>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  330 bits (845), Expect = 3e-90
 Identities = 165/179 (92%), Positives = 166/179 (92%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    E P  P    GNDFSTLYAP IRDGRMEKFYWAPTREDRIGVCKGI
Sbjct: 248 PTNVQLPG-MYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGI 306

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG
Sbjct: 307 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 366

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 140
           PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK
Sbjct: 367 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 425

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  296 bits (759), Expect = 3e-80
 Identities = 143/179 (79%), Positives = 158/179 (88%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    E P  P    GNDFSTLYAP IRDGRMEKFYWAPTR+DRIGVCKGI
Sbjct: 251 PTNVQLPG-MYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGI 309

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           F+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG  G+ENI KRLVNSR+G
Sbjct: 310 FQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDG 369

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 140
           P TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYGK
Sbjct: 370 PVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGK 428

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  294 bits (753), Expect = 1e-79
 Identities = 142/178 (79%), Positives = 158/178 (88%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    + P  P    GNDFSTLYAP IRDGRMEKFYWAPTR+DR+GVCKGI
Sbjct: 251 PTNVQLPG-MYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGI 309

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           FRTDNVPDE +V++VD+FPGQSIDFFGALRARVYDDEVRKWV + GVENI KRLVNSREG
Sbjct: 310 FRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREG 369

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 143
           PP F+QPKMTIEKL+EYG+MLV+EQENVKRVQLA++YLSEAALG AN DAMKTG+FYG
Sbjct: 370 PPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  290 bits (743), Expect = 2e-78
 Identities = 141/177 (79%), Positives = 158/177 (89%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    + P  P    GNDFSTLYAP IRDGRMEKFYWAPTREDRIGVCKGI
Sbjct: 257 PTNVQLPG-MYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGI 315

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           FRTD V +E VV+LVDTFPGQSIDFFGALRARVYDDEVR+WV E GVENI+++LVNS+EG
Sbjct: 316 FRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEG 375

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFY 146
           PPTF+QPK+TIEKL+EYGHMLV EQENVKRVQLADKYL+EAALG+AN+DAMKTG+F+
Sbjct: 376 PPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  287 bits (734), Expect = 2e-77
 Identities = 141/178 (79%), Positives = 154/178 (86%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    E P  P    GNDFSTLYAP IRDGRMEKFYWAPTREDRIGVC GI
Sbjct: 261 PTNVQLPG-MYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGI 319

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           FR+DNV  E +V+LVDTFPGQSIDFFGALRARVYDDEVRKW+  +GV++I K+LVNS+EG
Sbjct: 320 FRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEG 379

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 143
           PPTF+QPKMTIEKL+EYG+MLVQEQENVKRVQLADKYLSEAALG AN DAM TG FYG
Sbjct: 380 PPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  285 bits (729), Expect = 9e-77
 Identities = 139/178 (78%), Positives = 154/178 (86%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    E P  P    GNDFSTLYAP IRDGRMEKFYWAPTREDRIGVCKGI
Sbjct: 261 PTNVQLPG-MYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGI 319

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           FRTDNV D+ +V+LVDTFPGQSIDFFGALRARVY DEVRKWV E+GV+ I K+LVNS+EG
Sbjct: 320 FRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEG 379

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 143
           PP+F+QPKMTI+KL+ YG MLVQEQENVKRVQLADKY+SEAALG AN+DA+K G FYG
Sbjct: 380 PPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  285 bits (728), Expect = 1e-76
 Identities = 137/176 (77%), Positives = 154/176 (87%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    E P  P    GNDFSTLYAP IRDGRMEKFYWAPTREDRIGVCKGI
Sbjct: 261 PTNVQLPG-MYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGI 319

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           FRTDNVP+E +V++VD FPGQSIDFFGALRARVYDDEVRKWV E+GV+ I K+LVNS+EG
Sbjct: 320 FRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEG 379

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAF 149
           PPTF+QPKMTI+KL++YG+MLV+EQENVKRVQLADKY+SEAALG AN DA+K G F
Sbjct: 380 PPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  277 bits (708), Expect = 2e-74
 Identities = 131/177 (74%), Positives = 154/177 (87%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    E    P    GNDFSTLYAP IRDGRMEKFYWAPTR+DR+GVCKGI
Sbjct: 263 PTNVQLPG-MYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGI 321

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           FRTD VP+E + +LVDTFPGQSIDFFGALRARVYDDEVRKW+  +GV+   K+LVNS+EG
Sbjct: 322 FRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEG 381

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFY 146
           PPTFDQPKM+++KL++YG+MLVQEQENVKRVQLADKYL+EAALG AN+DA+K+G+F+
Sbjct: 382 PPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  273 bits (699), Expect = 3e-73
 Identities = 134/174 (77%), Positives = 150/174 (86%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    E    P    GNDFSTLYAP IRDGRMEKFYWAPTREDRIGVCKGI
Sbjct: 260 PTNVQLPG-MYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGI 318

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           FRTDNVP+EAVV++VD+FPGQSIDFFGALRARVYDDEVRKWV   G+E I ++L+NSR+G
Sbjct: 319 FRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDG 378

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTG 155
           PPTF+QPKMT+EKL+EYG+MLVQEQENVKRVQLA+ YL EAALG AN DA+ TG
Sbjct: 379 PPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  273 bits (698), Expect = 3e-73
 Identities = 134/176 (76%), Positives = 149/176 (84%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    E    P    GNDFSTLYAP IRDGRMEKFYWAPTREDRIGVCKGI
Sbjct: 265 PTNVQLPG-MYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGI 323

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           FRTDNVP+EAV+++VDTFPGQSIDFFGALRARVYDDEVRKWV   G+E I  +L+NS +G
Sbjct: 324 FRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDG 383

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAF 149
           PPTF+QPKMT+EKL+EYG+MLVQEQENVKRVQLA+ YL EAALG AN DA+ TG F
Sbjct: 384 PPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  271 bits (692), Expect = 2e-72
 Identities = 134/177 (75%), Positives = 147/177 (83%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    E    P    GNDFSTLYAP IRDGRMEKFYWAPTREDRIGVC GI
Sbjct: 265 PTNVQLPG-MYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGI 323

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           FRTDNVP E VV++VD FPGQSIDFFGALRARVYDDEVRKWV   G+E I  +L+NS +G
Sbjct: 324 FRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDG 383

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFY 146
           PPTF+QPKMTIEKL+EYG+MLVQEQENVKRVQLADKYL EAALG AN DA+  G+F+
Sbjct: 384 PPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  271 bits (692), Expect = 2e-72
 Identities = 136/179 (75%), Positives = 147/179 (82%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    E    P    GNDFSTLYAP IRDGRMEKFYWAPTREDRIGVCKGI
Sbjct: 261 PTNVQLPG-MYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGI 319

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           FRTD + DE +V LVD FPGQSIDFFGALRARVYDDEVRK+V  +GVE I KRLVNSREG
Sbjct: 320 FRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREG 379

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 140
           PP F+QP+MT EKLMEYG+MLV EQENVKRVQLA+ YLS+AALG AN DA+  G FYGK
Sbjct: 380 PPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGK 438

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  270 bits (689), Expect = 4e-72
 Identities = 130/179 (72%), Positives = 149/179 (83%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    +    P    GNDFSTLYAP IRDGRMEKFYWAPTREDRIGVC GI
Sbjct: 259 PTNVQLPG-MYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGI 317

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           F+TD VP E VV+LVD FPGQSIDFFGALRARVY DEVRKWV  +GV+N+ K+LVNS++G
Sbjct: 318 FKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDG 377

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 140
           PP F+QP+MT++KLMEYG+MLVQEQENVKRVQLAD+Y+S AALG AN DA+  G F+GK
Sbjct: 378 PPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGK 436

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  269 bits (688), Expect = 5e-72
 Identities = 129/177 (72%), Positives = 151/177 (85%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    +    P    GNDFSTLYAP IRDGRMEKFYWAPTREDRIGVCKGI
Sbjct: 265 PTNVQLPG-MYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGI 323

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           FRTD VP++ +V LVD  PGQSIDFFGALRARVYDDEVRKW+  +GV+++ K+LVNS+EG
Sbjct: 324 FRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEG 383

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFY 146
           PPTFDQPKMT++KL+ Y  MLVQEQENVKRVQLAD+YL+EAALG AN+DA+K+G+F+
Sbjct: 384 PPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  239 bits (610), Expect = 6e-63
 Identities = 117/153 (76%), Positives = 128/153 (83%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG +    E P  P    GNDFSTLYAP IRDGRM+KFYWAPTREDRIG+C GI
Sbjct: 258 PTNVQLPG-MYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGI 316

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           FRTD VP E +V+LVDTFPGQSIDFFGALRARVYDDEVRKW   +GVE I + LVNS+E 
Sbjct: 317 FRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKES 376

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQL 218
           PPTFDQPKMTIEKL+EYG+MLV EQENVKRV+L
Sbjct: 377 PPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  201 bits (511), Expect = 2e-51
 Identities = 105/163 (64%), Positives = 120/163 (73%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PTNVQLPG V +  E P  P    GNDFSTLYAP IRDGRMEK+YW PTREDRIGVC GI
Sbjct: 234 PTNVQLPG-VYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGI 292

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           F+ DNV    V  LVDTFPGQSIDFFGALRARVYDD VR+W+ + GV+ I ++LVN+R+ 
Sbjct: 293 FQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ- 351

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAAL 188
                +  M +  L++YG  LV EQENVKRVQLAD YLS A L
Sbjct: 352 KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  167 bits (424), Expect = 2e-41
 Identities = 79/157 (50%), Positives = 108/157 (68%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PT+VQLPG           P    GNDFSTLYAP IRDGRMEKFYW P R++++G+  GI
Sbjct: 134 PTDVQLPGSYDST-PLRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGGI 192

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           F  D +    V +LVD+FP QSIDFF ALR+R+YD+++R ++ ++G EN+S R+VNS EG
Sbjct: 193 FAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEG 252

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKY 206
           PP F +P  T+  L+E  + +V EQ+ ++  QL D+Y
Sbjct: 253 PPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  164 bits (414), Expect = 3e-40
 Identities = 79/157 (50%), Positives = 106/157 (67%)
 Frame = -1

Query: 676 PTNVQLPGDVQQGGEPPACPSSSPGNDFSTLYAPXIRDGRMEKFYWAPTREDRIGVCKGI 497
           PT+VQLPG           P    GNDFSTLYAP IRDGRMEKFYW P R+D++G+  GI
Sbjct: 134 PTDVQLPGSYDSN-PIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGGI 192

Query: 496 FRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREG 317
           F  D +    + +LVDTFP QSIDFF ALR+R+YD ++R ++ ++G E IS R+VNS E 
Sbjct: 193 FAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEA 252

Query: 316 PPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKY 206
           PP F +P  ++  L+E G++++ EQ+ V   QL D+Y
Sbjct: 253 PPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 30/60 (50%), Positives = 31/60 (51%)
 Frame = -1

Query: 457 LVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEK 278
           LVDTFPGQSIDFFGAL                            REGPPTF+QP MTIEK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell|
           protein 0)
          Length = 532

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = -3

Query: 344 QAPRQLQGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 201
           QAPRQ     A  RP         G RP A PG   R++   RR+ P+
Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296

>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0|
          Length = 532

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = -3

Query: 344 QAPRQLQGGAAHVRPAQDDHREAHGVRPHAGPGAGERQACAARRQVPQ 201
           QAPRQ     A  RP         G RP A PG   R++   RR+ P+
Sbjct: 250 QAPRQEDSRPARARPGPPTRGRRRGRRP-AAPGPASRRSARLRRRQPR 296

>IF2_TROWT (Q83GT8) Translation initiation factor IF-2|
          Length = 803

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 22/72 (30%), Positives = 26/72 (36%)
 Frame = -3

Query: 668 RAAPGGCTTRRRTPGVPIIVTGQRLLDAVRSXDP*RAHGEVLLGAHPRGPHRRVQGHLPH 489
           R  P G       P  P    GQ       +  P +   E      P   HRRV   LP 
Sbjct: 100 RGVPSGAPRPGNNPYAPRQGMGQLATPGPATKRPVKFKAEG--DKKPASTHRRVPAPLPQ 157

Query: 488 RQRPGRGRGEAG 453
           ++ P RGRG  G
Sbjct: 158 KRTPLRGRGAPG 169

>IF2_TROW8 (Q83HG7) Translation initiation factor IF-2|
          Length = 803

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 22/72 (30%), Positives = 26/72 (36%)
 Frame = -3

Query: 668 RAAPGGCTTRRRTPGVPIIVTGQRLLDAVRSXDP*RAHGEVLLGAHPRGPHRRVQGHLPH 489
           R  P G       P  P    GQ       +  P +   E      P   HRRV   LP 
Sbjct: 100 RGVPSGAPRPGNNPYAPRQGMGQLATPGPATKRPVKFKAEG--DKKPASTHRRVPAPLPQ 157

Query: 488 RQRPGRGRGEAG 453
           ++ P RGRG  G
Sbjct: 158 KRTPLRGRGAPG 169

>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 940

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
 Frame = -3

Query: 503 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 324
           GH PH + PG G G  GGH P                                + P    
Sbjct: 812 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 839

Query: 323 GGAAHVRPAQ-DDHREAHGVRPHAGPG 246
           GG+   RP +   H   HG RPH  PG
Sbjct: 840 GGSGGHRPHEGPGHGGPHGHRPHDVPG 866

>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 940

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
 Frame = -3

Query: 503 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 324
           GH PH + PG G G  GGH P                                + P    
Sbjct: 813 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 840

Query: 323 GGAAHVRPAQDD-HREAHGVRPHAGPG 246
           GG+   RP +   H   HG RPH  PG
Sbjct: 841 GGSGGHRPHEGPGHGGPHGHRPHDVPG 867



 Score = 30.4 bits (67), Expect = 5.2
 Identities = 30/117 (25%), Positives = 36/117 (30%), Gaps = 3/117 (2%)
 Frame = -3

Query: 503  GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 324
            GH PH + PG G G + GH P                              H      + 
Sbjct: 751  GHRPH-EGPGGGMGNSSGHRPHEGPGSGMGSGHRPHEGPGSSMGGGGGHRPHEGPGGGIS 809

Query: 323  GGAAHVRPAQDDHR---EAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHE 162
            GG+ H RP +          G RPH GPG G        R     G   P   R H+
Sbjct: 810  GGSGH-RPHEGPGGGMGAGGGHRPHEGPG-GSMGGSGGHRPHEGPGHGGPHGHRPHD 864

>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (MHC class
           I region proline-rich protein CAT53) (FB19 protein)
           (PP1-binding protein of 114 kDa) (p99)
          Length = 940

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
 Frame = -3

Query: 503 GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 324
           GH PH + PG G G  GGH P                                + P    
Sbjct: 812 GHRPH-EGPGGGMGAGGGHRPH-------------------------------EGPGGSM 839

Query: 323 GGAAHVRPAQDD-HREAHGVRPHAGPG 246
           GG+   RP +   H   HG RPH  PG
Sbjct: 840 GGSGGHRPHEGPGHGGPHGHRPHDVPG 866



 Score = 29.6 bits (65), Expect = 8.8
 Identities = 30/117 (25%), Positives = 36/117 (30%), Gaps = 3/117 (2%)
 Frame = -3

Query: 503  GHLPHRQRPGRGRGEAGGHLPGAVHXXXXXXXXXXXXXXXXXXXXXXXXGEHLQAPRQLQ 324
            GH PH + PG G G + GH P                              H      + 
Sbjct: 750  GHRPH-EGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGIS 808

Query: 323  GGAAHVRPAQDDHR---EAHGVRPHAGPGAGERQACAARRQVPQRGGARPSQRRRHE 162
            GG+ H RP +          G RPH GPG G        R     G   P   R H+
Sbjct: 809  GGSGH-RPHEGPGGGMGAGGGHRPHEGPG-GSMGGSGGHRPHEGPGHGGPHGHRPHD 863

>TILS_GLOVI (Q7NNL0) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 325

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 641 RRRTPGVPIIVTGQRLLDAVRSXDP*RAHGEVLLGAHP-RGPHRRVQGHLPHRQRPGRGR 465
           RR  P + ++  G  LL AV          ++L+   P RG H  V GHL HR RPG  R
Sbjct: 15  RRLRPALGLLPPGSGLLVAVSGGQDSLCLLKLLVDLAPERGLHLHV-GHLDHRWRPGSER 73

>PARD3_HUMAN (Q8TEW0) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (CTCL tumor antigen se2-5) (PAR3-alpha)
          Length = 1356

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 664 QLPGDVQQGGEPPACPSSSPGNDFST 587
           +LP      G+PP+ P+S+P N FST
Sbjct: 420 RLPHSAHPSGKPPSAPASAPQNVFST 445

>ABL_DROME (P00522) Tyrosine-protein kinase Abl (EC 2.7.10.2) (Abelson|
           protein) (D-ash)
          Length = 1620

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -2

Query: 444 SRGSPSTSSARCGHGCTTTRCASGSARSA 358
           S  +PSTS    G G TTT  ASG A S+
Sbjct: 647 SSSAPSTSGVATGGGATTTTAASGCASSS 675


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,292,348
Number of Sequences: 219361
Number of extensions: 1883404
Number of successful extensions: 6804
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6749
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)