ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal38c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF422696.1| Staphylococcus aureus strain HU25 SCCmec type III... 44 0.32
2dbj|AB037671.1| Staphylococcus aureus DNA, type III staphylococc... 44 0.32
3emb|BX323984.7| Zebrafish DNA sequence from clone CH211-157H5 in... 44 0.32
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
5dbj|AB047089.2| Staphylococcus aureus DNA, right extremity of Ty... 44 0.32
6dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
7dbj|AB038513.1| Staphylococcus aureus DNA, SRImec-III and SCCmec... 44 0.32
8emb|AL844555.8| Mouse DNA sequence from clone RP23-251E2 on chro... 44 0.32
9ref|XM_724640.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 42 1.3
10ref|XM_674239.1| Plasmodium berghei strain ANKA hypothetical pro... 42 1.3
11emb|CR381694.8| Zebrafish DNA sequence from clone CH211-55I2 in ... 42 1.3
12gb|AC022541.11| Homo sapiens chromosome 10 clone RP11-4O7, compl... 42 1.3
13gb|AC069026.5| Homo sapiens chromosome 10 clone RP11-561F6, comp... 42 1.3
14emb|Z81039.1|CEC25D7 Caenorhabditis elegans Cosmid C25D7, comple... 42 1.3
15emb|AL132949.2|CEY53F4B Caenorhabditis elegans YAC Y53F4B, compl... 42 1.3
16gb|AC009391.16| Drosophila melanogaster clone BACR21I23, complet... 40 5.0
17gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
18gb|AC140985.3| Mus musculus BAC clone RP23-60H23 from chromosome... 40 5.0
19gb|AY632900.1| Ruminococcus albus xylanase (xyn11C) gene, comple... 40 5.0
20gb|AY448010.1|AY448010S1 Ipomoea trifida haplotype S1 self-incom... 40 5.0
21emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA 40 5.0
22emb|Z81068.1|CEF25H5 Caenorhabditis elegans Cosmid F25H5, comple... 40 5.0
23emb|Z72518.1|CEZC374 Caenorhabditis elegans Cosmid ZC374, comple... 40 5.0
24emb|AL021497.1|CEY51A2D Caenorhabditis elegans YAC Y51A2D, compl... 40 5.0
25gb|L07143.2| Caenorhabditis elegans cosmid B0523, complete sequence 40 5.0
26gb|AC141322.24| Medicago truncatula clone mth2-8e1, complete seq... 40 5.0
27gb|AC148292.8| Medicago truncatula clone mth2-15m24, complete se... 40 5.0
28gb|AC133571.47| Medicago truncatula clone mth2-10h12, complete s... 40 5.0
29emb|AL137145.13| Human DNA sequence from clone RP11-563J2 on chr... 40 5.0
30emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ... 40 5.0
31emb|BX649451.4| Zebrafish DNA sequence from clone DKEY-206M7 in ... 40 5.0
32gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; ... 40 5.0
33gb|AC023705.4| Drosophila melanogaster X BAC RP98-7L6 (Roswell P... 40 5.0
34gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell... 40 5.0
35gb|AC023738.3| Drosophila melanogaster X BAC RP98-6F4 (Roswell P... 40 5.0
36gb|AF361326.1|AF361326 Folsomia candida labial gene, partial cds 40 5.0
37dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
38gb|AC084414.2|AC084414 Arabidopsis thaliana chromosome 1 BAC F27... 40 5.0
39gb|AC092601.3| Homo sapiens BAC clone RP11-125M15 from 2, comple... 40 5.0
40gb|AY117382.1| Chrysomela lapponica haplotype ClapF mitochondria... 40 5.0
41gb|AC009434.19| Homo sapiens chromosome 15, clone RP11-96C21, co... 40 5.0
42gb|U41625.1| Caenorhabditis elegans cosmid K03A1, complete sequence 40 5.0
43gb|AE003780.4| Drosophila melanogaster chromosome 3R, section 11... 40 5.0
44gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 ... 40 5.0
45gb|AE003447.5| Drosophila melanogaster chromosome X, section 31 ... 40 5.0
46gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 ... 40 5.0
47emb|CT025555.7| Mouse DNA sequence from clone RP24-84E11 on chro... 40 5.0
48dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s... 40 5.0
49dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ... 40 5.0
50dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl... 40 5.0
51emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chr... 40 5.0
52emb|AL831773.2| Mouse DNA sequence from clone RP23-296B1 on chro... 40 5.0 
>gb|AF422696.1| Staphylococcus aureus strain HU25 SCCmec type III sequence between
            Tn554 and orfX
          Length = 9515

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 115  atatcaattccaaaaaatttaa 136
            ||||||||||||||||||||||
Sbjct: 7138 atatcaattccaaaaaatttaa 7117
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>dbj|AB037671.1| Staphylococcus aureus DNA, type III staphylococcal cassette chromosome
             mec, strain 85/2082
          Length = 68256

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 115   atatcaattccaaaaaatttaa 136
             ||||||||||||||||||||||
Sbjct: 65818 atatcaattccaaaaaatttaa 65797
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>emb|BX323984.7| Zebrafish DNA sequence from clone CH211-157H5 in linkage group 1,
             complete sequence
          Length = 177080

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 9     actctacaaaaatgtacatctg 30
             ||||||||||||||||||||||
Sbjct: 81614 actctacaaaaatgtacatctg 81635
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 4        cacaaactctacaaaaatgtacatctgaatacaatttg 41
                |||||| |||| || ||||||||||| |||||||||||
Sbjct: 21703558 cacaaattctaaaagaatgtacatctaaatacaatttg 21703521
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>dbj|AB047089.2| Staphylococcus aureus DNA, right extremity of Type-III SCCmec
             (Staphylococcal cassette chromosome mec) and it's flanking
             chromosomal region, strain:85/3907
          Length = 30059

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 115   atatcaattccaaaaaatttaa 136
             ||||||||||||||||||||||
Sbjct: 27618 atatcaattccaaaaaatttaa 27597
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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534A03
          Length = 153170

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 4     cacaaactctacaaaaatgtacatctgaatacaatttg 41
             |||||| |||| || ||||||||||| |||||||||||
Sbjct: 20741 cacaaattctaaaagaatgtacatctaaatacaatttg 20704
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>dbj|AB038513.1| Staphylococcus aureus DNA, SRImec-III and SCCmec-III region,
             strain:85/2082
          Length = 23752

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 115   atatcaattccaaaaaatttaa 136
             ||||||||||||||||||||||
Sbjct: 21314 atatcaattccaaaaaatttaa 21293
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>emb|AL844555.8| Mouse DNA sequence from clone RP23-251E2 on chromosome 2, complete
             sequence
          Length = 122211

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 36    aatttgaaattggcctggaaat 57
             ||||||||||||||||||||||
Sbjct: 68081 aatttgaaattggcctggaaat 68060
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>ref|XM_724640.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00194)
            partial mRNA
          Length = 3696

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 111  gccaatatcaattccaaaaaattta 135
            |||||||||||||| ||||||||||
Sbjct: 2488 gccaatatcaattctaaaaaattta 2512
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>ref|XM_674239.1| Plasmodium berghei strain ANKA hypothetical protein (PB000633.01.0)
            partial mRNA
          Length = 3822

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 125  caaaaaatttaatttgaattt 145
            |||||||||||||||||||||
Sbjct: 3267 caaaaaatttaatttgaattt 3287
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>emb|CR381694.8| Zebrafish DNA sequence from clone CH211-55I2 in linkage group 10,
             complete sequence
          Length = 178736

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 7     aaactctacaaaaatgtacat 27
             |||||||||||||||||||||
Sbjct: 75215 aaactctacaaaaatgtacat 75195
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>gb|AC022541.11| Homo sapiens chromosome 10 clone RP11-4O7, complete sequence
          Length = 163179

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   aaatttaatttgaatttttga 149
             |||||||||||||||||||||
Sbjct: 49503 aaatttaatttgaatttttga 49483
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>gb|AC069026.5| Homo sapiens chromosome 10 clone RP11-561F6, complete sequence
          Length = 171142

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 129    aaatttaatttgaatttttga 149
              |||||||||||||||||||||
Sbjct: 151123 aaatttaatttgaatttttga 151103
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>emb|Z81039.1|CEC25D7 Caenorhabditis elegans Cosmid C25D7, complete sequence
          Length = 42361

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 120   aattccaaaaaatttaatttgaatttttg 148
             |||||||||||||||||||| | ||||||
Sbjct: 28876 aattccaaaaaatttaatttaagtttttg 28904
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>emb|AL132949.2|CEY53F4B Caenorhabditis elegans YAC Y53F4B, complete sequence
          Length = 227606

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 127   aaaaatttaatttgaattttt 147
             |||||||||||||||||||||
Sbjct: 79650 aaaaatttaatttgaattttt 79630
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>gb|AC009391.16| Drosophila melanogaster clone BACR21I23, complete sequence
          Length = 189254

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    caaaaatgtacatctgaata 34
             ||||||||||||||||||||
Sbjct: 72523 caaaaatgtacatctgaata 72504
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>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0093E24, complete sequence
          Length = 146492

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   aaaatttaatttgaattttt 147
             ||||||||||||||||||||
Sbjct: 73912 aaaatttaatttgaattttt 73931
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>gb|AC140985.3| Mus musculus BAC clone RP23-60H23 from chromosome 13, complete sequence
          Length = 222741

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 36     aatttgaaattggcctggaaatgt 59
              ||||||||||||||||| ||||||
Sbjct: 182320 aatttgaaattggcctgcaaatgt 182297
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>gb|AY632900.1| Ruminococcus albus xylanase (xyn11C) gene, complete cds
          Length = 1629

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 302  agcagnttatctgtcaggcagatggag 328
            ||||| ||||||| |||||||||||||
Sbjct: 1443 agcagtttatctggcaggcagatggag 1469
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>gb|AY448010.1|AY448010S1 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig
             SR1
          Length = 82054

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   atttaatttgaatttttgag 150
             ||||||||||||||||||||
Sbjct: 74577 atttaatttgaatttttgag 74596
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>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 121   attccaaaaaatttaatttgaatt 144
             |||||||||||||||||| |||||
Sbjct: 84157 attccaaaaaatttaattagaatt 84180
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>emb|Z81068.1|CEF25H5 Caenorhabditis elegans Cosmid F25H5, complete sequence
          Length = 38692

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 126   aaaaaatttaatttgaatttttga 149
             ||||||||||| ||||||||||||
Sbjct: 32544 aaaaaatttaagttgaatttttga 32567
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>emb|Z72518.1|CEZC374 Caenorhabditis elegans Cosmid ZC374, complete sequence
          Length = 20600

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 119 caattccaaaaaatttaatt 138
           ||||||||||||||||||||
Sbjct: 501 caattccaaaaaatttaatt 482
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>emb|AL021497.1|CEY51A2D Caenorhabditis elegans YAC Y51A2D, complete sequence
          Length = 139259

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    aaaaatttaatttgaatttt 146
              ||||||||||||||||||||
Sbjct: 123580 aaaaatttaatttgaatttt 123561
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>gb|L07143.2| Caenorhabditis elegans cosmid B0523, complete sequence
          Length = 18334

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   aaaaatttaatttgaatttt 146
             ||||||||||||||||||||
Sbjct: 10476 aaaaatttaatttgaatttt 10457
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>gb|AC141322.24| Medicago truncatula clone mth2-8e1, complete sequence
          Length = 87559

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   caattccaaaaaatttaatttgaa 142
             ||||||||||| ||||||||||||
Sbjct: 47186 caattccaaaatatttaatttgaa 47163



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   caattccaaaaaatttaatttgaa 142
             ||||||||||| ||||||||||||
Sbjct: 42820 caattccaaaatatttaatttgaa 42797
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>gb|AC148292.8| Medicago truncatula clone mth2-15m24, complete sequence
          Length = 120077

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   ttcttctcctaaatgattac 272
             ||||||||||||||||||||
Sbjct: 22674 ttcttctcctaaatgattac 22655
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>gb|AC133571.47| Medicago truncatula clone mth2-10h12, complete sequence
          Length = 85905

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   aatttaatttgaatttttga 149
             ||||||||||||||||||||
Sbjct: 84654 aatttaatttgaatttttga 84673
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>emb|AL137145.13| Human DNA sequence from clone RP11-563J2 on chromosome 10 Contains the
             3' end of the PRKCQ gene for protein kinase C, theta and a
             CpG island, complete sequence
          Length = 189767

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   aaatttaatttgaatttttg 148
             ||||||||||||||||||||
Sbjct: 64248 aaatttaatttgaatttttg 64267
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>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 121   attccaaaaaatttaatttgaatt 144
             |||||||||||||||||| |||||
Sbjct: 84405 attccaaaaaatttaattagaatt 84428
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>emb|BX649451.4| Zebrafish DNA sequence from clone DKEY-206M7 in linkage group 10,
             complete sequence
          Length = 97299

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   ttatgggccaatatcaattc 124
             ||||||||||||||||||||
Sbjct: 58853 ttatgggccaatatcaattc 58834
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>gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; lozenge (lz) and c12.1
             genes, complete cds; and c12.2 gene, partial cds
          Length = 45142

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   aaaaaatttaatttgaatttttga 149
             |||||||||||||| |||||||||
Sbjct: 36491 aaaaaatttaatttaaatttttga 36468
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>gb|AC023705.4| Drosophila melanogaster X BAC RP98-7L6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184796

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 126   aaaaaatttaatttgaatttttga 149
             |||||||||||||| |||||||||
Sbjct: 67006 aaaaaatttaattttaatttttga 67029



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 126   aaaaaatttaatttgaatttttga 149
             |||||||||||||| |||||||||
Sbjct: 49380 aaaaaatttaatttcaatttttga 49403
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>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184334

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 126   aaaaaatttaatttgaatttttga 149
             |||||||||||||| |||||||||
Sbjct: 59003 aaaaaatttaatttaaatttttga 59026
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>gb|AC023738.3| Drosophila melanogaster X BAC RP98-6F4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 103196

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   aaaaaatttaatttgaatttttga 149
             |||||||||||||| |||||||||
Sbjct: 90105 aaaaaatttaatttaaatttttga 90082
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>gb|AF361326.1|AF361326 Folsomia candida labial gene, partial cds
          Length = 879

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 130 aatttaatttgaatttttga 149
           ||||||||||||||||||||
Sbjct: 497 aatttaatttgaatttttga 478
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 128     aaaatttaatttgaattttt 147
               ||||||||||||||||||||
Sbjct: 8151679 aaaatttaatttgaattttt 8151698
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>gb|AC084414.2|AC084414 Arabidopsis thaliana chromosome 1 BAC F27K7 genomic sequence, complete
             sequence
          Length = 54313

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   aaaaaatttaatttgaattt 145
             ||||||||||||||||||||
Sbjct: 30786 aaaaaatttaatttgaattt 30767
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>gb|AC092601.3| Homo sapiens BAC clone RP11-125M15 from 2, complete sequence
          Length = 198364

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   caaaaaatttaatttgaatt 144
             ||||||||||||||||||||
Sbjct: 62660 caaaaaatttaatttgaatt 62641
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>gb|AY117382.1| Chrysomela lapponica haplotype ClapF mitochondrial control region,
            complete sequence
          Length = 4640

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 128  aaaatttaatttgaattttt 147
            ||||||||||||||||||||
Sbjct: 1205 aaaatttaatttgaattttt 1224
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>gb|AC009434.19| Homo sapiens chromosome 15, clone RP11-96C21, complete sequence
          Length = 177207

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aaactctacaaaaatgtaca 26
             ||||||||||||||||||||
Sbjct: 59927 aaactctacaaaaatgtaca 59908
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>gb|U41625.1| Caenorhabditis elegans cosmid K03A1, complete sequence
          Length = 35227

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   aaaaatttaatttgaatttt 146
             ||||||||||||||||||||
Sbjct: 34259 aaaaatttaatttgaatttt 34278
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>gb|AE003780.4| Drosophila melanogaster chromosome 3R, section 118 of 118 of the complete
              sequence
          Length = 256818

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     caaaaatgtacatctgaata 34
              ||||||||||||||||||||
Sbjct: 140087 caaaaatgtacatctgaata 140068
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>gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 of 74 of the complete
              sequence
          Length = 307201

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 126    aaaaaatttaatttgaatttttga 149
              |||||||||||||| |||||||||
Sbjct: 173656 aaaaaatttaatttcaatttttga 173633



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 126    aaaaaatttaatttgaatttttga 149
              |||||||||||||| |||||||||
Sbjct: 156030 aaaaaatttaattttaatttttga 156007
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>gb|AE003447.5| Drosophila melanogaster chromosome X, section 31 of 74 of the complete
             sequence
          Length = 288721

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 126   aaaaaatttaatttgaatttttga 149
             |||||||||||||| |||||||||
Sbjct: 34627 aaaaaatttaatttaaatttttga 34650
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>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete
              sequence
          Length = 290970

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 126    aaaaaatttaatttgaatttttga 149
              |||||||||||||| |||||||||
Sbjct: 264718 aaaaaatttaatttaaatttttga 264695
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>emb|CT025555.7| Mouse DNA sequence from clone RP24-84E11 on chromosome 13, complete
             sequence
          Length = 197389

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    aatttgaaattggcctggaaatgt 59
             ||||||||||||||||| ||||||
Sbjct: 20518 aatttgaaattggcctgcaaatgt 20495
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>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 121   attccaaaaaatttaatttgaatt 144
             |||||||||||||||||| |||||
Sbjct: 84155 attccaaaaaatttaattagaatt 84178
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>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   aaaaaatttaatttgaatttttga 149
             |||||||||||||| |||||||||
Sbjct: 59824 aaaaaatttaatttaaatttttga 59801
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>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 121   attccaaaaaatttaatttgaatt 144
             |||| |||||||||||||||||||
Sbjct: 83925 attcaaaaaaatttaatttgaatt 83948
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>emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chromosome X, complete
              sequence
          Length = 192322

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    aaaatttaatttgaattttt 147
              ||||||||||||||||||||
Sbjct: 104303 aaaatttaatttgaattttt 104284
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>emb|AL831773.2| Mouse DNA sequence from clone RP23-296B1 on chromosome 4, complete
             sequence
          Length = 154298

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   aaaaaatttaatttgaattt 145
             ||||||||||||||||||||
Sbjct: 63795 aaaaaatttaatttgaattt 63776


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,446,609
Number of Sequences: 3902068
Number of extensions: 4446609
Number of successful extensions: 90738
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90540
Number of HSP's gapped (non-prelim): 198
length of query: 372
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 350
effective length of database: 17,147,199,772
effective search space: 6001519920200
effective search space used: 6001519920200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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