| |||||||||||| |||||||| || ||||||||||||| |||||||||||||
Sbjct: 2711 atacctgaaagataagctccatggacataaccgttgtagtgctcgc-tggtgtgctcccc 2653

                               
Query: 411  ggtgaagtagacccgcccg 429
            ||||||||| |||| ||||
Sbjct: 2652 ggtgaagtaaaccctcccg 2634



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                        
Query: 444  gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 503
            |||||||||||| ||||||||||||||||||||||||||||||||| ||| |||| || |
Sbjct: 2490 gagctggtcgtattcgtagcggttgacgccgatgggccagttggagaaggtgcccctgta 2431

                                       
Query: 504  gaatcggttggaccaccagcgcggcac 530
            ||| | || ||||||||| || |||||
Sbjct: 2430 gaacctgtcggaccaccaccgtggcac 2404



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 64/69 (92%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                            
Query: 351      atacctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctcccc 410
                |||||||||||||||||||| |||||||||||||||||| |||||| | |||||||| ||
Sbjct: 12092784 atacctgcaagataagctccatggacatagccattgtagcgctcgc-tcgtgtgctcacc 12092842

                         
Query: 411      ggtgaagta 419
                |||||||||
Sbjct: 12092843 ggtgaagta 12092851



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 66/72 (91%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                            
Query: 351      atacctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctcccc 410
                |||||||||||||||||||| |||||||||||||||||| |||||| | |||||||| ||
Sbjct: 12113134 atacctgcaagataagctccatggacatagccattgtagcgctcgc-tcgtgtgctcacc 12113192

                            
Query: 411      ggtgaagtagac 422
                |||||| |||||
Sbjct: 12113193 ggtgaaatagac 12113204



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 92/109 (84%)
 Strand = Plus / Plus

                                                                            
Query: 444      gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 503
                ||||||||| |||||||||||  ||||||||||||||||||||||| ||  ||||  |||
Sbjct: 12092982 gagctggtcatactcgtagcgactgacgccgatgggccagttggagaagctgccccggaa 12093041

                                                                 
Query: 504      gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcgggg 552
                ||| | || ||||||||| | ||| |||  ||| |||||||||||||||
Sbjct: 12093042 gaacctgtcggaccaccatctcgggacgaggatgtcggtggcgtcgggg 12093090



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 107/131 (81%), Gaps = 1/131 (0%)
 Strand = Plus / Plus

                                                                            
Query: 444      gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 503
                ||||||||| |  ||||||||  ||||||||||||||||||||||| ||  ||| | |||
Sbjct: 12113376 gagctggtcatgttcgtagcgactgacgccgatgggccagttggagaagctgccttggaa 12113435

                                                                            
Query: 504      gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcgggggacgtcccggt 563
                ||| | ||  |||||||| | ||| |||  ||| ||||||||||| ||||||||||  ||
Sbjct: 12113436 gaacctgtccgaccaccatctcgggacgaggatgtcggtggcgtc-ggggacgtcctcgt 12113494

                           
Query: 564      cggggaacatg 574
                | |||||||||
Sbjct: 12113495 cagggaacatg 12113505



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>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1759_F09
          Length = 149501

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 64/69 (92%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                        
Query: 351  atacctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctcccc 410
            |||||||||||||||||||| |||||||||||||||||| |||||| | |||||||| ||
Sbjct: 4243 atacctgcaagataagctccatggacatagccattgtagcgctcgc-tcgtgtgctcacc 4301

                     
Query: 411  ggtgaagta 419
            |||||||||
Sbjct: 4302 ggtgaagta 4310



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 66/72 (91%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                         
Query: 351   atacctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctcccc 410
             |||||||||||||||||||| |||||||||||||||||| |||||| | |||||||| ||
Sbjct: 24593 atacctgcaagataagctccatggacatagccattgtagcgctcgc-tcgtgtgctcacc 24651

                         
Query: 411   ggtgaagtagac 422
             |||||| |||||
Sbjct: 24652 ggtgaaatagac 24663



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 92/109 (84%)
 Strand = Plus / Plus

                                                                        
Query: 444  gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 503
            ||||||||| |||||||||||  ||||||||||||||||||||||| ||  ||||  |||
Sbjct: 4441 gagctggtcatactcgtagcgactgacgccgatgggccagttggagaagctgccccggaa 4500

                                                             
Query: 504  gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcgggg 552
            ||| | || ||||||||| | ||| |||  ||| |||||||||||||||
Sbjct: 4501 gaacctgtcggaccaccatctcgggacgaggatgtcggtggcgtcgggg 4549



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 107/131 (81%), Gaps = 1/131 (0%)
 Strand = Plus / Plus

                                                                         
Query: 444   gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 503
             ||||||||| |  ||||||||  ||||||||||||||||||||||| ||  ||| | |||
Sbjct: 24835 gagctggtcatgttcgtagcgactgacgccgatgggccagttggagaagctgccttggaa 24894

                                                                         
Query: 504   gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcgggggacgtcccggt 563
             ||| | ||  |||||||| | ||| |||  ||| ||||||||||| ||||||||||  ||
Sbjct: 24895 gaacctgtccgaccaccatctcgggacgaggatgtcggtggcgtc-ggggacgtcctcgt 24953

                        
Query: 564   cggggaacatg 574
             | |||||||||
Sbjct: 24954 cagggaacatg 24964



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>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0564H06
          Length = 146823

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 64/69 (92%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                         
Query: 351   atacctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctcccc 410
             |||||||||||||||||||| |||||||||||||||||| |||||| | |||||||| ||
Sbjct: 27163 atacctgcaagataagctccatggacatagccattgtagcgctcgc-tcgtgtgctcacc 27221

                      
Query: 411   ggtgaagta 419
             |||||||||
Sbjct: 27222 ggtgaagta 27230



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 66/72 (91%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                         
Query: 351   atacctgcaagataagctccgtggacatagccattgtagtgctcgcttggtgtgctcccc 410
             |||||||||||||||||||| |||||||||||||||||| |||||| | |||||||| ||
Sbjct: 47513 atacctgcaagataagctccatggacatagccattgtagcgctcgc-tcgtgtgctcacc 47571

                         
Query: 411   ggtgaagtagac 422
             |||||| |||||
Sbjct: 47572 ggtgaaatagac 47583



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 92/109 (84%)
 Strand = Plus / Plus

                                                                         
Query: 444   gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 503
             ||||||||| |||||||||||  ||||||||||||||||||||||| ||  ||||  |||
Sbjct: 27361 gagctggtcatactcgtagcgactgacgccgatgggccagttggagaagctgccccggaa 27420

                                                              
Query: 504   gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcgggg 552
             ||| | || ||||||||| | ||| |||  ||| |||||||||||||||
Sbjct: 27421 gaacctgtcggaccaccatctcgggacgaggatgtcggtggcgtcgggg 27469



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 107/131 (81%), Gaps = 1/131 (0%)
 Strand = Plus / Plus

                                                                         
Query: 444   gagctggtcgtactcgtagcggttgacgccgatgggccagttggagtaggagcccttgaa 503
             ||||||||| |  ||||||||  ||||||||||||||||||||||| ||  ||| | |||
Sbjct: 47755 gagctggtcatgttcgtagcgactgacgccgatgggccagttggagaagctgccttggaa 47814

                                                                         
Query: 504   gaatcggttggaccaccagcgcggcacgtagatatcggtggcgtcgggggacgtcccggt 563
             ||| | ||  |||||||| | ||| |||  ||| ||||||||||| ||||||||||  ||
Sbjct: 47815 gaacctgtccgaccaccatctcgggacgaggatgtcggtggcgtc-ggggacgtcctcgt 47873

                        
Query: 564   cggggaacatg 574
             | |||||||||
Sbjct: 47874 cagggaacatg 47884



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>gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 genomic sequence, complete
             sequence
          Length = 106110

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                          
Query: 372   tggacatagccattgtagtgctcgcttggtgtgctccccggtgaa 416
             |||||||||||||||||||| |||||| |||||||| || |||||
Sbjct: 41460 tggacatagccattgtagtgttcgctt-gtgtgctcgcctgtgaa 41503



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                             
Query: 372      tggacatagccattgtagtgctcgcttggtgtgctccccggtgaa 416
                |||||||||||||||||||| |||||| |||||||| || |||||
Sbjct: 11026776 tggacatagccattgtagtgttcgctt-gtgtgctcgcctgtgaa 11026733



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                             
Query: 372      tggacatagccattgtagtgctcgcttggtgtgctccccggtgaa 416
                |||||||||||||||||||| |||||| |||||||| || |||||
Sbjct: 11033216 tggacatagccattgtagtgttcgctt-gtgtgctcgcctgtgaa 11033173



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>gb|AC110085.3| Homo sapiens BAC clone RP11-603P13 from 4, complete sequence
          Length = 80015

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 147   acatcaaattcttggggaaaa 167
             |||||||||||||||||||||
Sbjct: 19517 acatcaaattcttggggaaaa 19497



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>gb|AC161607.4| Mus musculus BAC clone RP23-152L11 from chromosome 16, complete sequence
          Length = 212274

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 33     gatcaattacaagaaattaca 53
              |||||||||||||||||||||
Sbjct: 130559 gatcaattacaagaaattaca 130539



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>emb|AL928639.5| Mouse DNA sequence from clone RP23-446O17 on chromosome 2, complete
             sequence
          Length = 177843

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 478   ggccagttggagtaggagccc 498
             |||||||||||||||||||||
Sbjct: 67336 ggccagttggagtaggagccc 67356



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>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06,
             complete sequence
          Length = 139139

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   gacccgcccgccaaccggcg 439
             ||||||||||||||||||||
Sbjct: 41732 gacccgcccgccaaccggcg 41751



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>emb|BX005412.17| Zebrafish DNA sequence from clone DKEY-23O4 in linkage group 16,
             complete sequence
          Length = 250962

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    atcaattacaagaaattaca 53
             ||||||||||||||||||||
Sbjct: 93586 atcaattacaagaaattaca 93605



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>ref|XM_627096.1| Cryptosporidium parvum Iowa II mannose-6-phosphate isomerase
           (cgd8_1920), partial mRNA
          Length = 1731

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  aattacaagaaattacatca 56
           ||||||||||||||||||||
Sbjct: 445 aattacaagaaattacatca 426



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 420      gacccgcccgccaaccggcg 439
                ||||||||||||||||||||
Sbjct: 27677174 gacccgcccgccaaccggcg 27677193



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>emb|BX248414.5| Zebrafish DNA sequence from clone CH211-236E8, complete sequence
          Length = 149603

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    atcaattacaagaaattaca 53
             ||||||||||||||||||||
Sbjct: 50641 atcaattacaagaaattaca 50622


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,740,549
Number of Sequences: 3902068
Number of extensions: 3740549
Number of successful extensions: 62146
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61921
Number of HSP's gapped (non-prelim): 186
length of query: 593
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 570
effective length of database: 17,143,297,704
effective search space: 9771679691280
effective search space used: 9771679691280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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