ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal38j11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC007018.7| Arabidopsis thaliana chromosome 2 clone F5G3 map ... 44 0.15
2gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.58
3ref|XM_387331.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 0.58
4emb|AL035701.13|HS8B1 Human DNA sequence from clone RP1-8B1 on c... 42 0.58
5dbj|D50659.1| Homo sapiens ACTGP9 pseudogene, gamma-actin mRNA-c... 42 0.58
6ref|NG_001069.1| Homo sapiens actin, gamma pseudogene 9 (ACTGP9)... 42 0.58
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.58
8dbj|AK122063.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.58
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.58
10ref|XM_483588.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.3
11ref|XM_705513.1| Candida albicans SC5314 putative U3 snoRNP prot... 40 2.3
12ref|XM_705499.1| Candida albicans SC5314 putative U3 snoRNP prot... 40 2.3
13emb|AL772143.31| Zebrafish DNA sequence from clone CH211-158B22 ... 40 2.3
14emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 40 2.3
15gb|AC008763.9| Homo sapiens chromosome 19 clone CTD-3214H19, com... 40 2.3
16dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
17gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome 2R, r... 40 2.3
18gb|AC084537.1|CBRG26I17 Caenorhabditis briggsae cosmid G26I17, c... 40 2.3
19gb|AC008812.7|AC008812 Homo sapiens chromosome 19 clone CTD-2102... 40 2.3
20dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
21dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
22gb|AY105027.1| Zea mays PCO081602 mRNA sequence 40 2.3
23gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37... 40 2.3
24emb|AL954371.6| Zebrafish DNA sequence from clone CH211-207O15, ... 40 2.3
25ref|NM_111087.3| Arabidopsis thaliana unknown protein AT3G02200 ... 38 9.1
26ref|NM_180663.1| Arabidopsis thaliana unknown protein AT3G02200 ... 38 9.1
27ref|XM_641140.1| Dictyostelium discoideum STE20 family protein k... 38 9.1
28gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, c... 38 9.1
29gb|BT011968.1| Arabidopsis thaliana At3g02200 mRNA sequence 38 9.1
30emb|CR847978.17| Zebrafish DNA sequence from clone CH211-209D14 ... 38 9.1
31ref|XM_805526.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 9.1
32gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BA... 38 9.1
33gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC... 38 9.1
34gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome... 38 9.1
35ref|XM_812584.1| Trypanosoma cruzi strain CL Brener hypothetical... 38 9.1
36gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome... 38 9.1
37gb|AC146218.2| Pan troglodytes BAC clone CH251-267E2 from Y, com... 38 9.1
38gb|BC054639.1| Danio rerio presenilin, mRNA (cDNA clone MGC:6420... 38 9.1
39ref|NM_001017759.1| Danio rerio mitochondrial ribosomal protein ... 38 9.1
40gb|BC093356.1| Danio rerio mitochondrial ribosomal protein S18B,... 38 9.1
41ref|NM_131024.1| Danio rerio presenilin (psen1), mRNA 38 9.1
42gb|AF493143.1| Pseudomonas phage gh-1, complete sequence 38 9.1
43emb|BX052199.1|CNS09CFV Single read from an extremity of a full-... 38 9.1
44gb|AC104518.5| Mus Musculus Strain 129S6/SvEvTac chromosome 17 B... 38 9.1
45gb|AE008819.1| Salmonella typhimurium LT2, section 123 of 220 of... 38 9.1
46gb|AE008743.2| Salmonella typhimurium LT2, section 49 of 220 of ... 38 9.1
47dbj|BS000645.2| Pan troglodytes chromosome Y clone: PTB-520M19, ... 38 9.1
48dbj|BS000539.1| Pan troglodytes chromosome Y clone:PTB-144M03, c... 38 9.1
49dbj|BS000535.1| Pan troglodytes chromosome Y clone:PTB-096E06, c... 38 9.1
50gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 38 9.1
51gb|AY093343.1| Arabidopsis thaliana unknown protein (F14P3.15) m... 38 9.1
52gb|AC022832.13| Homo sapiens chromosome 8, clone RP11-145O15, co... 38 9.1
53gb|AY062722.1| Arabidopsis thaliana Unknown protein (F14P3.15) m... 38 9.1
54ref|XM_691408.1| PREDICTED: Danio rerio similar to mitochondrial... 38 9.1
55gb|AF131221.1|AF131221 Dictyostelium discoideum p21-activated pr... 38 9.1
56dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
57emb|BX510301.6| Zebrafish DNA sequence from clone CH211-215A10 i... 38 9.1
58emb|BX823095.1|CNS0A61M Arabidopsis thaliana Full-length cDNA Co... 38 9.1
59gb|AY011222.1| Ochotona hyperborea adenosine A3 receptor (ADORA3... 38 9.1
60gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 38 9.1
61ref|XM_342552.2| PREDICTED: Rattus norvegicus nuclear receptor c... 38 9.1
62gb|AF228043.1|AF228043 Rattus norvegicus nuclear hormone recepto... 38 9.1
63gb|AF256078.1|AF256078 Drosophila simulans strain sim8 cut prote... 38 9.1
64gb|AF256077.1|AF256077 Drosophila simulans strain sim7 cut prote... 38 9.1
65gb|AF256076.1|AF256076 Drosophila simulans strain sim5 cut prote... 38 9.1
66gb|AF256075.1|AF256075 Drosophila simulans strain sim4 cut prote... 38 9.1
67gb|AF256074.1|AF256074 Drosophila simulans strain sim3 cut prote... 38 9.1
68gb|AF256073.1|AF256073 Drosophila simulans strain sim2 cut prote... 38 9.1
69emb|AJ132931.1|DRE132931 Danio rerio mRNA for presenilin-1 38 9.1
70gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete ... 38 9.1
71dbj|AK068548.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.1
72gb|U51923.3|DDU51923 Dictyostelium discoideum STE20-telated kina... 38 9.1
73gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, co... 38 9.1
74dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complet... 38 9.1
75emb|CR354589.19| Zebrafish DNA sequence from clone CH211-93L13 i... 38 9.1
76dbj|AB084463.1| Pyrus communis PC-EG1 mRNA for endo-1,4-beta-D-g... 38 9.1
77gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 9.1
78emb|AL773593.10| Zebrafish DNA sequence from clone CH211-202N20 ... 38 9.1
79gb|AC142410.4| Mus musculus BAC clone RP24-173I18 from 1, comple... 38 9.1
80dbj|AP004512.1| Lotus japonicus genomic DNA, chromosome 4, clone... 38 9.1
81gb|AC163288.4| Mus musculus BAC clone RP23-279M5 from chromosome... 38 9.1
82dbj|D16683.1|BMOSHOWA Silkworm mRNA, homeobox gene caudal (cad) ... 38 9.1 
>gb|AC007018.7| Arabidopsis thaliana chromosome 2 clone F5G3 map RNS1, complete
            sequence
          Length = 124326

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 7    catcatcatcatctgctggtgg 28
            ||||||||||||||||||||||
Sbjct: 3126 catcatcatcatctgctggtgg 3147
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>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone
             OSJNBb0003F09, complete sequence
          Length = 159600

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 7     catcatcatcatctgctggtggtga 31
             |||||||||||||| ||||||||||
Sbjct: 65777 catcatcatcatcttctggtggtga 65753
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>ref|XM_387331.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07155.1)
            partial mRNA
          Length = 2034

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 105  tgcccaacatgcaatgccccc 125
            |||||||||||||||||||||
Sbjct: 1219 tgcccaacatgcaatgccccc 1239
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>emb|AL035701.13|HS8B1 Human DNA sequence from clone RP1-8B1 on chromosome 6p11.2-21.1
            Contains the ENPP5 gene for ectonucleotide
            pyrophosphatase/phosphodiesterase 5 (putative function),
            the  ENPP4 gene for ectonucleotide
            pyrophosphatase/phosphodiesterase 4 (putative function)
            (NPP4, KIAA0879) and a novel gene, complete sequence
          Length = 126956

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 20   tgctggtggtgacgactgagc 40
            |||||||||||||||||||||
Sbjct: 4371 tgctggtggtgacgactgagc 4391
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>dbj|D50659.1| Homo sapiens ACTGP9 pseudogene, gamma-actin mRNA-corresponding
           region
          Length = 2659

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 20  tgctggtggtgacgactgagc 40
           |||||||||||||||||||||
Sbjct: 204 tgctggtggtgacgactgagc 184
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>ref|NG_001069.1| Homo sapiens actin, gamma pseudogene 9 (ACTGP9) on chromosome 6
          Length = 2659

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 20  tgctggtggtgacgactgagc 40
           |||||||||||||||||||||
Sbjct: 204 tgctggtggtgacgactgagc 184
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 7        catcatcatcatctgctggtggtga 31
                |||||||||||||| ||||||||||
Sbjct: 26940810 catcatcatcatcttctggtggtga 26940786
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>dbj|AK122063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115K11, full
           insert sequence
          Length = 1791

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 7   catcatcatcatctgctggtggtga 31
           |||||||||||||| ||||||||||
Sbjct: 346 catcatcatcatcttctggtggtga 322
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 7        catcatcatcatctgctggtggtga 31
                |||||||||||||| ||||||||||
Sbjct: 26868980 catcatcatcatcttctggtggtga 26868956
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>ref|XM_483588.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1389

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 5   tgcatcatcatcatctgctggtggtgacgactgagctcct 44
           |||||||||||||| | ||||||||||  || ||||||||
Sbjct: 177 tgcatcatcatcattttctggtggtgagtacggagctcct 138
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>ref|XM_705513.1| Candida albicans SC5314 putative U3 snoRNP protein Utp30
           (CaO19.154), mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 7   catcatcatcatctgctggtggtg 30
           ||||||||||||||| ||||||||
Sbjct: 133 catcatcatcatctggtggtggtg 110
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>ref|XM_705499.1| Candida albicans SC5314 putative U3 snoRNP protein Utp30
           (CaO19.7793), mRNA
          Length = 1110

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 7   catcatcatcatctgctggtggtg 30
           ||||||||||||||| ||||||||
Sbjct: 133 catcatcatcatctggtggtggtg 110
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>emb|AL772143.31| Zebrafish DNA sequence from clone CH211-158B22 in linkage group 20,
             complete sequence
          Length = 73696

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     tgcatcatcatcatctgctg 24
             ||||||||||||||||||||
Sbjct: 58835 tgcatcatcatcatctgctg 58816
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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 111     acatgcaatgcccccatctccttg 134
               ||||| ||||||||||||||||||
Sbjct: 1857237 acatgaaatgcccccatctccttg 1857214
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>gb|AC008763.9| Homo sapiens chromosome 19 clone CTD-3214H19, complete sequence
          Length = 177962

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 123    cccatctccttggttgctgcatcc 146
              ||||||||||||||||| ||||||
Sbjct: 151511 cccatctccttggttgcagcatcc 151488
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 5        tgcatcatcatcatctgctggtggtgacgactgagctcct 44
                |||||||||||||| | ||||||||||  || ||||||||
Sbjct: 27119244 tgcatcatcatcattttctggtggtgagtacggagctcct 27119283
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>gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome 2R, region 51B-51C, BAC clone
              BACR03K23, complete sequence
          Length = 160346

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      catcatcatcatctgctggtggtg 30
              ||||||| ||||||||||||||||
Sbjct: 145792 catcatcctcatctgctggtggtg 145815
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>gb|AC084537.1|CBRG26I17 Caenorhabditis briggsae cosmid G26I17, complete sequence
          Length = 19144

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     tgcatcatcatcatctgctg 24
             ||||||||||||||||||||
Sbjct: 11050 tgcatcatcatcatctgctg 11069
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>gb|AC008812.7|AC008812 Homo sapiens chromosome 19 clone CTD-2102F19, complete sequence
          Length = 143619

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 123   cccatctccttggttgctgcatcc 146
             ||||||||||||||||| ||||||
Sbjct: 23809 cccatctccttggttgcagcatcc 23786
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>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1521_G02
          Length = 117964

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 5     tgcatcatcatcatctgctggtggtgacgactgagctcct 44
             |||||||||||||| | ||||||||||  || ||||||||
Sbjct: 20277 tgcatcatcatcattttctggtggtgagtacggagctcct 20316
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>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1211_G06
          Length = 96421

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 5     tgcatcatcatcatctgctggtggtgacgactgagctcct 44
             |||||||||||||| | ||||||||||  || ||||||||
Sbjct: 90331 tgcatcatcatcattttctggtggtgagtacggagctcct 90370
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>gb|AY105027.1| Zea mays PCO081602 mRNA sequence
          Length = 1570

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 103 tttgcccaacatgcaatgcccccatctccttggttg 138
           |||| |||||||||| |||  |||||||||||||||
Sbjct: 276 tttgtccaacatgcagtgcatccatctccttggttg 241
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>gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37 of 73 of the complete
              sequence
          Length = 266851

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      catcatcatcatctgctggtggtg 30
              ||||||| ||||||||||||||||
Sbjct: 238135 catcatcctcatctgctggtggtg 238158
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>emb|AL954371.6| Zebrafish DNA sequence from clone CH211-207O15, complete sequence
          Length = 124954

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    ttgctatctgacgcattttt 79
             ||||||||||||||||||||
Sbjct: 77653 ttgctatctgacgcattttt 77634
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>ref|NM_111087.3| Arabidopsis thaliana unknown protein AT3G02200 transcript variant
            AT3G02200.2 mRNA, complete cds
          Length = 1587

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 6    gcatcatcatcatctgctg 24
            |||||||||||||||||||
Sbjct: 1297 gcatcatcatcatctgctg 1315
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>ref|NM_180663.1| Arabidopsis thaliana unknown protein AT3G02200 transcript variant
            AT3G02200.1 mRNA, complete cds
          Length = 1591

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 6    gcatcatcatcatctgctg 24
            |||||||||||||||||||
Sbjct: 1301 gcatcatcatcatctgctg 1319
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>ref|XM_641140.1| Dictyostelium discoideum STE20 family protein kinase (DDB0191313),
            partial mRNA
          Length = 3594

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 9    tcatcatcatctgctggtggtga 31
            |||||||||||| ||||||||||
Sbjct: 1555 tcatcatcatctactggtggtga 1577
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>gb|AC116739.13| Mus musculus chromosome 17, clone RP23-435B24, complete sequence
          Length = 222382

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      cttgtgcatcatcatcatc 19
              |||||||||||||||||||
Sbjct: 147514 cttgtgcatcatcatcatc 147532
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>gb|BT011968.1| Arabidopsis thaliana At3g02200 mRNA sequence
          Length = 1251

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 6    gcatcatcatcatctgctg 24
            |||||||||||||||||||
Sbjct: 1204 gcatcatcatcatctgctg 1222
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>emb|CR847978.17| Zebrafish DNA sequence from clone CH211-209D14 in linkage group 3,
             complete sequence
          Length = 194437

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    catttttcagaatatcgtt 91
             |||||||||||||||||||
Sbjct: 33451 catttttcagaatatcgtt 33433
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>ref|XM_805526.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509127.40) partial mRNA
          Length = 1623

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 126 atctccttggttgctgcatccgt 148
           ||||||||| |||||||||||||
Sbjct: 290 atctccttgattgctgcatccgt 268
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>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence,
           complete sequence
          Length = 103960

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 6   gcatcatcatcatctgctg 24
           |||||||||||||||||||
Sbjct: 465 gcatcatcatcatctgctg 447
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>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence,
             complete sequence
          Length = 94369

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     gcatcatcatcatctgctg 24
             |||||||||||||||||||
Sbjct: 66009 gcatcatcatcatctgctg 65991
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>gb|AC124385.3| Mus musculus BAC clone RP24-421A2 from chromosome 1, complete sequence
          Length = 163778

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     gtggtgacgactgagctcc 43
              |||||||||||||||||||
Sbjct: 140126 gtggtgacgactgagctcc 140144
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>ref|XM_812584.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508737.140) partial mRNA
          Length = 1617

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 126 atctccttggttgctgcatccgt 148
           ||||||||| |||||||||||||
Sbjct: 290 atctccttgattgctgcatccgt 268
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>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0074L11, complete sequence
          Length = 180703

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     cttgtgcatcatcatcatc 19
             |||||||||||||||||||
Sbjct: 52680 cttgtgcatcatcatcatc 52662
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>gb|AC146218.2| Pan troglodytes BAC clone CH251-267E2 from Y, complete sequence
          Length = 203014

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 123    cccatctccttggttgctgcatc 145
              ||||||||||||||||| |||||
Sbjct: 139747 cccatctccttggttgcggcatc 139769
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>gb|BC054639.1| Danio rerio presenilin, mRNA (cDNA clone MGC:64206 IMAGE:6798982),
            complete cds
          Length = 2427

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 12   tcatcatctgctggtggtg 30
            |||||||||||||||||||
Sbjct: 1159 tcatcatctgctggtggtg 1141
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>ref|NM_001017759.1| Danio rerio mitochondrial ribosomal protein S18B (mrps18b), mRNA
          Length = 1151

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 2   ttgtgcatcatcatcatctgctg 24
           |||||||||||| ||||||||||
Sbjct: 142 ttgtgcatcatcttcatctgctg 164
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>gb|BC093356.1| Danio rerio mitochondrial ribosomal protein S18B, mRNA (cDNA clone
           MGC:112517 IMAGE:7417977), complete cds
          Length = 1151

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 2   ttgtgcatcatcatcatctgctg 24
           |||||||||||| ||||||||||
Sbjct: 142 ttgtgcatcatcttcatctgctg 164
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>ref|NM_131024.1| Danio rerio presenilin (psen1), mRNA
          Length = 2373

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 12   tcatcatctgctggtggtg 30
            |||||||||||||||||||
Sbjct: 1149 tcatcatctgctggtggtg 1131
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>gb|AF493143.1| Pseudomonas phage gh-1, complete sequence
          Length = 37359

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 19   ctgctggtggtgacgactg 37
            |||||||||||||||||||
Sbjct: 7840 ctgctggtggtgacgactg 7858
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>emb|BX052199.1|CNS09CFV Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC3AG05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 468

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 14  atcatctgctggtggtgac 32
           |||||||||||||||||||
Sbjct: 442 atcatctgctggtggtgac 460
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>gb|AC104518.5| Mus Musculus Strain 129S6/SvEvTac chromosome 17 BAC, RP22-187D17,
             Complete Sequence, complete sequence
          Length = 163367

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     cttgtgcatcatcatcatc 19
             |||||||||||||||||||
Sbjct: 68334 cttgtgcatcatcatcatc 68316
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>gb|AE008819.1| Salmonella typhimurium LT2, section 123 of 220 of the complete genome
          Length = 22108

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 71   cgcatttttcagaatatcg 89
            |||||||||||||||||||
Sbjct: 7381 cgcatttttcagaatatcg 7363
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>gb|AE008743.2| Salmonella typhimurium LT2, section 49 of 220 of the complete genome
          Length = 62027

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 71    cgcatttttcagaatatcg 89
             |||||||||||||||||||
Sbjct: 24749 cgcatttttcagaatatcg 24767
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>dbj|BS000645.2| Pan troglodytes chromosome Y clone: PTB-520M19, complete sequence
          Length = 166301

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 123   cccatctccttggttgctgcatc 145
             ||||||||||||||||| |||||
Sbjct: 17057 cccatctccttggttgcggcatc 17035
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>dbj|BS000539.1| Pan troglodytes chromosome Y clone:PTB-144M03, complete sequences
          Length = 21701

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 123   cccatctccttggttgctgcatc 145
             ||||||||||||||||| |||||
Sbjct: 15587 cccatctccttggttgcggcatc 15609
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>dbj|BS000535.1| Pan troglodytes chromosome Y clone:PTB-096E06, complete sequences
          Length = 198405

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 123    cccatctccttggttgctgcatc 145
              ||||||||||||||||| |||||
Sbjct: 129063 cccatctccttggttgcggcatc 129085
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 123      cccatctccttggttgctgcatc 145
                ||||||||||||||||| |||||
Sbjct: 19415336 cccatctccttggttgcggcatc 19415358
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>gb|AY093343.1| Arabidopsis thaliana unknown protein (F14P3.15) mRNA, complete cds
          Length = 1353

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 6    gcatcatcatcatctgctg 24
            |||||||||||||||||||
Sbjct: 1207 gcatcatcatcatctgctg 1225
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>gb|AC022832.13| Homo sapiens chromosome 8, clone RP11-145O15, complete sequence
          Length = 166236

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 69    gacgcatttttcagaatat 87
             |||||||||||||||||||
Sbjct: 27879 gacgcatttttcagaatat 27861
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>gb|AY062722.1| Arabidopsis thaliana Unknown protein (F14P3.15) mRNA, complete cds
          Length = 1568

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 6    gcatcatcatcatctgctg 24
            |||||||||||||||||||
Sbjct: 1297 gcatcatcatcatctgctg 1315
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>ref|XM_691408.1| PREDICTED: Danio rerio similar to mitochondrial ribosomal protein
           S18-2 (LOC573662), mRNA
          Length = 1114

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 2   ttgtgcatcatcatcatctgctg 24
           |||||||||||| ||||||||||
Sbjct: 161 ttgtgcatcatcttcatctgctg 183
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>gb|AF131221.1|AF131221 Dictyostelium discoideum p21-activated protein kinase PakA (pakA)
            mRNA, complete cds
          Length = 3672

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 9    tcatcatcatctgctggtggtga 31
            |||||||||||| ||||||||||
Sbjct: 1606 tcatcatcatctactggtggtga 1628
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 1        cttgtgcatcatcatcatc 19
                |||||||||||||||||||
Sbjct: 21700627 cttgtgcatcatcatcatc 21700609
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>emb|BX510301.6| Zebrafish DNA sequence from clone CH211-215A10 in linkage group 19,
              complete sequence
          Length = 209585

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 2      ttgtgcatcatcatcatctgctg 24
              |||||||||||| ||||||||||
Sbjct: 194473 ttgtgcatcatcttcatctgctg 194451
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>emb|BX823095.1|CNS0A61M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB8ZA08 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1381

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 6    gcatcatcatcatctgctg 24
            |||||||||||||||||||
Sbjct: 1183 gcatcatcatcatctgctg 1201
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>gb|AY011222.1| Ochotona hyperborea adenosine A3 receptor (ADORA3) gene, partial
           cds
          Length = 321

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 117 aatgcccccatctccttgg 135
           |||||||||||||||||||
Sbjct: 167 aatgcccccatctccttgg 149
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 5      tgcatcatcatcatctgctggtg 27
              |||||||||||||| ||||||||
Sbjct: 958777 tgcatcatcatcatgtgctggtg 958755
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>ref|XM_342552.2| PREDICTED: Rattus norvegicus nuclear receptor coactivator 6 (Ncoa6),
            mRNA
          Length = 6843

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 6    gcatcatcatcatctgctg 24
            |||||||||||||||||||
Sbjct: 3246 gcatcatcatcatctgctg 3228
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>gb|AF228043.1|AF228043 Rattus norvegicus nuclear hormone receptor
           co-regulator/co-activator mRNA, partial cds
          Length = 872

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 6   gcatcatcatcatctgctg 24
           |||||||||||||||||||
Sbjct: 592 gcatcatcatcatctgctg 574
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>gb|AF256078.1|AF256078 Drosophila simulans strain sim8 cut protein (ct) gene, partial cds
          Length = 1090

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 7   catcatcatcatctgctgg 25
           |||||||||||||||||||
Sbjct: 350 catcatcatcatctgctgg 332
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>gb|AF256077.1|AF256077 Drosophila simulans strain sim7 cut protein (ct) gene, partial cds
          Length = 1090

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 7   catcatcatcatctgctgg 25
           |||||||||||||||||||
Sbjct: 350 catcatcatcatctgctgg 332
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>gb|AF256076.1|AF256076 Drosophila simulans strain sim5 cut protein (ct) gene, partial cds
          Length = 1090

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 7   catcatcatcatctgctgg 25
           |||||||||||||||||||
Sbjct: 350 catcatcatcatctgctgg 332
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>gb|AF256075.1|AF256075 Drosophila simulans strain sim4 cut protein (ct) gene, partial cds
          Length = 1090

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 7   catcatcatcatctgctgg 25
           |||||||||||||||||||
Sbjct: 350 catcatcatcatctgctgg 332
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>gb|AF256074.1|AF256074 Drosophila simulans strain sim3 cut protein (ct) gene, partial cds
          Length = 1090

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 7   catcatcatcatctgctgg 25
           |||||||||||||||||||
Sbjct: 350 catcatcatcatctgctgg 332
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>gb|AF256073.1|AF256073 Drosophila simulans strain sim2 cut protein (ct) gene, partial cds
          Length = 1090

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 7   catcatcatcatctgctgg 25
           |||||||||||||||||||
Sbjct: 350 catcatcatcatctgctgg 332
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>emb|AJ132931.1|DRE132931 Danio rerio mRNA for presenilin-1
          Length = 2428

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 12   tcatcatctgctggtggtg 30
            |||||||||||||||||||
Sbjct: 1165 tcatcatctgctggtggtg 1147
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>gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete sequence
          Length = 214016

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      ttgtgcatcatcatcatct 20
              |||||||||||||||||||
Sbjct: 113613 ttgtgcatcatcatcatct 113631
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>dbj|AK068548.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155D03, full
            insert sequence
          Length = 1784

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 1    cttgtgcatcatcatcatc 19
            |||||||||||||||||||
Sbjct: 1557 cttgtgcatcatcatcatc 1539
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>gb|U51923.3|DDU51923 Dictyostelium discoideum STE20-telated kinase DPAK1 (dpak1) mRNA,
            complete cds
          Length = 3626

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 9    tcatcatcatctgctggtggtga 31
            |||||||||||| ||||||||||
Sbjct: 1570 tcatcatcatctactggtggtga 1592
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>gb|AC110562.17| Mus musculus chromosome 17, clone RP23-268M4, complete sequence
          Length = 165190

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      cttgtgcatcatcatcatc 19
              |||||||||||||||||||
Sbjct: 156711 cttgtgcatcatcatcatc 156693
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>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence
          Length = 210614

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 40     ctcctcccgtggcgccacc 58
              |||||||||||||||||||
Sbjct: 170440 ctcctcccgtggcgccacc 170458
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>emb|CR354589.19| Zebrafish DNA sequence from clone CH211-93L13 in linkage group 17,
             complete sequence
          Length = 114273

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 13    catcatctgctggtggtga 31
             |||||||||||||||||||
Sbjct: 53066 catcatctgctggtggtga 53084
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>dbj|AB084463.1| Pyrus communis PC-EG1 mRNA for endo-1,4-beta-D-glucanase, encodes
            membrane-spanning domain, complete cds
          Length = 2242

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 134  ggttgctgcatccgtgctacccccagc 160
            |||||| |||||||||||||| |||||
Sbjct: 1043 ggttgccgcatccgtgctaccaccagc 1017
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 1        cttgtgcatcatcatcatc 19
                |||||||||||||||||||
Sbjct: 22010826 cttgtgcatcatcatcatc 22010808
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>emb|AL773593.10| Zebrafish DNA sequence from clone CH211-202N20 in linkage group 5,
              complete sequence
          Length = 202726

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      ttgtgcatcatcatcatct 20
              |||||||||||||||||||
Sbjct: 131544 ttgtgcatcatcatcatct 131562
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>gb|AC142410.4| Mus musculus BAC clone RP24-173I18 from 1, complete sequence
          Length = 145213

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    gtggtgacgactgagctcc 43
             |||||||||||||||||||
Sbjct: 95406 gtggtgacgactgagctcc 95388
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>dbj|AP004512.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10L16, TM0042,
             complete sequence
          Length = 85815

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     ttgtgcatcatcatcatct 20
             |||||||||||||||||||
Sbjct: 29138 ttgtgcatcatcatcatct 29120
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>gb|AC163288.4| Mus musculus BAC clone RP23-279M5 from chromosome 8, complete sequence
          Length = 222867

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     cttgtgcatcatcatcatc 19
             |||||||||||||||||||
Sbjct: 70781 cttgtgcatcatcatcatc 70799
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>dbj|D16683.1|BMOSHOWA Silkworm mRNA, homeobox gene caudal (cad) homologue, complete cds
          Length = 2167

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 12  tcatcatctgctggtggtg 30
           |||||||||||||||||||
Sbjct: 725 tcatcatctgctggtggtg 707


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,726,210
Number of Sequences: 3902068
Number of extensions: 1726210
Number of successful extensions: 241139
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 240559
Number of HSP's gapped (non-prelim): 580
length of query: 185
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 163
effective length of database: 17,147,199,772
effective search space: 2794993562836
effective search space used: 2794993562836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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