| Clone Name | rbaal38f18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CDCP1_MOUSE (Q5U462) CUB domain-containing protein 1 precursor (... | 28 | 5.0 |
|---|
>CDCP1_MOUSE (Q5U462) CUB domain-containing protein 1 precursor (Transmembrane| and associated with src kinases) (Membrane glycoprotein gp140) (CD318 antigen) Length = 833 Score = 28.5 bits (62), Expect = 5.0 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = -2 Query: 146 LPPLTVIVSLVIGIAGIGALLVYGL 72 L P TV +++VIG AG GALL++ L Sbjct: 659 LTPRTVDLAVVIGAAGGGALLLFAL 683 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,491,813 Number of Sequences: 219361 Number of extensions: 346848 Number of successful extensions: 1026 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1020 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1026 length of database: 80,573,946 effective HSP length: 44 effective length of database: 70,922,062 effective search space used: 1702129488 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)