>gb|AY154787.1| Thlaspi perfoliatum isolate Mperf15ITS tRNA-Leu (trnL) gene and
           trnL-trnF intergenic spacer, partial sequence;
           chloroplast
          Length = 736

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 557 tagtaaatgaataaagtgttggaccgg 583
           ||||||||||| |||||||||||||||
Sbjct: 658 tagtaaatgaaaaaagtgttggaccgg 632

>ref|XM_719798.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04575)
           partial mRNA
          Length = 3591

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 498 taattataatgcaaatgattttgtta 523
           |||||||||||||||||||| |||||
Sbjct: 144 taattataatgcaaatgattatgtta 169

>gb|AC008689.8| Homo sapiens chromosome 5 clone CTB-61G23, complete sequence
          Length = 138824

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 438   ttcagaatatcatacaaataaa 459
             ||||||||||||||||||||||
Sbjct: 26958 ttcagaatatcatacaaataaa 26937

>gb|AC112916.3| Homo sapiens X BAC RP11-765I9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172457

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 507    tgcaaatgattttgttatgttt 528
              ||||||||||||||||||||||
Sbjct: 142847 tgcaaatgattttgttatgttt 142826

>gb|AC157661.2| Mus musculus BAC clone RP23-233F23 from chromosome 3, complete sequence
          Length = 195603

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 620   gacagtttctctaatggtgtaa 641
             ||||||||||||||||||||||
Sbjct: 24705 gacagtttctctaatggtgtaa 24726

>gb|AC122706.3| Homo sapiens chromosome 5 clone RP11-114I23, complete sequence
          Length = 118762

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 438   ttcagaatatcatacaaataaa 459
             ||||||||||||||||||||||
Sbjct: 10303 ttcagaatatcatacaaataaa 10324

>gb|AC105109.10| Homo sapiens chromosome 15, clone CTD-2343P13, complete sequence
          Length = 76158

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 164   gaaagcattcaccaaacttccagaat 189
             ||||||||| ||||||||||||||||
Sbjct: 22245 gaaagcatttaccaaacttccagaat 22220

>gb|AC104020.10| Homo sapiens chromosome 15, clone RP11-369K8, complete sequence
          Length = 171307

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 164    gaaagcattcaccaaacttccagaat 189
              ||||||||| ||||||||||||||||
Sbjct: 149048 gaaagcatttaccaaacttccagaat 149023

>emb|CT476800.3| RP43-013D05, complete sequence
          Length = 207013

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 507    tgcaaatgattttgttatgttt 528
              ||||||||||||||||||||||
Sbjct: 202425 tgcaaatgattttgttatgttt 202404

>gb|AC128704.4| Mus musculus BAC clone RP23-436H14 from 3, complete sequence
          Length = 212119

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 620  gacagtttctctaatggtgtaa 641
            ||||||||||||||||||||||
Sbjct: 8828 gacagtttctctaatggtgtaa 8807

>ref|NM_114656.2| Arabidopsis thaliana binding AT3G47860 mRNA, complete cds
          Length = 1162

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 180  cttccagaatcaaaacactct 200
            |||||||||||||||||||||
Sbjct: 1141 cttccagaatcaaaacactct 1161

>emb|AL590378.5| Human DNA sequence from clone RP11-49L2 on chromosome 10 Contains a
             novel gene and a novel MAM domain containing protein,
             complete sequence
          Length = 150889

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 492   gcgatgtaattataatgcaaatgattttgttat 524
             ||||||||||||||| ||||||| ||| |||||
Sbjct: 98424 gcgatgtaattataaggcaaatggtttggttat 98392

>emb|AL358074.22| Human DNA sequence from clone RP11-423C15 on chromosome 9 Contains
            the 5' end of the MAPKAP1 gene for mitogen-activated
            protein kinase associated protein 1, a novel gene, the 5'
            end of the PBX3 gene for pre-B-cell leukemia
            transcription factor 3 and three CpG islands, complete
            sequence
          Length = 109081

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 88   aacaacttcacaaatgatttg 108
            |||||||||||||||||||||
Sbjct: 2621 aacaacttcacaaatgatttg 2601

>emb|AL158827.27| Human DNA sequence from clone RP11-330M2 on chromosome 9 Contains a
             pseudogene similar to part of a zinc finger protein, two
             novel pseudogenes, a novel gene similar to DKFZP434I1117,
             a novel pseudogene (FLJ23476), two novel gene, a novel
             gene similar to MGC12954 and four CpG islands, complete
             sequence
          Length = 186108

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   gaggcttcatttgggtactaa 280
             |||||||||||||||||||||
Sbjct: 10135 gaggcttcatttgggtactaa 10115

>emb|AL607024.17| Mouse DNA sequence from clone RP23-194P5 on chromosome 11 Contains a
             novel gene, the Pafah1b1 gene for platelet-activating
             factor acetylhydrolase isoform 1b beta1 subunit, the 5'
             end of a novel gene and two CpG islands, complete sequence
          Length = 137908

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 386   ttgtgaataataatatgaacc 406
             |||||||||||||||||||||
Sbjct: 72702 ttgtgaataataatatgaacc 72722

>emb|AL049746.1|ATT23J7 Arabidopsis thaliana DNA chromosome 3, BAC clone T23J7
          Length = 92493

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 180   cttccagaatcaaaacactct 200
             |||||||||||||||||||||
Sbjct: 80883 cttccagaatcaaaacactct 80863

>gb|U84245.1|RNU84245 Rattus norvegicus Y4 receptor gene, complete cds
          Length = 1128

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 343 aaatgaaccagatgaccacaa 363
           |||||||||||||||||||||
Sbjct: 499 aaatgaaccagatgaccacaa 479

>gb|AC010859.5| Homo sapiens chromosome , clone RP11-3D19, complete sequence
          Length = 171301

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 640    aactactggattcaagcaatt 660
              |||||||||||||||||||||
Sbjct: 126140 aactactggattcaagcaatt 126160

>gb|AY044334.1| Arabidopsis thaliana putative protein (T23J7.190) mRNA, complete cds
          Length = 1143

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 180  cttccagaatcaaaacactct 200
            |||||||||||||||||||||
Sbjct: 1122 cttccagaatcaaaacactct 1142

>dbj|AK050863.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030026P09
            product:unclassifiable, full insert sequence
          Length = 3314

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 386  ttgtgaataataatatgaacc 406
            |||||||||||||||||||||
Sbjct: 2843 ttgtgaataataatatgaacc 2823

>ref|NM_031581.1| Rattus norvegicus pancreatic polypeptide receptor 1 (Ppyr1), mRNA
          Length = 1259

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 343 aaatgaaccagatgaccacaa 363
           |||||||||||||||||||||
Sbjct: 562 aaatgaaccagatgaccacaa 542

>gb|AC153891.6| Mus musculus 10 BAC RP23-415J15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 198332

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 28     aaattatgattaacaacagagacaa 52
              ||||||||||| |||||||||||||
Sbjct: 107266 aaattatgattcacaacagagacaa 107290

>emb|Z68180.1|RNPP1GN R.norvegicus pancreatic polypeptide receptor PP1 gene
          Length = 1209

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 343 aaatgaaccagatgaccacaa 363
           |||||||||||||||||||||
Sbjct: 535 aaatgaaccagatgaccacaa 515

>dbj|AP006278.1| Homo sapiens genomic DNA, chromosome 8q22.1, clone: KB1573B4, complete
             sequence
          Length = 157927

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 640   aactactggattcaagcaatt 660
             |||||||||||||||||||||
Sbjct: 82397 aactactggattcaagcaatt 82417

>gb|U42388.1|RNU42388 Rattus norvegicus panceatic polypeptide receptor mRNA, complete cds
          Length = 1259

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 343 aaatgaaccagatgaccacaa 363
           |||||||||||||||||||||
Sbjct: 562 aaatgaaccagatgaccacaa 542

>gb|AC168272.8| Mus musculus 10 BAC RP24-261C21 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 189395

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 28    aaattatgattaacaacagagacaa 52
             ||||||||||| |||||||||||||
Sbjct: 46084 aaattatgattcacaacagagacaa 46060


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,457,293
Number of Sequences: 3902068
Number of extensions: 8457293
Number of successful extensions: 170276
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 170220
Number of HSP's gapped (non-prelim): 56
length of query: 730
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 707
effective length of database: 17,143,297,704
effective search space: 12120311476728
effective search space used: 12120311476728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)