ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal38f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1K1683_HUMAN (Q9H0B3) Protein KIAA1683 33 0.31
2K1683_MACFA (Q8WNU4) Protein KIAA1683 homolog (Fragment) 33 0.41
3SUHW_DROVI (Q08876) Protein suppressor of hairy wing 30 3.5
4GALM_PIG (Q9GKX6) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mut... 30 3.5
5VE1_HPV51 (P26544) Replication protein E1 (EC 3.6.1.-) (ATP-depe... 29 4.5
6HMCT_BOMMO (P98092) Hemocytin precursor (Humoral lectin) 29 4.5
7ZN445_HUMAN (P59923) Zinc finger protein 445 29 4.5
8SIA4B_PANTR (Q6KB58) CMP-N-acetylneuraminate-beta-galactosamide-... 29 5.9
9SIA4B_HUMAN (Q16842) CMP-N-acetylneuraminate-beta-galactosamide-... 29 5.9
10ZN445_MOUSE (Q8R2V3) Zinc finger protein 445 29 5.9
11GALM_BOVIN (Q5EA79) Aldose 1-epimerase (EC 5.1.3.3) (Galactose m... 28 7.7

>K1683_HUMAN (Q9H0B3) Protein KIAA1683|
          Length = 1180

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
 Frame = -1

Query: 445  APPPLALDVGSSRPRRDLTGAPYPSRCLSGYPLEAETWPAAV--RQSYQAQDAPDKSEHR 272
            +PP + + VGSS       G   P+R + G     E  P AV    +YQ      +  HR
Sbjct: 1054 SPPSVVMLVGSSPRTCHTCGRTQPTRVVQGMGQGTE-GPGAVSWASAYQLAALSPRQPHR 1112

Query: 271  DRRASTWILESTCRMIKSSSKLKTSQVQVRPTQVIQMARSWRG 143
              +A+T  ++S  R  K   +++  Q+  +  Q      +WRG
Sbjct: 1113 QDKAAT-AIQSAWRGFKIRQQMRQQQMAAKIVQA-----TWRG 1149



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>K1683_MACFA (Q8WNU4) Protein KIAA1683 homolog (Fragment)|
          Length = 798

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 25/101 (24%), Positives = 41/101 (40%)
 Frame = -1

Query: 445 APPPLALDVGSSRPRRDLTGAPYPSRCLSGYPLEAETWPAAVRQSYQAQDAPDKSEHRDR 266
           +PP + + VGSS       G   P+R + G    A    A  R S   +  P   + R R
Sbjct: 664 SPPSVVMLVGSSPRTCHTCGRTQPTRVVQGMGRGAGGPGAVSRASAYQRAVPSPRQPRRR 723

Query: 265 RASTWILESTCRMIKSSSKLKTSQVQVRPTQVIQMARSWRG 143
             +   ++S  R  K   +++  Q+  +  Q      +WRG
Sbjct: 724 DKAATAIQSAWRGFKIRQQMRQQQMAAKMVQA-----TWRG 759



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>SUHW_DROVI (Q08876) Protein suppressor of hairy wing|
          Length = 899

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = -3

Query: 422 RRKLETQARPYRCSLPISMF---IRLSS*GRDVAGGGAAELSGARCPRQIRAPGSESEYM 252
           R   +T  RPY CSL I  F    +L    +D      A  +   C R  R      E++
Sbjct: 512 RTHSKTHLRPYACSLCIQKFKTEKQLERHVKDHTRQKRASFACTECTRSFRTSALLKEHL 571

Query: 251 DSGEY 237
           D+G++
Sbjct: 572 DAGDH 576



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>GALM_PIG (Q9GKX6) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)|
          Length = 342

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -1

Query: 391 TGAPYPSRCLSGYPLEAETWPAAVRQSY 308
           TGA YP    SG+ LE + WP AV Q +
Sbjct: 294 TGAVYPKH--SGFCLETQNWPNAVNQPH 319



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>VE1_HPV51 (P26544) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 634

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +2

Query: 5   ILDKYPSTGYRNKEKTMISRMLAHNHDHGLSLLDSSRIGGRSPHRTATPAAC 160
           +LD YP +GY N +   +   L  +  HG S       GG S     T  +C
Sbjct: 121 LLDSYPDSGYGNTQVETVEATLQVDGQHGGSQNSVCSSGGGSVMDVETTESC 172



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>HMCT_BOMMO (P98092) Hemocytin precursor (Humoral lectin)|
          Length = 3133

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 15/67 (22%)
 Frame = +2

Query: 8    LDKYPSTGYRNKEKTMISRMLAHN----HDHGLSLLDSSRIGGRS-----------PHRT 142
            ++K+P TG+     +  S  + +N    H+       +++  G S           PHR 
Sbjct: 3005 VNKFPITGFTEVHGSCDSGTIYNNQTGTHESACECCQAAKYSGVSVRLTCEDGTVRPHRV 3064

Query: 143  ATPAACH 163
            ATPA CH
Sbjct: 3065 ATPARCH 3071



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>ZN445_HUMAN (P59923) Zinc finger protein 445|
          Length = 1031

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 440 SSTSSRRRKLETQARPYRCSLPISMFIRLSS 348
           SS  +R  K+ T  +PY+C L    F RLS+
Sbjct: 525 SSNCARHEKIHTGVKPYKCDLCEKAFRRLSA 555



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>SIA4B_PANTR (Q6KB58) CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,|
           3-sialyltransferase (EC 2.4.99.-) (Beta-galactoside
           alpha-2,3-sialyltransferase) (Alpha 2,3-ST) (Gal-NAc6S)
           (Gal-beta-1,3-GalNAc-alpha-2,3-sialyltransferase)
           (ST3GalA.2) (SIAT4-B) (S
          Length = 350

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/45 (44%), Positives = 24/45 (53%)
 Frame = +3

Query: 285 LSGASCA**LCRTAAGHVSASRG*PDKHRDG*GAPVRSRLGLELP 419
           LSG SCA   CR   G   AS    D H DG  +PV +R  ++LP
Sbjct: 65  LSGKSCA---CRRCMGDAGASDWF-DSHFDGNISPVWTRENMDLP 105



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>SIA4B_HUMAN (Q16842) CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,|
           3-sialyltransferase (EC 2.4.99.-) (Beta-galactoside
           alpha-2,3-sialyltransferase) (Alpha 2,3-ST) (Gal-NAc6S)
           (Gal-beta-1,3-GalNAc-alpha-2,3-sialyltransferase)
           (ST3GalA.2) (SIAT4-B) (S
          Length = 350

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/45 (44%), Positives = 24/45 (53%)
 Frame = +3

Query: 285 LSGASCA**LCRTAAGHVSASRG*PDKHRDG*GAPVRSRLGLELP 419
           LSG SCA   CR   G   AS    D H DG  +PV +R  ++LP
Sbjct: 65  LSGKSCA---CRRCMGDAGASDWF-DSHFDGNISPVWTRENMDLP 105



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>ZN445_MOUSE (Q8R2V3) Zinc finger protein 445|
          Length = 986

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 437 STSSRRRKLETQARPYRCSLPISMFIRLSS 348
           S   R  K+ T  +PY+CSL    F RLSS
Sbjct: 483 SNRIRHEKIHTGVKPYQCSLCEKAFQRLSS 512



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>GALM_BOVIN (Q5EA79) Aldose 1-epimerase (EC 5.1.3.3) (Galactose mutarotase)|
          Length = 342

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 391 TGAPYPSRCLSGYPLEAETWPAAVRQSY 308
           +GA YP    SG+ LE ++WP AV Q +
Sbjct: 294 SGAGYPKH--SGFCLETQSWPDAVNQPH 319


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,083,575
Number of Sequences: 219361
Number of extensions: 968019
Number of successful extensions: 2835
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2831
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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