Clone Name	rbaal39a05
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full ...	977	0.0
2	gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full ...	942	0.0
3	gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full i...	940	0.0
4	dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clon...	531	e-148
5	dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clon...	531	e-148
6	gb|AY103957.1| Zea mays PCO116832 mRNA sequence	500	e-138
7	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	222	1e-54
8	dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic D...	222	1e-54
9	emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein	180	4e-42
10	ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent pepti...	172	9e-40
11	emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease	172	9e-40
12	gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH pr...	172	9e-40
13	gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH pr...	172	9e-40
14	dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH prot...	172	9e-40
15	ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-d...	151	3e-33
16	gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, comp...	151	3e-33
17	emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial	149	1e-32
18	emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Co...	133	8e-28
19	gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, comple...	131	3e-27
20	gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genom...	98	4e-17
21	dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	96	2e-16
22	gb|DQ339462.1| Vitis pseudoreticulata ATPase mRNA, complete cds	88	4e-14
23	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	50	0.009
24	dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic D...	50	0.009
25	dbj|AK068431.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.009
26	dbj|AK060394.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.009
27	emb|AL355537.11| Human DNA sequence from clone RP11-442O18 on ch...	44	0.54
28	gb|AC162693.5| Mus musculus chromosome 15, clone RP24-89G21, com...	42	2.1
29	gb|AC021667.21|AC021667 Mus musculus, clone RP23-304J12, complet...	42	2.1
30	gb|BT016970.1| Zea mays clone E04912707E08.c mRNA sequence	40	8.4
31	gb|AC009395.7| Drosophila melanogaster clone BACR01D01, complete...	40	8.4
32	gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome...	40	8.4
33	gb|AE009134.1| Agrobacterium tumefaciens str. C58 circular chrom...	40	8.4
34	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	40	8.4
35	gb|AC130218.4| Mus musculus BAC clone RP23-121N18 from chromosom...	40	8.4
36	gb|AY094953.1| Drosophila melanogaster RH69586 full insert cDNA	40	8.4
37	gb|AC144484.5| Medicago truncatula clone mth2-30o16, complete se...	40	8.4
38	gb|AC152818.17| Medicago truncatula clone mth2-85g12, complete s...	40	8.4
39	emb|AL513542.11| Human DNA sequence from clone RP11-129J12 on ch...	40	8.4
40	emb|AL353719.10| Human DNA sequence from clone RP11-85A1 on chro...	40	8.4
41	emb|AL096773.6|HS1000E10 Human DNA sequence from clone RP5-1000E...	40	8.4
42	gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom...	40	8.4
43	gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionop...	40	8.4
44	emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4,...	40	8.4
45	ref|NM_169826.1| Drosophila melanogaster CG31224-RA (CG31224), mRNA	40	8.4
46	ref|NM_078959.3| Drosophila melanogaster Peroxiredoxin 2540 CG11...	40	8.4
47	gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome	40	8.4
48	gb|AY075377.1| Drosophila melanogaster LD06123 full length cDNA	40	8.4
49	gb|AY070952.1| Drosophila melanogaster RE05093 full length cDNA	40	8.4
50	gb|AC008632.6|AC008632 Homo sapiens chromosome 5 clone CTB-164N1...	40	8.4
51	gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence	40	8.4
52	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	40	8.4
53	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	40	8.4
54	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	40	8.4
55	gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, r...	40	8.4
56	gb|AC007812.6|AC007812 Drosophila melanogaster, chromosome 3R, r...	40	8.4
57	gb|AC008663.6|AC008663 Homo sapiens chromosome 5 clone CTB-33O18...	40	8.4
58	gb|BT003589.1| Drosophila melanogaster LD03662 full insert cDNA	40	8.4
59	dbj|AP003520.3| Oryza sativa (japonica cultivar-group) genomic D...	40	8.4
60	gb|AC140071.4| Mus musculus BAC clone RP23-394K8 from 3, complet...	40	8.4
61	emb|CR450802.8| Zebrafish DNA sequence from clone CH211-197I12 i...	40	8.4
62	emb|AL772158.6| Zebrafish DNA sequence from clone CH211-128N21 i...	40	8.4
63	emb|BX005362.6| Zebrafish DNA sequence from clone CH211-159C12 i...	40	8.4
64	gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61...	40	8.4
65	gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21...	40	8.4
66	dbj|AB100244.1| Penicillium camemberti pyrG gene for orotidine-5...	40	8.4
67	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	40	8.4
68	emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa...	40	8.4
69	emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chro...	40	8.4
70	gb|CP000036.1| Shigella boydii Sb227, complete genome	40	8.4
71	gb|CP000038.1| Shigella sonnei Ss046, complete genome	40	8.4

---

>gb|BT009457.1| Triticum aestivum clone wlp1c.pk007.f6:fis, full insert mRNA sequence
          Length = 1556

 Score =  977 bits (493), Expect = 0.0
 Identities = 593/622 (95%), Gaps = 7/622 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    tttttacaaggaactatacaaacatgtttgcaaaaacaacattttt-actagatcaatgt 59
            ||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||
Sbjct: 1488 tttttacaaggaactatacaaacatgtttgcgaaaagaacattttttactagatcaatgt 1429

                                                                        
Query: 60   ggttcctacaagctggaccctcgtataaccgccgaaaa-catacagggcatg----acgg 114
            |||||||||||| ||||||||||||||| | || |||| ||||||||||| |    ||  
Sbjct: 1428 ggttcctacaagttggaccctcgtataatcaccaaaaaacatacagggcacgcacgacaa 1369

                                                                        
Query: 115  ggcgacttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctc 174
            | ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1368 gtcgacttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctc 1309

                                                                        
Query: 175  cccgtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtg 234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1308 cccgtccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtg 1249

                                                                        
Query: 235  ggtgttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggc 294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1248 ggtgttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggc 1189

                                                                        
Query: 295  atctacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaa 354
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1188 gtctacgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaa 1129

                                                                        
Query: 355  gaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaa 414
            ||||||||||||||||||||| || ||||| |||||||| |||||||| |||||||||||
Sbjct: 1128 gaaagggtttccaccagatgatccgatcgcgacttgcccaatcttcttactgaacccaaa 1069

                                                                        
Query: 415  tctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagt 474
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1068 tctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcactggatgccccagt 1009

                                                                        
Query: 475  tgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagc 534
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 tgtcacattgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagc 949

                                                                        
Query: 535  catttggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttgg 594
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 948  catttggttctctaggtagctcctgctgtacagtccagactcaagcctctcttcgcttgg 889

                                  
Query: 595  agcaaaagaacgtgagaccacc 616
            ||| |||||||||||| |||||
Sbjct: 888  agc-aaagaacgtgagcccacc 868

---

>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA
           sequence
          Length = 890

 Score =  942 bits (475), Expect = 0.0
 Identities = 585/618 (94%), Gaps = 9/618 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttttacaaggaa-ctatacaaacatgtttgcaaaaacaacatttttactagatcaatgt 59
           ||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 814 tttttacaaggaaactatacaaacatgtttgcgaaaagaacatttttactagatcaatgt 755

                                                                       
Query: 60  ggttcctacaagctggaccctcgtataaccgccgaaaa-catacagggcatgacggggcg 118
           |||||||||||| ||||||||||| ||| | ||||||| ||||||||      || |  |
Sbjct: 754 ggttcctacaagttggaccctcgtgtaatcaccgaaaaacatacagg------cgagttg 701

                                                                       
Query: 119 acttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccg 178
           ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 700 acttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctccccg 641

                                                                       
Query: 179 tccacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtg 238
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tccacggtctccttctcgatgaggaggttggcgagcctgtggaggatgtcgatgtgggtg 581

                                                                       
Query: 239 ttgatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatct 298
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 580 ttgatgatctgcgtcgcgcgcgagtaggccgtctccacgagttccctgacctcggcgtct 521

                                                                       
Query: 299 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 acgatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaa 461

                                                                       
Query: 359 gggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctt 418
           |||||||||||||||||||| || || |||||||| |||||||||||||||||||| |||
Sbjct: 460 gggtttccaccagatgacccgatggcgacttgcccaatcttcttgctgaacccaaacctt 401

                                                                       
Query: 419 tcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtc 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 400 tcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccggttgtc 341

                                                                       
Query: 479 acgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatt 538
           || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 acattgtcttgcccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatt 281

                                                                       
Query: 539 tggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagca 598
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 280 tggttctctaggtagctcctgctgtacagcccagactcgagcctctcttcgcttggagc- 222

                             
Query: 599 aaagaacgtgagaccacc 616
           |||||||||||| |||||
Sbjct: 221 aaagaacgtgagcccacc 204

---

>gb|BT009112.1| Triticum aestivum clone wl1.pk0008.c2:fis, full insert mRNA
           sequence
          Length = 654

 Score =  940 bits (474), Expect = 0.0
 Identities = 554/580 (95%), Gaps = 3/580 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttttacaaggaactatacaaacatgtttgcaaaaacaacatttttactagatcaatgtg 60
           |||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||
Sbjct: 580 tttttacaaggaactatacaaacatgtttgcggaaagaacatttttactagatcaatgtg 521

                                                                       
Query: 61  gttcctacaagctggaccctcgtataaccgccgaaaacatacagggcatgacggggcgac 120
           ||||||||||  ||||||||||||||| | | ||||||||||| |||| |||  | ||||
Sbjct: 520 gttcctacaacttggaccctcgtataatcacggaaaacatacaaggcacgacaagtcgac 461

                                                                       
Query: 121 ttatgcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtc 180
           ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ttatgcgacgaacagctctgcctgcccgtcgatgaagaggctcatgaactcctccccgtc 401

                                                                       
Query: 181 cacggtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 400 cacggtctccttctcgatcaggaggttggcgagcctgtggaggatatcgatgtgggtgtt 341

                                                                       
Query: 241 gatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gatgatctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctac 281

                                                                       
Query: 301 gatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gatgtccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagg 221

                                                                       
Query: 361 gttt---ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatct 417
           ||||   |||||||||||||| || || |||||||| |||||||||||||||||||||||
Sbjct: 220 gtttccaccaccagatgacccgattgcgacttgcccaatcttcttgctgaacccaaatct 161

                                                                       
Query: 418 ttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgt 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgt 101

                                                                       
Query: 478 cacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccat 537
           ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 100 cacattgtcttggccaaagataacctcctcggcaaccctgccaccaagtgccacagccat 41

                                                   
Query: 538 ttggttctctaggtagctcctgctgtacagtccagactcg 577
           ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 40  ttggttctctaggtagctcctgctgtatagtccagactcg 1

---

>dbj|AK065019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F19, full
            insert sequence
          Length = 2378

 Score =  531 bits (268), Expect = e-148
 Identities = 424/476 (89%)
 Strand = Plus / Minus

                                                                        
Query: 125  gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 184
            |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 2093 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 2034

                                                                        
Query: 185  gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 244
            ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 2033 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1974

                                                                        
Query: 245  atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 304
            |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 1973 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 1914

                                                                        
Query: 305  tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 364
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1913 tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 1854

                                                                        
Query: 365  ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 424
            ||||||| |   |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1853 ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 1794

                                                                        
Query: 425  atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 484
            |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || 
Sbjct: 1793 atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 1734

                                                                        
Query: 485  tcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttc 544
            |||||||||||||||||||| ||||||||||| |||||||| || || ||||||||||||
Sbjct: 1733 tcttggccaaagatcacctcttcggcaacccttccaccaagagctacggccatttggttc 1674

                                                                    
Query: 545  tctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaa 600
            |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 1673 tctaggtagctcctgctgtacaatccagactcaagcctctcctcgcttggagcaaa 1618

---

>dbj|AK061771.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C10, full
            insert sequence
          Length = 1325

 Score =  531 bits (268), Expect = e-148
 Identities = 424/476 (89%)
 Strand = Plus / Minus

                                                                        
Query: 125  gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 184
            |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 1149 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 1090

                                                                        
Query: 185  gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 244
            ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 1089 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 1030

                                                                        
Query: 245  atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 304
            |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 1029 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 970

                                                                        
Query: 305  tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 364
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 969  tccgcggtggccatcgagtagtccttctggctcgacatctgctggcccaagaaaggattt 910

                                                                        
Query: 365  ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 424
            ||||||| |   |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 909  ccaccaggtccaccaatcgcaacttgcccgatcttcttgctgaatccaaatctttcaacc 850

                                                                        
Query: 425  atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 484
            |||||||| || |||||||| |||||||| || ||| |||| |||||||||||||| || 
Sbjct: 849  atttgtcttgcaacacgtgaaacctgcataaaatcgttggaggccccagttgtcacattt 790

                                                                        
Query: 485  tcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttc 544
            |||||||||||||||||||| ||||||||||| |||||||| || || ||||||||||||
Sbjct: 789  tcttggccaaagatcacctcttcggcaacccttccaccaagagctacggccatttggttc 730

                                                                    
Query: 545  tctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaa 600
            |||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 729  tctaggtagctcctgctgtacaatccagactcaagcctctcctcgcttggagcaaa 674

---

>gb|AY103957.1| Zea mays PCO116832 mRNA sequence
          Length = 1820

 Score =  500 bits (252), Expect = e-138
 Identities = 420/476 (88%)
 Strand = Plus / Minus

                                                                        
Query: 125  gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 184
            |||||||||||||| ||||| ||||| ||||| | |||||||||||||||||||||||||
Sbjct: 1445 gcgacaaacagctcggcctggccgtcaatgaacaagctcatgaactcctccccgtccacg 1386

                                                                        
Query: 185  gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 244
            |||||||||||||||||||| | ||||||| ||||||||||||||||||| ||| |||| 
Sbjct: 1385 gtctccttctcgatcaggagctgggcgagcttgtggaggatgtcgatgtgcgtggtgatt 1326

                                                                        
Query: 245  atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 304
            |||||| | || |  ||||||||| |||||||||||||||| |||||||| || || |  
Sbjct: 1325 atctgccttgctctagagtaggccttctccacgagttccctcacctcggcgtccacaaca 1266

                                                                        
Query: 305  tccgccgtggccatcgagtagtccttctggctcgacatctgctggcccaagaaagggttt 364
            ||||| || ||||| ||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 1265 tccgctgttgccatagagtagtccttctggcttgacatctgttgccccaagaaagggttt 1206

                                                                        
Query: 365  ccaccagatgacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaacc 424
            ||||| | |  ||| ||||||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1205 ccacccggtcccccgatcgcaacttggccgatcttcttactgaatccaaatctttcgacc 1146

                                                                        
Query: 425  atttgtctggcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttg 484
            || || || ||||||||||| || |||||||||||| |||| || || ||||||||||||
Sbjct: 1145 atctgccttgcgacacgtgacacttgcatgaagtcgttggaagctcctgttgtcacgttg 1086

                                                                        
Query: 485  tcttggccaaagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttc 544
            ||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||
Sbjct: 1085 tcttggccaaagatcacctcctcagcaaccctgccaccaagggctacagccatttggttc 1026

                                                                    
Query: 545  tctaggtagctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaa 600
            || || |||||||||||||||| |||||| || ||||| |||||||||||||||||
Sbjct: 1025 tcaagatagctcctgctgtacaatccagattctagcctttcttcgcttggagcaaa 970



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   atgtggttcctacaagctgg 75
            ||||||||||||||||||||
Sbjct: 1545 atgtggttcctacaagctgg 1526

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  222 bits (112), Expect = 1e-54
 Identities = 160/176 (90%)
 Strand = Plus / Plus

                                                                            
Query: 343      ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 402
                |||||||||||||||||| |||||||||| |   ||||||||||||||||||||||||||
Sbjct: 30359326 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 30359385

                                                                            
Query: 403      gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 462
                |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| |
Sbjct: 30359386 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 30359445

                                                                        
Query: 463      ggatgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgc 518
                ||| |||||||||||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 30359446 ggaggccccagttgtcacattttcttggccaaagatcacctcttcggcaaccctgc 30359501



 Score =  210 bits (106), Expect = 4e-51
 Identities = 193/222 (86%)
 Strand = Plus / Plus

                                                                            
Query: 125      gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 184
                |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 30354728 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 30354787

                                                                            
Query: 185      gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 244
                ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 30354788 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 30354847

                                                                            
Query: 245      atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 304
                |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 30354848 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 30354907

                                                          
Query: 305      tccgccgtggccatcgagtagtccttctggctcgacatctgc 346
                ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 30354908 tccgcggtggccatcgagtagtccttctggctcgacatctgc 30354949



 Score =  117 bits (59), Expect = 4e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                            
Query: 518      ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 577
                |||||||| || || |||||||||||||||||||||||||||||||||| ||||||||| 
Sbjct: 30359590 ccaccaagagctacggccatttggttctctaggtagctcctgctgtacaatccagactca 30359649

                                       
Query: 578      agcctctcttcgcttggagcaaa 600
                |||||||| ||||||||||||||
Sbjct: 30359650 agcctctcctcgcttggagcaaa 30359672



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 23       catgtttgcaaaaacaacat 42
                ||||||||||||||||||||
Sbjct: 15678432 catgtttgcaaaaacaacat 15678451

---

>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0548E04
          Length = 138037

 Score =  222 bits (112), Expect = 1e-54
 Identities = 160/176 (90%)
 Strand = Plus / Plus

                                                                          
Query: 343    ctgctggcccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttctt 402
              |||||||||||||||||| |||||||||| |   ||||||||||||||||||||||||||
Sbjct: 105921 ctgctggcccaagaaaggatttccaccaggtccaccaatcgcaacttgcccgatcttctt 105980

                                                                          
Query: 403    gctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgct 462
              |||||| ||||||||||||||||||||||| || |||||||| |||||||| || ||| |
Sbjct: 105981 gctgaatccaaatctttcaaccatttgtcttgcaacacgtgaaacctgcataaaatcgtt 106040

                                                                      
Query: 463    ggatgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgc 518
              ||| |||||||||||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 106041 ggaggccccagttgtcacattttcttggccaaagatcacctcttcggcaaccctgc 106096



 Score =  210 bits (106), Expect = 4e-51
 Identities = 193/222 (86%)
 Strand = Plus / Plus

                                                                          
Query: 125    gcgacaaacagctccgcctgcccgtcgatgaagaggctcatgaactcctccccgtccacg 184
              |||||||||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 101323 gcgacaaacaactctgcctgaccgtcgatgaacaggctcatgaactcttccccgtccacc 101382

                                                                          
Query: 185    gtctccttctcgatcaggaggttggcgagcctgtggaggatgtcgatgtgggtgttgatg 244
              ||||||||||| ||||| || |  || ||| ||||||||||||||||||| ||  |||||
Sbjct: 101383 gtctccttctccatcagaagctgagcaagcttgtggaggatgtcgatgtgtgtcgtgatg 101442

                                                                          
Query: 245    atctgcgtcgcccgcgagtaggccgtctccacgagttccctgacctcggcatctacgatg 304
              |||||||| || |  ||||||||| |||||||||| ||||| ||||| ||||| || |  
Sbjct: 101443 atctgcgttgctcttgagtaggccttctccacgagctccctcacctcagcatccacaaca 101502

                                                        
Query: 305    tccgccgtggccatcgagtagtccttctggctcgacatctgc 346
              ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 101503 tccgcggtggccatcgagtagtccttctggctcgacatctgc 101544



 Score =  117 bits (59), Expect = 4e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                          
Query: 518    ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 577
              |||||||| || || |||||||||||||||||||||||||||||||||| ||||||||| 
Sbjct: 106185 ccaccaagagctacggccatttggttctctaggtagctcctgctgtacaatccagactca 106244

                                     
Query: 578    agcctctcttcgcttggagcaaa 600
              |||||||| ||||||||||||||
Sbjct: 106245 agcctctcctcgcttggagcaaa 106267

---

>emb|X90472.1|CAATPASE C.annuum mRNA for ATPase protein
          Length = 1989

 Score =  180 bits (91), Expect = 4e-42
 Identities = 251/303 (82%), Gaps = 1/303 (0%)
 Strand = Plus / Minus

                                                                        
Query: 314  gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 373
            ||||| ||||||||||||||| | |||||||| ||||| | |||||||||||| |||  |
Sbjct: 1864 gccatggagtagtccttctgggttgacatctgttggcctaggaaagggtttcctccacct 1805

                                                                        
Query: 374  gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 433
               || || |||||||| || ||||| |||||||| || ||||| |||||||| || || 
Sbjct: 1804 cctccgatggcaacttggcctatctttttgctgaaacctaatctctcaaccatctgcctc 1745

                                                                        
Query: 434  gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggcca 493
            || || ||||| || |||||||| ||  | ||||| ||||| || ||||||||||  |||
Sbjct: 1744 gccactcgtgaaacttgcatgaaatcattagatgcgccagtggttacgttgtcttctcca 1685

                                                                        
Query: 494  aagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtag 553
            || || |||||||| |||||||| ||||||||||| || |||||||| ||||||||||||
Sbjct: 1684 aaaataacctcctcagcaacccttccaccaagtgcaactgccatttgattctctaggtag 1625

                                                                        
Query: 554  ctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaaagaacgtgagacc 613
            |||||||||||||| || ||||| || || |||||||| || || |||||| ||||||||
Sbjct: 1624 ctcctgctgtacaggcctgactcaagtctttcttcgctgggggc-aaagaaggtgagacc 1566

               
Query: 614  acc 616
            |||
Sbjct: 1565 acc 1563

---

>ref|NM_103909.3| Arabidopsis thaliana FTSH1; ATP-dependent peptidase/ ATPase/
            metallopeptidase AT1G50250 (FTSH1) mRNA, complete cds
          Length = 2473

 Score =  172 bits (87), Expect = 9e-40
 Identities = 186/219 (84%)
 Strand = Plus / Minus

                                                                        
Query: 383  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 442
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 2022 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1963

                                                                        
Query: 443  gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 502
            || ||||||||||| ||  | ||||| ||||| ||||| || || |  ||||||||||||
Sbjct: 1962 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1903

                                                                        
Query: 503  tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 562
            ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1902 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1843

                                                   
Query: 563  tacagtccagactcgagcctctcttcgcttggagcaaaa 601
            |||| ||||||||| || || ||||||||||||||||||
Sbjct: 1842 tacaatccagactcaagtctttcttcgcttggagcaaaa 1804



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 146  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 204
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2259 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2201

---

>emb|X99808.1|ATFTSH A.thaliana mRNA for chloroplast FtsH protease
          Length = 2447

 Score =  172 bits (87), Expect = 9e-40
 Identities = 186/219 (84%)
 Strand = Plus / Minus

                                                                        
Query: 383  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 442
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 2020 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1961

                                                                        
Query: 443  gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 502
            || ||||||||||| ||  | ||||| ||||| ||||| || || |  ||||||||||||
Sbjct: 1960 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1901

                                                                        
Query: 503  tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 562
            ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1900 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1841

                                                   
Query: 563  tacagtccagactcgagcctctcttcgcttggagcaaaa 601
            |||| ||||||||| || || ||||||||||||||||||
Sbjct: 1840 tacaatccagactcaagtctttcttcgcttggagcaaaa 1802



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 146  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 204
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2257 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2199

---

>gb|AY123034.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250)
            mRNA, complete cds
          Length = 2182

 Score =  172 bits (87), Expect = 9e-40
 Identities = 186/219 (84%)
 Strand = Plus / Minus

                                                                        
Query: 383  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 442
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 1889 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1830

                                                                        
Query: 443  gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 502
            || ||||||||||| ||  | ||||| ||||| ||||| || || |  ||||||||||||
Sbjct: 1829 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1770

                                                                        
Query: 503  tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 562
            ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1769 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1710

                                                   
Query: 563  tacagtccagactcgagcctctcttcgcttggagcaaaa 601
            |||| ||||||||| || || ||||||||||||||||||
Sbjct: 1709 tacaatccagactcaagtctttcttcgcttggagcaaaa 1671



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 146  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 204
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2126 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2068

---

>gb|AY091095.1| Arabidopsis thaliana putative chloroplast FtsH protease (At1g50250)
            mRNA, complete cds
          Length = 2452

 Score =  172 bits (87), Expect = 9e-40
 Identities = 186/219 (84%)
 Strand = Plus / Minus

                                                                        
Query: 383  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 442
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 1985 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1926

                                                                        
Query: 443  gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 502
            || ||||||||||| ||  | ||||| ||||| ||||| || || |  ||||||||||||
Sbjct: 1925 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1866

                                                                        
Query: 503  tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 562
            ||||| |||||||| || |||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1865 tcctctgcaacccttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1806

                                                   
Query: 563  tacagtccagactcgagcctctcttcgcttggagcaaaa 601
            |||| ||||||||| || || ||||||||||||||||||
Sbjct: 1805 tacaatccagactcaagtctttcttcgcttggagcaaaa 1767



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 146  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 204
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2222 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2164

---

>dbj|AB017480.2| Nicotiana tabacum mRNA for chloroplast FtsH protease, complete cds
          Length = 2447

 Score =  172 bits (87), Expect = 9e-40
 Identities = 237/287 (82%)
 Strand = Plus / Minus

                                                                        
Query: 314  gccatcgagtagtccttctggctcgacatctgctggcccaagaaagggtttccaccagat 373
            ||||| |||||||| |||||| | |||||||| || || | |||||| ||||| |||  |
Sbjct: 1952 gccatggagtagtctttctgggttgacatctgttgacctaggaaaggatttcctccacct 1893

                                                                        
Query: 374  gacccaatcgcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctg 433
               ||||| |||||||| || ||||| ||||||||||| ||||| |||||||| || || 
Sbjct: 1892 cctccaatggcaacttgtccaatctttttgctgaaccctaatctctcaaccatctgcctt 1833

                                                                        
Query: 434  gcgacacgtgagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggcca 493
            || || ||||| || |||||||| ||| | |||||||||||||| ||||| ||||| |||
Sbjct: 1832 gccactcgtgaaacttgcatgaaatcgttagatgccccagttgttacgttatcttgtcca 1773

                                                                        
Query: 494  aagatcacctcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtag 553
            || || |||||||| ||||||||  |||||||||| || |||||||| ||||||||||||
Sbjct: 1772 aaaataacctcctcagcaaccctttcaccaagtgcaactgccatttgattctctaggtag 1713

                                                           
Query: 554  ctcctgctgtacagtccagactcgagcctctcttcgcttggagcaaa 600
            |||||||||||||  || ||||| || || |||||||| || |||||
Sbjct: 1712 ctcctgctgtacaagcccgactcaagtctttcttcgctgggggcaaa 1666

---

>ref|NM_123592.2| Arabidopsis thaliana VAR1 (VARIEGATED 1); ATP-dependent peptidase/
            ATPase/ metallopeptidase AT5G42270 (VAR1) mRNA, complete
            cds
          Length = 3058

 Score =  151 bits (76), Expect = 3e-33
 Identities = 205/248 (82%)
 Strand = Plus / Minus

                                                                        
Query: 350  cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 409
            ||||||||||||||||| || | |   ||||  |||||||| || ||||| |||||||||
Sbjct: 2059 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 2000

                                                                        
Query: 410  ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 469
            || ||||| ||||||||||| |  || || || || || |||||||| ||  | ||||| 
Sbjct: 1999 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 1940

                                                                        
Query: 470  ccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgcc 529
            || |||||||| || || |  |||||||||||||| || |||||||| ||||||||||| 
Sbjct: 1939 ccggttgtcacattctcgtctccaaagatcacctcttctgcaacccttccaccaagtgca 1880

                                                                        
Query: 530  acagccatttggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcg 589
            ||||||||||||||||| |||||||| ||||| |||| ||| ||||| ||||||||||||
Sbjct: 1879 acagccatttggttctcaaggtagcttctgctatacaatccggactctagcctctcttcg 1820

                    
Query: 590  cttggagc 597
            || |||||
Sbjct: 1819 ctaggagc 1812

---

>gb|AY126987.1| Arabidopsis thaliana AT5g42270/K5J14_7 mRNA, complete cds
          Length = 2311

 Score =  151 bits (76), Expect = 3e-33
 Identities = 205/248 (82%)
 Strand = Plus / Minus

                                                                        
Query: 350  cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 409
            ||||||||||||||||| || | |   ||||  |||||||| || ||||| |||||||||
Sbjct: 1985 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 1926

                                                                        
Query: 410  ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 469
            || ||||| ||||||||||| |  || || || || || |||||||| ||  | ||||| 
Sbjct: 1925 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 1866

                                                                        
Query: 470  ccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccaccaagtgcc 529
            || |||||||| || || |  |||||||||||||| || |||||||| ||||||||||| 
Sbjct: 1865 ccggttgtcacattctcgtctccaaagatcacctcttctgcaacccttccaccaagtgca 1806

                                                                        
Query: 530  acagccatttggttctctaggtagctcctgctgtacagtccagactcgagcctctcttcg 589
            ||||||||||||||||| |||||||| ||||| |||| ||| ||||| ||||||||||||
Sbjct: 1805 acagccatttggttctcaaggtagcttctgctatacaatccggactctagcctctcttcg 1746

                    
Query: 590  cttggagc 597
            || |||||
Sbjct: 1745 ctaggagc 1738

---

>emb|Y12780.1|ATAAAA A.thaliana mRNA for ATPase, partial
          Length = 2190

 Score =  149 bits (75), Expect = 1e-32
 Identities = 183/219 (83%)
 Strand = Plus / Minus

                                                                        
Query: 383  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 442
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 1685 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 1626

                                                                        
Query: 443  gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 502
            || ||||||||||| ||  | ||||| ||||| ||||| || || |  ||||||||||||
Sbjct: 1625 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 1566

                                                                        
Query: 503  tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 562
            ||||| |||||||| || |||||||    ||||||||| ||||| ||||||||||| |||
Sbjct: 1565 tcctctgcaacccttccgccaagtgaacaagccatttgattctcaaggtagctcctactg 1506

                                                   
Query: 563  tacagtccagactcgagcctctcttcgcttggagcaaaa 601
            |||| ||||||||| || || ||||||||||||||||||
Sbjct: 1505 tacaatccagactcaagtctttcttcgcttggagcaaaa 1467

---

>emb|BX815046.1|CNS0AE0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS28ZC04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2428

 Score =  133 bits (67), Expect = 8e-28
 Identities = 181/219 (82%)
 Strand = Plus / Minus

                                                                        
Query: 383  gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 442
            |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || | ||| 
Sbjct: 2021 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccaaacga 1962

                                                                        
Query: 443  gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 502
            || ||||||||||| ||  | ||||| ||||| ||||  || || |  ||||||||||||
Sbjct: 1961 gacacctgcatgaaatcatttgatgctccagtcgtcaaattctcatccccaaagatcacc 1902

                                                                        
Query: 503  tcctcggcaaccctgccaccaagtgccacagccatttggttctctaggtagctcctgctg 562
            ||||| | ||  || || |||||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 1901 tcctctgaaaaacttccgccaagtgcaacagccatttgattctcaaggtagctcctactg 1842

                                                   
Query: 563  tacagtccagactcgagcctctcttcgcttggagcaaaa 601
            |||| ||||||||| || || ||||||||||||||||||
Sbjct: 1841 tacaatccagactcaagtctttcttcgcttggagcaaaa 1803



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 146  ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 204
            ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 2258 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 2200

---

>gb|AF332134.1| Medicago sativa FtsH protease (FtsH) mRNA, complete cds; chloroplast
            gene for chloroplast product
          Length = 2352

 Score =  131 bits (66), Expect = 3e-27
 Identities = 180/216 (83%), Gaps = 4/216 (1%)
 Strand = Plus / Minus

                                                                        
Query: 401  ttgctgaacccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcg 460
            ||||||||||||||||| |||||||| ||||| || || ||||| || ||||||||||| 
Sbjct: 1893 ttgctgaacccaaatctctcaaccatctgtcttgccactcgtgaaacttgcatgaagtca 1834

                                                                        
Query: 461  ctggatgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgcca 520
             | || |||||||| || || || || |||||||| |   |||| ||||||||||| || 
Sbjct: 1833 tttgacgccccagtggtgacattatcctggccaaaaa---cctcttcggcaacccttcct 1777

                                                                        
Query: 521  ccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcgagc 580
            |||||||| || ||||| || ||||| | |||||| || ||||||| ||||||||| |||
Sbjct: 1776 ccaagtgcaaccgccatctgattctccaagtagcttctactgtacaatccagactcaagc 1717

                                                
Query: 581  ctctcttcgcttggagcaaaagaacgtgagaccacc 616
            ||||||||||| ||||||||| || |||||||||||
Sbjct: 1716 ctctcttcgctaggagcaaaa-aaggtgagaccacc 1682

---

>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete
             sequence
          Length = 100975

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                         
Query: 521   ccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcgagc 580
             |||||||| ||||||||||| ||||| ||||||||||| ||||||| ||||||||| || 
Sbjct: 61858 ccaagtgcaacagccatttgattctcaaggtagctcctactgtacaatccagactcaagt 61799

                                  
Query: 581   ctctcttcgcttggagcaaaa 601
             || ||||||||||||||||||
Sbjct: 61798 ctttcttcgcttggagcaaaa 61778



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                         
Query: 383   gcaacttgcccgatcttcttgctgaacccaaatctttcaaccatttgtctggcgacacgt 442
             |||||||| || ||||| ||||||||||||||||| |||| |||||| |  || ||||| 
Sbjct: 62107 gcaacttgtccaatctttttgctgaacccaaatctctcaatcatttgacgtgccacacga 62048

                                                                         
Query: 443   gagacctgcatgaagtcgctggatgccccagttgtcacgttgtcttggccaaagatcacc 502
             || ||||||||||| ||  | ||||| ||||| ||||| || || |  ||||||||||||
Sbjct: 62047 gacacctgcatgaaatcatttgatgctccagtcgtcacattctcatccccaaagatcacc 61988

                            
Query: 503   tcctcggcaaccctg 517
             ||||| |||||||||
Sbjct: 61987 tcctctgcaaccctg 61973



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 146   ccgtcgatgaagaggctcatgaactcctccccgtccacggtctccttctcgatcaggag 204
             ||||| || ||||| ||||||||||| || ||||| || || || ||||||||||||||
Sbjct: 62432 ccgtcaataaagagactcatgaactcttcaccgtcaacagtttctttctcgatcaggag 62374

---

>dbj|AB023032.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K5J14
          Length = 59762

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 72/80 (90%)
 Strand = Plus / Minus

                                                                         
Query: 518   ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 577
             ||||||||||| ||||||||||||||||| |||||||| ||||| |||| ||| ||||| 
Sbjct: 43080 ccaccaagtgcaacagccatttggttctcaaggtagcttctgctatacaatccggactct 43021

                                 
Query: 578   agcctctcttcgcttggagc 597
             |||||||||||||| |||||
Sbjct: 43020 agcctctcttcgctaggagc 43001



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 133/167 (79%)
 Strand = Plus / Minus

                                                                         
Query: 350   cccaagaaagggtttccaccagatgacccaatcgcaacttgcccgatcttcttgctgaac 409
             ||||||||||||||||| || | |   ||||  |||||||| || ||||| |||||||||
Sbjct: 43337 cccaagaaagggtttcctcctgctccaccaactgcaacttgtccaatctttttgctgaac 43278

                                                                         
Query: 410   ccaaatctttcaaccatttgtctggcgacacgtgagacctgcatgaagtcgctggatgcc 469
             || ||||| ||||||||||| |  || || || || || |||||||| ||  | ||||| 
Sbjct: 43277 ccgaatctctcaaccatttggcgagccacccgcgacacttgcatgaaatcatttgatgct 43218

                                                            
Query: 470   ccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccct 516
             || |||||||| || || |  |||||||||||||| || ||||||||
Sbjct: 43217 ccggttgtcacattctcgtctccaaagatcacctcttctgcaaccct 43171

---

>gb|DQ339462.1| Vitis pseudoreticulata ATPase mRNA, complete cds
          Length = 600

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                       
Query: 518 ccaccaagtgccacagccatttggttctctaggtagctcctgctgtacagtccagactcg 577
           ||||| ||||| |||||||| || ||||| ||||| || || ||||||||||||||||||
Sbjct: 581 ccacccagtgcaacagccatctgattctccaggtaacttctactgtacagtccagactcg 522

                                   
Query: 578 agcctctcttcgcttggagcaaaa 601
           || |||||||| ||||||||||||
Sbjct: 521 agtctctcttcacttggagcaaaa 498

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                         
Query: 466      tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 522
                |||||||||||| || |||||||  ||||| || | |||||| ||||||||||||||
Sbjct: 24613541 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 24613597

---

>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1040D09
          Length = 148102

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                      
Query: 466   tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 522
             |||||||||||| || |||||||  ||||| || | |||||| ||||||||||||||
Sbjct: 39504 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 39560

---

>dbj|AK068431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E14, full
           insert sequence
          Length = 1443

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 466 tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 522
           |||||||||||| || |||||||  ||||| || | |||||| ||||||||||||||
Sbjct: 617 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 561

---

>dbj|AK060394.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A12, full
           insert sequence
          Length = 1284

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 466 tgccccagttgtcacgttgtcttggccaaagatcacctcctcggcaaccctgccacc 522
           |||||||||||| || |||||||  ||||| || | |||||| ||||||||||||||
Sbjct: 564 tgccccagttgtaacattgtcttccccaaaaatgagctcctctgcaaccctgccacc 508

---

>emb|AL355537.11| Human DNA sequence from clone RP11-442O18 on chromosome 10 Contains three
              novel genes, complete sequence
          Length = 188728

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 25     tgtttgcaaaaacaacattttt 46
              ||||||||||||||||||||||
Sbjct: 113149 tgtttgcaaaaacaacattttt 113128

---

>gb|AC162693.5| Mus musculus chromosome 15, clone RP24-89G21, complete sequence
          Length = 159813

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 9      aggaactatacaaacatgttt 29
              |||||||||||||||||||||
Sbjct: 121860 aggaactatacaaacatgttt 121840

---

>gb|AC021667.21|AC021667 Mus musculus, clone RP23-304J12, complete sequence
          Length = 203106

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 9      aggaactatacaaacatgttt 29
              |||||||||||||||||||||
Sbjct: 174774 aggaactatacaaacatgttt 174794

---

>gb|BT016970.1| Zea mays clone E04912707E08.c mRNA sequence
          Length = 202

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 125 gcgacaaacagctccgcctgcccgtcgatgaa 156
           |||||||||||||| ||||| ||||| |||||
Sbjct: 162 gcgacaaacagctcggcctggccgtcaatgaa 193



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 56 atgtggttcctacaagctgg 75
          ||||||||||||||||||||
Sbjct: 62 atgtggttcctacaagctgg 81

---

>gb|AC009395.7| Drosophila melanogaster clone BACR01D01, complete sequence
          Length = 189116

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 158    aggctcatgaactcctccccgtcc 181
              |||||||||||||||||| |||||
Sbjct: 125479 aggctcatgaactcctcctcgtcc 125502

---

>gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome 14, complete sequence
          Length = 210969

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 552   agctcctgctgtacagtccagact 575
             ||||||||||||||||| ||||||
Sbjct: 68409 agctcctgctgtacagtgcagact 68432

---

>gb|AE009134.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 160
           of 256 of the complete sequence
          Length = 13735

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 cctgcccgtcgatgaagagg 160
           ||||||||||||||||||||
Sbjct: 470 cctgcccgtcgatgaagagg 489

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       aaaacaacatttttactaga 52
                ||||||||||||||||||||
Sbjct: 30045234 aaaacaacatttttactaga 30045215

---

>gb|AC130218.4| Mus musculus BAC clone RP23-121N18 from chromosome 18, complete
             sequence
          Length = 213673

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   gaagaggctcatgaactcct 173
             ||||||||||||||||||||
Sbjct: 81922 gaagaggctcatgaactcct 81903

---

>gb|AY094953.1| Drosophila melanogaster RH69586 full insert cDNA
          Length = 870

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 150 cgatgaagaggctcatgaactcctcccc 177
           |||||||||||||||| ||||| |||||
Sbjct: 656 cgatgaagaggctcataaactcttcccc 683

---

>gb|AC144484.5| Medicago truncatula clone mth2-30o16, complete sequence
          Length = 121144

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    aaacatgtttgcaaaaacaa 39
             ||||||||||||||||||||
Sbjct: 40718 aaacatgtttgcaaaaacaa 40737

---

>gb|AC152818.17| Medicago truncatula clone mth2-85g12, complete sequence
          Length = 142154

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    aaacatgtttgcaaaaacaa 39
             ||||||||||||||||||||
Sbjct: 40721 aaacatgtttgcaaaaacaa 40740

---

>emb|AL513542.11| Human DNA sequence from clone RP11-129J12 on chromosome 10 Contains a
             novel gene and three CpG islands, complete sequence
          Length = 46619

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     tttacaaggaactatacaaa 22
             ||||||||||||||||||||
Sbjct: 44932 tttacaaggaactatacaaa 44951

---

>emb|AL353719.10| Human DNA sequence from clone RP11-85A1 on chromosome 10 Contains
           the NKX2-3 gene for NK2 transcription factor related,
           locus 3 (Drosophila), the gene for putative
           mitochondrial solute carrier (MRS3/4) and five CpG
           islands, complete sequence
          Length = 123160

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 3   tttacaaggaactatacaaa 22
           ||||||||||||||||||||
Sbjct: 313 tttacaaggaactatacaaa 332

---

>emb|AL096773.6|HS1000E10 Human DNA sequence from clone RP5-1000E10 on chromosome 1p12-13.3
             Contains the 5' end of the gene for a novel protein
             (FLJ37099), the AMPD1 gene for adenosine monophosphate
             deaminase 1 (isoform M), the NRAS gene for neuroblastoma
             RAS viral (v-ras) oncogene homolog, the gene for
             NRAS-related gene (D1S155E) and the gene for a novel
             protein (FLJ44339), complete sequence
          Length = 140207

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   aatctttcaaccatttgtct 432
             ||||||||||||||||||||
Sbjct: 62486 aatctttcaaccatttgtct 62505

---

>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    aaaacaacatttttactaga 52
             ||||||||||||||||||||
Sbjct: 62517 aaaacaacatttttactaga 62536

---

>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin
              biosynthetic gene cluster, complete sequence
          Length = 132544

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 500    acctcctcggcaaccctgcc 519
              ||||||||||||||||||||
Sbjct: 128885 acctcctcggcaaccctgcc 128866

---

>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23,
             complete sequence
          Length = 149353

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    aaaacaacatttttactaga 52
             ||||||||||||||||||||
Sbjct: 52316 aaaacaacatttttactaga 52335

---

>ref|NM_169826.1| Drosophila melanogaster CG31224-RA (CG31224), mRNA
          Length = 7059

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 158  aggctcatgaactcctccccgtcc 181
            |||||||||||||||||| |||||
Sbjct: 2447 aggctcatgaactcctcctcgtcc 2424

---

>ref|NM_078959.3| Drosophila melanogaster Peroxiredoxin 2540 CG11765-RA (Prx2540-2),
           mRNA
          Length = 868

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 150 cgatgaagaggctcatgaactcctcccc 177
           |||||||||||||||| ||||| |||||
Sbjct: 657 cgatgaagaggctcataaactcttcccc 684

---

>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 141     cctgcccgtcgatgaagagg 160
               ||||||||||||||||||||
Sbjct: 1766640 cctgcccgtcgatgaagagg 1766659

---

>gb|AY075377.1| Drosophila melanogaster LD06123 full length cDNA
          Length = 3188

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 158  aggctcatgaactcctccccgtcc 181
            |||||||||||||||||| |||||
Sbjct: 2447 aggctcatgaactcctcctcgtcc 2424

---

>gb|AY070952.1| Drosophila melanogaster RE05093 full length cDNA
          Length = 870

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 150 cgatgaagaggctcatgaactcctcccc 177
           |||||||||||||||| ||||| |||||
Sbjct: 655 cgatgaagaggctcataaactcttcccc 682

---

>gb|AC008632.6|AC008632 Homo sapiens chromosome 5 clone CTB-164N12, complete sequence
          Length = 112687

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   tgccacagccatttggttct 545
             ||||||||||||||||||||
Sbjct: 59771 tgccacagccatttggttct 59752

---

>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence
          Length = 181577

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    aaaacaacatttttactaga 52
             ||||||||||||||||||||
Sbjct: 52509 aaaacaacatttttactaga 52528

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 33       aaaacaacatttttactaga 52
                ||||||||||||||||||||
Sbjct: 33621256 aaaacaacatttttactaga 33621275

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 33       aaaacaacatttttactaga 52
                ||||||||||||||||||||
Sbjct: 18087307 aaaacaacatttttactaga 18087326

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       aaaacaacatttttactaga 52
                ||||||||||||||||||||
Sbjct: 30136656 aaaacaacatttttactaga 30136637

---

>gb|AC007398.6|AC007398 Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone
             BACR20O22, complete sequence
          Length = 168567

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 150   cgatgaagaggctcatgaactcctcccc 177
             |||||||||||||||| ||||| |||||
Sbjct: 77043 cgatgaagaggctcataaactcttcccc 77070

---

>gb|AC007812.6|AC007812 Drosophila melanogaster, chromosome 3R, region 91C-91C, BAC clone
             BACR01F15, complete sequence
          Length = 186989

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 158   aggctcatgaactcctccccgtcc 181
             |||||||||||||||||| |||||
Sbjct: 35762 aggctcatgaactcctcctcgtcc 35785

---

>gb|AC008663.6|AC008663 Homo sapiens chromosome 5 clone CTB-33O18, complete sequence
          Length = 142859

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 526    tgccacagccatttggttct 545
              ||||||||||||||||||||
Sbjct: 132432 tgccacagccatttggttct 132413

---

>gb|BT003589.1| Drosophila melanogaster LD03662 full insert cDNA
          Length = 2508

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 158  aggctcatgaactcctccccgtcc 181
            |||||||||||||||||| |||||
Sbjct: 1241 aggctcatgaactcctcctcgtcc 1218

---

>dbj|AP003520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0021H10
          Length = 142659

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    catgtttgcaaaaacaacat 42
             ||||||||||||||||||||
Sbjct: 14070 catgtttgcaaaaacaacat 14089

---

>gb|AC140071.4| Mus musculus BAC clone RP23-394K8 from 3, complete sequence
          Length = 203896

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    atacaaacatgtttgcaaaa 35
             ||||||||||||||||||||
Sbjct: 48422 atacaaacatgtttgcaaaa 48441

---

>emb|CR450802.8| Zebrafish DNA sequence from clone CH211-197I12 in linkage group 22,
             complete sequence
          Length = 186908

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    tgcaaaaacaacatttttac 48
             ||||||||||||||||||||
Sbjct: 35478 tgcaaaaacaacatttttac 35459

---

>emb|AL772158.6| Zebrafish DNA sequence from clone CH211-128N21 in linkage group 22,
             complete sequence
          Length = 178046

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    tgcaaaaacaacatttttac 48
             ||||||||||||||||||||
Sbjct: 29442 tgcaaaaacaacatttttac 29461

---

>emb|BX005362.6| Zebrafish DNA sequence from clone CH211-159C12 in linkage group 22,
              complete sequence
          Length = 178151

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     tgcaaaaacaacatttttac 48
              ||||||||||||||||||||
Sbjct: 144817 tgcaaaaacaacatttttac 144836

---

>gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61 of 118 of the
             complete sequence
          Length = 255619

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 158   aggctcatgaactcctccccgtcc 181
             |||||||||||||||||| |||||
Sbjct: 48507 aggctcatgaactcctcctcgtcc 48530

---

>gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21 of 73 of the complete
             sequence
          Length = 281782

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 150   cgatgaagaggctcatgaactcctcccc 177
             |||||||||||||||| ||||| |||||
Sbjct: 55947 cgatgaagaggctcataaactcttcccc 55974

---

>dbj|AB100244.1| Penicillium camemberti pyrG gene for orotidine-5'-phosphate
            decarboxylase, complete cds
          Length = 2580

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 220  gaggatgtcgatgtgggtgttgat 243
            |||||||||||||||||| |||||
Sbjct: 1353 gaggatgtcgatgtgggttttgat 1330

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 33       aaaacaacatttttactaga 52
                ||||||||||||||||||||
Sbjct: 18013628 aaaacaacatttttactaga 18013647

---

>emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa0028O09 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155927

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    aaaacaacatttttactaga 52
             ||||||||||||||||||||
Sbjct: 40985 aaaacaacatttttactaga 41004

---

>emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chromosome 12, complete
             sequence
          Length = 201549

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tttgcaaaaacaacattttt 46
             ||||||||||||||||||||
Sbjct: 20409 tttgcaaaaacaacattttt 20428

---

>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 316     catcgagtagtccttctggc 335
               ||||||||||||||||||||
Sbjct: 2170771 catcgagtagtccttctggc 2170790

---

>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 316    catcgagtagtccttctggc 335
              ||||||||||||||||||||
Sbjct: 970532 catcgagtagtccttctggc 970551


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,354,988
Number of Sequences: 3902068
Number of extensions: 4354988
Number of successful extensions: 85422
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84937
Number of HSP's gapped (non-prelim): 473
length of query: 616
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 593
effective length of database: 17,143,297,704
effective search space: 10165975538472
effective search space used: 10165975538472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---