ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal37n21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY109993.1| Zea mays CL16286_1 mRNA sequence 444 e-121
2ref|XM_474223.1| Oryza sativa (japonica cultivar-group), predic... 373 e-100
3gb|BT018698.1| Zea mays clone EL01N0514C09.d mRNA sequence 248 2e-62
4emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4,... 224 3e-55
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 224 3e-55
6dbj|AK109706.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 3e-55
7gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 60 1e-05
8ref|NM_209318.1| Eremothecium gossypii ADL131Cp (ADL131C), mRNA 60 1e-05
9emb|CR714699.2|CNS0GEEV Tetraodon nigroviridis full-length cDNA 54 6e-04
10emb|CR709429.2|CNS0GACH Tetraodon nigroviridis full-length cDNA 54 6e-04
11emb|CR707621.2|CNS0G8Y9 Tetraodon nigroviridis full-length cDNA 54 6e-04
12emb|CR705208.2|CNS0G738 Tetraodon nigroviridis full-length cDNA 54 6e-04
13emb|BX045529.1|CNS097AL Single read from an extremity of a full-... 50 0.009
14ref|XM_316402.2| Anopheles gambiae str. PEST ENSANGP00000013047 ... 50 0.009
15ref|XM_588915.2| PREDICTED: Bos taurus similar to U3 small nucle... 48 0.036
16ref|XM_613128.2| PREDICTED: Bos taurus similar to U3 small nucle... 48 0.036
17gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence 48 0.036
18ref|XM_544781.2| PREDICTED: Canis familiaris similar to U3 small... 48 0.036
19ref|XM_848283.1| PREDICTED: Canis familiaris similar to U3 small... 48 0.036
20emb|BX045528.1|CNS097AK Single read from an extremity of a full-... 48 0.036
21dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 48 0.036
22gb|BC102331.1| Bos taurus cDNA clone MGC:127563 IMAGE:7951114, c... 48 0.036
23ref|NM_133976.1| Mus musculus IMP3, U3 small nucleolar ribonucle... 46 0.14
24ref|XM_658683.1| Aspergillus nidulans FGSC A4 hypothetical prote... 46 0.14
25gb|AC117663.13| Mus musculus chromosome 5, clone RP23-354E8, com... 46 0.14
26gb|AC124348.5| Mus musculus BAC clone RP24-462O9 from chromosome... 46 0.14
27ref|XR_004560.1| PREDICTED: Mus musculus RIKEN cDNA 4933427G23 g... 46 0.14
28ref|XR_002344.1| PREDICTED: Mus musculus RIKEN cDNA 4933427G23 g... 46 0.14
29ref|XR_005167.1| PREDICTED: Mus musculus RIKEN cDNA 4933427G23 g... 46 0.14
30ref|XM_753393.1| Ustilago maydis 521 hypothetical protein (UM023... 46 0.14
31gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome... 46 0.14
32gb|BC009145.1| Mus musculus IMP3, U3 small nucleolar ribonucleop... 46 0.14
33dbj|AK004456.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 46 0.14
34dbj|AK030236.1| Mus musculus adult male testis cDNA, RIKEN full-... 46 0.14
35emb|AJ309378.1|ABE309378 Atropa belladonna partial mRNA for puta... 46 0.14
36gb|BC074666.1| Xenopus tropicalis MGC69249 protein, mRNA (cDNA c... 44 0.57
37ref|NM_001004848.1| Xenopus tropicalis MGC69249 protein (MGC6924... 44 0.57
38dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 42 2.2
39gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome 42 2.2
40ref|XM_638666.1| Dictyostelium discoideum hypothetical protein (... 40 8.8
41ref|XM_510683.1| PREDICTED: Pan troglodytes similar to U3 snoRNP... 40 8.8
42ref|XM_368672.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 8.8
43ref|XM_420575.1| PREDICTED: Gallus gallus similar to CL3AA (LOC4... 40 8.8
44gb|AE006109.1| Pasteurella multocida subsp. multocida str. Pm70 ... 40 8.8
45gb|BC020557.2| Homo sapiens chromosome 15 open reading frame 12,... 40 8.8
46ref|NM_018285.2| Homo sapiens IMP3, U3 small nucleolar ribonucle... 40 8.8
47emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 8.8
48emb|AL445646.11| Human DNA sequence from clone RP11-217F16 on ch... 40 8.8
49gb|BC011745.2| Homo sapiens IMP3, U3 small nucleolar ribonucleop... 40 8.8
50emb|AL136913.1|HSM801879 Homo sapiens mRNA; cDNA DKFZp586L0118 (... 40 8.8
51gb|BC006487.1| Homo sapiens IMP3, U3 small nucleolar ribonucleop... 40 8.8
52gb|DQ370059.1| Actinobacillus pleuropneumoniae in vivo induced p... 40 8.8
53emb|CR604682.1| full-length cDNA clone CS0DC006YF03 of Neuroblas... 40 8.8
54emb|CR601431.1| full-length cDNA clone CS0CAP001YA10 of Thymus o... 40 8.8
55dbj|AK057531.1| Homo sapiens cDNA FLJ32969 fis, clone TESTI20088... 40 8.8
56emb|CR599893.1| full-length cDNA clone CS0DB007YJ06 of Neuroblas... 40 8.8
57emb|CR590019.1| full-length cDNA clone CS0DI023YL18 of Placenta ... 40 8.8
58dbj|AK001830.1| Homo sapiens cDNA FLJ10968 fis, clone PLACE10008... 40 8.8
59gb|AC073917.19| Homo sapiens 12q BAC RP11-415D21 (Roswell Park C... 40 8.8
60gb|AY050497.1| Homo sapiens BRMS2 mRNA, complete cds 40 8.8
61gb|AC105020.18| Homo sapiens chromosome 15, clone CTD-2026K11, c... 40 8.8
62gb|AC073532.18|AC073532 Homo sapiens 12 BAC RP11-150F20 (Roswell... 40 8.8
63gb|BC049039.1| Danio rerio zgc:56526, mRNA (cDNA clone MGC:56526... 40 8.8
64dbj|AK223121.1| Homo sapiens mRNA for U3 snoRNP protein 3 homolo... 40 8.8
65gb|AC153377.5| Mus musculus 6 BAC RP23-380O16 (Roswell Park Canc... 40 8.8
66gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175... 40 8.8
67gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, comp... 40 8.8
68ref|XM_236276.3| PREDICTED: Rattus norvegicus similar to RIKEN c... 40 8.8
69ref|NM_200267.1| Danio rerio zgc:56526 (zgc:56526), mRNA 40 8.8
70gb|AC121766.2| Homo sapiens chromosome 3 clone RP11-245G23, comp... 40 8.8
71gb|AC157893.2| Medicago truncatula chromosome 7 BAC clone mth2-7... 40 8.8
72emb|CR956623.8| Zebrafish DNA sequence from clone CH211-112D19 i... 40 8.8
73emb|BX571944.15| Zebrafish DNA sequence from clone RP71-84D1 in ... 40 8.8
74dbj|AP006148.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.8
75gb|DQ163407.1| Candidatus Hamiltonella defensa clone P080074 gen... 40 8.8 
>gb|AY109993.1| Zea mays CL16286_1 mRNA sequence
          Length = 967

 Score =  444 bits (224), Expect = e-121
 Identities = 395/452 (87%)
 Strand = Plus / Minus

                                                                       
Query: 196 catggcatcataatcatccaatgcaccattatactccatgatctttttcttgatcttcga 255
           |||||||||||||||||| |||||| |||| |||||||||| |||  |||||||||| ||
Sbjct: 729 catggcatcataatcatctaatgcatcattgtactccatgaccttcctcttgatctttga 670

                                                                       
Query: 256 ggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaaggctggatcggt 315
           ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||
Sbjct: 669 ggaatccacccaggtgatgaagtcctccatgtttctggtcacaagaaaggctgggtccgt 610

                                                                       
Query: 316 gaccgtctctgggcctacacgcacatgtccctgttcaatgtaggtgatagcctctttaag 375
           ||| |  ||||| || ||||||||||| |||||||| ||||| || | |||||| |||||
Sbjct: 609 gactgcatctggaccgacacgcacatgcccctgttcgatgtacgtcacagcctccttaag 550

                                                                       
Query: 376 gtgttcagcaaacttgagcttcaccataattgttgcaagtctccgcctggcgaaagcgct 435
           ||| || |||||||||||||||||||||| |||||||||||||||||||  ||| |||||
Sbjct: 549 gtgctctgcaaacttgagcttcaccataactgttgcaagtctccgcctgcagaaggcgct 490

                                                                       
Query: 436 cactgaaagtctctcgcatttaaccaagctcttctttgttggaattacacccatattata 495
           |||||||||| |||| || || | ||||||||  ||||||| ||||||||||||||||||
Sbjct: 489 cactgaaagtttctcacactttaacaagctctcttttgttgaaattacacccatattata 430

                                                                       
Query: 496 cagcttatcgagcagcatgcctgtcatctcgattctgaaagggtccctgggatccatctg 555
           |||||||||||| | || | ||||||||| ||||||||||||||| || || ||||||||
Sbjct: 429 cagcttatcgagaatcaagtctgtcatctggattctgaaagggtctcttgggtccatctg 370

                                                                       
Query: 556 ctttatgatgttcacgagcttctgcgacatcaggcaaatcccgttgtacttcttgtagtc 615
            ||||||||||| |||||||| |||  ||| | ||| ||||| |||||||||||||||||
Sbjct: 369 gtttatgatgttaacgagcttttgcaccattaagcatatcccattgtacttcttgtagtc 310

                                           
Query: 616 gtccctgtcgacgaggctgtagcgctgcgtga 647
           |||||| || ||||||| ||||||||| ||||
Sbjct: 309 gtccctctccacgaggcggtagcgctgtgtga 278
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>ref|XM_474223.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 549

 Score =  373 bits (188), Expect = e-100
 Identities = 383/448 (85%)
 Strand = Plus / Minus

                                                                       
Query: 200 gcatcataatcatccaatgcaccattatactccatgatctttttcttgatcttcgaggaa 259
           |||||| |||| |||||| ||||||||||||||  || |||| |||||||||| ||||| 
Sbjct: 539 gcatcaaaatcgtccaattcaccattatactcctggacctttctcttgatctttgaggag 480

                                                                       
Query: 260 tccacccaggtgatgaagtcctccatgttcctggtcacaaggaaggctggatcggtgacc 319
           || |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 479 tcaacccaggtgatgaaatcctccatgttcctggttacaagaaaggctggatcggtgact 420

                                                                       
Query: 320 gtctctgggcctacacgcacatgtccctgttcaatgtaggtgatagcctctttaaggtgt 379
           ||||||||||||||||||||||| ||||| |  ||||| || |  |||||||||||||| 
Sbjct: 419 gtctctgggcctacacgcacatgaccctgctgtatgtatgtcacggcctctttaaggtgc 360

                                                                       
Query: 380 tcagcaaacttgagcttcaccataattgttgcaagtctccgcctggcgaaagcgctcact 439
           || || ||||||||||||||||| | ||||||||| |||||||||   || | |||||||
Sbjct: 359 tccgcgaacttgagcttcaccatgactgttgcaagcctccgcctgcaaaaggagctcact 300

                                                                       
Query: 440 gaaagtctctcgcatttaaccaagctcttctttgttggaattacacccatattatacagc 499
           |||||| | || ||| | | || |||||| |||||||||||||||||||| || ||||||
Sbjct: 299 gaaagtttttcacatgttaacaggctcttttttgttggaattacacccatgttgtacagc 240

                                                                       
Query: 500 ttatcgagcagcatgcctgtcatctcgattctgaaagggtccctgggatccatctgcttt 559
           |||||||||| |||| ||||||||||   |||| ||||||| || || ||||| ||||||
Sbjct: 239 ttatcgagcaacatgtctgtcatctccgctctgtaagggtctctcgggtccatttgcttt 180

                                                                       
Query: 560 atgatgttcacgagcttctgcgacatcaggcaaatcccgttgtacttcttgtagtcgtcc 619
           || ||||| |||||||| |||  ||||||||| || || |||||||||||||||||||| 
Sbjct: 179 ataatgttgacgagcttttgcaccatcaggcatatgccattgtacttcttgtagtcgtct 120

                                       
Query: 620 ctgtcgacgaggctgtagcgctgcgtga 647
           || |||||||||  ||||||||||||||
Sbjct: 119 ctctcgacgaggaggtagcgctgcgtga 92
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>gb|BT018698.1| Zea mays clone EL01N0514C09.d mRNA sequence
          Length = 1736

 Score =  248 bits (125), Expect = 2e-62
 Identities = 203/229 (88%)
 Strand = Plus / Minus

                                                                        
Query: 196  catggcatcataatcatccaatgcaccattatactccatgatctttttcttgatcttcga 255
            |||||||||||||||||| |||||| |||| |||||||||| |||  |||||||||| ||
Sbjct: 1494 catggcatcataatcatctaatgcatcattgtactccatgaccttcctcttgatctttga 1435

                                                                        
Query: 256  ggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaaggctggatcggt 315
            ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||
Sbjct: 1434 ggaatccacccaggtgatgaagtcctccatgtttctggtcacaagaaaggctgggtccgt 1375

                                                                        
Query: 316  gaccgtctctgggcctacacgcacatgtccctgttcaatgtaggtgatagcctctttaag 375
            ||| |  ||||| || |||||||| || |||||||| ||||| || | |||||| |||||
Sbjct: 1374 gactgcatctggaccgacacgcacgtgcccctgttcgatgtacgtcacagcctccttaag 1315

                                                             
Query: 376  gtgttcagcaaacttgagcttcaccataattgttgcaagtctccgcctg 424
            ||| || |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1314 gtgctctgcaaacttgagcttcaccataactgttgcaagtctccgcctg 1266



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                        
Query: 431  gcgctcactgaaagtctctcgcatttaaccaagctcttctttgttggaattacacccata 490
            ||||||||||||||| |||| || || | ||||||||  ||||||| |||||||||||||
Sbjct: 1014 gcgctcactgaaagtttctcacactttaacaagctctcttttgttgaaattacacccata 955

                  
Query: 491  ttatac 496
            ||||||
Sbjct: 954  ttatac 949
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>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01,
             complete sequence
          Length = 163448

 Score =  224 bits (113), Expect = 3e-55
 Identities = 197/225 (87%)
 Strand = Plus / Plus

                                                                         
Query: 200   gcatcataatcatccaatgcaccattatactccatgatctttttcttgatcttcgaggaa 259
             |||||| |||| |||||| ||||||||||||||  || |||| |||||||||| ||||| 
Sbjct: 30303 gcatcaaaatcgtccaattcaccattatactcctggacctttctcttgatctttgaggag 30362

                                                                         
Query: 260   tccacccaggtgatgaagtcctccatgttcctggtcacaaggaaggctggatcggtgacc 319
             || |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 30363 tcaacccaggtgatgaaatcctccatgttcctggttacaagaaaggctggatcggtgact 30422

                                                                         
Query: 320   gtctctgggcctacacgcacatgtccctgttcaatgtaggtgatagcctctttaaggtgt 379
             ||||||||||||||||||||||| ||||| |  ||||| || |  |||||||||||||| 
Sbjct: 30423 gtctctgggcctacacgcacatgaccctgctgtatgtatgtcacggcctctttaaggtgc 30482

                                                          
Query: 380   tcagcaaacttgagcttcaccataattgttgcaagtctccgcctg 424
             || || ||||||||||||||||| | ||||||||| |||||||||
Sbjct: 30483 tccgcgaacttgagcttcaccatgactgttgcaagcctccgcctg 30527



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 93/111 (83%)
 Strand = Plus / Plus

                                                                         
Query: 494   tacagcttatcgagcagcatgcctgtcatctcgattctgaaagggtccctgggatccatc 553
             |||||||||||||||| |||| ||||||||||   |||| ||||||| || || ||||| 
Sbjct: 31532 tacagcttatcgagcaacatgtctgtcatctccgctctgtaagggtctctcgggtccatt 31591

                                                                
Query: 554   tgctttatgatgttcacgagcttctgcgacatcaggcaaatcccgttgtac 604
             |||||||| ||||| |||||||| |||  ||||||||| || || ||||||
Sbjct: 31592 tgctttataatgttgacgagcttttgcaccatcaggcatatgccattgtac 31642



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 601   gtacttcttgtagtcgtccctgtcgacgaggctgtagcgctgcgtga 647
             |||||||||||||||||| || |||||||||  ||||||||||||||
Sbjct: 31790 gtacttcttgtagtcgtctctctcgacgaggaggtagcgctgcgtga 31836



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                      
Query: 433   gctcactgaaagtctctcgcatttaaccaagctcttctttgttggaattacacccat 489
             ||||||||||||| | || ||| | | || |||||| ||||||||||||||||||||
Sbjct: 30825 gctcactgaaagtttttcacatgttaacaggctcttttttgttggaattacacccat 30881
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  224 bits (113), Expect = 3e-55
 Identities = 197/225 (87%)
 Strand = Plus / Plus

                                                                            
Query: 200      gcatcataatcatccaatgcaccattatactccatgatctttttcttgatcttcgaggaa 259
                |||||| |||| |||||| ||||||||||||||  || |||| |||||||||| ||||| 
Sbjct: 33818404 gcatcaaaatcgtccaattcaccattatactcctggacctttctcttgatctttgaggag 33818463

                                                                            
Query: 260      tccacccaggtgatgaagtcctccatgttcctggtcacaaggaaggctggatcggtgacc 319
                || |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 33818464 tcaacccaggtgatgaaatcctccatgttcctggttacaagaaaggctggatcggtgact 33818523

                                                                            
Query: 320      gtctctgggcctacacgcacatgtccctgttcaatgtaggtgatagcctctttaaggtgt 379
                ||||||||||||||||||||||| ||||| |  ||||| || |  |||||||||||||| 
Sbjct: 33818524 gtctctgggcctacacgcacatgaccctgctgtatgtatgtcacggcctctttaaggtgc 33818583

                                                             
Query: 380      tcagcaaacttgagcttcaccataattgttgcaagtctccgcctg 424
                || || ||||||||||||||||| | ||||||||| |||||||||
Sbjct: 33818584 tccgcgaacttgagcttcaccatgactgttgcaagcctccgcctg 33818628



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 93/111 (83%)
 Strand = Plus / Plus

                                                                            
Query: 494      tacagcttatcgagcagcatgcctgtcatctcgattctgaaagggtccctgggatccatc 553
                |||||||||||||||| |||| ||||||||||   |||| ||||||| || || ||||| 
Sbjct: 33819633 tacagcttatcgagcaacatgtctgtcatctccgctctgtaagggtctctcgggtccatt 33819692

                                                                   
Query: 554      tgctttatgatgttcacgagcttctgcgacatcaggcaaatcccgttgtac 604
                |||||||| ||||| |||||||| |||  ||||||||| || || ||||||
Sbjct: 33819693 tgctttataatgttgacgagcttttgcaccatcaggcatatgccattgtac 33819743



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                               
Query: 601      gtacttcttgtagtcgtccctgtcgacgaggctgtagcgctgcgtga 647
                |||||||||||||||||| || |||||||||  ||||||||||||||
Sbjct: 33819891 gtacttcttgtagtcgtctctctcgacgaggaggtagcgctgcgtga 33819937



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                         
Query: 433      gctcactgaaagtctctcgcatttaaccaagctcttctttgttggaattacacccat 489
                ||||||||||||| | || ||| | | || |||||| ||||||||||||||||||||
Sbjct: 33818926 gctcactgaaagtttttcacatgttaacaggctcttttttgttggaattacacccat 33818982
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>dbj|AK109706.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-G05, full
            insert sequence
          Length = 1933

 Score =  224 bits (113), Expect = 3e-55
 Identities = 197/225 (87%)
 Strand = Plus / Minus

                                                                        
Query: 200  gcatcataatcatccaatgcaccattatactccatgatctttttcttgatcttcgaggaa 259
            |||||| |||| |||||| ||||||||||||||  || |||| |||||||||| ||||| 
Sbjct: 1723 gcatcaaaatcgtccaattcaccattatactcctggacctttctcttgatctttgaggag 1664

                                                                        
Query: 260  tccacccaggtgatgaagtcctccatgttcctggtcacaaggaaggctggatcggtgacc 319
            || |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct: 1663 tcaacccaggtgatgaaatcctccatgttcctggttacaagaaaggctggatcggtgact 1604

                                                                        
Query: 320  gtctctgggcctacacgcacatgtccctgttcaatgtaggtgatagcctctttaaggtgt 379
            ||||||||||||||||||||||| ||||| |  ||||| || |  |||||||||||||| 
Sbjct: 1603 gtctctgggcctacacgcacatgaccctgctgtatgtatgtcacggcctctttaaggtgc 1544

                                                         
Query: 380  tcagcaaacttgagcttcaccataattgttgcaagtctccgcctg 424
            || || ||||||||||||||||| | ||||||||| |||||||||
Sbjct: 1543 tccgcgaacttgagcttcaccatgactgttgcaagcctccgcctg 1499



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                       
Query: 494 tacagcttatcgagcagcatgcctgtcatctcgattctgaaagggtccctgggatccatc 553
           |||||||||||||||| |||| ||||||||||   |||| ||||||| || || ||||| 
Sbjct: 494 tacagcttatcgagcaacatgtctgtcatctccgctctgtaagggtctctcgggtccatt 435

                                                              
Query: 554 tgctttatgatgttcacgagcttctgcgacatcaggcaaatcccgttgtac 604
           |||||||| ||||| |||||||| |||  ||||||||| || || ||||||
Sbjct: 434 tgctttataatgttgacgagcttttgcaccatcaggcatatgccattgtac 384



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 601 gtacttcttgtagtcgtccctgtcgacgaggctgtagcgctgcgtga 647
           |||||||||||||||||| || |||||||||  ||||||||||||||
Sbjct: 236 gtacttcttgtagtcgtctctctcgacgaggaggtagcgctgcgtga 190



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 433  gctcactgaaagtctctcgcatttaaccaagctcttctttgttggaattacacccat 489
            ||||||||||||| | || ||| | | || |||||| ||||||||||||||||||||
Sbjct: 1201 gctcactgaaagtttttcacatgttaacaggctcttttttgttggaattacacccat 1145
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>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
              complete sequence
          Length = 1466886

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                
Query: 276    agtcctccatgttcctggtcacaaggaaggctgg 309
              |||||||||||||||||||||||||| |||||||
Sbjct: 461409 agtcctccatgttcctggtcacaaggtaggctgg 461442
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>ref|NM_209318.1| Eremothecium gossypii ADL131Cp (ADL131C), mRNA
          Length = 552

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 276 agtcctccatgttcctggtcacaaggaaggctgg 309
           |||||||||||||||||||||||||| |||||||
Sbjct: 469 agtcctccatgttcctggtcacaaggtaggctgg 436
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>emb|CR714699.2|CNS0GEEV Tetraodon nigroviridis full-length cDNA
          Length = 817

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                       
Query: 245 ttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaag 304
           |||||||| || |||||||||||||| |  || |||||||| || ||||| || || || 
Sbjct: 453 ttgatcttggaagaatccacccaggtaacaaaatcctccatatttctggtgactagaaac 394

                                                                      
Query: 305 gctggatcggtgaccgtctctgggcctacacgcacatgtccctgttcaatgtaggtgat 363
           ||||| || |||||  | |||||||| || |||||||| ||||| || ||| |||||||
Sbjct: 393 gctgggtctgtgacaatttctgggccaacgcgcacatggccctgctcgatgaaggtgat 335
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>emb|CR709429.2|CNS0GACH Tetraodon nigroviridis full-length cDNA
          Length = 911

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                       
Query: 245 ttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaag 304
           |||||||| || |||||||||||||| |  || |||||||| || ||||| || || || 
Sbjct: 537 ttgatcttggaagaatccacccaggtaacaaaatcctccatatttctggtgactagaaac 478

                                                                      
Query: 305 gctggatcggtgaccgtctctgggcctacacgcacatgtccctgttcaatgtaggtgat 363
           ||||| || |||||  | |||||||| || |||||||| ||||| || ||| |||||||
Sbjct: 477 gctgggtctgtgacaatttctgggccaacgcgcacatggccctgctcgatgaaggtgat 419
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>emb|CR707621.2|CNS0G8Y9 Tetraodon nigroviridis full-length cDNA
          Length = 947

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                       
Query: 245 ttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaag 304
           |||||||| || |||||||||||||| |  || |||||||| || ||||| || || || 
Sbjct: 580 ttgatcttggaagaatccacccaggtaacaaaatcctccatatttctggtgactagaaac 521

                                                                      
Query: 305 gctggatcggtgaccgtctctgggcctacacgcacatgtccctgttcaatgtaggtgat 363
           ||||| || |||||  | |||||||| || |||||||| ||||| || ||| |||||||
Sbjct: 520 gctgggtctgtgacaatttctgggccaacgcgcacatggccctgctcgatgaaggtgat 462
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>emb|CR705208.2|CNS0G738 Tetraodon nigroviridis full-length cDNA
          Length = 897

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                       
Query: 245 ttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaag 304
           |||||||| || |||||||||||||| |  || |||||||| || ||||| || || || 
Sbjct: 533 ttgatcttggaagaatccacccaggtaacaaaatcctccatatttctggtgactagaaac 474

                                                                      
Query: 305 gctggatcggtgaccgtctctgggcctacacgcacatgtccctgttcaatgtaggtgat 363
           ||||| || |||||  | |||||||| || |||||||| ||||| || ||| |||||||
Sbjct: 473 gctgggtctgtgacaatttctgggccaacgcgcacatggccctgctcgatgaaggtgat 415
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>emb|BX045529.1|CNS097AL Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC19DA01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 806

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 260 tccacccaggtgatgaagtcctcca 284
           |||||||||||||||||||||||||
Sbjct: 88  tccacccaggtgatgaagtcctcca 112
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>ref|XM_316402.2| Anopheles gambiae str. PEST ENSANGP00000013047
           (ENSANGG00000010558), mRNA
          Length = 748

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 260 tccacccaggtgatgaagtcctcca 284
           |||||||||||||||||||||||||
Sbjct: 665 tccacccaggtgatgaagtcctcca 641
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>ref|XM_588915.2| PREDICTED: Bos taurus similar to U3 small nucleolar
           ribonucleoprotein protein IMP3 (U3 snoRNP protein IMP3)
           (BRMS2) (LOC511560), mRNA
          Length = 1074

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || || ||||||||||  |||||||||||| | |  || ||||||||
Sbjct: 537 cttgatcttggacgagtcaacccaggtgacaaagtcctccatgcttcgcgtgacaaggaa 478

                           
Query: 304 ggctggatcggtgacc 319
           ||| || |||||||||
Sbjct: 477 ggcggggtcggtgacc 462
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>ref|XM_613128.2| PREDICTED: Bos taurus similar to U3 small nucleolar
           ribonucleoprotein protein IMP3 (U3 snoRNP protein IMP3)
           (BRMS2) (LOC533655), mRNA
          Length = 1125

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || || ||||||||||  |||||||||||| | |  || ||||||||
Sbjct: 537 cttgatcttggacgagtcaacccaggtgacaaagtcctccatgcttcgcgtgacaaggaa 478

                           
Query: 304 ggctggatcggtgacc 319
           ||| || |||||||||
Sbjct: 477 ggcggggtcggtgacc 462
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>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 243   tcttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcc 290
             ||||||||||||| ||||| ||||| |||||||| || ||||| ||||
Sbjct: 40099 tcttgatcttcgacgaatcgacccatgtgatgaaatcttccatattcc 40052
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>ref|XM_544781.2| PREDICTED: Canis familiaris similar to U3 small nucleolar
           ribonucleoprotein protein IMP3 (U3 snoRNP protein IMP3)
           (BRMS2) (LOC487656), mRNA
          Length = 900

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 260 tccacccaggtgatgaagtcctccatgttcctggtcacaaggaaggctggatcggtgacc 319
           ||||||||||||| ||||||||||||| | |  || || |||||||| || |||||||||
Sbjct: 605 tccacccaggtgacgaagtcctccatgctgcgcgtgacgaggaaggcggggtcggtgacc 546
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>ref|XM_848283.1| PREDICTED: Canis familiaris similar to U3 small nucleolar
            ribonucleoprotein protein IMP3 (U3 snoRNP protein IMP3)
            (BRMS2) (LOC482781), mRNA
          Length = 1512

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 260  tccacccaggtgatgaagtcctccatgttcctggtcacaaggaaggctggatcggtgacc 319
            ||||||||||||| ||||||||||||| | |  || || |||||||| || |||||||||
Sbjct: 1442 tccacccaggtgacgaagtcctccatgctgcgcgtgacgaggaaggcggggtcggtgacc 1383
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>emb|BX045528.1|CNS097AK Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC19DA01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 794

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 260 tccacccaggtgatgaagtcctcc 283
           ||||||||||||||||||||||||
Sbjct: 645 tccacccaggtgatgaagtcctcc 622
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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 332     acacgcacatgtccctgttcaatg 355
               ||||||||||||||||||||||||
Sbjct: 2234006 acacgcacatgtccctgttcaatg 2234029



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                      
Query: 259     atccacccaggtgatgaagtcctccatgttcctggtcac 297
               ||||||||| |||| ||| |||||||||||||| |||||
Sbjct: 2233933 atccacccaagtgacgaaatcctccatgttcctcgtcac 2233971
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>gb|BC102331.1| Bos taurus cDNA clone MGC:127563 IMAGE:7951114, complete cds
          Length = 1093

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || || ||||||||||  |||||||||||| | |  || ||||||||
Sbjct: 537 cttgatcttggacgagtcaacccaggtgacaaagtcctccatgcttcgcgtgacaaggaa 478

                           
Query: 304 ggctggatcggtgacc 319
           ||| || |||||||||
Sbjct: 477 ggcggggtcggtgacc 462
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>ref|NM_133976.1| Mus musculus IMP3, U3 small nucleolar ribonucleoprotein, homolog
           (yeast) (Imp3), mRNA
          Length = 918

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatg 286
           ||||||||| || || |||||||||||||  ||||||||||||
Sbjct: 511 cttgatcttggatgagtccacccaggtgacaaagtcctccatg 469
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>ref|XM_658683.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6171.2), mRNA
          Length = 567

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 256 ggaatccacccaggtgatgaagtcctccatgttcc 290
           |||||||||||| || | |||||||||||||||||
Sbjct: 504 ggaatccacccacgtcacgaagtcctccatgttcc 470
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>gb|AC117663.13| Mus musculus chromosome 5, clone RP23-354E8, complete sequence
          Length = 197426

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 244   cttgatcttcgaggaatccacccaggtgatgaagtcctccatg 286
             ||||||||| || |||||||||| |||||  ||||||||||||
Sbjct: 85228 cttgatcttggatgaatccaccccggtgacaaagtcctccatg 85186
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>gb|AC124348.5| Mus musculus BAC clone RP24-462O9 from chromosome 9, complete sequence
          Length = 187568

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 244   cttgatcttcgaggaatccacccaggtgatgaagtcctccatg 286
             ||||||||| || || |||||||||||||  ||||||||||||
Sbjct: 37069 cttgatcttggatgagtccacccaggtgacaaagtcctccatg 37027
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>ref|XR_004560.1| PREDICTED: Mus musculus RIKEN cDNA 4933427G23 gene (4933427G23Rik),
           misc RNA
          Length = 904

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatg 286
           ||||||||| || |||||||||| |||||  ||||||||||||
Sbjct: 522 cttgatcttggatgaatccaccccggtgacaaagtcctccatg 480
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>ref|XR_002344.1| PREDICTED: Mus musculus RIKEN cDNA 4933427G23 gene (4933427G23Rik),
           misc RNA
          Length = 904

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatg 286
           ||||||||| || |||||||||| |||||  ||||||||||||
Sbjct: 522 cttgatcttggatgaatccaccccggtgacaaagtcctccatg 480
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>ref|XR_005167.1| PREDICTED: Mus musculus RIKEN cDNA 4933427G23 gene (4933427G23Rik),
           misc RNA
          Length = 904

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatg 286
           ||||||||| || |||||||||| |||||  ||||||||||||
Sbjct: 522 cttgatcttggatgaatccaccccggtgacaaagtcctccatg 480
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>ref|XM_753393.1| Ustilago maydis 521 hypothetical protein (UM02339.1) partial mRNA
          Length = 753

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 259 atccacccaggtgatgaagtcctccatgttcctggtcac 297
           |||||||||||| |  ||||||||||||||||| |||||
Sbjct: 483 atccacccaggtaacaaagtcctccatgttcctagtcac 445
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>gb|AC126257.4| Mus musculus BAC clone RP24-247A8 from chromosome 9, complete sequence
          Length = 174764

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 244    cttgatcttcgaggaatccacccaggtgatgaagtcctccatg 286
              ||||||||| || || |||||||||||||  ||||||||||||
Sbjct: 153568 cttgatcttggatgagtccacccaggtgacaaagtcctccatg 153526
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>gb|BC009145.1| Mus musculus IMP3, U3 small nucleolar ribonucleoprotein, homolog
           (yeast), mRNA (cDNA clone MGC:6463 IMAGE:2631069),
           complete cds
          Length = 918

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatg 286
           ||||||||| || || |||||||||||||  ||||||||||||
Sbjct: 511 cttgatcttggatgagtccacccaggtgacaaagtcctccatg 469
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>dbj|AK004456.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1190002L16 product:Hypothetical
           protein (BRMS2) (Similar to mitochondrial ribosomal
           protein S4) (Chromosome 15 open reading frame 12)
           homolog [Homo sapiens], full insert sequence
          Length = 925

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatg 286
           ||||||||| || || |||||||||||||  ||||||||||||
Sbjct: 535 cttgatcttggatgagtccacccaggtgacaaagtcctccatg 493
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>dbj|AK030236.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4933427G23 product:HYPOTHETICAL 21.8 KDA
           PROTEIN (BRMS2) (SIMILAR TO MITOCHONDRIAL RIBOSOMAL
           PROTEIN S4) homolog [Homo sapiens], full insert sequence
          Length = 2516

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatg 286
           ||||||||| || |||||||||| |||||  ||||||||||||
Sbjct: 777 cttgatcttggatgaatccaccccggtgacaaagtcctccatg 735
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>emb|AJ309378.1|ABE309378 Atropa belladonna partial mRNA for putative ribosomal-like protein
          Length = 373

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 263 acccaggtgatgaagtcctccatgttcctggtcacaaggaaggctgg 309
           ||||| ||||||||||||||||| || || |||||||| || |||||
Sbjct: 106 acccaagtgatgaagtcctccatatttcttgtcacaagaaatgctgg 60
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>gb|BC074666.1| Xenopus tropicalis MGC69249 protein, mRNA (cDNA clone MGC:69249
           IMAGE:5308048), complete cds
          Length = 1391

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 242 ttcttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaagg 301
           ||||| ||||| ||||||||||||||||| |  || |||||||| || || || || |||
Sbjct: 664 ttcttaatcttggaggaatccacccaggtcacaaaatcctccatatttcttgtaaccagg 605

                         
Query: 302 aaggctggatcggt 315
           || ||||| |||||
Sbjct: 604 aaagctgggtcggt 591
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>ref|NM_001004848.1| Xenopus tropicalis MGC69249 protein (MGC69249), mRNA
          Length = 1391

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 242 ttcttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaagg 301
           ||||| ||||| ||||||||||||||||| |  || |||||||| || || || || |||
Sbjct: 664 ttcttaatcttggaggaatccacccaggtcacaaaatcctccatatttcttgtaaccagg 605

                         
Query: 302 aaggctggatcggt 315
           || ||||| |||||
Sbjct: 604 aaagctgggtcggt 591
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 417     tccgcctggcgaaagcgctca 437
               |||||||||||||||||||||
Sbjct: 1320115 tccgcctggcgaaagcgctca 1320095
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>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 75     caacagataactatcttaacatatt 99
              |||||||||||| ||||||||||||
Sbjct: 584641 caacagataactctcttaacatatt 584617
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>ref|XM_638666.1| Dictyostelium discoideum hypothetical protein (DDB0167472), partial
            mRNA
          Length = 1917

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  ttcaggtttaaaaaatatta 130
            ||||||||||||||||||||
Sbjct: 1356 ttcaggtttaaaaaatatta 1375
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>ref|XM_510683.1| PREDICTED: Pan troglodytes similar to U3 snoRNP protein 3 homolog;
           mitochondrial ribosomal protein S4 (LOC453760), mRNA
          Length = 1188

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 735 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 676

                       
Query: 304 ggctggatcggt 315
           ||| || |||||
Sbjct: 675 ggcggggtcggt 664
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>ref|XM_368672.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00572.4) partial mRNA
          Length = 1647

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 cccaggtgatgaagtcctcc 283
           ||||||||||||||||||||
Sbjct: 886 cccaggtgatgaagtcctcc 867
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>ref|XM_420575.1| PREDICTED: Gallus gallus similar to CL3AA (LOC422616), mRNA
          Length = 8478

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  ccacccaggtgatgaagtcc 280
            ||||||||||||||||||||
Sbjct: 5686 ccacccaggtgatgaagtcc 5667
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>gb|AE006109.1| Pasteurella multocida subsp. multocida str. Pm70 section 76 of 204
           of the complete genome
          Length = 13603

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 563 atgttcacgagcttctgcga 582
           ||||||||||||||||||||
Sbjct: 596 atgttcacgagcttctgcga 615
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>gb|BC020557.2| Homo sapiens chromosome 15 open reading frame 12, mRNA (cDNA clone
           IMAGE:3448061), with apparent retained intron
          Length = 1115

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 522 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 463

                       
Query: 304 ggctggatcggt 315
           ||| || |||||
Sbjct: 462 ggcggggtcggt 451
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>ref|NM_018285.2| Homo sapiens IMP3, U3 small nucleolar ribonucleoprotein, homolog
           (yeast) (IMP3), mRNA
          Length = 1160

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 587 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 528

                       
Query: 304 ggctggatcggt 315
           ||| || |||||
Sbjct: 527 ggcggggtcggt 516
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    acacgcacatgtccctgttc 351
              ||||||||||||||||||||
Sbjct: 812134 acacgcacatgtccctgttc 812153
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>emb|AL445646.11| Human DNA sequence from clone RP11-217F16 on chromosome 9 Contains a
             pseudogene similar to part of member RAB7 of RAS oncogene
             family (RAB7) and part of a ribosomal protein S12 (RPS12)
             pseudogene, complete sequence
          Length = 64120

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tagcctcagattcaggttta 120
             ||||||||||||||||||||
Sbjct: 54672 tagcctcagattcaggttta 54691
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>gb|BC011745.2| Homo sapiens IMP3, U3 small nucleolar ribonucleoprotein, homolog
           (yeast), mRNA (cDNA clone MGC:19665 IMAGE:3344519),
           complete cds
          Length = 1110

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 527 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 468

                       
Query: 304 ggctggatcggt 315
           ||| || |||||
Sbjct: 467 ggcggggtcggt 456
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>emb|AL136913.1|HSM801879 Homo sapiens mRNA; cDNA DKFZp586L0118 (from clone DKFZp586L0118)
          Length = 1076

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 545 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 486

                       
Query: 304 ggctggatcggt 315
           ||| || |||||
Sbjct: 485 ggcggggtcggt 474
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>gb|BC006487.1| Homo sapiens IMP3, U3 small nucleolar ribonucleoprotein, homolog
           (yeast), mRNA (cDNA clone MGC:910 IMAGE:3546883),
           complete cds
          Length = 1168

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 544 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 485

                       
Query: 304 ggctggatcggt 315
           ||| || |||||
Sbjct: 484 ggcggggtcggt 473
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>gb|DQ370059.1| Actinobacillus pleuropneumoniae in vivo induced promoter iviX
          Length = 507

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 13  gtacaaactgattggcattt 32
           ||||||||||||||||||||
Sbjct: 386 gtacaaactgattggcattt 405
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>emb|CR604682.1| full-length cDNA clone CS0DC006YF03 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 785

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 210 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 151

                       
Query: 304 ggctggatcggt 315
           ||| || |||||
Sbjct: 150 ggcggggtcggt 139
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>emb|CR601431.1| full-length cDNA clone CS0CAP001YA10 of Thymus of Homo sapiens
           (human)
          Length = 1028

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 484 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 425

                       
Query: 304 ggctggatcggt 315
           ||| || |||||
Sbjct: 424 ggcggggtcggt 413
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>dbj|AK057531.1| Homo sapiens cDNA FLJ32969 fis, clone TESTI2008835, moderately
            similar to U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN
            IMP3
          Length = 2025

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                        
Query: 244  cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
            ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 1445 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 1386

                        
Query: 304  ggctggatcggt 315
            ||| || |||||
Sbjct: 1385 ggcggggtcggt 1374
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>emb|CR599893.1| full-length cDNA clone CS0DB007YJ06 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 1120

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 569 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 510

                       
Query: 304 ggctggatcggt 315
           ||| || |||||
Sbjct: 509 ggcggggtcggt 498
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>emb|CR590019.1| full-length cDNA clone CS0DI023YL18 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1106

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 569 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 510

                       
Query: 304 ggctggatcggt 315
           ||| || |||||
Sbjct: 509 ggcggggtcggt 498
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>dbj|AK001830.1| Homo sapiens cDNA FLJ10968 fis, clone PLACE1000863, moderately
           similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
           YHR148W
          Length = 1115

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 548 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 489

                       
Query: 304 ggctggatcggt 315
           ||| || |||||
Sbjct: 488 ggcggggtcggt 477
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>gb|AC073917.19| Homo sapiens 12q BAC RP11-415D21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163836

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    atcatggcatcataatcatc 213
              ||||||||||||||||||||
Sbjct: 122621 atcatggcatcataatcatc 122602
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>gb|AY050497.1| Homo sapiens BRMS2 mRNA, complete cds
          Length = 1116

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 543 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 484

                       
Query: 304 ggctggatcggt 315
           ||| || |||||
Sbjct: 483 ggcggggtcggt 472
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>gb|AC105020.18| Homo sapiens chromosome 15, clone CTD-2026K11, complete sequence
          Length = 110820

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                         
Query: 244   cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
             ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 74747 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 74688

                         
Query: 304   ggctggatcggt 315
             ||| || |||||
Sbjct: 74687 ggcggggtcggt 74676
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>gb|AC073532.18|AC073532 Homo sapiens 12 BAC RP11-150F20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 143759

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    atcatggcatcataatcatc 213
              ||||||||||||||||||||
Sbjct: 105625 atcatggcatcataatcatc 105606
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>gb|BC049039.1| Danio rerio zgc:56526, mRNA (cDNA clone MGC:56526 IMAGE:5913965),
           complete cds
          Length = 714

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 245 ttgatcttcgaggaatccacccaggtga 272
           |||||||| |||||||||||||| ||||
Sbjct: 566 ttgatcttggaggaatccacccatgtga 539
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>dbj|AK223121.1| Homo sapiens mRNA for U3 snoRNP protein 3 homolog, clone: KAT09342
          Length = 1166

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 59/72 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||| ||||  |||||||||||| | |  || ||||||||
Sbjct: 557 cttgatcttggacgagtccacccaagtgacaaagtcctccatgctgcgcgtgacaaggaa 498

                       
Query: 304 ggctggatcggt 315
           ||| || |||||
Sbjct: 497 ggcggggtcggt 486
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>gb|AC153377.5| Mus musculus 6 BAC RP23-380O16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 195618

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   gcaaacttgagcttcaccat 402
             ||||||||||||||||||||
Sbjct: 51205 gcaaacttgagcttcaccat 51186
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>gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4,
              complete sequence
          Length = 413138

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    ttcaggtttaaaaaatatta 130
              ||||||||||||||||||||
Sbjct: 300614 ttcaggtttaaaaaatatta 300633
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>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence
          Length = 155354

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 581   gacatcaggcaaatcccgtt 600
             ||||||||||||||||||||
Sbjct: 17755 gacatcaggcaaatcccgtt 17736
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>ref|XM_236276.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 1190002L16
           (predicted) (LOC315697), mRNA
          Length = 1070

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 244 cttgatcttcgaggaatccacccaggtgatgaagtcctccatgttcctggtcacaaggaa 303
           ||||||||| || || |||||||||||||  ||||| |||||| | |  || || || ||
Sbjct: 690 cttgatcttggatgagtccacccaggtgacaaagtcttccatgctgcgagtgacgagaaa 631

                           
Query: 304 ggctggatcggtgacc 319
           ||| ||||||||||||
Sbjct: 630 ggcgggatcggtgacc 615
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>ref|NM_200267.1| Danio rerio zgc:56526 (zgc:56526), mRNA
          Length = 714

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 245 ttgatcttcgaggaatccacccaggtga 272
           |||||||| |||||||||||||| ||||
Sbjct: 566 ttgatcttggaggaatccacccatgtga 539
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>gb|AC121766.2| Homo sapiens chromosome 3 clone RP11-245G23, complete sequence
          Length = 175088

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    ggcatttgcattctatagca 45
             ||||||||||||||||||||
Sbjct: 68892 ggcatttgcattctatagca 68911
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>gb|AC157893.2| Medicago truncatula chromosome 7 BAC clone mth2-7m13, complete sequence
          Length = 140479

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 192   aaatcatggcatcataatcatcca 215
             ||||||||||||||| ||||||||
Sbjct: 72712 aaatcatggcatcatcatcatcca 72689
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>emb|CR956623.8| Zebrafish DNA sequence from clone CH211-112D19 in linkage group 2,
             complete sequence
          Length = 93011

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 245   ttgatcttcgaggaatccacccaggtga 272
             |||||||| |||||||||||||| ||||
Sbjct: 25842 ttgatcttggaggaatccacccatgtga 25815
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>emb|BX571944.15| Zebrafish DNA sequence from clone RP71-84D1 in linkage group 13, complete
              sequence
          Length = 152139

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     catattgtagcctcagattc 113
              ||||||||||||||||||||
Sbjct: 114063 catattgtagcctcagattc 114044
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>dbj|AP006148.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D09, TM0304,
              complete sequence
          Length = 114776

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 550    catctgctttatgatgttca 569
              ||||||||||||||||||||
Sbjct: 104014 catctgctttatgatgttca 103995
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>gb|DQ163407.1| Candidatus Hamiltonella defensa clone P080074 genomic sequence
          Length = 1580

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   aaactgattggcatttgcat 36
            ||||||||||||||||||||
Sbjct: 1343 aaactgattggcatttgcat 1362


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,718,181
Number of Sequences: 3902068
Number of extensions: 5718181
Number of successful extensions: 110365
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 110149
Number of HSP's gapped (non-prelim): 211
length of query: 647
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 624
effective length of database: 17,143,297,704
effective search space: 10697417767296
effective search space used: 10697417767296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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