ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal38f19 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ005840.1|TAE5840 Triticum aestivum mRNA for thioredoxin M Length = 781 Score = 716 bits (361), Expect = 0.0 Identities = 449/478 (93%), Gaps = 4/478 (0%) Strand = Plus / Minus Query: 1 caactggtcggtggatcgtatacgtacatcatatagatacatatatattgtctgaggaac 60 |||||||||||||||||||||||| ||||||||| |||||||||| ||||| |||| Sbjct: 684 caactggtcggtggatcgtatacgcgcatcatatacatacatatatgctgtctcgcgaac 625 Query: 61 agaacagaaagggtgtgtgcgtcctcgattaatcgctaattaaga----tcaattagctg 116 ||||||| || |||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 624 agaacagtaaaggtgtgtgcgtcctcgattaatcgctaattaagaatgattaattagctg 565 Query: 117 ccgatgtacttgtcgatgatggtgcagagggtggtcttcgggacggcgccgatgacgctc 176 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 564 ccgatgtacttgtcgattatggtgcagagggttgtcttcgggacggcgccgatgacgctc 505 Query: 177 tccttcttctcgccgtccttgaacatgaggacggtggggatgctccggatgccgtaggtt 236 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 504 tccttcttctcgccgtccttgaacatgagcacggtggggatgctccggatgccgtaggtg 445 Query: 237 gatgcgatatttgggcagtcgtccgtgttcaccttgcagcactttatcttccccatgtag 296 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 444 gatgcgatgtttgggcagtcgtccgtgttcaccttgcagcacttgatcttccccacgtag 385 Query: 297 tcctttgccagttcgtctatcaccggcgcaatcatacggcacgggccgcaccacggcgcc 356 ||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 384 tcctttgccagttcgtcgatcaccggggcaatcatccggcacggcccgcaccacggcgcc 325 Query: 357 cagaactccaccagcaccggcgactcgcacgcgatcaccatgttgtcccaattcttctcg 416 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 324 cagaactccaccagcaccggcgactcgcacgcgatcaccatgttatcccaattcttctcg 265 Query: 417 tccgccacaatcacttcgtcgacgacgttcttgcacttgcaaacgaagcgagacggcc 474 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 264 tcagccacaatcacttcgtcgacgacgttcttgcacttgcagacgaagcgagacggcc 207
>emb|AJ870964.1| Triticum turgidum subsp. durum mRNA for thioredoxin M precursor (trxm gene) Length = 752 Score = 716 bits (361), Expect = 0.0 Identities = 449/478 (93%), Gaps = 4/478 (0%) Strand = Plus / Minus Query: 1 caactggtcggtggatcgtatacgtacatcatatagatacatatatattgtctgaggaac 60 |||||||||||||||||||||||| ||||||||| |||||||||| ||||| |||| Sbjct: 671 caactggtcggtggatcgtatacgcgcatcatatacatacatatatgctgtctcgcgaac 612 Query: 61 agaacagaaagggtgtgtgcgtcctcgattaatcgctaattaaga----tcaattagctg 116 ||||||| || |||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 611 agaacagtaaaggtgtgtgcgtcctcgattaatcgctaattaagaatgattaattagctg 552 Query: 117 ccgatgtacttgtcgatgatggtgcagagggtggtcttcgggacggcgccgatgacgctc 176 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 551 ccgatgtacttgtcgattatggtgcagagggttgtcttcgggacggcgccgatgacgctc 492 Query: 177 tccttcttctcgccgtccttgaacatgaggacggtggggatgctccggatgccgtaggtt 236 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 491 tccttcttctcgccgtccttgaacatgagcacggtggggatgctccggatgccgtaggtg 432 Query: 237 gatgcgatatttgggcagtcgtccgtgttcaccttgcagcactttatcttccccatgtag 296 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 431 gatgcgatgtttgggcagtcgtccgtgttcaccttgcagcacttgatcttccccacgtag 372 Query: 297 tcctttgccagttcgtctatcaccggcgcaatcatacggcacgggccgcaccacggcgcc 356 ||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 371 tcctttgccagttcgtcgatcaccggggcaatcatccggcacggcccgcaccacggcgcc 312 Query: 357 cagaactccaccagcaccggcgactcgcacgcgatcaccatgttgtcccaattcttctcg 416 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 311 cagaactccaccagcaccggcgactcgcacgcgatcaccatgttatcccaattcttctcg 252 Query: 417 tccgccacaatcacttcgtcgacgacgttcttgcacttgcaaacgaagcgagacggcc 474 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 251 tcagccacaatcacttcgtcgacgacgttcttgcacttgcagacgaagcgagacggcc 194
>emb|AJ005841.1|OSA5841 Oryza sativa mRNA for thioredoxin M Length = 819 Score = 389 bits (196), Expect = e-105 Identities = 319/360 (88%) Strand = Plus / Minus Query: 107 caattagctgccgatgtacttgtcgatgatggtgcagagggtggtcttcgggacggcgcc 166 |||| |||||| || ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 535 caatcagctgctgacgtacttgtcgatgatggtggcgagggtggtcttggggacggcgcc 476 Query: 167 gatgacgctctccttcttctcgccgtccttgaacatgaggacggtggggatgctccggat 226 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 475 gatgacgctctccttcttctcgccgttcttgaacatgaggacggtggggatgctccggat 416 Query: 227 gccgtaggttgatgcgatatttgggcagtcgtccgtgttcaccttgcagcactttatctt 286 ||||||| | | ||||| ||||| |||||||||||||||||||||||||||| ||||| Sbjct: 415 gccgtagttggtggcgatgtttggtgagtcgtccgtgttcaccttgcagcacttgatctt 356 Query: 287 ccccatgtagtcctttgccagttcgtctatcaccggcgcaatcatacggcacgggccgca 346 || | ||| ||||| ||||| ||||| ||||||||||| ||||| | |||||| ||||| Sbjct: 355 gccgacgtactccttggccagctcgtcgatcaccggcgcgatcatcctgcacggtccgca 296 Query: 347 ccacggcgcccagaactccaccagcaccggcgactcgcacgcgatcaccatgttgtccca 406 |||||| ||||||||||||||||||||||||| ||||| | | | ||||||| ||||||| Sbjct: 295 ccacggtgcccagaactccaccagcaccggcgcctcgctccccagcaccatgctgtccca 236 Query: 407 attcttctcgtccgccacaatcacttcgtcgacgacgttcttgcacttgcaaacgaagcg 466 ||||||||||||||||| | |||||||||||||||||| |||||| ||| ||||||| Sbjct: 235 gttcttctcgtccgccaccaccacttcgtcgacgacgttgctgcactggcaggcgaagcg 176
>dbj|AK061678.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H09, full insert sequence Length = 945 Score = 389 bits (196), Expect = e-105 Identities = 319/360 (88%) Strand = Plus / Minus Query: 107 caattagctgccgatgtacttgtcgatgatggtgcagagggtggtcttcgggacggcgcc 166 |||| |||||| || ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 599 caatcagctgctgacgtacttgtcgatgatggtggcgagggtggtcttggggacggcgcc 540 Query: 167 gatgacgctctccttcttctcgccgtccttgaacatgaggacggtggggatgctccggat 226 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 539 gatgacgctctccttcttctcgccgttcttgaacatgaggacggtggggatgctccggat 480 Query: 227 gccgtaggttgatgcgatatttgggcagtcgtccgtgttcaccttgcagcactttatctt 286 ||||||| | | ||||| ||||| |||||||||||||||||||||||||||| ||||| Sbjct: 479 gccgtagttggtggcgatgtttggtgagtcgtccgtgttcaccttgcagcacttgatctt 420 Query: 287 ccccatgtagtcctttgccagttcgtctatcaccggcgcaatcatacggcacgggccgca 346 || | ||| ||||| ||||| ||||| ||||||||||| ||||| | |||||| ||||| Sbjct: 419 gccgacgtactccttggccagctcgtcgatcaccggcgcgatcatcctgcacggtccgca 360 Query: 347 ccacggcgcccagaactccaccagcaccggcgactcgcacgcgatcaccatgttgtccca 406 |||||| ||||||||||||||||||||||||| ||||| | | | ||||||| ||||||| Sbjct: 359 ccacggtgcccagaactccaccagcaccggcgcctcgctccccagcaccatgctgtccca 300 Query: 407 attcttctcgtccgccacaatcacttcgtcgacgacgttcttgcacttgcaaacgaagcg 466 ||||||||||||||||| | |||||||||||||||||| |||||| ||| ||||||| Sbjct: 299 gttcttctcgtccgccactaccacttcgtcgacgacgttgctgcactggcaggcgaagcg 240
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 361 bits (182), Expect = 1e-96 Identities = 284/318 (89%) Strand = Plus / Plus Query: 107 caattagctgccgatgtacttgtcgatgatggtgcagagggtggtcttcgggacggcgcc 166 |||| |||||| || ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 4461068 caatcagctgctgacgtacttgtcgatgatggtggcgagggtggtcttggggacggcgcc 4461127 Query: 167 gatgacgctctccttcttctcgccgtccttgaacatgaggacggtggggatgctccggat 226 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4461128 gatgacgctctccttcttctcgccgttcttgaacatgaggacggtggggatgctccggat 4461187 Query: 227 gccgtaggttgatgcgatatttgggcagtcgtccgtgttcaccttgcagcactttatctt 286 ||||||| | | ||||| ||||| |||||||||||||||||||||||||||| ||||| Sbjct: 4461188 gccgtagttggtggcgatgtttggtgagtcgtccgtgttcaccttgcagcacttgatctt 4461247 Query: 287 ccccatgtagtcctttgccagttcgtctatcaccggcgcaatcatacggcacgggccgca 346 || | ||| ||||| ||||| ||||| ||||||||||| ||||| | |||||| ||||| Sbjct: 4461248 gccgacgtactccttggccagctcgtcgatcaccggcgcgatcatcctgcacggtccgca 4461307 Query: 347 ccacggcgcccagaactccaccagcaccggcgactcgcacgcgatcaccatgttgtccca 406 |||||| ||||||||||||||||||||||||| ||||| | | | ||||||| ||||||| Sbjct: 4461308 ccacggtgcccagaactccaccagcaccggcgcctcgctccccagcaccatgctgtccca 4461367 Query: 407 attcttctcgtccgccac 424 ||||||||||||||||| Sbjct: 4461368 gttcttctcgtccgccac 4461385
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 361 bits (182), Expect = 1e-96 Identities = 284/318 (89%) Strand = Plus / Plus Query: 107 caattagctgccgatgtacttgtcgatgatggtgcagagggtggtcttcgggacggcgcc 166 |||| |||||| || ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 4461049 caatcagctgctgacgtacttgtcgatgatggtggcgagggtggtcttggggacggcgcc 4461108 Query: 167 gatgacgctctccttcttctcgccgtccttgaacatgaggacggtggggatgctccggat 226 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4461109 gatgacgctctccttcttctcgccgttcttgaacatgaggacggtggggatgctccggat 4461168 Query: 227 gccgtaggttgatgcgatatttgggcagtcgtccgtgttcaccttgcagcactttatctt 286 ||||||| | | ||||| ||||| |||||||||||||||||||||||||||| ||||| Sbjct: 4461169 gccgtagttggtggcgatgtttggtgagtcgtccgtgttcaccttgcagcacttgatctt 4461228 Query: 287 ccccatgtagtcctttgccagttcgtctatcaccggcgcaatcatacggcacgggccgca 346 || | ||| ||||| ||||| ||||| ||||||||||| ||||| | |||||| ||||| Sbjct: 4461229 gccgacgtactccttggccagctcgtcgatcaccggcgcgatcatcctgcacggtccgca 4461288 Query: 347 ccacggcgcccagaactccaccagcaccggcgactcgcacgcgatcaccatgttgtccca 406 |||||| ||||||||||||||||||||||||| ||||| | | | ||||||| ||||||| Sbjct: 4461289 ccacggtgcccagaactccaccagcaccggcgcctcgctccccagcaccatgctgtccca 4461348 Query: 407 attcttctcgtccgccac 424 ||||||||||||||||| Sbjct: 4461349 gttcttctcgtccgccac 4461366
>emb|AL954157.3|CNS08CCV Oryza sativa chromosome 12, . BAC OSJNBa0042N11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168699 Score = 361 bits (182), Expect = 1e-96 Identities = 284/318 (89%) Strand = Plus / Minus Query: 107 caattagctgccgatgtacttgtcgatgatggtgcagagggtggtcttcgggacggcgcc 166 |||| |||||| || ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 43428 caatcagctgctgacgtacttgtcgatgatggtggcgagggtggtcttggggacggcgcc 43369 Query: 167 gatgacgctctccttcttctcgccgtccttgaacatgaggacggtggggatgctccggat 226 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 43368 gatgacgctctccttcttctcgccgttcttgaacatgaggacggtggggatgctccggat 43309 Query: 227 gccgtaggttgatgcgatatttgggcagtcgtccgtgttcaccttgcagcactttatctt 286 ||||||| | | ||||| ||||| |||||||||||||||||||||||||||| ||||| Sbjct: 43308 gccgtagttggtggcgatgtttggtgagtcgtccgtgttcaccttgcagcacttgatctt 43249 Query: 287 ccccatgtagtcctttgccagttcgtctatcaccggcgcaatcatacggcacgggccgca 346 || | ||| ||||| ||||| ||||| ||||||||||| ||||| | |||||| ||||| Sbjct: 43248 gccgacgtactccttggccagctcgtcgatcaccggcgcgatcatcctgcacggtccgca 43189 Query: 347 ccacggcgcccagaactccaccagcaccggcgactcgcacgcgatcaccatgttgtccca 406 |||||| ||||||||||||||||||||||||| ||||| | | | ||||||| ||||||| Sbjct: 43188 ccacggtgcccagaactccaccagcaccggcgcctcgctccccagcaccatgctgtccca 43129 Query: 407 attcttctcgtccgccac 424 ||||||||||||||||| Sbjct: 43128 gttcttctcgtccgccac 43111
>gb|L40957.1|MZETHIOM Zea mays thioredoxin M mRNA, complete cds Length = 712 Score = 335 bits (169), Expect = 9e-89 Identities = 292/333 (87%) Strand = Plus / Minus Query: 117 ccgatgtacttgtcgatgatggtgcagagggtggtcttcgggacggcgccgatgacgctc 176 ||||||||||||||||||| |||| ||| |||| ||||||||||||||||||||||||| Sbjct: 532 ccgatgtacttgtcgatgagggtggtgagcgtggacttcgggacggcgccgatgacgctc 473 Query: 177 tccttcttctcgccgtccttgaacatgaggacggtggggatgctccggatgccgtaggtt 236 ||||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 472 tccttcttctcgccgcccttgaagatgagcacggtggggatgctgcggatgccgtaggta 413 Query: 237 gatgcgatatttgggcagtcgtccgtgttcaccttgcagcactttatcttccccatgtag 296 || || | || |||| ||||||||||||||||||||||||| | ||||| || |||| Sbjct: 412 gacgccacgttggggctgtcgtccgtgttcaccttgcagcacgtgatcttgccggcgtag 353 Query: 297 tcctttgccagttcgtctatcaccggcgcaatcatacggcacgggccgcaccacggcgcc 356 ||||| ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 352 tccttggccagctcgtcgatcaccggcgcgatcatccggcacggcccgcaccacggcgcc 293 Query: 357 cagaactccaccagcaccggcgactcgcacgcgatcaccatgttgtcccaattcttctcg 416 |||||||||||||||||||||| ||||||||| ||||||| |||||| ||||||||| Sbjct: 292 cagaactccaccagcaccggcgtctcgcacgccatcaccaacccgtcccagttcttctcg 233 Query: 417 tccgccacaatcacttcgtcgacgacgttcttg 449 |||||||| | |||||||| || |||||||| Sbjct: 232 tccgccaccacaacttcgtccactgcgttcttg 200
>gb|AY106373.1| Zea mays PCO147105 mRNA sequence Length = 783 Score = 327 bits (165), Expect = 2e-86 Identities = 291/333 (87%) Strand = Plus / Minus Query: 117 ccgatgtacttgtcgatgatggtgcagagggtggtcttcgggacggcgccgatgacgctc 176 ||||||||||||||||||| |||| ||| |||| ||| ||||||||||||||||||||| Sbjct: 560 ccgatgtacttgtcgatgagggtggtgagcgtggacttggggacggcgccgatgacgctc 501 Query: 177 tccttcttctcgccgtccttgaacatgaggacggtggggatgctccggatgccgtaggtt 236 ||||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 500 tccttcttctcgccgcccttgaagatgagcacggtggggatgctgcggatgccgtaggtg 441 Query: 237 gatgcgatatttgggcagtcgtccgtgttcaccttgcagcactttatcttccccatgtag 296 || || | || |||| ||||||||||||||||||||||||| | ||||| || |||| Sbjct: 440 gacgccacgttggggctgtcgtccgtgttcaccttgcagcacgtgatcttgccggcgtag 381 Query: 297 tcctttgccagttcgtctatcaccggcgcaatcatacggcacgggccgcaccacggcgcc 356 ||||| ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||| Sbjct: 380 tccttggccagctcgtcgatcaccggcgcgatcatccggcacggcccgcaccacggcgcc 321 Query: 357 cagaactccaccagcaccggcgactcgcacgcgatcaccatgttgtcccaattcttctcg 416 |||||||||||||||||||||| ||||||||| ||||||| |||||| ||||||||| Sbjct: 320 cagaactccaccagcaccggcgtctcgcacgccatcaccaacccgtcccagttcttctcg 261 Query: 417 tccgccacaatcacttcgtcgacgacgttcttg 449 |||||||| | |||||||| || |||||||| Sbjct: 260 tccgccaccacaacttcgtccactgcgttcttg 228
>dbj|AK120500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122B18, full insert sequence Length = 767 Score = 163 bits (82), Expect = 7e-37 Identities = 148/170 (87%) Strand = Plus / Minus Query: 297 tcctttgccagttcgtctatcaccggcgcaatcatacggcacgggccgcaccacggcgcc 356 ||||| ||||| ||||| ||||||||||| ||||| | |||||| ||||||||||| ||| Sbjct: 427 tccttggccagctcgtcgatcaccggcgcgatcatcctgcacggtccgcaccacggtgcc 368 Query: 357 cagaactccaccagcaccggcgactcgcacgcgatcaccatgttgtcccaattcttctcg 416 |||||||||||||||||||||| ||||| | | | ||||||| ||||||| ||||||||| Sbjct: 367 cagaactccaccagcaccggcgcctcgctccccagcaccatgctgtcccagttcttctcg 308 Query: 417 tccgccacaatcacttcgtcgacgacgttcttgcacttgcaaacgaagcg 466 |||||||| | |||||||||||||||||| |||||| ||| ||||||| Sbjct: 307 tccgccaccaccacttcgtcgacgacgttgctgcactggcaggcgaagcg 258 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Minus Query: 107 caattagctgccgatgtacttgtcgatgatggtgcagagggtggtcttcgggacggcgcc 166 |||| |||||| || ||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 539 caatcagctgctgacgtacttgtcgatgatggtggcgagggtggtcttggggacggcgcc 480 Query: 167 gatgacgctctccttcttctcgccgtccttgaacatga 204 |||||||||||||||||||||||||| ||||||||||| Sbjct: 479 gatgacgctctccttcttctcgccgttcttgaacatga 442
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 73.8 bits (37), Expect = 5e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 164123 cggcaggggccgcaccacggcgcccagaagtccaccagcaccggc 164079
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccggcg 378 ||||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 4026914 cggcacggggcgcaccacggcgcccagaagtccaccagcacgggcg 4026869 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 333 cggcacgggccgcaccacggcgccca 358 |||||||||||||||||||||||||| Sbjct: 1842662 cggcacgggccgcaccacggcgccca 1842637
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcac 373 ||||||||||||||||||||||||||||| || |||||||| Sbjct: 2872822 cggcacgggccgcaccacggcgcccagaagtcgaccagcac 2872782
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 |||||||| |||||||||||||||||||| || |||||||||||| Sbjct: 95703 cggcacggtccgcaccacggcgcccagaaatcgaccagcaccggc 95659
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 ||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 524033 cggcacgggccgcaccacggcgcccagaagtcgatcagcaccggc 524077 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 319 ccggcgcaatcatacggcacgggccgcaccacggcgcccagaactccacca 369 ||||||| ||||| |||||||||||||||||| |||||||| ||||||| Sbjct: 225593 ccggcgcgatcatgcggcacgggccgcaccactcggcccagaaatccacca 225643
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 |||||||||||||||||||||||||||| || |||||||||||| Sbjct: 494912 cggcacgggccgcaccacggcgcccagacatcgaccagcaccggc 494868 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 ||||| || |||||||| ||||||||||| || | |||||||||| Sbjct: 335446 cggcagggaccgcaccagggcgcccagaagtcgatcagcaccggc 335490
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccgg 376 ||||| || |||||||||||||||||||| |||||||||||||| Sbjct: 3563287 cggcagggcccgcaccacggcgcccagaagtccaccagcaccgg 3563244
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 335 gcacgggccgcaccacggcgcccagaactccaccagcac 373 ||||||||||||||||||||||||||| || |||||||| Sbjct: 384739 gcacgggccgcaccacggcgcccagaagtcgaccagcac 384777 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 335 gcacgggccgcaccacggcgcccagaa 361 ||||||||||||||||| ||||||||| Sbjct: 2602902 gcacgggccgcaccacgacgcccagaa 2602876
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 335 gcacgggccgcaccacggcgcccagaactccaccagcac 373 ||||||||||||||||||||||||||| || |||||||| Sbjct: 1115434 gcacgggccgcaccacggcgcccagaagtcgaccagcac 1115472 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 335 gcacgggccgcaccacggcgcccagaa 361 ||||||||||||||||| ||||||||| Sbjct: 3815108 gcacgggccgcaccacgacgcccagaa 3815082
>gb|AE009300.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 70 of 187 of the complete sequence Length = 10370 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 335 gcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 ||||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 9451 gcacgggccgcaccagggcgcccagaaatccaccagaaccggc 9493
>gb|AE008313.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 117 of 187 of the complete sequence Length = 8525 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 335 gcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 ||||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 6782 gcacgggccgcaccagggcgcccagaaatccaccagaaccggc 6740
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 335 gcacgggccgcaccacggcgcccagaactccaccagcac 373 ||||||||||||||||||||||||||| || |||||||| Sbjct: 996393 gcacgggccgcaccacggcgcccagaagtcgaccagcac 996431 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 335 gcacgggccgcaccacggcgcccagaa 361 ||||||||||||||||| ||||||||| Sbjct: 3555473 gcacgggccgcaccacgacgcccagaa 3555447
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 339 gggccgcaccacggcgcccagaactccaccagcaccggc 377 ||||||||||||||||||||||| || |||||||||||| Sbjct: 3513837 gggccgcaccacggcgcccagaaatcgaccagcaccggc 3513875 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 tcacttcgtcgacgacgttc 446 |||||||||||||||||||| Sbjct: 1234931 tcacttcgtcgacgacgttc 1234912
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 ||||| ||||||||||||| |||||||| ||||||||||||||| Sbjct: 189439 cggcaggggccgcaccacgtggcccagaagtccaccagcaccggc 189395
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 |||||||| ||||||||||||||||||| || |||||||||||| Sbjct: 58485 cggcacggcccgcaccacggcgcccagacatcgaccagcaccggc 58529
>gb|AE012217.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 125 of 460 of the complete genome Length = 11498 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 334 ggcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 ||||||| ||||||||||| |||||||| |||||||||| |||| Sbjct: 3077 ggcacggcccgcaccacggggcccagaaatccaccagcagcggc 3120
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 334 ggcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 ||||||| ||||||||||| |||||||| |||||||||| |||| Sbjct: 3664745 ggcacggcccgcaccacggggcccagaaatccaccagcagcggc 3664702 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 335 gcacgggccgcaccacggcgcccagaactccaccagcaccgg 376 |||||| |||||||| | |||||||| |||||||||||||| Sbjct: 1800436 gcacggcccgcaccaggtggcccagaagtccaccagcaccgg 1800477
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccgg 376 ||||| ||||||||||| ||||||||||| || ||||||||||| Sbjct: 824228 cggcaggggccgcaccatggcgcccagaaatcgaccagcaccgg 824271 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 gaactccaccagcaccggcg 378 |||||||||||||||||||| Sbjct: 320540 gaactccaccagcaccggcg 320559
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 327 atcatacggcacgggccgcaccacggcgcccagaactccacca 369 ||||| ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 455444 atcatgcggcaagggccgcaccatggcgcccagaaatccacca 455402
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 339 gggccgcaccacggcgcccagaactccaccagcac 373 ||||||||||||||||||||||| || |||||||| Sbjct: 3018567 gggccgcaccacggcgcccagaagtcgaccagcac 3018533
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 335 gcacgggccgcaccacggcgcccagaactccaccagcac 373 ||||||||||||||| ||||||||||| || |||||||| Sbjct: 4059083 gcacgggccgcaccagggcgcccagaaatcgaccagcac 4059045 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 gagacggcccgctgtgctgc 485 |||||||||||||||||||| Sbjct: 4085207 gagacggcccgctgtgctgc 4085226
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 319 ccggcgcaatcatacggcacgggccgcaccacggcgcccagaactccacca 369 ||||||| ||||| |||||||||||||||||| |||||||| ||||||| Sbjct: 79687 ccggcgcgatcatgcggcacgggccgcaccactcggcccagaagtccacca 79737
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 335 gcacgggccgcaccacggcgcccagaactccaccagcac 373 ||||||||||||||| ||||||||||| || |||||||| Sbjct: 829097 gcacgggccgcaccagggcgcccagaagtcgaccagcac 829135
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 327 atcatacggcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 ||||| |||||||| |||||||| ||||||||||| || || ||||||||| Sbjct: 272864 atcatgcggcacggcccgcaccagggcgcccagaagtcgacgagcaccggc 272914 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 321 ggcgcaatcatacggcacgggccgcaccacggcgcccagaactccaccagcac 373 ||||| ||||| ||||||||||||||||| |||||||| ||||||||||| Sbjct: 2588933 ggcgcgatcatccggcacgggccgcaccagacggcccagaagtccaccagcac 2588985 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 333 cggcacgggccgcaccacggcgcccagaa 361 ||||||||||||||||||| |||||||| Sbjct: 202835 cggcacgggccgcaccacgaggcccagaa 202863
>gb|BT017770.1| Zea mays clone EL01N0502E03.c mRNA sequence Length = 874 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 177 tccttcttctcgccgtccttgaacatgaggacggtggggatgctccggatgccg 230 ||||||||||| |||| |||||| || | | |||||||||||||||||||||| Sbjct: 631 tccttcttctcaccgttcttgaatatcatcatggtggggatgctccggatgccg 578
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 336 cacgggccgcaccacggcgcccagaa 361 |||||||||||||||||||||||||| Sbjct: 246414 cacgggccgcaccacggcgcccagaa 246439 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 335 gcacgggccgcaccacggcgcccagaa 361 |||||| |||||||||||||||||||| Sbjct: 549120 gcacggcccgcaccacggcgcccagaa 549094 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 158 gacggcgccgatgacgctctccttcttctc 187 ||||| |||||||||||| ||||||||||| Sbjct: 736504 gacggtgccgatgacgctttccttcttctc 736533
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 339 gggccgcaccacggcgcccagaactccaccagca 372 ||||||||||| ||||||||||| |||||||||| Sbjct: 6677448 gggccgcaccagggcgcccagaagtccaccagca 6677415
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 342 ccgcaccacggcgcccagaactccaccagcacc 374 |||||||||||||| ||||||||||||||||| Sbjct: 16876770 ccgcaccacggcgcgaagaactccaccagcacc 16876738
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 ||||| || |||||||| | ||||||||| ||||||||||||||| Sbjct: 2298614 cggcagggtccgcaccaagtcgcccagaaatccaccagcaccggc 2298570 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 343 cgcaccacggcgcccagaactccaccagcac 373 ||||||| ||||||||||| ||||||||||| Sbjct: 2802383 cgcaccagggcgcccagaaatccaccagcac 2802353
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 342 ccgcaccacggcgcccagaactccaccagcacc 374 |||||||||||||| ||||||||||||||||| Sbjct: 6583 ccgcaccacggcgcgaagaactccaccagcacc 6551
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1163_C07 Length = 107121 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 342 ccgcaccacggcgcccagaactccaccagcacc 374 |||||||||||||| ||||||||||||||||| Sbjct: 74461 ccgcaccacggcgcgaagaactccaccagcacc 74429
>dbj|AK072941.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150F04, full insert sequence Length = 1738 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 342 ccgcaccacggcgcccagaactccaccagcacc 374 |||||||||||||| ||||||||||||||||| Sbjct: 333 ccgcaccacggcgcgaagaactccaccagcacc 301
>dbj|AK062254.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G06, full insert sequence Length = 1642 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 342 ccgcaccacggcgcccagaactccaccagcacc 374 |||||||||||||| ||||||||||||||||| Sbjct: 278 ccgcaccacggcgcgaagaactccaccagcacc 246
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 333 cggcacgggccgcaccacggcgcccagaa 361 ||||||||||||||||||| ||||||||| Sbjct: 192555 cggcacgggccgcaccacgacgcccagaa 192583 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 318 accggcgcaatcatacggcacgggccgcaccacggcgcccagaactccaccag 370 ||||| ||||| || ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 959321 accggggcaatgatgcggcaagggccacaccagggcgcccagaagtcgaccag 959269
>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12 Length = 273785 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Minus Query: 342 ccgcaccacggcgcccagaactccaccagcaccggc 377 |||||||| ||||||||||| ||||| ||||||||| Sbjct: 86233 ccgcaccagggcgcccagaaatccacgagcaccggc 86198
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 342 ccgcaccacggcgcccagaactccaccagcaccggc 377 |||||||| ||||||||||| || |||||||||||| Sbjct: 4205795 ccgcaccagggcgcccagaaatcgaccagcaccggc 4205830
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 48.1 bits (24), Expect = 0.029 Identities = 39/44 (88%) Strand = Plus / Plus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccgg 376 |||||||| || |||||||| ||||| || |||||||||||||| Sbjct: 1206543 cggcacggcccacaccacggagcccaaaagtccaccagcaccgg 1206586
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 335 gcacgggccgcaccacggcgcccagaactcca 366 ||||||||||||||| ||||||||||| |||| Sbjct: 1152723 gcacgggccgcaccagggcgcccagaaatcca 1152692
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 331 tacggcacgggccgcaccacggcgcccagaa 361 ||||||| |||||||||||||| |||||||| Sbjct: 2715980 tacggcaggggccgcaccacggtgcccagaa 2715950
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 335 gcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 |||||| ||||||||||||||||| || || ||||||| |||| Sbjct: 3378207 gcacggcccgcaccacggcgcccaaaagtcaaccagcagcggc 3378165 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 332 acggcacgggccgcaccacggcgcccagaa 361 |||||||||||||||||| || |||||||| Sbjct: 2110928 acggcacgggccgcaccagggtgcccagaa 2110957
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 339 gggccgcaccacggcgcccagaactccaccagcaccggc 377 |||||||||||||| |||||||||| | |||||||||| Sbjct: 2732601 gggccgcaccacggtgcccagaacttgagcagcaccggc 2732563
>ref|XM_723657.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07784) partial mRNA Length = 642 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 343 cgcaccacggcgcccagaactccaccagcac 373 ||||||| ||||||||||| ||||||||||| Sbjct: 525 cgcaccagggcgcccagaaatccaccagcac 555
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 331 tacggcacgggccgcaccacggcgcccagaa 361 ||||||| |||||||||||||| |||||||| Sbjct: 2981631 tacggcaggggccgcaccacggtgcccagaa 2981601
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 331 tacggcacgggccgcaccacggcgcccagaa 361 ||||||| |||||||||||||| |||||||| Sbjct: 2860505 tacggcaggggccgcaccacggtgcccagaa 2860475 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gatgacgctctccttcttct 186 |||||||||||||||||||| Sbjct: 3872363 gatgacgctctccttcttct 3872382
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 331 tacggcacgggccgcaccacggcgcccagaa 361 ||||||| |||||||||||||| |||||||| Sbjct: 2716961 tacggcaggggccgcaccacggtgcccagaa 2716931
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 342 ccgcaccacggcgcccagaactccaccagcaccgg 376 |||||||||||||||||||| || || |||||||| Sbjct: 892628 ccgcaccacggcgcccagaaatcgacgagcaccgg 892662
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 331 tacggcacgggccgcaccacggcgcccagaa 361 ||||||| |||||||||||||| |||||||| Sbjct: 2717595 tacggcaggggccgcaccacggtgcccagaa 2717565
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 339 gggccgcaccacggcgcccagaa 361 ||||||||||||||||||||||| Sbjct: 3295285 gggccgcaccacggcgcccagaa 3295263
>gb|AF023161.1|AF023161 Mycobacterium smegmatis thioredoxin reductase (trxB) and thioredoxin (trxA) genes, complete cds Length = 1775 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 335 gcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 ||||||||||||||| | |||||||| || |||||||||||| Sbjct: 1333 gcacgggccgcaccaggtggcccagaaatcgaccagcaccggc 1291
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 331 tacggcacgggccgcaccacggcgcccagaa 361 ||||||| |||||||||||||| |||||||| Sbjct: 2709424 tacggcaggggccgcaccacggtgcccagaa 2709394
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 335 gcacgggccgcaccacggcgcccagaactccaccagcac 373 ||||||||||||||| ||||||||| ||||||||||| Sbjct: 6008133 gcacgggccgcaccagtccgcccagaagtccaccagcac 6008095
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 331 tacggcacgggccgcaccacggcgcccagaa 361 ||||||| |||||||||||||| |||||||| Sbjct: 3508975 tacggcaggggccgcaccacggtgcccagaa 3508945
>gb|U85942.1|ECU85942 Escherichia coli thioredoxin 2 gene, complete cds Length = 494 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 331 tacggcacgggccgcaccacggcgcccagaa 361 ||||||| |||||||||||||| |||||||| Sbjct: 235 tacggcaggggccgcaccacggtgcccagaa 205
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 331 tacggcacgggccgcaccacggcgcccagaa 361 ||||||| |||||||||||||| |||||||| Sbjct: 3439137 tacggcaggggccgcaccacggtgcccagaa 3439107
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 331 tacggcacgggccgcaccacggcgcccagaa 361 ||||||| |||||||||||||| |||||||| Sbjct: 2614795 tacggcaggggccgcaccacggtgcccagaa 2614765
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 331 tacggcacgggccgcaccacggcgcccagaa 361 ||||||| |||||||||||||| |||||||| Sbjct: 2618621 tacggcaggggccgcaccacggtgcccagaa 2618591
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 331 tacggcacgggccgcaccacggcgcccagaa 361 ||||||| |||||||||||||| |||||||| Sbjct: 2865272 tacggcaggggccgcaccacggtgcccagaa 2865242
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Minus Query: 335 gcacgggccgcaccacggcgcccagaactccaccagcaccgg 376 |||||||||||||||| |||||||| |||||||| ||||| Sbjct: 4539369 gcacgggccgcaccactcggcccagaaatccaccagaaccgg 4539328
>gb|AY184798.1| Chlamydomonas reinhardtii thioredoxin o (TRXo) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1196 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 317 caccggcgcaatcatacggcacgggccgcaccac 350 ||||||||||||||| ||||| || ||||||||| Sbjct: 275 caccggcgcaatcatgcggcagggcccgcaccac 242
>emb|AL355775.1|ATF12M12 Arabidopsis thaliana DNA chromosome 3, BAC clone F12M12 Length = 106730 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 catatagatacatatatattgt 51 |||||||||||||||||||||| Sbjct: 26128 catatagatacatatatattgt 26107
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Minus Query: 344 gcaccacggcgcccagaactccaccagcaccggc 377 |||||||||||||||||| || | |||||||||| Sbjct: 282249 gcaccacggcgcccagaaatcgatcagcaccggc 282216
>gb|AE012374.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 282 of 460 of the complete genome Length = 10029 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Minus Query: 335 gcacgggccgcaccacggcgcccagaactccaccagcaccgg 376 |||||| |||||||| | |||||||| |||||||||||||| Sbjct: 3946 gcacggcccgcaccaggtggcccagaagtccaccagcaccgg 3905
>gb|AY105763.1| Zea mays PCO101043 mRNA sequence Length = 877 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 ggtggggatgctccggatgccg 230 |||||||||||||||||||||| Sbjct: 583 ggtggggatgctccggatgccg 562
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 336 cacgggccgcaccacggcgcccagaa 361 ||||||||||||||||| |||||||| Sbjct: 2666520 cacgggccgcaccacggggcccagaa 2666495
>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome Length = 1469720 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcac 373 ||||| |||||||||||||| ||||| || || |||||||| Sbjct: 640165 cggcaggggccgcaccacggtgcccaaaaatctaccagcac 640205 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcac 373 ||||| |||||||||||||| ||||| || || |||||||| Sbjct: 609154 cggcaggggccgcaccacggtgcccaaaaatctaccagcac 609194
>ref|NM_112404.3| Arabidopsis thaliana ATHM4; electron transporter/ thiol-disulfide exchange intermediate AT3G15360 (ATHM4) mRNA, complete cds Length = 882 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 326 aatcatacggcacgggccgcaccacggcgcccagaactccaccag 370 |||||||||||| || || ||||| || ||||||||||| ||||| Sbjct: 426 aatcatacggcaaggtccacaccatggtgcccagaactcgaccag 382
>gb|AC111024.13| Mus musculus chromosome 17, clone RP23-103P1, complete sequence Length = 219128 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gaggaacagaacagaaagggt 74 ||||||||||||||||||||| Sbjct: 175974 gaggaacagaacagaaagggt 175994
>gb|AC115055.9| Mus musculus chromosome 3, clone RP24-346I12, complete sequence Length = 204367 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 acagaacagaaagggtgtgtg 79 ||||||||||||||||||||| Sbjct: 111313 acagaacagaaagggtgtgtg 111333
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccggc 377 |||| ||| |||| || |||||||||||| || |||||||||||| Sbjct: 88065 cggctcggtccgctccgcggcgcccagaaatcgaccagcaccggc 88021
>gb|AC024081.1| Arabidopsis thaliana chromosome III P1 MJK13 genomic sequence, complete sequence Length = 82893 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 326 aatcatacggcacgggccgcaccacggcgcccagaactccaccag 370 |||||||||||| || || ||||| || ||||||||||| ||||| Sbjct: 3685 aatcatacggcaaggtccacaccatggtgcccagaactcgaccag 3641
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 333 cggcacgggccgcaccacggcgcccagaa 361 ||||| || |||||||||||||||||||| Sbjct: 1007279 cggcatggcccgcaccacggcgcccagaa 1007307
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60 Length = 196677 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 atcatatagatacatatatattgtc 52 |||||||| |||||||||||||||| Sbjct: 107727 atcatatatatacatatatattgtc 107751
>emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome 4, BAC clone T32A16 (ESSA project) Length = 89826 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 atcatatagatacatatatattgtc 52 |||||||| |||||||||||||||| Sbjct: 57821 atcatatatatacatatatattgtc 57845
>gb|AC091694.9| Mus musculus Strain C57BL6/J chromosome 11 BAC, RP23-316F3, Complete Sequence, complete sequence Length = 213119 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 20 atacgtacatcatatagatacatatatat 48 |||| ||||||||||| |||||||||||| Sbjct: 55087 atacatacatcatatatatacatatatat 55059
>gb|AF375443.1| Arabidopsis thaliana AT3g15360/MJK13_2 mRNA, complete cds Length = 858 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 326 aatcatacggcacgggccgcaccacggcgcccagaactccaccag 370 |||||||||||| || || ||||| || ||||||||||| ||||| Sbjct: 402 aatcatacggcaaggtccacaccatggtgcccagaactcgaccag 358
>gb|AC024094.28| Homo sapiens 4 RP11-193M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161973 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 atatagatacatatatattgt 51 ||||||||||||||||||||| Sbjct: 155250 atatagatacatatatattgt 155270
>gb|AC073475.4| Homo sapiens BAC clone RP11-679C8 from 4, complete sequence Length = 173005 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 atatagatacatatatattgt 51 ||||||||||||||||||||| Sbjct: 126864 atatagatacatatatattgt 126844
>gb|AC169373.2| Sorghum bicolor clone SB_BBc0188M08, complete sequence Length = 137889 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 aagatcaattagctgccgatg 122 ||||||||||||||||||||| Sbjct: 134347 aagatcaattagctgccgatg 134327
>gb|AY060538.1| Arabidopsis thaliana AT3g15360/MJK13_2 mRNA, complete cds Length = 582 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 326 aatcatacggcacgggccgcaccacggcgcccagaactccaccag 370 |||||||||||| || || ||||| || ||||||||||| ||||| Sbjct: 366 aatcatacggcaaggtccacaccatggtgcccagaactcgaccag 322
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcac 373 ||||| ||||||||||| ||||||||| ||||||||||| Sbjct: 3952005 cggcaggggccgcaccattccgcccagaagtccaccagcac 3952045
>emb|BX818876.1|CNS0A9WR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB22ZC12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 461 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 326 aatcatacggcacgggccgcaccacggcgcccagaactccaccag 370 |||||||||||| || || ||||| || ||||||||||| ||||| Sbjct: 360 aatcatacggcaaggtccacaccatggtgcccagaactcgaccag 404
>emb|BX822247.1|CNS0A5US Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB22ZH10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 722 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 326 aatcatacggcacgggccgcaccacggcgcccagaactccaccag 370 |||||||||||| || || ||||| || ||||||||||| ||||| Sbjct: 404 aatcatacggcaaggtccacaccatggtgcccagaactcgaccag 360
>emb|BX823925.1|CNS0A5C4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZA04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 759 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 326 aatcatacggcacgggccgcaccacggcgcccagaactccaccag 370 |||||||||||| || || ||||| || ||||||||||| ||||| Sbjct: 400 aatcatacggcaaggtccacaccatggtgcccagaactcgaccag 356
>gb|AY088157.1| Arabidopsis thaliana clone 42151 mRNA, complete sequence Length = 744 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 326 aatcatacggcacgggccgcaccacggcgcccagaactccaccag 370 |||||||||||| || || ||||| || ||||||||||| ||||| Sbjct: 410 aatcatacggcaaggtccacaccatggtgcccagaactcgaccag 366
>emb|BX004843.10| Zebrafish DNA sequence from clone CH211-165E15, complete sequence Length = 131026 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 atatagatacatatatattgt 51 ||||||||||||||||||||| Sbjct: 130599 atatagatacatatatattgt 130579
>dbj|AB022218.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJK13 Length = 82893 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 326 aatcatacggcacgggccgcaccacggcgcccagaactccaccag 370 |||||||||||| || || ||||| || ||||||||||| ||||| Sbjct: 3685 aatcatacggcaaggtccacaccatggtgcccagaactcgaccag 3641
>gb|AF095752.1|AF095752 Arabidopsis thaliana thioredoxin m4 mRNA, complete cds Length = 760 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 326 aatcatacggcacgggccgcaccacggcgcccagaactccaccag 370 |||||||||||| || || ||||| || ||||||||||| ||||| Sbjct: 381 aatcatacggcaaggtccacaccatggtgcccagaactcgaccag 337
>gb|AY108587.1| Zea mays PCO080943 mRNA sequence Length = 1030 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 177 tccttcttctcgccgtccttgaacatgaggacggtggggatgctccgga 225 |||||||||||||| |||||||| || | ||||||||||||||||| Sbjct: 619 tccttcttctcgccatccttgaagatcatcgtggtggggatgctccgga 571
>emb|CT010580.7| Mouse DNA sequence from clone RP23-233G23 on chromosome 17, complete sequence Length = 220567 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gaggaacagaacagaaagggt 74 ||||||||||||||||||||| Sbjct: 214745 gaggaacagaacagaaagggt 214765
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete sequence Length = 116156 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 28 atcatatagatacatatatattgtc 52 |||||||| |||||||||||||||| Sbjct: 104884 atcatatatatacatatatattgtc 104860
>emb|AL663089.9| Mouse DNA sequence from clone RP23-393L8 on chromosome 11, complete sequence Length = 56571 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 20 atacgtacatcatatagatacatatatat 48 |||| ||||||||||| |||||||||||| Sbjct: 10937 atacatacatcatatatatacatatatat 10965
>gb|AC100500.10| Mus musculus chromosome 3, clone RP23-143I10, complete sequence Length = 179369 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gcagcactttatcttcccca 291 |||||||||||||||||||| Sbjct: 5727 gcagcactttatcttcccca 5746
>gb|AC103399.9| Mus musculus chromosome 3, clone RP23-310N18, complete sequence Length = 154918 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 gcagcactttatcttcccca 291 |||||||||||||||||||| Sbjct: 95571 gcagcactttatcttcccca 95552
>gb|AC148114.8| Mus musculus chromosome 8, clone RP24-134B6, complete sequence Length = 155465 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 catatagatacatatatatt 49 |||||||||||||||||||| Sbjct: 130685 catatagatacatatatatt 130666
>gb|AC123746.20| Mus musculus chromosome 1, clone RP24-122E21, complete sequence Length = 160429 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 catatagatacatatatatt 49 |||||||||||||||||||| Sbjct: 16362 catatagatacatatatatt 16343
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gccgcaccacggcgcccaga 360 |||||||||||||||||||| Sbjct: 91857 gccgcaccacggcgcccaga 91838
>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence Length = 203478 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 catatagatacatatatatt 49 |||||||||||||||||||| Sbjct: 16921 catatagatacatatatatt 16940
>ref|NM_144783.1| Mus musculus Wilms tumor homolog (Wt1), mRNA Length = 3089 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 acatcatatagatacatatatatt 49 |||||||||| ||||||||||||| Sbjct: 2944 acatcatatatatacatatatatt 2921
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 gcccagaactccaccagcaccggc 377 |||||||| ||||||||||||||| Sbjct: 5328023 gcccagaaatccaccagcaccggc 5328000
>gb|AC111110.21| Mus musculus chromosome 1, clone RP23-201B13, complete sequence Length = 246043 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 tacatcatatagatacatatatat 48 ||||||||||| |||||||||||| Sbjct: 197859 tacatcatatatatacatatatat 197836
>gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome 3, complete sequence Length = 218807 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tcatatagatacatatatat 48 |||||||||||||||||||| Sbjct: 13423 tcatatagatacatatatat 13442
>gb|AY533440.1| Listeria monocytogenes IlvD (ilvD) gene, ilvD-10 allele, partial cds Length = 453 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 cttgcacttgcaaacgaagc 465 |||||||||||||||||||| Sbjct: 271 cttgcacttgcaaacgaagc 290
>gb|AY533439.1| Listeria monocytogenes IlvD (ilvD) gene, ilvD-9 allele, partial cds Length = 453 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 cttgcacttgcaaacgaagc 465 |||||||||||||||||||| Sbjct: 271 cttgcacttgcaaacgaagc 290
>gb|AY533438.1| Listeria monocytogenes IlvD (ilvD) gene, ilvD-8 allele, partial cds Length = 453 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 cttgcacttgcaaacgaagc 465 |||||||||||||||||||| Sbjct: 271 cttgcacttgcaaacgaagc 290
>gb|AY533437.1| Listeria monocytogenes IlvD (ilvD) gene, ilvD-7 allele, partial cds Length = 453 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 cttgcacttgcaaacgaagc 465 |||||||||||||||||||| Sbjct: 271 cttgcacttgcaaacgaagc 290
>gb|AY533436.1| Listeria monocytogenes IlvD (ilvD) gene, ilvD-6 allele, partial cds Length = 453 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 cttgcacttgcaaacgaagc 465 |||||||||||||||||||| Sbjct: 271 cttgcacttgcaaacgaagc 290
>gb|AY533435.1| Listeria monocytogenes IlvD (ilvD) gene, ilvD-5 allele, partial cds Length = 453 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 cttgcacttgcaaacgaagc 465 |||||||||||||||||||| Sbjct: 271 cttgcacttgcaaacgaagc 290
>gb|AY533434.1| Listeria monocytogenes IlvD (ilvD) gene, ilvD-4 allele, partial cds Length = 453 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 cttgcacttgcaaacgaagc 465 |||||||||||||||||||| Sbjct: 271 cttgcacttgcaaacgaagc 290
>emb|Z81552.1|CEF56G4 Caenorhabditis elegans Cosmid F56G4, complete sequence Length = 38062 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 aatcatacggcacgggccgcacca 349 |||||||||||||||||| ||||| Sbjct: 35225 aatcatacggcacgggccacacca 35202
>gb|AC124230.6| Mus musculus chromosome 1, clone RP23-474K11, complete sequence Length = 202996 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 tacatcatatagatacatatatat 48 ||||||||||| |||||||||||| Sbjct: 1404 tacatcatatatatacatatatat 1381
>emb|AL136987.11| Human DNA sequence from clone RP5-1011O1 on chromosome 1 Contains the RGS1 gene for regulator of G-protein signalling 1, complete sequence Length = 122562 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 catatagatacatatatatt 49 |||||||||||||||||||| Sbjct: 23277 catatagatacatatatatt 23296
>emb|AL078622.7|HSDJ925J7 Human DNA sequence from clone RP5-925J7 on chromosome 22, complete sequence Length = 98447 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 tatattgtctgaggaacagaacag 67 |||||||||||| ||||||||||| Sbjct: 21819 tatattgtctgatgaacagaacag 21796
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gccgcaccacggcgcccaga 360 |||||||||||||||||||| Sbjct: 91867 gccgcaccacggcgcccaga 91848
>emb|BX294142.1| Pirellula sp. strain 1 complete genome; segment 10/24 Length = 294050 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 334 ggcacgggccgcaccacggcgcccagaactccacca 369 ||||||| |||||||| | |||||||||||| |||| Sbjct: 239280 ggcacggtccgcaccaggtcgcccagaactcaacca 239245
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gccgcaccacggcgcccaga 360 |||||||||||||||||||| Sbjct: 91902 gccgcaccacggcgcccaga 91883
>emb|AL162756.2|NMA5Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 5/7 Length = 329861 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 gcacgggccgcaccacggcgccca 358 |||||||||||||||||| ||||| Sbjct: 151755 gcacgggccgcaccacggagccca 151732
>gb|AE011758.1| Xanthomonas axonopodis pv. citri str. 306, section 136 of 469 of the complete genome Length = 10562 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 342 ccgcaccacggcgcccagaactccacca 369 |||||||| ||||||||||| ||||||| Sbjct: 319 ccgcaccagggcgcccagaaatccacca 346
>gb|AC107029.4| Homo sapiens 3 BAC RP11-550H20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182634 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 catatagatacatatatatt 49 |||||||||||||||||||| Sbjct: 150828 catatagatacatatatatt 150847
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 333 cggcacgggccgcaccacggcgcccagaactccaccagcaccgg 376 ||||| |||||||||||| |||||||| |||||||| ||||| Sbjct: 4692590 cggcaagggccgcaccactcggcccagaaatccaccagaaccgg 4692633
>ref|NM_136868.1| Drosophila melanogaster CG13189-RA (CG13189), mRNA Length = 1881 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ccacggcgcccagaactcca 366 |||||||||||||||||||| Sbjct: 1287 ccacggcgcccagaactcca 1268
>gb|AY095042.1| Drosophila melanogaster LD29234 full insert cDNA Length = 1877 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ccacggcgcccagaactcca 366 |||||||||||||||||||| Sbjct: 1268 ccacggcgcccagaactcca 1249
>ref|NM_079884.3| Drosophila melanogaster Zn finger homeodomain 2 CG1449-RA (zfh2), mRNA Length = 10571 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 atcatatagatacatatata 47 |||||||||||||||||||| Sbjct: 9789 atcatatagatacatatata 9808
>dbj|AK134322.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030414P12 product:unclassifiable, full insert sequence Length = 5121 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tcatatagatacatatatat 48 |||||||||||||||||||| Sbjct: 2025 tcatatagatacatatatat 2006
>dbj|AK135464.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820425E15 product:unclassifiable, full insert sequence Length = 1507 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 catatagatacatatatatt 49 |||||||||||||||||||| Sbjct: 398 catatagatacatatatatt 417
>gb|AC055723.22| Homo sapiens 3 BAC RP11-201E8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166787 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 catatagatacatatatatt 49 |||||||||||||||||||| Sbjct: 2815 catatagatacatatatatt 2834
>gb|AC018478.4| Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone BACH57F14, complete sequence Length = 103809 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 atcatatagatacatatata 47 |||||||||||||||||||| Sbjct: 83542 atcatatagatacatatata 83561
>gb|AC010668.7| Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone BACR44L03, complete sequence Length = 172190 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 atcatatagatacatatata 47 |||||||||||||||||||| Sbjct: 23332 atcatatagatacatatata 23351
>dbj|AK013905.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3021401A19 product:Wilms tumor homolog, full insert sequence Length = 955 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 acatcatatagatacatatatatt 49 |||||||||| ||||||||||||| Sbjct: 810 acatcatatatatacatatatatt 787
>emb|AL512584.13| Mouse DNA sequence from clone RP23-232D1 on chromosome 2, complete sequence Length = 141386 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 acatcatatagatacatatatatt 49 |||||||||| ||||||||||||| Sbjct: 132746 acatcatatatatacatatatatt 132723
>gb|M63450.1|DROZFH2 Drosophila melanogaster zinc-finger homeodomain protein 2 (zfh-2) mRNA, complete cds Length = 10571 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 atcatatagatacatatata 47 |||||||||||||||||||| Sbjct: 9789 atcatatagatacatatata 9808
>gb|AC092230.1|AC092230 Drosophila melanogaster, chromosome 2L, region 26F-27X, BAC clone BACR25K24, complete sequence Length = 174376 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 catatagatacatatatatt 49 |||||||||||||||||||| Sbjct: 109873 catatagatacatatatatt 109854
>ref|NM_060512.2| Caenorhabditis elegans F56G4.5 (Thioredoxins) mRNA, complete cds Length = 1900 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 aatcatacggcacgggccgcacca 349 |||||||||||||||||| ||||| Sbjct: 121 aatcatacggcacgggccacacca 98
>ref|XM_393195.2| PREDICTED: Apis mellifera similar to CG3937-PD, isoform D (LOC409697), mRNA Length = 3444 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tctccttcttctcgccgtccttga 198 ||||||||| |||||||||||||| Sbjct: 1099 tctccttctcctcgccgtccttga 1076
>gb|AC007474.5|AC007474 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone BACR14L19, complete sequence Length = 192763 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ccacggcgcccagaactcca 366 |||||||||||||||||||| Sbjct: 18526 ccacggcgcccagaactcca 18507
>dbj|AP006435.1| Sus scrofa CC chemokine receptor genes (CCR3, CCR2, CCR5, CCRL2, LTF), complete and partial cds, clone: 0479G08 Length = 144233 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 catatagatacatatatattgtct 53 |||||| ||||||||||||||||| Sbjct: 133200 catatatatacatatatattgtct 133177
>dbj|AP006185.1| Sus scrofa CC chemokine receptor genes (CCR2, CCR5, CCRL2, LTF, TMEM7, LRRC2), complete cds, clone: 0475A03 Length = 165558 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 catatagatacatatatattgtct 53 |||||| ||||||||||||||||| Sbjct: 64595 catatatatacatatatattgtct 64572
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ccttcttctcgccgtccttg 197 |||||||||||||||||||| Sbjct: 8150862 ccttcttctcgccgtccttg 8150881
>ref|XM_319908.2| Anopheles gambiae str. PEST ENSANGP00000025119 (ENSANGG00000021630), partial mRNA Length = 1275 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ccttcttctcgccgtccttg 197 |||||||||||||||||||| Sbjct: 316 ccttcttctcgccgtccttg 297
>gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete sequence Length = 214016 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tcatatagatacatatatat 48 |||||||||||||||||||| Sbjct: 165617 tcatatagatacatatatat 165636
>emb|BX649586.4| Zebrafish DNA sequence from clone CH211-1A22 in linkage group 18, complete sequence Length = 128751 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 tagtcctttgccagttcgtc 313 |||||||||||||||||||| Sbjct: 14092 tagtcctttgccagttcgtc 14111
>gb|AC005466.5|AC005466 Drosophila melanogaster, chromosome 2R, region 48C2-48C5, P1 clone DS03299, complete sequence Length = 72986 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ccacggcgcccagaactcca 366 |||||||||||||||||||| Sbjct: 45129 ccacggcgcccagaactcca 45110
>gb|AE003614.4| Drosophila melanogaster chromosome 2L, section 23 of 83 of the complete sequence Length = 259718 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 catatagatacatatatatt 49 |||||||||||||||||||| Sbjct: 136429 catatagatacatatatatt 136410
>gb|AE003824.3| Drosophila melanogaster chromosome 2R, section 26 of 73 of the complete sequence Length = 268836 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ccacggcgcccagaactcca 366 |||||||||||||||||||| Sbjct: 173870 ccacggcgcccagaactcca 173851
>gb|AE003843.5| Drosophila melanogaster chromosome 4, section 3 of 5 of the complete sequence Length = 328561 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 atcatatagatacatatata 47 |||||||||||||||||||| Sbjct: 69661 atcatatagatacatatata 69680
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 gcccagaactccaccagcaccggc 377 |||||||| ||||||||||||||| Sbjct: 598839 gcccagaagtccaccagcaccggc 598862
>dbj|AP002960.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-187P2, complete sequence Length = 83000 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tcatatagatacatatatat 48 |||||||||||||||||||| Sbjct: 19511 tcatatagatacatatatat 19530
>gb|AC004069.1|AC004069 Homo sapiens chromosome 4 clone B71M12 map 4q25, complete sequence Length = 135648 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 catgttgtcccaattcttct 414 |||||||||||||||||||| Sbjct: 123088 catgttgtcccaattcttct 123069
>gb|AC004247.1|AC004247 Drosophila melanogaster (P1 DS07773 (D154)) DNA sequence, complete sequence Length = 64674 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 catatagatacatatatatt 49 |||||||||||||||||||| Sbjct: 2548 catatagatacatatatatt 2567
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 cttgcacttgcaaacgaagc 465 |||||||||||||||||||| Sbjct: 2037196 cttgcacttgcaaacgaagc 2037215
>gb|L15445.1|CYYNACHANN Cyanea capillata sodium channel (putative) mRNA, complete cds Length = 5984 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gacgctctccttcttctcgc 189 |||||||||||||||||||| Sbjct: 1505 gacgctctccttcttctcgc 1486
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 342 ccgcaccacggcgcccagaactccaccagcac 373 ||||||||||| |||||||| || |||||||| Sbjct: 60246 ccgcaccacggtgcccagaaatcgaccagcac 60277
>gb|M55512.1|MUSWT1 Mouse Wilms' tumor mRNA, complete cds Length = 3089 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 acatcatatagatacatatatatt 49 |||||||||| ||||||||||||| Sbjct: 2944 acatcatatatatacatatatatt 2921
>dbj|AB003753.1| Rattus norvegicus genes for high sulfur protein B2E and high sulfur protein B2F, complete cds Length = 4025 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tcatatagatacatatatat 48 |||||||||||||||||||| Sbjct: 85 tcatatagatacatatatat 104 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,971,148 Number of Sequences: 3902068 Number of extensions: 3971148 Number of successful extensions: 152922 Number of sequences better than 10.0: 163 Number of HSP's better than 10.0 without gapping: 162 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 150077 Number of HSP's gapped (non-prelim): 2839 length of query: 520 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 497 effective length of database: 17,143,297,704 effective search space: 8520218958888 effective search space used: 8520218958888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
