| Clone Name | rbaal38i04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ZO3_CANFA (O62683) Tight junction protein ZO-3 (Zonula occludens... | 28 | 5.1 | 2 | WSC3_YEAST (Q12215) Cell wall integrity and stress response comp... | 28 | 6.7 |
|---|
>ZO3_CANFA (O62683) Tight junction protein ZO-3 (Zonula occludens 3 protein)| (Zona occludens 3 protein) (Tight junction protein 3) Length = 898 Score = 28.5 bits (62), Expect = 5.1 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +2 Query: 83 LDGGRDGASGDGVLGDLVPFVVARGR 160 + GGRD ASG V+ D+VP A GR Sbjct: 26 ISGGRDRASGSVVVSDVVPGGPADGR 51
>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3| precursor Length = 556 Score = 28.1 bits (61), Expect = 6.7 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = -3 Query: 187 RHRKXAAMISAASDNKGNKIAQDAITGGAIATAV 86 R + A +AAS+N+ N ++ ++GGAIA V Sbjct: 353 RSSEVATATAAASNNRSNSTSKQRLSGGAIAGIV 386 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,456,432 Number of Sequences: 219361 Number of extensions: 238864 Number of successful extensions: 857 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 846 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 857 length of database: 80,573,946 effective HSP length: 38 effective length of database: 72,238,228 effective search space used: 1733717472 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)