| Clone Name | rbaal37o04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Y860_RICPR (P41078) Hypothetical protein RP860 | 30 | 2.5 | 2 | EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa en... | 28 | 5.5 |
|---|
>Y860_RICPR (P41078) Hypothetical protein RP860| Length = 204 Score = 29.6 bits (65), Expect = 2.5 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = -2 Query: 108 HIHICVFPFYFLLTPAIFVSLFIFIMS 28 HI +FP ++L P I ++L +FI++ Sbjct: 16 HISAIIFPMFYLFVPRIAIALLLFIIT 42
>EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa endomembrane| protein) (Pheromone alpha-factor transporter) (Acidic 24 kDa late endocytic intermediate component) Length = 667 Score = 28.5 bits (62), Expect = 5.5 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 13 TLTMNRHNKNEKGNKDSGSEEKIERKYTYMY 105 T +MN +K+E GN SG +E Y Y Y Sbjct: 47 TPSMNYQHKDEDGNNVSGDKENFLYSYDYYY 77 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.309 0.125 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,458,994 Number of Sequences: 219361 Number of extensions: 155889 Number of successful extensions: 513 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 502 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 513 length of database: 80,573,946 effective HSP length: 13 effective length of database: 77,722,253 effective search space used: 1865334072 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)