ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal38i01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | EGFR_MOUSE (Q01279) Epidermal growth factor receptor precursor (... | 28 | 5.1 | 2 | ERBB_AVIER (P00535) Tyrosine-protein kinase transforming protein... | 28 | 5.1 | 3 | ERBB_ALV (P00534) Tyrosine-protein kinase transforming protein e... | 28 | 5.1 |
|---|
>EGFR_MOUSE (Q01279) Epidermal growth factor receptor precursor (EC 2.7.10.1)| Length = 1210 Score = 28.5 bits (62), Expect = 5.1 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 5/30 (16%) Frame = +3 Query: 21 HFRVLRDTHXD-----GTGSLGTSYKVLWI 95 H R+L++T G+G+ GT YK LWI Sbjct: 705 HLRILKETEFKKIKVLGSGAFGTVYKGLWI 734
>ERBB_AVIER (P00535) Tyrosine-protein kinase transforming protein erbB (EC| 2.7.10.1) Length = 604 Score = 28.5 bits (62), Expect = 5.1 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 5/30 (16%) Frame = +3 Query: 21 HFRVLRDTHXD-----GTGSLGTSYKVLWI 95 H R+L++T G+G+ GT YK LWI Sbjct: 123 HLRILKETEFKKVKVLGSGAFGTIYKGLWI 152
>ERBB_ALV (P00534) Tyrosine-protein kinase transforming protein erbB (EC| 2.7.10.1) Length = 634 Score = 28.5 bits (62), Expect = 5.1 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 5/30 (16%) Frame = +3 Query: 21 HFRVLRDTHXD-----GTGSLGTSYKVLWI 95 H R+L++T G+G+ GT YK LWI Sbjct: 123 HLRILKETEFKKVKVLGSGAFGTVYKGLWI 152 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,016,538 Number of Sequences: 219361 Number of extensions: 408411 Number of successful extensions: 702 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 696 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 702 length of database: 80,573,946 effective HSP length: 41 effective length of database: 71,580,145 effective search space used: 1717923480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
