ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal37n13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PSK3_ORYSA (Q9FRF9) Phytosulfokines 3 precursor [Contains: Phyto... 38 0.011
2PSK2_ARATH (O81003) Phytosulfokines 2 precursor (AtPSK2) [Contai... 38 0.015
3PSK4_ORYSA (Q9AR88) Phytosulfokines 4 precursor [Contains: Phyto... 37 0.025
4PSK5_ARATH (Q9FEB4) Phytosulfokines 5 precursor (AtPSK5) [Contai... 36 0.056
5PSK_ASPOF (Q9FS10) Phytosulfokines precursor [Contains: Phytosul... 33 0.28
6PSK3_ARATH (Q9M2Y0) Phytosulfokines 3 precursor (AtPSK3) [Contai... 32 1.0
7PSK1_ARATH (Q9LMY9) Phytosulfokines 1 precursor (AtPSK1) [Contai... 30 3.1
8PSK4_ARATH (Q9SZG4) Putative phytosulfokines 4 precursor (AtPSK4... 29 5.2

>PSK3_ORYSA (Q9FRF9) Phytosulfokines 3 precursor [Contains:|
           Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a);
           Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)]
          Length = 75

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = -1

Query: 328 LMRRTLVAHTDYIYTQGKHN 269
           L+ R LVAH DYIYTQGKHN
Sbjct: 56  LVERLLVAHLDYIYTQGKHN 75



to top

>PSK2_ARATH (O81003) Phytosulfokines 2 precursor (AtPSK2) [Contains:|
           Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a);
           Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)]
          Length = 87

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -1

Query: 328 LMRRTLVAHTDYIYTQGK 275
           LMRRTLVAHTDYIYTQ K
Sbjct: 67  LMRRTLVAHTDYIYTQKK 84



to top

>PSK4_ORYSA (Q9AR88) Phytosulfokines 4 precursor [Contains:|
           Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a);
           Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)]
          Length = 83

 Score = 37.0 bits (84), Expect = 0.025
 Identities = 16/20 (80%), Positives = 16/20 (80%)
 Frame = -1

Query: 328 LMRRTLVAHTDYIYTQGKHN 269
           L RRTL AHTDYIYTQ  HN
Sbjct: 64  LARRTLTAHTDYIYTQQHHN 83



to top

>PSK5_ARATH (Q9FEB4) Phytosulfokines 5 precursor (AtPSK5) [Contains:|
           Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a);
           Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)]
          Length = 77

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = -1

Query: 328 LMRRTLVAHTDYIYTQGKHN 269
           L+RRTLVAHTDYIYTQ  HN
Sbjct: 58  LIRRTLVAHTDYIYTQ-NHN 76



to top

>PSK_ASPOF (Q9FS10) Phytosulfokines precursor [Contains: Phytosulfokine-alpha|
           (PSK-alpha) (Phytosulfokine-a); Phytosulfokine-beta
           (PSK-beta) (Phytosulfokine-b)]
          Length = 75

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 16/20 (80%), Positives = 16/20 (80%)
 Frame = -1

Query: 328 LMRRTLVAHTDYIYTQGKHN 269
           LMRRTL AH DYIYTQ  HN
Sbjct: 56  LMRRTLTAHVDYIYTQ-DHN 74



to top

>PSK3_ARATH (Q9M2Y0) Phytosulfokines 3 precursor (AtPSK3) [Contains:|
           Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a);
           Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)]
          Length = 79

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = -1

Query: 328 LMRRTLVAHTDYIYTQ 281
           L+RR+LV HTDYIYTQ
Sbjct: 60  LIRRSLVLHTDYIYTQ 75



to top

>PSK1_ARATH (Q9LMY9) Phytosulfokines 1 precursor (AtPSK1) [Contains:|
           Phytosulfokine-alpha (PSK-alpha) (Phytosulfokine-a);
           Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)]
          Length = 87

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = -1

Query: 328 LMRRTLVAHTDYIYTQ 281
           L+++T+ AHTDYIYTQ
Sbjct: 66  LVKKTVAAHTDYIYTQ 81



to top

>PSK4_ARATH (Q9SZG4) Putative phytosulfokines 4 precursor (AtPSK4) [Contains:|
           Phytosulfokine-alpha-like (PSK-alpha-like)
           (Phytosulfokine-a-like); Phytosulfokine-beta (PSK-beta)
           (Phytosulfokine-b)]
          Length = 87

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -1

Query: 328 LMRRTLVAHTDYIYT 284
           L+RRTL AH DYIYT
Sbjct: 67  LVRRTLTAHLDYIYT 81


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,223,390
Number of Sequences: 219361
Number of extensions: 713852
Number of successful extensions: 1315
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top