>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  274 bits (701), Expect(2) = 1e-92
 Identities = 134/135 (99%), Positives = 134/135 (99%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTRDD IGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG
Sbjct: 293 FYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 352

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
           STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL
Sbjct: 353 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 412

Query: 321 GDANQDAMKTGSFYG 277
           GDANQDAMKTGSFYG
Sbjct: 413 GDANQDAMKTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = 1e-92
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -1

Query: 229 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 116
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  226 bits (576), Expect(2) = 2e-72
 Identities = 104/135 (77%), Positives = 122/135 (90%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTR+D IGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV 
Sbjct: 303 FYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVS 362

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
             G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AAL
Sbjct: 363 EVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAAL 422

Query: 321 GDANQDAMKTGSFYG 277
           GDAN DA+K G+FYG
Sbjct: 423 GDANNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 2e-72
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -1

Query: 232 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 116
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  219 bits (557), Expect(2) = 1e-70
 Identities = 103/135 (76%), Positives = 119/135 (88%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTR+D IGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V 
Sbjct: 303 FYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVE 362

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
           S G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAAL
Sbjct: 363 SLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAAL 422

Query: 321 GDANQDAMKTGSFYG 277
           GDAN DA+  G+FYG
Sbjct: 423 GDANADAIGRGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 1e-70
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -1

Query: 229 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 116
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  218 bits (555), Expect(2) = 3e-69
 Identities = 101/135 (74%), Positives = 119/135 (88%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTR+D IGVC GIF+TD V  E VVK+VD FPGQSIDFFGALRARVY DEVRKWV 
Sbjct: 301 FYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVN 360

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
           S G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AAL
Sbjct: 361 SVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAAL 420

Query: 321 GDANQDAMKTGSFYG 277
           GDAN+DA+  G+F+G
Sbjct: 421 GDANKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 3e-69
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -1

Query: 229 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 122
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  242 bits (617), Expect = 9e-64
 Identities = 112/135 (82%), Positives = 126/135 (93%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTRDD +GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV 
Sbjct: 293 FYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVS 352

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
            TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AAL
Sbjct: 353 DTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAAL 412

Query: 321 GDANQDAMKTGSFYG 277
           GDAN DAMKTGSFYG
Sbjct: 413 GDANSDAMKTGSFYG 427

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  242 bits (617), Expect = 9e-64
 Identities = 112/135 (82%), Positives = 126/135 (93%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTR+D IGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG
Sbjct: 290 FYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVG 349

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
             G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AAL
Sbjct: 350 EIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAAL 409

Query: 321 GDANQDAMKTGSFYG 277
           G AN DAMKTG+FYG
Sbjct: 410 GQANDDAMKTGAFYG 424

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  229 bits (584), Expect = 6e-60
 Identities = 105/135 (77%), Positives = 124/135 (91%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTR+D IGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+ 
Sbjct: 303 FYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWIT 362

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
             G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AAL
Sbjct: 363 GVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAAL 422

Query: 321 GDANQDAMKTGSFYG 277
           GDAN DAM TG+FYG
Sbjct: 423 GDANSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  228 bits (582), Expect = 1e-59
 Identities = 104/134 (77%), Positives = 124/134 (92%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTR+D IGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV 
Sbjct: 299 FYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVS 358

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
            TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AAL
Sbjct: 359 ETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAAL 418

Query: 321 GDANQDAMKTGSFY 280
           G+AN+DAMKTGSF+
Sbjct: 419 GEANEDAMKTGSFF 432

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  228 bits (580), Expect = 2e-59
 Identities = 108/133 (81%), Positives = 122/133 (91%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTR+D IGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV 
Sbjct: 307 FYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVS 366

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
            TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AAL
Sbjct: 367 GTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAAL 426

Query: 321 GDANQDAMKTGSF 283
           GDAN DA+ TG+F
Sbjct: 427 GDANADAINTGNF 439

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  226 bits (576), Expect = 5e-59
 Identities = 107/131 (81%), Positives = 122/131 (93%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTR+D IGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV 
Sbjct: 302 FYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVS 361

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
            TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AAL
Sbjct: 362 GTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAAL 421

Query: 321 GDANQDAMKTG 289
           GDAN DA+ TG
Sbjct: 422 GDANADAINTG 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  226 bits (575), Expect = 6e-59
 Identities = 103/133 (77%), Positives = 122/133 (91%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTR+D IGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV 
Sbjct: 303 FYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVS 362

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
             G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AAL
Sbjct: 363 EVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAAL 422

Query: 321 GDANQDAMKTGSF 283
           GDANQDA+K G+F
Sbjct: 423 GDANQDAIKRGTF 435

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  222 bits (565), Expect = 9e-58
 Identities = 106/134 (79%), Positives = 117/134 (87%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTR+D IGVC GIF+TDNV  E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV 
Sbjct: 307 FYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVS 366

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
            TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AAL
Sbjct: 367 GTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAAL 426

Query: 321 GDANQDAMKTGSFY 280
           GDAN DA+  GSF+
Sbjct: 427 GDANADAINNGSFF 440

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  217 bits (553), Expect = 2e-56
 Identities = 96/134 (71%), Positives = 122/134 (91%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTRDD +GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+ 
Sbjct: 305 FYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWIS 364

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
             G++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AAL
Sbjct: 365 GVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAAL 424

Query: 321 GDANQDAMKTGSFY 280
           G+AN+DA+K+GSF+
Sbjct: 425 GNANEDAIKSGSFF 438

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  209 bits (531), Expect = 8e-54
 Identities = 93/134 (69%), Positives = 120/134 (89%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTR+D IGVCKGIF+TD V ++ +V++VD  PGQSIDFFGALRARVYDDEVRKW+ 
Sbjct: 307 FYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWIS 366

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
             G++++GK+LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AAL
Sbjct: 367 GVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAAL 426

Query: 321 GDANQDAMKTGSFY 280
           G+AN+DA+K+GSF+
Sbjct: 427 GNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  177 bits (450), Expect = 2e-44
 Identities = 81/110 (73%), Positives = 95/110 (86%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYWAPTR+D IG+C GIF+TD V  E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW  
Sbjct: 300 FYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAV 359

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 352
             G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 360 GVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  150 bits (378), Expect = 5e-36
 Identities = 73/120 (60%), Positives = 89/120 (74%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           +YW PTR+D IGVC GIFQ DNV    V  +VDTFPGQSIDFFGALRARVYDD VR+W+ 
Sbjct: 276 YYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWIT 335

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 322
            TG++ IG++LVN+R   V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 336 DTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  119 bits (299), Expect = 7e-27
 Identities = 52/114 (45%), Positives = 76/114 (66%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYW P RD+ +G+  GIF  D +S   V K+VD+FP QSIDFF ALR+R+YD+++R ++ 
Sbjct: 176 FYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIH 235

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 340
             G EN+  R+VNS +GP  F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 236 QVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  114 bits (285), Expect = 3e-25
 Identities = 51/114 (44%), Positives = 74/114 (64%)
 Frame = -2

Query: 681 FYWAPTRDDXIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVG 502
           FYW P RDD +G+  GIF  D +S   + ++VDTFP QSIDFF ALR+R+YD ++R ++ 
Sbjct: 176 FYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIH 235

Query: 501 STGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 340
             G E I  R+VNS + P  F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 236 KVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = -2

Query: 591 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 412
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -2

Query: 447 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 292
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 291 GSFYG*KILHTHPPSLAA 238
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 508 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 633
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = -2

Query: 594 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 415
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 414 KLLEYGHMLVQEQDNVKRV 358
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = -2

Query: 447 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 292
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 291 GSFYG*KILHTHPPSLAA 238
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 344 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 448
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
            (LeuRS)
          Length = 868

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 4/137 (2%)
 Frame = +1

Query: 280  VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXXEGHGPVP 459
            VEG+  HR L  + +   AHVG     +LDI  L DE   V            +  G   
Sbjct: 671  VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728

Query: 460  RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE- 630
            + +  +A V        +  + V+  + Q+T +   L  EG++ +   L  +T  +  E 
Sbjct: 729  KFNTAVAQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHEL 780

Query: 631  -DTLADTDTVVTGGSPV 678
               L   + V+  G PV
Sbjct: 781  WTQLGHNEPVIDAGWPV 797

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -2

Query: 510 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 403
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,487,303
Number of Sequences: 219361
Number of extensions: 1900209
Number of successful extensions: 5799
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5796
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)