ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal38i16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate c... 192 2e-46
2emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosp... 176 1e-41
3emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precur... 174 4e-41
4emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical pr... 174 4e-41
5gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisp... 168 2e-39
6emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precur... 161 6e-37
7gb|AC117757.23| Mus musculus chromosome 1, clone RP24-420I4, com... 46 0.024
8gb|AC116419.32| Mus musculus chromosome 1, clone RP24-89C10, com... 46 0.024
9ref|XM_728614.1| Plasmodium chabaudi chabaudi hypothetical prote... 44 0.095
10emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chro... 42 0.38
11emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on ch... 42 0.38
12emb|AL357353.12| Human DNA sequence from clone RP11-251L16 on ch... 42 0.38
13gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome ... 42 0.38
14emb|AL590997.13| Mouse DNA sequence from clone RP23-132J20 on ch... 42 0.38
15gb|AC134662.11| Mus musculus chromosome 15, clone RP24-445D14, c... 40 1.5
16gb|AC115930.10| Mus musculus chromosome 3, clone RP24-534H10, co... 40 1.5
17gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, comp... 40 1.5
18gb|AC112739.5| Rattus norvegicus 7 BAC CH230-108A12 (Children's ... 40 1.5
19gb|AC133464.11| Mus musculus chromosome 16, clone RP24-459O21, c... 40 1.5
20gb|AC140799.6| Mus musculus chromosome 15, clone RP24-147N23, co... 40 1.5
21gb|AC145800.2| Xenopus tropicalis clone CH216-60E16, complete se... 40 1.5
22gb|AC122913.4| Mus musculus BAC clone RP23-25J21 from 3, complet... 40 1.5
23ref|XM_669305.1| Plasmodium berghei strain ANKA hypothetical pro... 40 1.5
24emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chrom... 40 1.5
25ref|NM_001002110.1| Danio rerio zgc:86839 (zgc:86839), mRNA 40 1.5
26gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105... 40 1.5
27emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 i... 40 1.5
28gb|BC071486.1| Danio rerio zgc:86839, mRNA (cDNA clone MGC:86839... 40 1.5
29emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in ... 40 1.5
30gb|AC091827.2| Homo sapiens chromosome 5 clone CTD-2006A19, comp... 40 1.5
31gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome ... 40 1.5
32dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.5
33gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosom... 40 1.5
34gb|AC124982.13| Mus musculus chromosome 3, clone RP24-173F6, com... 40 1.5
35emb|BX005292.13| Mouse DNA sequence from clone RP24-407G18 on ch... 40 1.5
36dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.5
37emb|CT573031.6| Mouse DNA sequence from clone RP24-244H14 on chr... 40 1.5
38dbj|AP002004.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 1.5
39gb|AC133943.3| Mus musculus BAC clone RP24-104D12 from 3, comple... 40 1.5
40emb|AL603792.12| Mouse DNA sequence from clone RP23-328B4 on chr... 40 1.5
41emb|AL772312.6| Mouse DNA sequence from clone RP23-91D16 on chro... 40 1.5
42emb|AL731789.9| Mouse DNA sequence from clone RP23-52F6 on chrom... 40 1.5
43gb|AC165075.3| Mus musculus BAC clone RP24-465N15 from chromosom... 38 5.9
44gb|AC150542.2| Bos taurus BAC CH240-382E8 (Children's Hospital ... 38 5.9
45gb|AC144860.2| Mus musculus BAC clone RP24-133K9 from chromosome... 38 5.9
46gb|AC127224.3| Mus musculus BAC clone RP24-498F21 from chromosom... 38 5.9
47gb|AC163492.3| Mus musculus chromosome 18, clone RP23-411L20, co... 38 5.9
48gb|AC090443.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 38 5.9
49gb|AC164156.2| Mus musculus BAC clone RP24-549I8 from chromosome... 38 5.9
50gb|AC132358.3| Mus musculus BAC clone RP24-133O24 from chromosom... 38 5.9
51gb|AC120548.15| Mus musculus chromosome 17, clone RP23-211H11, c... 38 5.9
52gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, com... 38 5.9
53gb|AC123796.2| Mus musculus BAC clone RP24-320P9 from chromosome... 38 5.9
54gb|AC121971.3| Mus musculus BAC clone RP24-275H22 from chromosom... 38 5.9
55gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome... 38 5.9
56gb|AC117218.3| Mus musculus BAC clone RP23-344B4 from 15, comple... 38 5.9
57gb|AC116731.9| Mus musculus chromosome 8, clone RP23-346D17, com... 38 5.9
58gb|AC160965.4| Mus musculus BAC clone RP24-334E4 from chromosome... 38 5.9
59emb|AL139811.30| Human DNA sequence from clone RP11-75A9 on chro... 38 5.9
60emb|AL135902.16| Human DNA sequence from clone RP11-204P2 on chr... 38 5.9
61emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BA... 38 5.9
62gb|AC022018.10| Homo sapiens chromosome 10 clone RP11-214N15, co... 38 5.9
63emb|AL645808.13| Mouse DNA sequence from clone RP23-427P14 on ch... 38 5.9
64gb|AC124864.3| Homo sapiens BAC clone RP11-570J4 from 4, complet... 38 5.9
65gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, comp... 38 5.9
66gb|AC015743.9| Homo sapiens chromosome 8, clone RP11-1G11, compl... 38 5.9
67dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 38 5.9
68gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, compl... 38 5.9
69gb|AC008525.7|AC008525 Homo sapiens chromosome 5 clone CTC-467M3... 38 5.9
70dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.9
71gb|AC074270.25|AC074270 Homo sapiens 12 BAC RP11-84G21 (Roswell ... 38 5.9
72gb|AC158237.2| Mus musculus BAC clone RP23-142I8 from chromosome... 38 5.9
73gb|AC011241.7| Homo sapiens BAC clone RP11-467P13 from 2, comple... 38 5.9
74gb|AC116534.7| Homo sapiens chromosome 11, clone RP11-265F24, co... 38 5.9
75gb|AC154302.1| Mus musculus BAC clone RP23-378K2 from chromosome... 38 5.9
76dbj|AP007208.1| Mus musculus molossinus genomic DNA, chromosome ... 38 5.9
77dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.9
78emb|AL935129.25| Mouse DNA sequence from clone RP23-181O3 on chr... 38 5.9
79emb|AL929164.12| Mouse DNA sequence from clone RP23-226L18 on ch... 38 5.9
80gb|AC154022.2| Mus musculus 6 BAC RP24-402L3 (Roswell Park Cance... 38 5.9
81gb|AC109499.21| Mus musculus chromosome 18, clone RP23-349E12, c... 38 5.9
82gb|AC079444.28| Mus musculus strain C57BL/6J chromosome 10 clone... 38 5.9
83gb|AC079681.38| Mus musculus strain C57BL/6J chromosome 10 clone... 38 5.9
84gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, co... 38 5.9
85gb|AC162937.6| Mus musculus BAC clone RP23-120I8 from chromosome... 38 5.9
86gb|AC112267.4| Mus musculus BAC clone RP24-84L8 from 9, complete... 38 5.9
87gb|AC128704.4| Mus musculus BAC clone RP23-436H14 from 3, comple... 38 5.9
88emb|CT025622.9| Mouse DNA sequence from clone RP23-443N15 on chr... 38 5.9
89gb|AC015564.13| Homo sapiens chromosome 8, clone RP11-351D9, com... 38 5.9
90gb|AC171201.1| Mus musculus BAC clone RP24-303H7 from chromosome... 38 5.9
91emb|AJ488903.1|HCF488903 Heterostegina cf. operculinoides partia... 38 5.9
92emb|AJ488902.1|HDE488902 Heterostegina depressa partial 28S rRNA... 38 5.9
93emb|AJ488901.1|HDE488901 Heterostegina depressa partial 28S rRNA... 38 5.9
94emb|AJ488900.1|HDE488900 Heterostegina depressa partial 28S rRNA... 38 5.9
95emb|AL683810.10| Mouse DNA sequence from clone RP23-10L18 on chr... 38 5.9
96gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, co... 38 5.9
97emb|AL808103.8| Mouse DNA sequence from clone RP23-301G2 on chro... 38 5.9
98emb|AL450399.16| Mouse DNA sequence from clone RP23-286I5 on chr... 38 5.9
99emb|AL732428.7| Mouse DNA sequence from clone RP23-347P2 on chro... 38 5.9 
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit
           mRNA, complete cds
          Length = 816

 Score =  192 bits (97), Expect = 2e-46
 Identities = 120/125 (96%), Gaps = 2/125 (1%)
 Strand = Plus / Minus

                                                                       
Query: 2   cgacagattgtataatattatgtgcatgtgcatatacatagcaaccgatagcattcacat 61
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 759 cgacagattgtataatattatgtgcatgtgcatatacatagccaccgatagcattcacat 700

                                                                       
Query: 62  acgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacatttttagg 121
           ||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||
Sbjct: 699 acgagcatgctttctcgag-catgttggtacatgaacatgggactacacaca-ttttagg 642

                
Query: 122 aacaa 126
           |||||
Sbjct: 641 aacaa 637
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>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate
           carboxylase/oxygenase, small subunit
          Length = 837

 Score =  176 bits (89), Expect = 1e-41
 Identities = 116/125 (92%)
 Strand = Plus / Minus

                                                                       
Query: 2   cgacagattgtataatattatgtgcatgtgcatatacatagcaaccgatagcattcacat 61
           ||||| |||||||||||||||| |   ||||||||||||||| |||||||||||||||||
Sbjct: 795 cgacatattgtataatattatgcgtccgtgcatatacatagccaccgatagcattcacat 736

                                                                       
Query: 62  acgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacatttttagg 121
           ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||
Sbjct: 735 acgagcatgctttctcgagccatgttggtacatgaacatggacatacacatattcttagg 676

                
Query: 122 aacaa 126
           |||||
Sbjct: 675 aacaa 671
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>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39) (ribulosebisphosphate carboxylase, clone 512)
          Length = 611

 Score =  174 bits (88), Expect = 4e-41
 Identities = 118/127 (92%), Gaps = 2/127 (1%)
 Strand = Plus / Minus

                                                                       
Query: 2   cgacagattgtataatat--tatgtgcatgtgcatatacatagcaaccgatagcattcac 59
           ||||||||||||||||||  |||||||||||||||||||||||| |||||| ||||||||
Sbjct: 565 cgacagattgtataatatattatgtgcatgtgcatatacatagccaccgattgcattcac 506

                                                                       
Query: 60  atacgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacattttta 119
           ||||||||| ||||||||||||||||||| ||||||||||||| |||||||| ||| |||
Sbjct: 505 atacgagcacgctttctcgagccatgttgttacatgaacatggacatacacatattctta 446

                  
Query: 120 ggaacaa 126
           |||||||
Sbjct: 445 ggaacaa 439
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>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9
          Length = 875

 Score =  174 bits (88), Expect = 4e-41
 Identities = 115/124 (92%)
 Strand = Plus / Minus

                                                                       
Query: 3   gacagattgtataatattatgtgcatgtgcatatacatagcaaccgatagcattcacata 62
           |||| |||||||||||||||| |   ||||||||||||||| ||||||||||||||||||
Sbjct: 834 gacatattgtataatattatgcgtccgtgcatatacatagccaccgatagcattcacata 775

                                                                       
Query: 63  cgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacatttttagga 122
           |||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct: 774 cgagcatgctttctcgagccatgttggtacatgaacatggacatacacatattcttagga 715

               
Query: 123 acaa 126
           ||||
Sbjct: 714 acaa 711
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>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase
           small subunit mRNA, clone pTS406, 3' end
          Length = 317

 Score =  168 bits (85), Expect = 2e-39
 Identities = 115/125 (92%)
 Strand = Plus / Minus

                                                                       
Query: 2   cgacagattgtataatattatgtgcatgtgcatatacatagcaaccgatagcattcacat 61
           ||||| |||||||||||||||| |   ||||||||||||||| |||||||||||||||||
Sbjct: 288 cgacatattgtataatattatgcgtccgtgcatatacatagccaccgatagcattcacat 229

                                                                       
Query: 62  acgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacatttttagg 121
           |||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||
Sbjct: 228 acgagcatgctttctcgagccatgttcgtacatgaacatggacatacacatattcttagg 169

                
Query: 122 aacaa 126
           |||||
Sbjct: 168 aacaa 164
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>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
           4.1.1.39 ribulosebisphosphate carboxylase) clones 234
           and 406
          Length = 743

 Score =  161 bits (81), Expect = 6e-37
 Identities = 114/125 (91%)
 Strand = Plus / Minus

                                                                       
Query: 2   cgacagattgtataatattatgtgcatgtgcatatacatagcaaccgatagcattcacat 61
           ||||| |||||||||||||||| |   || |||||||||||| ||||||||||||| |||
Sbjct: 714 cgacatattgtataatattatgcgtccgttcatatacatagccaccgatagcattctcat 655

                                                                       
Query: 62  acgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacatttttagg 121
           ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||
Sbjct: 654 acgagcatgctttctcgagccatgttggtacatgaacatggacatacacatattcttagg 595

                
Query: 122 aacaa 126
           |||||
Sbjct: 594 aacaa 590
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>gb|AC117757.23| Mus musculus chromosome 1, clone RP24-420I4, complete sequence
          Length = 183087

 Score = 46.1 bits (23), Expect = 0.024
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 18    attatgtgcatgtgcatatacat 40
             |||||||||||||||||||||||
Sbjct: 10353 attatgtgcatgtgcatatacat 10375
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>gb|AC116419.32| Mus musculus chromosome 1, clone RP24-89C10, complete sequence
          Length = 229522

 Score = 46.1 bits (23), Expect = 0.024
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 18    attatgtgcatgtgcatatacat 40
             |||||||||||||||||||||||
Sbjct: 27510 attatgtgcatgtgcatatacat 27488
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>ref|XM_728614.1| Plasmodium chabaudi chabaudi hypothetical protein (PC403997.00.0)
           partial mRNA
          Length = 210

 Score = 44.1 bits (22), Expect = 0.095
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 21  atgtgcatgtgcatatacatag 42
           ||||||||||||||||||||||
Sbjct: 145 atgtgcatgtgcatatacatag 124
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>emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chromosome 9, complete
             sequence
          Length = 196093

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    tatgtgcatgtgcatatacat 40
             |||||||||||||||||||||
Sbjct: 29098 tatgtgcatgtgcatatacat 29118
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>emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on chromosome 10 Contains a
             ribosomal protein S6 (RPS6) pseudogene, complete sequence
          Length = 169841

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 97    acatgggcatacacacatttttagg 121
             ||||||||||||| |||||||||||
Sbjct: 10408 acatgggcatacatacatttttagg 10432
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>emb|AL357353.12| Human DNA sequence from clone RP11-251L16 on chromosome 10, complete
             sequence
          Length = 129800

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    ttatgtgcatgtgcatataca 39
             |||||||||||||||||||||
Sbjct: 47010 ttatgtgcatgtgcatataca 46990
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>gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome 5, complete sequence
          Length = 215189

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    tatgtgcatgtgcatatacat 40
             |||||||||||||||||||||
Sbjct: 62620 tatgtgcatgtgcatatacat 62600
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>emb|AL590997.13| Mouse DNA sequence from clone RP23-132J20 on chromosome 11, complete
             sequence
          Length = 200602

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    tatgtgcatgtgcatatacat 40
             |||||||||||||||||||||
Sbjct: 18429 tatgtgcatgtgcatatacat 18449
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>gb|AC134662.11| Mus musculus chromosome 15, clone RP24-445D14, complete sequence
          Length = 177038

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   tgtgcatgtgcatatacata 41
            ||||||||||||||||||||
Sbjct: 6860 tgtgcatgtgcatatacata 6841
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>gb|AC115930.10| Mus musculus chromosome 3, clone RP24-534H10, complete sequence
          Length = 158041

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     tattatgtgcatgtgcatat 36
              ||||||||||||||||||||
Sbjct: 142505 tattatgtgcatgtgcatat 142486
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>gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, complete sequence
          Length = 195286

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 90     tacatgaacatgggcatacacaca 113
              |||||||||||| |||||||||||
Sbjct: 130026 tacatgaacatgtgcatacacaca 130049
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>gb|AC112739.5| Rattus norvegicus 7 BAC CH230-108A12 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 234420

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     acatgaacatgggcatacac 110
              ||||||||||||||||||||
Sbjct: 133471 acatgaacatgggcatacac 133452
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>gb|AC133464.11| Mus musculus chromosome 16, clone RP24-459O21, complete sequence
          Length = 142742

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   atattatgtgcatgtgcata 35
            ||||||||||||||||||||
Sbjct: 3330 atattatgtgcatgtgcata 3311
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>gb|AC140799.6| Mus musculus chromosome 15, clone RP24-147N23, complete sequence
          Length = 162329

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     tgtgcatgtgcatatacata 41
              ||||||||||||||||||||
Sbjct: 160584 tgtgcatgtgcatatacata 160565
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>gb|AC145800.2| Xenopus tropicalis clone CH216-60E16, complete sequence
          Length = 159689

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     atgtgcatgtgcatatacat 40
              ||||||||||||||||||||
Sbjct: 108587 atgtgcatgtgcatatacat 108568
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>gb|AC122913.4| Mus musculus BAC clone RP23-25J21 from 3, complete sequence
          Length = 205216

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 91     acatgaacatgggcatacacacattttt 118
              |||||||||||  |||||||||||||||
Sbjct: 184580 acatgaacatgcacatacacacattttt 184553
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>ref|XM_669305.1| Plasmodium berghei strain ANKA hypothetical protein
          (PB103469.00.0) partial mRNA
          Length = 111

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 10 tgtataatattatgtgcatg 29
          ||||||||||||||||||||
Sbjct: 10 tgtataatattatgtgcatg 29
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>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5
          Length = 341050

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   tgggcatacacacattttta 119
             ||||||||||||||||||||
Sbjct: 27477 tgggcatacacacattttta 27496
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>ref|NM_001002110.1| Danio rerio zgc:86839 (zgc:86839), mRNA
          Length = 1054

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 58  acatacgagcatgctttctc 77
           ||||||||||||||||||||
Sbjct: 722 acatacgagcatgctttctc 703
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>gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105K11, complete sequence
          Length = 222520

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 91     acatgaacatgggcatacacacat 114
              ||||||||||||||||||| ||||
Sbjct: 217582 acatgaacatgggcatacatacat 217605
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>emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 in linkage group 12,
              complete sequence
          Length = 155592

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 89     gtacatgaacatgggcatacacac 112
              |||||||||||||| |||||||||
Sbjct: 152158 gtacatgaacatggacatacacac 152135
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>gb|BC071486.1| Danio rerio zgc:86839, mRNA (cDNA clone MGC:86839 IMAGE:6902520),
           complete cds
          Length = 1054

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 58  acatacgagcatgctttctc 77
           ||||||||||||||||||||
Sbjct: 722 acatacgagcatgctttctc 703
to top
>emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in linkage group 16,
             complete sequence
          Length = 92059

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    gtgcatgtgcatatacatag 42
             ||||||||||||||||||||
Sbjct: 88573 gtgcatgtgcatatacatag 88554
to top
>gb|AC091827.2| Homo sapiens chromosome 5 clone CTD-2006A19, complete sequence
          Length = 164820

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 97    acatgggcatacacacatttttag 120
             ||||||||||||||||| ||||||
Sbjct: 61720 acatgggcatacacacaattttag 61697
to top
>gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome 16, complete sequence
          Length = 244730

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     atgtgcatgtgcatatacat 40
              ||||||||||||||||||||
Sbjct: 227943 atgtgcatgtgcatatacat 227962
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 98       catgggcatacacacatttttagg 121
                |||||||||| |||||||||||||
Sbjct: 28187903 catgggcatagacacatttttagg 28187926
to top
>gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosome 10, complete
             sequence
          Length = 182748

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 91    acatgaacatgggcatacacacat 114
             ||||||||||||||||||| ||||
Sbjct: 82489 acatgaacatgggcatacatacat 82512
to top
>gb|AC124982.13| Mus musculus chromosome 3, clone RP24-173F6, complete sequence
          Length = 180185

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     tattatgtgcatgtgcatat 36
              ||||||||||||||||||||
Sbjct: 147408 tattatgtgcatgtgcatat 147427
to top
>emb|BX005292.13| Mouse DNA sequence from clone RP24-407G18 on chromosome 4, complete
            sequence
          Length = 168795

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   tgtgcatgtgcatatacata 41
            ||||||||||||||||||||
Sbjct: 8750 tgtgcatgtgcatatacata 8731
to top
>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1717_A09
          Length = 203132

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 98     catgggcatacacacatttttagg 121
              |||||||||| |||||||||||||
Sbjct: 177550 catgggcatagacacatttttagg 177573
to top
>emb|CT573031.6| Mouse DNA sequence from clone RP24-244H14 on chromosome 16, complete
             sequence
          Length = 170444

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    atattatgtgcatgtgcata 35
             ||||||||||||||||||||
Sbjct: 16112 atattatgtgcatgtgcata 16131
to top
>dbj|AP002004.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-693N9, complete
             sequence
          Length = 172081

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    gtataatattatgtgcatgt 30
             ||||||||||||||||||||
Sbjct: 79371 gtataatattatgtgcatgt 79352
to top
>gb|AC133943.3| Mus musculus BAC clone RP24-104D12 from 3, complete sequence
          Length = 218218

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     tgtgcatgtgcatatacata 41
              ||||||||||||||||||||
Sbjct: 114789 tgtgcatgtgcatatacata 114770
to top
>emb|AL603792.12| Mouse DNA sequence from clone RP23-328B4 on chromosome 11, complete
              sequence
          Length = 203030

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     tatgtgcatgtgcatataca 39
              ||||||||||||||||||||
Sbjct: 166207 tatgtgcatgtgcatataca 166188
to top
>emb|AL772312.6| Mouse DNA sequence from clone RP23-91D16 on chromosome 4, complete
             sequence
          Length = 183630

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    tgtgcatgtgcatatacata 41
             ||||||||||||||||||||
Sbjct: 55361 tgtgcatgtgcatatacata 55380
to top
>emb|AL731789.9| Mouse DNA sequence from clone RP23-52F6 on chromosome X, complete
            sequence
          Length = 218939

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 20   tatgtgcatgtgcatataca 39
            ||||||||||||||||||||
Sbjct: 6268 tatgtgcatgtgcatataca 6249
to top
>gb|AC165075.3| Mus musculus BAC clone RP24-465N15 from chromosome 17, complete sequence
          Length = 180635

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 22     tgtgcatgtgcatatacat 40
              |||||||||||||||||||
Sbjct: 119973 tgtgcatgtgcatatacat 119991
to top
>gb|AC150542.2| Bos taurus  BAC CH240-382E8 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 191058

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 20    tatgtgcatgtgcatatacatag 42
             ||||||||||| |||||||||||
Sbjct: 27892 tatgtgcatgtccatatacatag 27870
to top
>gb|AC144860.2| Mus musculus BAC clone RP24-133K9 from chromosome 17, complete sequence
          Length = 170928

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 22     tgtgcatgtgcatatacat 40
              |||||||||||||||||||
Sbjct: 136651 tgtgcatgtgcatatacat 136633
to top
>gb|AC127224.3| Mus musculus BAC clone RP24-498F21 from chromosome 10, complete
             sequence
          Length = 162143

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    taatattatgtgcatgtgc 32
             |||||||||||||||||||
Sbjct: 76865 taatattatgtgcatgtgc 76883
to top
>gb|AC163492.3| Mus musculus chromosome 18, clone RP23-411L20, complete sequence
          Length = 201822

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    ttatgtgcatgtgcatata 37
             |||||||||||||||||||
Sbjct: 65819 ttatgtgcatgtgcatata 65837
to top
>gb|AC090443.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-434H17, complete
             sequence
          Length = 161421

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    atgtgcatgtgcatataca 39
             |||||||||||||||||||
Sbjct: 96818 atgtgcatgtgcatataca 96836
to top
>gb|AC164156.2| Mus musculus BAC clone RP24-549I8 from chromosome 1, complete sequence
          Length = 173764

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    tgtgcatgtgcatatacat 40
             |||||||||||||||||||
Sbjct: 53798 tgtgcatgtgcatatacat 53780
to top
>gb|AC132358.3| Mus musculus BAC clone RP24-133O24 from chromosome 18, complete
             sequence
          Length = 182085

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 53    cattcacatacgagcatgc 71
             |||||||||||||||||||
Sbjct: 92524 cattcacatacgagcatgc 92506
to top
>gb|AC120548.15| Mus musculus chromosome 17, clone RP23-211H11, complete sequence
          Length = 198829

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 21     atgtgcatgtgcatataca 39
              |||||||||||||||||||
Sbjct: 110159 atgtgcatgtgcatataca 110141
to top
>gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, complete sequence
          Length = 208211

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    tgtgcatgtgcatatacat 40
             |||||||||||||||||||
Sbjct: 44524 tgtgcatgtgcatatacat 44506
to top
>gb|AC123796.2| Mus musculus BAC clone RP24-320P9 from chromosome 8, complete sequence
          Length = 156593

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 20     tatgtgcatgtgcatatacatag 42
              |||||||||||||||||| ||||
Sbjct: 105188 tatgtgcatgtgcatatagatag 105166
to top
>gb|AC121971.3| Mus musculus BAC clone RP24-275H22 from chromosome 7, complete sequence
          Length = 195611

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 21    atgtgcatgtgcatataca 39
             |||||||||||||||||||
Sbjct: 54741 atgtgcatgtgcatataca 54759
to top
>gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome 1, complete sequence
          Length = 207475

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 97     acatgggcatacacacatt 115
              |||||||||||||||||||
Sbjct: 100255 acatgggcatacacacatt 100273
to top
>gb|AC117218.3| Mus musculus BAC clone RP23-344B4 from 15, complete sequence
          Length = 179858

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 19     ttatgtgcatgtgcatatacata 41
              ||||||| |||||||||||||||
Sbjct: 109145 ttatgtgtatgtgcatatacata 109123
to top
>gb|AC116731.9| Mus musculus chromosome 8, clone RP23-346D17, complete sequence
          Length = 230139

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 20     tatgtgcatgtgcatatacatag 42
              |||||||||||||||||| ||||
Sbjct: 211826 tatgtgcatgtgcatatagatag 211804
to top
>gb|AC160965.4| Mus musculus BAC clone RP24-334E4 from chromosome 1, complete sequence
          Length = 182270

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    tgtgcatgtgcatatacat 40
             |||||||||||||||||||
Sbjct: 13026 tgtgcatgtgcatatacat 13044
to top
>emb|AL139811.30| Human DNA sequence from clone RP11-75A9 on chromosome Xp11.23-11.4
             Contains a catenin, beta like 1 (NAP, P14L, C20orf33,
             FLJ21108, NYD-SP19) (CTNNBL1) pseudogene, a
             glyceraldehyde-3-phosphate dehydrogenase (G3PD, GAPDH)
             (GAPD) pseudogene, a transmembrane protein vezatin
             pseudogene, a novel gene (FLJ20344) and two CpG islands,
             complete sequence
          Length = 141469

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    tgtgcatgtgcatatacat 40
             |||||||||||||||||||
Sbjct: 98575 tgtgcatgtgcatatacat 98557
to top
>emb|AL135902.16| Human DNA sequence from clone RP11-204P2 on chromosome 6 Contains the
             IL20RA gene for interleukin 20 receptor alpha, a novel
             gene, the 5' part of a novel gene and a CpG island,
             complete sequence
          Length = 152228

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    tgtgcatgtgcatatacat 40
             |||||||||||||||||||
Sbjct: 83495 tgtgcatgtgcatatacat 83513
to top
>emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BAC clone F11C1
          Length = 111122

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 12    tataatattatgtgcatgtgcatatac 38
             |||||||| ||||||||||| ||||||
Sbjct: 88786 tataatatgatgtgcatgtgaatatac 88812
to top
>gb|AC022018.10| Homo sapiens chromosome 10 clone RP11-214N15, complete sequence
          Length = 159617

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    atattatgtgcatgtgcat 34
             |||||||||||||||||||
Sbjct: 63261 atattatgtgcatgtgcat 63279
to top
>emb|AL645808.13| Mouse DNA sequence from clone RP23-427P14 on chromosome 13 Contains the
              gene for a novel protein similar to myosin, light
              polypeptide kinase 2 Mylk2, a novel gene, the Wrnip gene
              for Werner syndrome homolog (human) interacting protein,
              the Serpinb1a gene for serine (or cysteine) proteinase
              inhibitor clade B (ovalbumin) member 1a, a Serpinb1
              pseudogene and a CpG island, complete sequence
          Length = 190673

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     tatgtgcatgtgcatatac 38
              |||||||||||||||||||
Sbjct: 130685 tatgtgcatgtgcatatac 130703
to top
>gb|AC124864.3| Homo sapiens BAC clone RP11-570J4 from 4, complete sequence
          Length = 166797

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 91    acatgaacatgggcatacacaca 113
             ||||||||| |||||||||||||
Sbjct: 65149 acatgaacacgggcatacacaca 65171
to top
>gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, complete sequence
          Length = 139476

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 93    atgaacatgggcatacaca 111
             |||||||||||||||||||
Sbjct: 31202 atgaacatgggcatacaca 31220
to top
>gb|AC015743.9| Homo sapiens chromosome 8, clone RP11-1G11, complete sequence
          Length = 193989

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 91     acatgaacatgggcatacacaca 113
              ||||| |||||||||||||||||
Sbjct: 161840 acatgcacatgggcatacacaca 161862
to top
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      agattgtataatattatgt 24
              |||||||||||||||||||
Sbjct: 597446 agattgtataatattatgt 597464
to top
>gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, complete sequence
          Length = 87338

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 19    ttatgtgcatgtgcatatacata 41
             ||||||| |||||||||||||||
Sbjct: 23915 ttatgtgtatgtgcatatacata 23937
to top
>gb|AC008525.7|AC008525 Homo sapiens chromosome 5 clone CTC-467M3, complete sequence
          Length = 123238

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 19    ttatgtgcatgtgcatatacata 41
             ||||||| |||||||||||||||
Sbjct: 31472 ttatgtgtatgtgcatatacata 31450
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     atgtgcatgtgcatataca 39
              |||||||||||||||||||
Sbjct: 130433 atgtgcatgtgcatataca 130451
to top
>gb|AC074270.25|AC074270 Homo sapiens 12 BAC RP11-84G21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 140597

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    tgtgcatgtgcatatacat 40
             |||||||||||||||||||
Sbjct: 89321 tgtgcatgtgcatatacat 89339
to top
>gb|AC158237.2| Mus musculus BAC clone RP23-142I8 from chromosome 9, complete sequence
          Length = 179606

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 91    acatgaacatgggcatacacaca 113
             ||||||||||||||| |||||||
Sbjct: 82839 acatgaacatgggcacacacaca 82817
to top
>gb|AC011241.7| Homo sapiens BAC clone RP11-467P13 from 2, complete sequence
          Length = 104891

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    tgtgcatgtgcatatacat 40
             |||||||||||||||||||
Sbjct: 92257 tgtgcatgtgcatatacat 92239
to top
>gb|AC116534.7| Homo sapiens chromosome 11, clone RP11-265F24, complete sequence
          Length = 186744

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    ttatgtgcatgtgcatata 37
             |||||||||||||||||||
Sbjct: 37559 ttatgtgcatgtgcatata 37541
to top
>gb|AC154302.1| Mus musculus BAC clone RP23-378K2 from chromosome 9, complete sequence
          Length = 167400

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    tgtataatattatgtgcat 28
             |||||||||||||||||||
Sbjct: 60050 tgtataatattatgtgcat 60032
to top
>dbj|AP007208.1| Mus musculus molossinus genomic DNA, chromosome 1 clone:MSMg01-275M02,
             complete sequence
          Length = 165943

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 19    ttatgtgcatgtgcatatacata 41
             |||||||||||||||||| ||||
Sbjct: 69336 ttatgtgcatgtgcatatgcata 69314
to top
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1026C12
          Length = 170240

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     atgtgcatgtgcatataca 39
              |||||||||||||||||||
Sbjct: 129732 atgtgcatgtgcatataca 129750
to top
>emb|AL935129.25| Mouse DNA sequence from clone RP23-181O3 on chromosome 2, complete
              sequence
          Length = 216639

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 23     gtgcatgtgcatatacata 41
              |||||||||||||||||||
Sbjct: 211570 gtgcatgtgcatatacata 211588
to top
>emb|AL929164.12| Mouse DNA sequence from clone RP23-226L18 on chromosome 2, complete
             sequence
          Length = 170293

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    gtgcatgtgcatatacata 41
             |||||||||||||||||||
Sbjct: 97702 gtgcatgtgcatatacata 97720
to top
>gb|AC154022.2| Mus musculus 6 BAC RP24-402L3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 125205

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 18    attatgtgcatgtgcatat 36
             |||||||||||||||||||
Sbjct: 86259 attatgtgcatgtgcatat 86241
to top
>gb|AC109499.21| Mus musculus chromosome 18, clone RP23-349E12, complete sequence
          Length = 190594

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    ttatgtgcatgtgcatata 37
             |||||||||||||||||||
Sbjct: 29447 ttatgtgcatgtgcatata 29429
to top
>gb|AC079444.28| Mus musculus strain C57BL/6J chromosome 10 clone rp23-395k5, complete
              sequence
          Length = 171451

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 14     taatattatgtgcatgtgcatat 36
              |||| ||||||||||||||||||
Sbjct: 115964 taattttatgtgcatgtgcatat 115986
to top
>gb|AC079681.38| Mus musculus strain C57BL/6J chromosome 10 clone rp23-310n21, complete
             sequence
          Length = 216807

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 14    taatattatgtgcatgtgcatat 36
             |||| ||||||||||||||||||
Sbjct: 61409 taattttatgtgcatgtgcatat 61431
to top
>gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, complete sequence
          Length = 204424

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 20   tatgtgcatgtgcatatacatag 42
            |||||||||||||||||| ||||
Sbjct: 7949 tatgtgcatgtgcatatagatag 7927
to top
>gb|AC162937.6| Mus musculus BAC clone RP23-120I8 from chromosome 9, complete sequence
          Length = 207210

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 22     tgtgcatgtgcatatacat 40
              |||||||||||||||||||
Sbjct: 172748 tgtgcatgtgcatatacat 172766
to top
>gb|AC112267.4| Mus musculus BAC clone RP24-84L8 from 9, complete sequence
          Length = 188376

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 22     tgtgcatgtgcatatacat 40
              |||||||||||||||||||
Sbjct: 175886 tgtgcatgtgcatatacat 175904
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>gb|AC128704.4| Mus musculus BAC clone RP23-436H14 from 3, complete sequence
          Length = 212119

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 91     acatgaacatgggcatacacaca 113
              ||||| |||||||||||||||||
Sbjct: 126753 acatgcacatgggcatacacaca 126731
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>emb|CT025622.9| Mouse DNA sequence from clone RP23-443N15 on chromosome 17, complete
              sequence
          Length = 161938

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     atgtgcatgtgcatataca 39
              |||||||||||||||||||
Sbjct: 123439 atgtgcatgtgcatataca 123457
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>gb|AC015564.13| Homo sapiens chromosome 8, clone RP11-351D9, complete sequence
          Length = 193425

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 91    acatgaacatgggcatacacaca 113
             ||||| |||||||||||||||||
Sbjct: 46983 acatgcacatgggcatacacaca 47005
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>gb|AC171201.1| Mus musculus BAC clone RP24-303H7 from chromosome 9, complete sequence
          Length = 170322

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    tgtgcatgtgcatatacat 40
             |||||||||||||||||||
Sbjct: 81529 tgtgcatgtgcatatacat 81547
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>emb|AJ488903.1|HCF488903 Heterostegina cf. operculinoides partial 28S rRNA gene, isolate 377
          Length = 492

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 24  tgcatgtgcatatacatag 42
           |||||||||||||||||||
Sbjct: 423 tgcatgtgcatatacatag 405
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>emb|AJ488902.1|HDE488902 Heterostegina depressa partial 28S rRNA gene, isolate 282
          Length = 495

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 24  tgcatgtgcatatacatag 42
           |||||||||||||||||||
Sbjct: 426 tgcatgtgcatatacatag 408
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>emb|AJ488901.1|HDE488901 Heterostegina depressa partial 28S rRNA gene, isolate 308
          Length = 486

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 24  tgcatgtgcatatacatag 42
           |||||||||||||||||||
Sbjct: 417 tgcatgtgcatatacatag 399
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>emb|AJ488900.1|HDE488900 Heterostegina depressa partial 28S rRNA gene, isolate 642
          Length = 486

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 24  tgcatgtgcatatacatag 42
           |||||||||||||||||||
Sbjct: 417 tgcatgtgcatatacatag 399
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>emb|AL683810.10| Mouse DNA sequence from clone RP23-10L18 on chromosome 2, complete
             sequence
          Length = 186882

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 95    gaacatgggcatacacaca 113
             |||||||||||||||||||
Sbjct: 79545 gaacatgggcatacacaca 79527
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>gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, complete sequence
          Length = 239743

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 97     acatgggcatacacacatt 115
              |||||||||||||||||||
Sbjct: 223699 acatgggcatacacacatt 223717
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>emb|AL808103.8| Mouse DNA sequence from clone RP23-301G2 on chromosome 4, complete
              sequence
          Length = 232070

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 22     tgtgcatgtgcatatacat 40
              |||||||||||||||||||
Sbjct: 141634 tgtgcatgtgcatatacat 141652
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>emb|AL450399.16| Mouse DNA sequence from clone RP23-286I5 on chromosome X, complete
              sequence
          Length = 207922

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 19     ttatgtgcatgtgcatata 37
              |||||||||||||||||||
Sbjct: 191067 ttatgtgcatgtgcatata 191049
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>emb|AL732428.7| Mouse DNA sequence from clone RP23-347P2 on chromosome 2, complete
             sequence
          Length = 123627

 Score = 38.2 bits (19), Expect = 5.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 95    gaacatgggcatacacaca 113
             |||||||||||||||||||
Sbjct: 27749 gaacatgggcatacacaca 27767


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,369,789
Number of Sequences: 3902068
Number of extensions: 1369789
Number of successful extensions: 108314
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107975
Number of HSP's gapped (non-prelim): 336
length of query: 126
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 105
effective length of database: 17,151,101,840
effective search space: 1800865693200
effective search space used: 1800865693200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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