ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal39a03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY255503.1| Triticum aestivum putative adenine phosphoribosyltransferase mRNA, complete cds Length = 1097 Score = 969 bits (489), Expect = 0.0 Identities = 655/705 (92%), Gaps = 9/705 (1%) Strand = Plus / Minus Query: 25 aaaaatctcataaaagaacctgaacaacaggatggttcttttctttgcggctaacagcgg 84 ||||||||| || |||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 1036 aaaaatctcgtagaagaacctgaacaacaggatggttcttttctttgcggctaacggtga 977 Query: 85 tgattcccgacagaaataactacaaagctctcatcaaatactctactactggaaaaacta 144 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| Sbjct: 976 tgattcccgacagaaataactacaa-gctctcatcaaatactccactactggaaaa-cta 919 Query: 145 gtgctaggaagactacatctcatctatctcaccctctccatcaaga----cacttagcaa 200 |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 918 gtgctaggaagactacatctcatctatctcaccctctccaccaagaaagacacttagcaa 859 Query: 201 tagcagctgcccctaacagtgtactgcagacttatcaatgcacatccaccgtgcgcgccc 260 |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||| Sbjct: 858 tagcagctgcccctaacagtgtactgcagagttatcaatacacatccaccatgcgcgc-- 801 Query: 261 ttgcaaatgaatgaagctgtcatcctttctctgatcaatcatcatcatttcattttttat 320 ||||||| |||||||||||| ||||||| ||||||||||||||||||||| | |||||| Sbjct: 800 ttgcaaacgaatgaagctgtgatcctttttctgatcaatcatcatcattttacattttat 741 Query: 321 ttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatccttaaac 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 ttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatccttaaac 681 Query: 381 ttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaagaagt 440 || || || |||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 680 ttaggaaggccaatgaggcatgcacactcaacaacgtcagctgcggcgcgttcaagaagt 621 Query: 441 tttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccacacgc 500 ||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 620 tttatggctgctgaaagtgtcccaccggttgcaaccagatcatccaccaccaccacacgg 561 Query: 501 tcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagcgta 560 || || || |||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 560 tctccgggctcgacggctccaacatgcatctccaagcaatccgtcccatactcgagcgta 501 Query: 561 taagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaatttg 620 ||| |||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 500 taattctcggaaatcacctcacctgggagtttgccgggtttgcgcagcggtatgaatttg 441 Query: 621 gctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcctgcg 680 |||||||| |||||||| ||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 440 gctccgatagccagcgcgatcgccgggccgaatatgaaccctctcgcttcaatacctgcg 381 Query: 681 acggccgcgatgcccatgcccgcggtagcgctccacgaacatgtc 725 |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 380 acggccgcgatgcccatg-ccgcggtagcgctccacgaacatgtc 337
>ref|XM_473079.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 639 Score = 365 bits (184), Expect = 1e-97 Identities = 353/408 (86%), Gaps = 1/408 (0%) Strand = Plus / Minus Query: 318 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 377 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| |||| Sbjct: 638 tatttgcgagactccaccagtatataaactggttttccattgagcttgtagaaattctta 579 Query: 378 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 437 |||| || || ||||||||||||||||||||||| || |||||| | || ||||||||| Sbjct: 578 tacttaggaaggccaatgaggcatgcacactcaactacgtcagctccagctcgttcaaga 519 Query: 438 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 497 |||||||| || ||| |||||||||||||||||||||| | ||||||||| ||||| || Sbjct: 518 agttttattgcagcacaaagtgttccaccggttgcaactaaatcatcaacgaccactacg 459 Query: 498 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 557 ||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 458 cgctcaccaggttcagtagctccaacatgcatctccaaacaatccgtcccatactcaagt 399 Query: 558 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 617 |||| ||||| ||||| ||||| |||||||| ||| |||||||||| |||||||||| Sbjct: 398 atataggtctcagaaattacctcacctgggagtttcttaggtttgcgcaacggtatgaat 339 Query: 618 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 677 || ||||| || || || || ||||| |||||||||||||| ||||| || ||||| ||| Sbjct: 338 tttgctccaattgctagtgcgatcgctgggccaaatatgaatcctctggcttcaatacct 279 Query: 678 gcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtc 725 |||||||||||||||| |||| |||||||||||||| ||||||||||| Sbjct: 278 gcgacggccgcgatgcgcatg-ccgcggtagcgctcgacgaacatgtc 232
>gb|AY238894.1| Oryza sativa (indica cultivar-group) adenine phosphoribosyltransferase form 2 mRNA, complete cds Length = 1122 Score = 365 bits (184), Expect = 1e-97 Identities = 353/408 (86%), Gaps = 1/408 (0%) Strand = Plus / Minus Query: 318 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 377 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| |||| Sbjct: 762 tatttgcgagactccaccagtatataaactggttttccattgagcttgtagaaattctta 703 Query: 378 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 437 |||| || || ||||||||||||||||||||||| || |||||| | || ||||||||| Sbjct: 702 tacttaggaaggccaatgaggcatgcacactcaactacgtcagctccagctcgttcaaga 643 Query: 438 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 497 |||||||| || ||| |||||||||||||||||||||| | ||||||||| ||||| || Sbjct: 642 agttttattgcagcacaaagtgttccaccggttgcaactaaatcatcaacgaccactacg 583 Query: 498 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 557 ||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 582 cgctcaccaggttcagtagctccaacatgcatctccaaacaatccgtcccatactcaagt 523 Query: 558 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 617 |||| ||||| ||||| ||||| |||||||| ||| |||||||||| |||||||||| Sbjct: 522 atataggtctcagaaattacctcacctgggagtttcttaggtttgcgcaacggtatgaat 463 Query: 618 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 677 || ||||| || || || || ||||| |||||||||||||| ||||| || ||||| ||| Sbjct: 462 tttgctccaattgctagtgcgatcgctgggccaaatatgaatcctctggcttcaatacct 403 Query: 678 gcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtc 725 |||||||||||||||| |||| |||||||||||||| ||||||||||| Sbjct: 402 gcgacggccgcgatgcgcatg-ccgcggtagcgctcgacgaacatgtc 356 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 ttcccgacagaaataactacaa 109 |||||||||||||||||||||| Sbjct: 987 ttcccgacagaaataactacaa 966
>ref|XM_466713.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 363 bits (183), Expect = 5e-97 Identities = 355/411 (86%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 318 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 377 |||| ||||||||||||||| | |||||||| || |||| ||||||||||||||||||| Sbjct: 789 tattcgcgggactccaccagcacataaactggtttgccattgagcttgtagaaatcctta 730 Query: 378 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 437 || || ||||| |||||||| || || ||||||||||| |||||| | || ||||||||| Sbjct: 729 aattttgggagcccaatgagacacgcgcactcaacaacgtcagctccagcgcgttcaaga 670 Query: 438 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 497 || ||||||| ||| ||||||| ||||| |||||||||||||||||||| | || |||| Sbjct: 669 agccttatagcagcacaaagtgtcccaccagttgcaaccagatcatcaacgatcagcaca 610 Query: 498 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 557 ||||| |||||||| | ||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 609 cgctcaccaggttcaatggcgccaacatgcatctgcaagcaatcggtcccgtactcgaga 550 Query: 558 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 617 ||| ||||| |||||||||||||||||||| ||| ||| || |||| |||||||||| Sbjct: 549 acatacgtctcagaaatcacctcgcctgggagtttcttgggcttacgcaacggtatgaat 490 Query: 618 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 677 ||||| || || |||||||| ||||||||||||||||||||||| || |||||||| || Sbjct: 489 ttggcgccaattgccagcgcgatcgccgggccaaatatgaaccccctagcctcaatcccg 430 Query: 678 gcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtcgac 728 |||||||| |||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 429 gcgacggcggcgatggccatg-ccgcggtagcgctcgacgaagatgtcgac 380
>ref|XM_466714.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1038 Score = 363 bits (183), Expect = 5e-97 Identities = 355/411 (86%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 318 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 377 |||| ||||||||||||||| | |||||||| || |||| ||||||||||||||||||| Sbjct: 714 tattcgcgggactccaccagcacataaactggtttgccattgagcttgtagaaatcctta 655 Query: 378 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 437 || || ||||| |||||||| || || ||||||||||| |||||| | || ||||||||| Sbjct: 654 aattttgggagcccaatgagacacgcgcactcaacaacgtcagctccagcgcgttcaaga 595 Query: 438 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 497 || ||||||| ||| ||||||| ||||| |||||||||||||||||||| | || |||| Sbjct: 594 agccttatagcagcacaaagtgtcccaccagttgcaaccagatcatcaacgatcagcaca 535 Query: 498 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 557 ||||| |||||||| | ||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 534 cgctcaccaggttcaatggcgccaacatgcatctgcaagcaatcggtcccgtactcgaga 475 Query: 558 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 617 ||| ||||| |||||||||||||||||||| ||| ||| || |||| |||||||||| Sbjct: 474 acatacgtctcagaaatcacctcgcctgggagtttcttgggcttacgcaacggtatgaat 415 Query: 618 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 677 ||||| || || |||||||| ||||||||||||||||||||||| || |||||||| || Sbjct: 414 ttggcgccaattgccagcgcgatcgccgggccaaatatgaaccccctagcctcaatcccg 355 Query: 678 gcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtcgac 728 |||||||| |||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 354 gcgacggcggcgatggccatg-ccgcggtagcgctcgacgaagatgtcgac 305
>dbj|AK070784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064G04, full insert sequence Length = 1038 Score = 363 bits (183), Expect = 5e-97 Identities = 355/411 (86%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 318 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 377 |||| ||||||||||||||| | |||||||| || |||| ||||||||||||||||||| Sbjct: 714 tattcgcgggactccaccagcacataaactggtttgccattgagcttgtagaaatcctta 655 Query: 378 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 437 || || ||||| |||||||| || || ||||||||||| |||||| | || ||||||||| Sbjct: 654 aattttgggagcccaatgagacacgcgcactcaacaacgtcagctccagcgcgttcaaga 595 Query: 438 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 497 || ||||||| ||| ||||||| ||||| |||||||||||||||||||| | || |||| Sbjct: 594 agccttatagcagcacaaagtgtcccaccagttgcaaccagatcatcaacgatcagcaca 535 Query: 498 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 557 ||||| |||||||| | ||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 534 cgctcaccaggttcaatggcgccaacatgcatctgcaagcaatcggtcccgtactcgaga 475 Query: 558 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 617 ||| ||||| |||||||||||||||||||| ||| ||| || |||| |||||||||| Sbjct: 474 acatacgtctcagaaatcacctcgcctgggagtttcttgggcttacgcaacggtatgaat 415 Query: 618 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 677 ||||| || || |||||||| ||||||||||||||||||||||| || |||||||| || Sbjct: 414 ttggcgccaattgccagcgcgatcgccgggccaaatatgaaccccctagcctcaatcccg 355 Query: 678 gcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtcgac 728 |||||||| |||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 354 gcgacggcggcgatggccatg-ccgcggtagcgctcgacgaagatgtcgac 305
>dbj|AK069606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024J22, full insert sequence Length = 1065 Score = 363 bits (183), Expect = 5e-97 Identities = 355/411 (86%), Gaps = 1/411 (0%) Strand = Plus / Minus Query: 318 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 377 |||| ||||||||||||||| | |||||||| || |||| ||||||||||||||||||| Sbjct: 789 tattcgcgggactccaccagcacataaactggtttgccattgagcttgtagaaatcctta 730 Query: 378 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 437 || || ||||| |||||||| || || ||||||||||| |||||| | || ||||||||| Sbjct: 729 aattttgggagcccaatgagacacgcgcactcaacaacgtcagctccagcgcgttcaaga 670 Query: 438 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 497 || ||||||| ||| ||||||| ||||| |||||||||||||||||||| | || |||| Sbjct: 669 agccttatagcagcacaaagtgtcccaccagttgcaaccagatcatcaacgatcagcaca 610 Query: 498 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 557 ||||| |||||||| | ||||||||||||||||| ||||||||| ||||||||||| || Sbjct: 609 cgctcaccaggttcaatggcgccaacatgcatctgcaagcaatcggtcccgtactcgaga 550 Query: 558 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 617 ||| ||||| |||||||||||||||||||| ||| ||| || |||| |||||||||| Sbjct: 549 acatacgtctcagaaatcacctcgcctgggagtttcttgggcttacgcaacggtatgaat 490 Query: 618 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 677 ||||| || || |||||||| ||||||||||||||||||||||| || |||||||| || Sbjct: 489 ttggcgccaattgccagcgcgatcgccgggccaaatatgaaccccctagcctcaatcccg 430 Query: 678 gcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtcgac 728 |||||||| |||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 429 gcgacggcggcgatggccatg-ccgcggtagcgctcgacgaagatgtcgac 380
>gb|AY485263.1| Zea mays adenine phosphoribosyltransferase (apt1) mRNA, complete cds Length = 1202 Score = 262 bits (132), Expect = 1e-66 Identities = 340/408 (83%), Gaps = 1/408 (0%) Strand = Plus / Minus Query: 318 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 377 |||||||||||||||||||| |||||||| || || || | |||||| |||||||||||| Sbjct: 812 tatttgcgggactccaccaggatgtaaaccggtttcccgttgagcttatagaaatcctta 753 Query: 378 aacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgttcaaga 437 || ||||| || ||||||||||||||||||||| | || | |||| | || || || ||| Sbjct: 752 aatttgggaagcccaatgaggcatgcacactcagccacgttagctcctgcgcgctcgaga 693 Query: 438 agttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccaccaccaca 497 ||| |||| || |||||||| |||||||| |||||||||| |||||| || ||||| || Sbjct: 692 agtcttattgcagcagaaagagttccaccagttgcaaccaaatcatcgacaaccactacg 633 Query: 498 cgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtactcaagc 557 ||||| || ||||| | || ||||||||||||||||| |||||| |||| |||||||| Sbjct: 632 cgctccccgggttcaatagctccaacatgcatctccaaacaatccatcccatactcaagt 573 Query: 558 gtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggtatgaat 617 |||| | || |||| ||||| ||||| |||||| ||||| || || |||||||| Sbjct: 572 acataactttcagaaaatacctcacctggaagcttcttaggtttacgtagtggtatgaac 513 Query: 618 ttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaatgcct 677 || ||||| ||||| |||||||| || || ||||| ||||| ||||| || ||||||||| Sbjct: 512 tttgctcctatggctagcgcaatggctggcccaaagatgaatcctctagcttcaatgcct 453 Query: 678 gcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtc 725 ||| ||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 452 gcggcggccgcgatgcccatg-ccgcggtagcgctcgacgaacatgtc 406
>dbj|AK121982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N02, full insert sequence Length = 1954 Score = 248 bits (125), Expect = 2e-62 Identities = 252/293 (86%), Gaps = 1/293 (0%) Strand = Plus / Minus Query: 433 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 492 ||||||||||||| || ||| |||||||||||||||||||||| | ||||||||| |||| Sbjct: 668 caagaagttttattgcagcacaaagtgttccaccggttgcaactaaatcatcaacgacca 609 Query: 493 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 552 | || ||||| |||||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 608 ctacgcgctcaccaggttcagtagctccaacatgcatctccaaacaatccgtcccatact 549 Query: 553 caagcgtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggta 612 |||| |||| ||||| ||||| ||||| |||||||| ||| |||||||||| ||||| Sbjct: 548 caagtatataggtctcagaaattacctcacctgggagtttcttaggtttgcgcaacggta 489 Query: 613 tgaatttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaa 672 ||||||| ||||| || || || || ||||| |||||||||||||| ||||| || |||| Sbjct: 488 tgaattttgctccaattgctagtgcgatcgctgggccaaatatgaatcctctggcttcaa 429 Query: 673 tgcctgcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtc 725 | ||||||||||||||||||| |||| |||||||||||||| ||||||||||| Sbjct: 428 tacctgcgacggccgcgatgcgcatg-ccgcggtagcgctcgacgaacatgtc 377 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 318 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcctta 377 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| |||| Sbjct: 1632 tatttgcgagactccaccagtatataaactggttttccattgagcttgtagaaattctta 1573 Query: 378 aacttggggagtccaatgaggcatgcacactcaacaacatcagct 422 |||| || || ||||||||||||||||||||||| || |||||| Sbjct: 1572 tacttaggaaggccaatgaggcatgcacactcaactacgtcagct 1528 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 ttcccgacagaaataactacaa 109 |||||||||||||||||||||| Sbjct: 1857 ttcccgacagaaataactacaa 1836
>gb|AY106749.1| Zea mays PCO120693 mRNA sequence Length = 1213 Score = 232 bits (117), Expect = 1e-57 Identities = 295/353 (83%), Gaps = 1/353 (0%) Strand = Plus / Minus Query: 373 ccttaaacttggggagtccaatgaggcatgcacactcaacaacatcagctgcggcacgtt 432 ||||||||||||| || ||||||||||||||||||||||| || | |||| | || || | Sbjct: 841 ccttaaacttgggaagcccaatgaggcatgcacactcaaccacgttagctcctgcgcgct 782 Query: 433 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 492 | |||||| |||| || |||||||| |||||||| |||||||||| |||||| || |||| Sbjct: 781 cgagaagtcttattgcagcagaaagagttccaccagttgcaaccaaatcatcgacaacca 722 Query: 493 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 552 | || ||||| || ||||| | || ||||||||||||||||| |||||| |||| |||| Sbjct: 721 ctacgcgctccccgggttcaatagctccaacatgcatctccaaacaatccatcccatact 662 Query: 553 caagcgtataagtctcggaaatcacctcgcctgggagcttcccgggtttgcgcagcggta 612 |||| |||| | || |||| ||||| ||||| |||||| ||||| || || |||| Sbjct: 661 caagtacataactttcagaaaatacctcacctggaagcttcttaggtttacgtagtggta 602 Query: 613 tgaatttggctccgatggccagcgcaatcgccgggccaaatatgaaccctctcgcctcaa 672 |||| || ||||| ||||| |||||||| || || ||||| ||||| ||||| || |||| Sbjct: 601 tgaactttgctcctatggctagcgcaatggctggcccaaagatgaatcctctagcttcaa 542 Query: 673 tgcctgcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtc 725 |||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 541 tgcctgcgacggccgcgatgcccatg-ccgcggtagcgctcgacgaacatgtc 490
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 143 bits (72), Expect = 9e-31 Identities = 132/152 (86%) Strand = Plus / Minus Query: 433 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 492 ||||||| ||||||| ||| ||||||| ||||| |||||||||||||||||||| | || Sbjct: 24245479 caagaagccttatagcagcacaaagtgtcccaccagttgcaaccagatcatcaacgatca 24245420 Query: 493 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 552 ||||||||| |||||||| | ||||||||||||||||| ||||||||| |||||||||| Sbjct: 24245419 gcacacgctcaccaggttcaatggcgccaacatgcatctgcaagcaatcggtcccgtact 24245360 Query: 553 caagcgtataagtctcggaaatcacctcgcct 584 | || ||| ||||| ||||||||||||||| Sbjct: 24245359 cgagaacatacgtctcagaaatcacctcgcct 24245328 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 582 cctgggagcttcccgggtttgcgcagcggtatgaatttggctccgatggccagcgcaatc 641 |||||||| ||| ||| || |||| ||||||||||||||| || || |||||||| ||| Sbjct: 24244853 cctgggagtttcttgggcttacgcaacggtatgaatttggcgccaattgccagcgcgatc 24244794 Query: 642 gccgggccaaatatgaaccctctcgcctcaatgcctg 678 |||||||||||||||||||| || |||||||| |||| Sbjct: 24244793 gccgggccaaatatgaaccccctagcctcaatccctg 24244757 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 318 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcct 375 |||| ||||||||||||||| | |||||||| || |||| ||||||||||||||||| Sbjct: 24247680 tattcgcgggactccaccagcacataaactggtttgccattgagcttgtagaaatcct 24247623 Score = 54.0 bits (27), Expect = 7e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 678 gcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtcgac 728 |||||||| |||||| ||||||| |||||||||||| ||||| |||||||| Sbjct: 24243214 gcgacggcggcgatggccatgcc-gcggtagcgctcgacgaagatgtcgac 24243165 Score = 44.1 bits (22), Expect = 0.64 Identities = 43/50 (86%) Strand = Plus / Minus Query: 373 ccttaaacttggggagtccaatgaggcatgcacactcaacaacatcagct 422 ||||||| || ||||| |||||||| || || ||||||||||| |||||| Sbjct: 24246671 ccttaaattttgggagcccaatgagacacgcgcactcaacaacgtcagct 24246622
>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2055_H10 Length = 119290 Score = 143 bits (72), Expect = 9e-31 Identities = 132/152 (86%) Strand = Plus / Minus Query: 433 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 492 ||||||| ||||||| ||| ||||||| ||||| |||||||||||||||||||| | || Sbjct: 45867 caagaagccttatagcagcacaaagtgtcccaccagttgcaaccagatcatcaacgatca 45808 Query: 493 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 552 ||||||||| |||||||| | ||||||||||||||||| ||||||||| |||||||||| Sbjct: 45807 gcacacgctcaccaggttcaatggcgccaacatgcatctgcaagcaatcggtcccgtact 45748 Query: 553 caagcgtataagtctcggaaatcacctcgcct 584 | || ||| ||||| ||||||||||||||| Sbjct: 45747 cgagaacatacgtctcagaaatcacctcgcct 45716 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Minus Query: 582 cctgggagcttcccgggtttgcgcagcggtatgaatttggctccgatggccagcgcaatc 641 |||||||| ||| ||| || |||| ||||||||||||||| || || |||||||| ||| Sbjct: 45241 cctgggagtttcttgggcttacgcaacggtatgaatttggcgccaattgccagcgcgatc 45182 Query: 642 gccgggccaaatatgaaccctctcgcctcaatgcctg 678 |||||||||||||||||||| || |||||||| |||| Sbjct: 45181 gccgggccaaatatgaaccccctagcctcaatccctg 45145 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Minus Query: 318 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaatcct 375 |||| ||||||||||||||| | |||||||| || |||| ||||||||||||||||| Sbjct: 48068 tattcgcgggactccaccagcacataaactggtttgccattgagcttgtagaaatcct 48011 Score = 54.0 bits (27), Expect = 7e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 678 gcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtcgac 728 |||||||| |||||| ||||||| |||||||||||| ||||| |||||||| Sbjct: 43602 gcgacggcggcgatggccatgcc-gcggtagcgctcgacgaagatgtcgac 43553 Score = 44.1 bits (22), Expect = 0.64 Identities = 43/50 (86%) Strand = Plus / Minus Query: 373 ccttaaacttggggagtccaatgaggcatgcacactcaacaacatcagct 422 ||||||| || ||||| |||||||| || || ||||||||||| |||||| Sbjct: 47059 ccttaaattttgggagcccaatgagacacgcgcactcaacaacgtcagct 47010
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 127 bits (64), Expect = 6e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 433 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 492 ||||||||||||| || ||| |||||||||||||||||||||| | ||||||||| |||| Sbjct: 25879 caagaagttttattgcagcacaaagtgttccaccggttgcaactaaatcatcaacgacca 25820 Query: 493 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 552 | || ||||| |||||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 25819 ctacgcgctcaccaggttcagtagctccaacatgcatctccaaacaatccgtcccatact 25760 Query: 553 caagcgtataagtctcggaaatcacctc 580 |||| |||| ||||| ||||| ||||| Sbjct: 25759 caagtatataggtctcagaaattacctc 25732 Score = 77.8 bits (39), Expect = 5e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 318 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaat 372 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 26939 tatttgcgagactccaccagtatataaactggttttccattgagcttgtagaaat 26885 Score = 69.9 bits (35), Expect = 1e-08 Identities = 48/51 (94%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 675 cctgcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtc 725 ||||||||||||||||||| |||| |||||||||||||| ||||||||||| Sbjct: 23373 cctgcgacggccgcgatgcgcatg-ccgcggtagcgctcgacgaacatgtc 23324 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 597 ggtttgcgcagcggtatgaatttggctccgatggccagcgcaatcgccgggccaaatatg 656 |||||||||| |||||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 25293 ggtttgcgcaacggtatgaattttgctccaattgctagtgcgatcgctgggccaaatatg 25234 Query: 657 aaccctctcgcctcaat 673 || ||||| || ||||| Sbjct: 25233 aatcctctggcttcaat 25217 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 373 ccttaaacttggggagtccaatgaggcatgcacactcaacaacatcagct 422 ||||| |||| || || ||||||||||||||||||||||| || |||||| Sbjct: 26788 ccttatacttaggaaggccaatgaggcatgcacactcaactacgtcagct 26739 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 ttcccgacagaaataactacaa 109 |||||||||||||||||||||| Sbjct: 27504 ttcccgacagaaataactacaa 27483
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 127 bits (64), Expect = 6e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 433 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 492 ||||||||||||| || ||| |||||||||||||||||||||| | ||||||||| |||| Sbjct: 25144212 caagaagttttattgcagcacaaagtgttccaccggttgcaactaaatcatcaacgacca 25144153 Query: 493 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 552 | || ||||| |||||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 25144152 ctacgcgctcaccaggttcagtagctccaacatgcatctccaaacaatccgtcccatact 25144093 Query: 553 caagcgtataagtctcggaaatcacctc 580 |||| |||| ||||| ||||| ||||| Sbjct: 25144092 caagtatataggtctcagaaattacctc 25144065 Score = 77.8 bits (39), Expect = 5e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 318 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaat 372 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 25145272 tatttgcgagactccaccagtatataaactggttttccattgagcttgtagaaat 25145218 Score = 69.9 bits (35), Expect = 1e-08 Identities = 48/51 (94%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 675 cctgcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtc 725 ||||||||||||||||||| |||| |||||||||||||| ||||||||||| Sbjct: 25141706 cctgcgacggccgcgatgcgcatg-ccgcggtagcgctcgacgaacatgtc 25141657 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 597 ggtttgcgcagcggtatgaatttggctccgatggccagcgcaatcgccgggccaaatatg 656 |||||||||| |||||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 25143626 ggtttgcgcaacggtatgaattttgctccaattgctagtgcgatcgctgggccaaatatg 25143567 Query: 657 aaccctctcgcctcaat 673 || ||||| || ||||| Sbjct: 25143566 aatcctctggcttcaat 25143550 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 373 ccttaaacttggggagtccaatgaggcatgcacactcaacaacatcagct 422 ||||| |||| || || ||||||||||||||||||||||| || |||||| Sbjct: 25145121 ccttatacttaggaaggccaatgaggcatgcacactcaactacgtcagct 25145072 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 ttcccgacagaaataactacaa 109 |||||||||||||||||||||| Sbjct: 25145837 ttcccgacagaaataactacaa 25145816
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 127 bits (64), Expect = 6e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 433 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccacca 492 ||||||||||||| || ||| |||||||||||||||||||||| | ||||||||| |||| Sbjct: 91639 caagaagttttattgcagcacaaagtgttccaccggttgcaactaaatcatcaacgacca 91580 Query: 493 ccacacgctcgccaggttcgacggcgccaacatgcatctccaagcaatccgtcccgtact 552 | || ||||| |||||||| || ||||||||||||||||| ||||||||||| |||| Sbjct: 91579 ctacgcgctcaccaggttcagtagctccaacatgcatctccaaacaatccgtcccatact 91520 Query: 553 caagcgtataagtctcggaaatcacctc 580 |||| |||| ||||| ||||| ||||| Sbjct: 91519 caagtatataggtctcagaaattacctc 91492 Score = 77.8 bits (39), Expect = 5e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 318 tatttgcgggactccaccagtatgtaaactggctttccatcgagcttgtagaaat 372 |||||||| |||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 92699 tatttgcgagactccaccagtatataaactggttttccattgagcttgtagaaat 92645 Score = 69.9 bits (35), Expect = 1e-08 Identities = 48/51 (94%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 675 cctgcgacggccgcgatgcccatgcccgcggtagcgctccacgaacatgtc 725 ||||||||||||||||||| |||| |||||||||||||| ||||||||||| Sbjct: 89133 cctgcgacggccgcgatgcgcatg-ccgcggtagcgctcgacgaacatgtc 89084 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 597 ggtttgcgcagcggtatgaatttggctccgatggccagcgcaatcgccgggccaaatatg 656 |||||||||| |||||||||||| ||||| || || || || ||||| |||||||||||| Sbjct: 91053 ggtttgcgcaacggtatgaattttgctccaattgctagtgcgatcgctgggccaaatatg 90994 Query: 657 aaccctctcgcctcaat 673 || ||||| || ||||| Sbjct: 90993 aatcctctggcttcaat 90977 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 373 ccttaaacttggggagtccaatgaggcatgcacactcaacaacatcagct 422 ||||| |||| || || ||||||||||||||||||||||| || |||||| Sbjct: 92548 ccttatacttaggaaggccaatgaggcatgcacactcaactacgtcagct 92499 Score = 44.1 bits (22), Expect = 0.64 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 ttcccgacagaaataactacaa 109 |||||||||||||||||||||| Sbjct: 93264 ttcccgacagaaataactacaa 93243
>gb|AY104264.1| Zea mays PCO144960 mRNA sequence Length = 1021 Score = 109 bits (55), Expect = 1e-20 Identities = 168/203 (82%), Gaps = 2/203 (0%) Strand = Plus / Minus Query: 526 gcatctccaagcaatccgtcccgtactcaagcgtataagtctcggaaatcacctcgcctg 585 ||||||||| |||||| ||||||||||| || || ||||||| |||||||| |||| Sbjct: 561 gcatctccaggcaatcagtcccgtactcgagaacgtacttctcggagatcacctcacctg 502 Query: 586 ggagcttcccgggtttgcgcagcggtatgaatttggctccgatggccagcgcaatcgccg 645 ||||||||| |||| |||||| |||||||| || || || || |||||||| ||||||| Sbjct: 501 ggagcttccttggtt-gcgcagaggtatgaacttagcgccaatagccagcgcgatcgccg 443 Query: 646 ggccaaatatgaaccctctcgcctcaatgcctgcgacggccgcgatgcccatgcccgcgg 705 |||| || | ||| || || |||||||| || |||||||| |||||||||| ||||||| Sbjct: 442 ggccgaacacgaagcccctggcctcaatcccggcgacggcgtcgatgcccat-cccgcgg 384 Query: 706 tagcgctccacgaacatgtcgac 728 || ||||| ||||||| |||||| Sbjct: 383 taccgctcgacgaacaggtcgac 361
>gb|BT016526.1| Zea mays clone Contig359 mRNA sequence Length = 527 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 391 caatgaggcatgcacactcaacaacatcagctgcggcacgttcaagaagttttatagctg 450 |||||| ||| |||||||||||||| | ||| | ||||||||| |||||| | ||||| Sbjct: 208 caatgacgcaagcacactcaacaacctttgctccaacacgttcaataagtttgacagctg 149 Query: 451 cagaaagtgttccaccggttgcaaccagatcatc 484 || | |||||||||||||| |||| |||||||| Sbjct: 148 cacagagtgttccaccggtggcaataagatcatc 115
>gb|AY104688.1| Zea mays PCO061445 mRNA sequence Length = 991 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 391 caatgaggcatgcacactcaacaacatcagctgcggcacgttcaagaagttttatagctg 450 |||||| ||| |||||||||||||| | ||| | ||||||||| |||||| | ||||| Sbjct: 635 caatgacgcaagcacactcaacaacctttgctccaacacgttcaataagtttgacagctg 576 Query: 451 cagaaagtgttccaccggttgcaaccagatcatc 484 || | |||||||||||||| |||| |||||||| Sbjct: 575 cacagagtgttccaccggtggcaataagatcatc 542
>gb|BT018097.1| Zea mays clone EL01N0552G09.c mRNA sequence Length = 1005 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 402 gcacactcaacaacatcagctgcggcacgttcaagaagttttatagctgcagaaagtgtt 461 |||||||||||||| | ||| | ||||||||| |||||| | ||||||| | |||||| Sbjct: 583 gcacactcaacaacctttgctccaacacgttcaataagtttgacagctgcacagagtgtt 524 Query: 462 ccaccggttgcaaccagatcatc 484 |||||||| |||| |||||||| Sbjct: 523 ccaccggtagcaataagatcatc 501
>gb|AY108359.1| Zea mays PCO061446 mRNA sequence Length = 974 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 402 gcacactcaacaacatcagctgcggcacgttcaagaagttttatagctgcagaaagtgtt 461 |||||||||||||| | ||| | ||||||||| |||||| | ||||||| | |||||| Sbjct: 585 gcacactcaacaacctttgctccaacacgttcaataagtttgacagctgcacatagtgtt 526 Query: 462 ccaccggttgcaaccagatcatc 484 |||||||| |||| |||||||| Sbjct: 525 ccaccggtagcaataagatcatc 503
>gb|AC109587.2| Homo sapiens chromosome 3 clone CTD-2013N24, complete sequence Length = 156614 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 216 acagtgtactgcagacttatcaat 239 |||||||||||||||||||||||| Sbjct: 22949 acagtgtactgcagacttatcaat 22972
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 44.1 bits (22), Expect = 0.64 Identities = 49/58 (84%) Strand = Plus / Plus Query: 433 caagaagttttatagctgcagaaagtgttccaccggttgcaaccagatcatcaaccac 490 |||||||||| | ||||||| | ||||||||||| || |||| |||||||| ||||| Sbjct: 44180 caagaagtttgacagctgcacagagtgttccaccagtggcaataagatcatcgaccac 44237 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 atcatcatcatttcattttt 317 |||||||||||||||||||| Sbjct: 38851 atcatcatcatttcattttt 38870
>emb|Y18250.1|MTY18250 Medicago truncatula mRNA for MtN30 gene, partial Length = 739 Score = 44.1 bits (22), Expect = 0.64 Identities = 61/74 (82%) Strand = Plus / Minus Query: 459 gttccaccggttgcaaccagatcatcaaccaccaccacacgctcgccaggttcgacggcg 518 |||||||| ||||||| || |||||||||||| | |||| || |||| ||| || || Sbjct: 281 gttccaccagttgcaatcaaatcatcaaccacaatagcacgttcaccagtttcaacagct 222 Query: 519 ccaacatgcatctc 532 |||||||||||||| Sbjct: 221 ccaacatgcatctc 208
>ref|XM_607440.2| PREDICTED: Bos taurus similar to CG9339-PF, isoform F (LOC529002), mRNA Length = 3940 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 atgcacacacaaaaatctcat 35 ||||||||||||||||||||| Sbjct: 3468 atgcacacacaaaaatctcat 3448
>gb|AC129603.3| Mus musculus BAC clone RP23-63E1 from 18, complete sequence Length = 175249 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 acacacaaaaatctcataaaa 39 ||||||||||||||||||||| Sbjct: 92607 acacacaaaaatctcataaaa 92587
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 ctcgccaggttcgacggcgcc 520 ||||||||||||||||||||| Sbjct: 267750 ctcgccaggttcgacggcgcc 267730
>gb|AC165271.2| Mus musculus BAC clone RP24-424G16 from chromosome 16, complete sequence Length = 165496 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 atgcacacacaaaaatctcataaaa 39 ||||||||||| ||||||||||||| Sbjct: 65334 atgcacacacagaaatctcataaaa 65358
>gb|AC007995.23| Mus musculus, clone RP23-266E9, complete sequence Length = 204193 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 acacacaaaaatctcataaaa 39 ||||||||||||||||||||| Sbjct: 43756 acacacaaaaatctcataaaa 43776
>gb|AC078793.13| Homo sapiens 3 BAC RP11-693A13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152829 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 135 ggaaaaactagtgctaggaagacta 159 ||||||||||||||||| ||||||| Sbjct: 140611 ggaaaaactagtgctagaaagacta 140635
>gb|AY190940.1| Drosophila erecta clone DERF01_19_N16 (D1428) genomic sequence Length = 43180 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 tcatttcattttttatttgcgggac 329 |||||||||||| |||||||||||| Sbjct: 8867 tcatttcattttctatttgcgggac 8843
>emb|BX324176.11| Mouse DNA sequence from clone RP23-136N12 on chromosome X, complete sequence Length = 81593 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 atgcacacacaaaaatctcataaaa 39 ||||||||||||| ||||||||||| Sbjct: 36658 atgcacacacaaatatctcataaaa 36634
>emb|BX890617.13| Zebrafish DNA sequence from clone DKEYP-84F11 in linkage group 19, complete sequence Length = 182182 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 tcatcatttcattttttattt 322 ||||||||||||||||||||| Sbjct: 18946 tcatcatttcattttttattt 18926
>dbj|AK114050.1| Ciona intestinalis cDNA, clone:cicl025h11, full insert sequence Length = 1192 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 atcatttcattttttatttgc 324 ||||||||||||||||||||| Sbjct: 872 atcatttcattttttatttgc 892
>dbj|AP003153.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-485C23, complete sequences Length = 156444 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 atgcacacacaaaaatctcataaaa 39 ||||||||||| ||||||||||||| Sbjct: 81615 atgcacacacagaaatctcataaaa 81591
>dbj|AP003152.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-356B22, complete sequences Length = 190116 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 atgcacacacaaaaatctcataaaa 39 ||||||||||| ||||||||||||| Sbjct: 4135 atgcacacacagaaatctcataaaa 4111
>ref|NM_001036079.1| Arabidopsis thaliana clathrin binding AT1G48760 transcript variant AT1G48760.3 mRNA, complete cds Length = 3367 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 atcaatcatcatcatttcattttttatt 321 |||||||||||||| ||||||| ||||| Sbjct: 2990 atcaatcatcatcacttcatttattatt 3017
>ref|NM_103771.2| Arabidopsis thaliana clathrin binding AT1G48760 transcript variant AT1G48760.1 mRNA, complete cds Length = 3383 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 atcaatcatcatcatttcattttttatt 321 |||||||||||||| ||||||| ||||| Sbjct: 2990 atcaatcatcatcacttcatttattatt 3017
>ref|NM_179454.1| Arabidopsis thaliana clathrin binding AT1G48760 transcript variant AT1G48760.2 mRNA, complete cds Length = 3439 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 atcaatcatcatcatttcattttttatt 321 |||||||||||||| ||||||| ||||| Sbjct: 2990 atcaatcatcatcacttcatttattatt 3017
>ref|NM_103770.1| Arabidopsis thaliana lipid binding AT1G48750 mRNA, complete cds Length = 525 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 atcaatcatcatcatttcattttttatt 321 |||||||||||||| ||||||| ||||| Sbjct: 450 atcaatcatcatcacttcatttattatt 423
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 ggcacgttcaagaagtttta 444 |||||||||||||||||||| Sbjct: 2908047 ggcacgttcaagaagtttta 2908028
>gb|DQ215861.1| Taeniopygia guttata clone 0058P0047C05 developmentally regulated GTP binding protein 1-like mRNA, complete sequence Length = 1194 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cacaaaaatctcataaaaga 41 |||||||||||||||||||| Sbjct: 1035 cacaaaaatctcataaaaga 1054
>gb|DQ215860.1| Taeniopygia guttata clone 0063P0006D10 developmentally regulated GTP binding protein 1-like mRNA, complete sequence Length = 1212 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cacaaaaatctcataaaaga 41 |||||||||||||||||||| Sbjct: 1053 cacaaaaatctcataaaaga 1072
>gb|DQ215859.1| Taeniopygia guttata clone 0061P0014G12 developmentally regulated GTP binding protein 1-like mRNA, complete sequence Length = 1191 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cacaaaaatctcataaaaga 41 |||||||||||||||||||| Sbjct: 1021 cacaaaaatctcataaaaga 1040
>gb|DQ215858.1| Taeniopygia guttata clone 0058P0009E11 developmentally regulated GTP binding protein 1-like mRNA, complete sequence Length = 1184 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cacaaaaatctcataaaaga 41 |||||||||||||||||||| Sbjct: 1024 cacaaaaatctcataaaaga 1043
>gb|DQ215857.1| Taeniopygia guttata clone 0058P0047A05 developmentally regulated GTP binding protein 1-like mRNA, complete sequence Length = 1195 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cacaaaaatctcataaaaga 41 |||||||||||||||||||| Sbjct: 1036 cacaaaaatctcataaaaga 1055
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 ggcacgttcaagaagtttta 444 |||||||||||||||||||| Sbjct: 2908258 ggcacgttcaagaagtttta 2908239
>gb|AY658709.1| Synthetic construct Peudomonas aeruginosa clone FLH034660.01F PA2023 gene, partial cds Length = 840 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 tcgccaggttcgacggcgcc 520 |||||||||||||||||||| Sbjct: 607 tcgccaggttcgacggcgcc 588
>gb|AC166251.6| Mus musculus BAC RP23-298H20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187073 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 tacaaagctctcatcaaatactct 128 ||||||||||||||||||| |||| Sbjct: 78826 tacaaagctctcatcaaatgctct 78849
>ref|XM_653301.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0789.2), mRNA Length = 1290 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 cgccaggttcgacggcgcca 521 |||||||||||||||||||| Sbjct: 1155 cgccaggttcgacggcgcca 1136
>gb|AC155732.21| Mus musculus 6 BAC RP24-235I13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 165822 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 tacaaagctctcatcaaatactct 128 ||||||||||||||||||| |||| Sbjct: 37791 tacaaagctctcatcaaatgctct 37814
>gb|AC114643.9| Mus musculus chromosome 6, clone RP24-127D6, complete sequence Length = 215696 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tcatcatttcattttttatt 321 |||||||||||||||||||| Sbjct: 204102 tcatcatttcattttttatt 204121
>gb|AY458636.1| Uncultured bacterium 439 clone EBAC750-10B11 genomic sequence Length = 39858 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 agaaagtgttccaccggttg 471 |||||||||||||||||||| Sbjct: 19538 agaaagtgttccaccggttg 19557
>gb|AC129592.5| Mus musculus BAC clone RP24-86A6 from chromosome 3, complete sequence Length = 186218 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 catcatcatttcattttttatttg 323 ||||||||||||||||||| |||| Sbjct: 70353 catcatcatttcattttttttttg 70330
>emb|BX511265.13| Zebrafish DNA sequence from clone RP71-45G20 in linkage group 9, complete sequence Length = 183988 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcaaatgaatgaagctgtca 282 |||||||||||||||||||| Sbjct: 6600 gcaaatgaatgaagctgtca 6619
>gb|AC123044.4| Mus musculus BAC clone RP24-548B7 from chromosome 5, complete sequence Length = 184772 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tgcacacacaaaaatctcataaaa 39 |||||||||||||||| ||||||| Sbjct: 63749 tgcacacacaaaaatcccataaaa 63772
>emb|CR664537.2|CNS0FBQ7 Tetraodon nigroviridis full-length cDNA Length = 1673 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 cattttttatttgcgggact 330 |||||||||||||||||||| Sbjct: 887 cattttttatttgcgggact 906
>gb|AC161876.3| Mus musculus BAC clone RP24-388H6 from chromosome 1, complete sequence Length = 174149 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 12 tagatgcacacacaaaaatctcataaaa 39 ||||| |||||||||||||| ||||||| Sbjct: 41607 tagattcacacacaaaaatcccataaaa 41634
>emb|AL035078.32|HS17K7 Human DNA sequence from clone RP1-17K7 on chromosome 11p13, complete sequence Length = 130336 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cacacacaaaaatctcataa 37 |||||||||||||||||||| Sbjct: 7777 cacacacaaaaatctcataa 7758
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 tcatcatcatttcattttttattt 322 |||||||||||| ||||||||||| Sbjct: 488020 tcatcatcatttgattttttattt 488043
>gb|AY045879.1| Arabidopsis thaliana putative lipid transfer protein (At1g48750) mRNA, complete cds Length = 541 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 atcaatcatcatcatttcattttttatt 321 |||||||||||||| ||||||| ||||| Sbjct: 450 atcaatcatcatcacttcatttattatt 423
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tcatcatttcattttttatt 321 |||||||||||||||||||| Sbjct: 1648925 tcatcatttcattttttatt 1648906
>emb|AJ010734.1|PAAJ10734 Pseudomonas aeruginosa PAO1 ugd, galU, genes and partial gor gene Length = 3224 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 tcgccaggttcgacggcgcc 520 |||||||||||||||||||| Sbjct: 2241 tcgccaggttcgacggcgcc 2222
>gb|AC013562.6| Homo sapiens chromosome 8, clone RP11-313C15, complete sequence Length = 188755 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aaaaactagtgctaggaaga 156 |||||||||||||||||||| Sbjct: 145963 aaaaactagtgctaggaaga 145982
>emb|BX004803.11| Zebrafish DNA sequence from clone CH211-119C20 in linkage group 20 Contains a novel gene simialr to human and mouse CASKIN2 (CASK interacting protein 2), a novel gene for a nucleoside-diphosphate kinase (wu:fk59e05) and a CpG island, complete sequence Length = 167376 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 atcatcatcatttcattttt 317 |||||||||||||||||||| Sbjct: 32853 atcatcatcatttcattttt 32834
>gb|AC122725.30| Medicago truncatula clone mth2-4c11, complete sequence Length = 134892 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 tcatcatcatttcatttttt 318 |||||||||||||||||||| Sbjct: 23123 tcatcatcatttcatttttt 23142
>gb|AC093433.2| Homo sapiens chromosome 1 clone RP11-363H12, complete sequence Length = 172613 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cacacacaaaaatctcataa 37 |||||||||||||||||||| Sbjct: 105361 cacacacaaaaatctcataa 105342
>emb|AL670865.8| Mouse DNA sequence from clone RP23-395J4 on chromosome 4, complete sequence Length = 112907 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 atcatttcattttttatttg 323 |||||||||||||||||||| Sbjct: 94397 atcatttcattttttatttg 94378
>gb|AC183294.3| Pan troglodytes BAC clone CH251-545A24 from chromosome 17, complete sequence Length = 173991 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cacacacaaaaatctcataa 37 |||||||||||||||||||| Sbjct: 153003 cacacacaaaaatctcataa 153022
>gb|AC106716.3| Homo sapiens 3 BAC RP11-202P1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152883 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 aagctctcatcaaatactct 128 |||||||||||||||||||| Sbjct: 39367 aagctctcatcaaatactct 39348
>emb|CR478232.3| Zebrafish DNA sequence from clone CH211-86D22 in linkage group 20, complete sequence Length = 27408 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 atcatcatcatttcattttt 317 |||||||||||||||||||| Sbjct: 26929 atcatcatcatttcattttt 26948
>gb|AC139345.8| Papio anubis clone rp41-256p17, complete sequence Length = 179810 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 atcatttcattttttatttg 323 |||||||||||||||||||| Sbjct: 29232 atcatttcattttttatttg 29213
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tcatcatttcattttttatt 321 |||||||||||||||||||| Sbjct: 1700033 tcatcatttcattttttatt 1700014
>gb|AC087173.5| Homo sapiens chromosome 8, clone RP11-713C9, complete sequence Length = 160250 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acaaaaatctcataaaagaa 42 |||||||||||||||||||| Sbjct: 138553 acaaaaatctcataaaagaa 138572
>gb|AY587160.1| Sesamia nonagrioides clone Sn16 trypsin IIb precursor (TrIIb) mRNA, partial cds Length = 661 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 caaccagatcatcaaccacc 491 |||||||||||||||||||| Sbjct: 305 caaccagatcatcaaccacc 324
>gb|AY587159.1| Sesamia nonagrioides clone Sn15 trypsin IIb precursor (TrIIb) mRNA, complete cds Length = 874 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 caaccagatcatcaaccacc 491 |||||||||||||||||||| Sbjct: 291 caaccagatcatcaaccacc 310
>gb|AY587158.1| Sesamia nonagrioides clone Sn14 trypsin IIb precursor (TrIIb) mRNA, partial cds Length = 673 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 caaccagatcatcaaccacc 491 |||||||||||||||||||| Sbjct: 317 caaccagatcatcaaccacc 336
>gb|AY587157.1| Sesamia nonagrioides clone Sn13 trypsin IIb (TrIIb) mRNA, partial cds Length = 801 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 caaccagatcatcaaccacc 491 |||||||||||||||||||| Sbjct: 222 caaccagatcatcaaccacc 241
>gb|AY587147.1| Sesamia nonagrioides clone Sn18 trypsin IIb3 precursor (TrIIb3) gene, complete cds Length = 1137 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 caaccagatcatcaaccacc 491 |||||||||||||||||||| Sbjct: 578 caaccagatcatcaaccacc 597
>gb|AY587145.1| Sesamia nonagrioides clone Sn12 trypsin IIb precursor (TrIIb) gene, complete cds Length = 1028 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 caaccagatcatcaaccacc 491 |||||||||||||||||||| Sbjct: 472 caaccagatcatcaaccacc 491
>gb|AC090735.5| Homo sapiens chromosome 8, clone RP11-1145L24, complete sequence Length = 149089 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aaaaactagtgctaggaaga 156 |||||||||||||||||||| Sbjct: 115736 aaaaactagtgctaggaaga 115717
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tcatcatttcattttttatt 321 |||||||||||||||||||| Sbjct: 1676678 tcatcatttcattttttatt 1676659
>gb|AC154875.8| Mus musculus chromosome 3, clone RP23-14O16, complete sequence Length = 225841 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tgcacacacaaaaatctcataaaa 39 |||||||||| ||||||||||||| Sbjct: 84396 tgcacacacagaaatctcataaaa 84419
>gb|AC087366.5| Homo sapiens chromosome 8, clone RP11-621J21, complete sequence Length = 160454 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acaaaaatctcataaaagaa 42 |||||||||||||||||||| Sbjct: 26510 acaaaaatctcataaaagaa 26529
>emb|BX470168.7| Zebrafish DNA sequence from clone CH211-288L20 in linkage group 6, complete sequence Length = 148605 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tcatcatttcattttttatt 321 |||||||||||||||||||| Sbjct: 101113 tcatcatttcattttttatt 101132
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tcatcatttcattttttatt 321 |||||||||||||||||||| Sbjct: 1602718 tcatcatttcattttttatt 1602699
>emb|BX322791.7| Zebrafish DNA sequence from clone RP71-55E12, complete sequence Length = 127643 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tcatcatttcattttttatt 321 |||||||||||||||||||| Sbjct: 79470 tcatcatttcattttttatt 79489
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tcatcatttcattttttatt 321 |||||||||||||||||||| Sbjct: 1699515 tcatcatttcattttttatt 1699496
>gb|AC142264.6| Mus musculus BAC clone RP24-394K17 from chromosome 6, complete sequence Length = 162570 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tcatcatttcattttttatt 321 |||||||||||||||||||| Sbjct: 138622 tcatcatttcattttttatt 138603
>emb|BX817924.1|CNS0AE66 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL50ZE08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 531 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 atcaatcatcatcatttcattttttatt 321 |||||||||||||| ||||||| ||||| Sbjct: 437 atcaatcatcatcacttcatttattatt 410
>emb|BX814440.1|CNS0AEB5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZH09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 513 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 atcaatcatcatcatttcattttttatt 321 |||||||||||||| ||||||| ||||| Sbjct: 432 atcaatcatcatcacttcatttattatt 405
>emb|BX813404.1|CNS0AEAG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZE11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 453 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 atcaatcatcatcatttcattttttatt 321 |||||||||||||| ||||||| ||||| Sbjct: 412 atcaatcatcatcacttcatttattatt 385
>emb|BX813353.1|CNS0AEBD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 490 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 atcaatcatcatcatttcattttttatt 321 |||||||||||||| ||||||| ||||| Sbjct: 430 atcaatcatcatcacttcatttattatt 403
>emb|BX818607.1|CNS0AE4U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 513 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 atcaatcatcatcatttcattttttatt 321 |||||||||||||| ||||||| ||||| Sbjct: 433 atcaatcatcatcacttcatttattatt 406
>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold Length = 1819346 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 gacagaaataactacaaagctctc 116 ||||||||||||| |||||||||| Sbjct: 409427 gacagaaataacttcaaagctctc 409450
>gb|AC010906.10| Homo sapiens BAC clone RP11-566O4 from 2, complete sequence Length = 208571 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cacacacaaaaatctcataa 37 |||||||||||||||||||| Sbjct: 99277 cacacacaaaaatctcataa 99296
>gb|AC073555.9|AC073555 Arabidopsis thaliana chromosome 1 BAC F11I4 genomic sequence, complete sequence Length = 80561 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 atcaatcatcatcatttcattttttatt 321 |||||||||||||| ||||||| ||||| Sbjct: 25628 atcaatcatcatcacttcatttattatt 25655
>gb|AE004628.1| Pseudomonas aeruginosa PAO1, section 189 of 529 of the complete genome Length = 10962 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 tcgccaggttcgacggcgcc 520 |||||||||||||||||||| Sbjct: 10610 tcgccaggttcgacggcgcc 10591
>gb|AY208123.1| Feline calicivirus capsid protein mRNA, partial cds Length = 518 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 693 cccatgcccgcggtagcgctccac 716 ||||||||||| |||||||||||| Sbjct: 343 cccatgcccgctgtagcgctccac 320
>gb|AC067719.12| Homo sapiens 3 BAC RP11-183L23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172945 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 catcatttcattttttattt 322 |||||||||||||||||||| Sbjct: 8337 catcatttcattttttattt 8356
>gb|AC117471.6| Homo sapiens 3 BAC RP11-558J4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 82165 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 atgaagctgtcatcctttct 290 |||||||||||||||||||| Sbjct: 74980 atgaagctgtcatcctttct 74999
>gb|AC067957.7| Homo sapiens BAC clone RP11-82K13 from 2, complete sequence Length = 165373 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cacacacaaaaatctcataa 37 |||||||||||||||||||| Sbjct: 143362 cacacacaaaaatctcataa 143343
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tcatcatttcattttttatt 321 |||||||||||||||||||| Sbjct: 1669273 tcatcatttcattttttatt 1669254
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tcatcatttcattttttatt 321 |||||||||||||||||||| Sbjct: 1623622 tcatcatttcattttttatt 1623603
>gb|AC005157.1|AC005157 Homo sapiens PAC clone RP5-1108A12 from 14q24.3, complete sequence Length = 164275 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cacacacaaaaatctcataa 37 |||||||||||||||||||| Sbjct: 55726 cacacacaaaaatctcataa 55707
>emb|BX470205.12| Zebrafish DNA sequence from clone DKEYP-118B7 in linkage group 9, complete sequence Length = 41140 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcaaatgaatgaagctgtca 282 |||||||||||||||||||| Sbjct: 20353 gcaaatgaatgaagctgtca 20372
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tcatcatttcattttttatt 321 |||||||||||||||||||| Sbjct: 1734312 tcatcatttcattttttatt 1734293
>gb|AF099810.1|AF099810 Homo sapiens neurexin III-alpha gene, partial cds Length = 193824 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cacacacaaaaatctcataa 37 |||||||||||||||||||| Sbjct: 153676 cacacacaaaaatctcataa 153657
>emb|AL954834.12| Zebrafish DNA sequence from clone CH211-286D20, complete sequence Length = 187914 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 atcatcatcatttcattttt 317 |||||||||||||||||||| Sbjct: 19757 atcatcatcatttcattttt 19776
>gb|AC140358.2| Mus musculus BAC clone RP24-234L7 from 3, complete sequence Length = 160295 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 catcatcatttcattttttatttg 323 ||||||||||||||||||| |||| Sbjct: 123055 catcatcatttcattttttttttg 123032
>emb|AL672074.19| Mouse DNA sequence from clone RP23-404I18 on chromosome X, complete sequence Length = 171593 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tgcacacacaaaaatctcataaaa 39 |||||||||| ||||||||||||| Sbjct: 108233 tgcacacacagaaatctcataaaa 108256
>gb|AC139299.3| Mus musculus BAC clone RP23-335D20 from 1, complete sequence Length = 204848 Score = 40.1 bits (20), Expect = 10.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 12 tagatgcacacacaaaaatctcataaaa 39 ||||| |||||||||||||| ||||||| Sbjct: 97366 tagattcacacacaaaaatcccataaaa 97339
>emb|AL645543.13| Mouse DNA sequence from clone RP23-204P15 on chromosome X, complete sequence Length = 188023 Score = 40.1 bits (20), Expect = 10.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tgcacacacaaaaatctcataaaa 39 ||||||||||||||| |||||||| Sbjct: 142026 tgcacacacaaaaatttcataaaa 142003
>emb|AL132988.4|CNS01DTW Human chromosome 14 DNA sequence BAC R-320M16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157962 Score = 40.1 bits (20), Expect = 10.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 caggatggttcttttctttg 71 |||||||||||||||||||| Sbjct: 78392 caggatggttcttttctttg 78411 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,967,281 Number of Sequences: 3902068 Number of extensions: 7967281 Number of successful extensions: 150643 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 149960 Number of HSP's gapped (non-prelim): 651 length of query: 728 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 705 effective length of database: 17,143,297,704 effective search space: 12086024881320 effective search space used: 12086024881320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
