ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal8i04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450769.1| Oryza sativa (japonica cultivar-group), mRNA 60 8e-06
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
3dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
4dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 8e-06
5emb|AL935122.10| Zebrafish DNA sequence from clone CH211-197C14 ... 48 0.031
6gb|AC147021.3| Pan troglodytes BAC clone RP43-85B14 from 7, comp... 46 0.12
7gb|AC006319.3| Homo sapiens PAC clone RP5-837C9 from 7, complete... 46 0.12
8gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence 44 0.49
9gb|AC159426.1| Trypanosoma brucei chromosome 7 clone RPCI93-27M1... 44 0.49
10gb|AC098931.3| Homo sapiens chromosome 3 clone RP11-353I6, compl... 44 0.49
11emb|BX901973.12| Zebrafish DNA sequence from clone DKEY-26L17 in... 42 1.9
12emb|AL358875.13| Human DNA sequence from clone RP11-312H18 on ch... 42 1.9
13gb|AY936598.1| Phyllanthus gardnerianus trnK gene, partial seque... 42 1.9
14gb|AY936585.1| Phyllanthus chrysanthus trnK gene, partial sequen... 42 1.9
15gb|AC007051.3| Homo sapiens chromosome 3, clone hRPK.44_A_1, com... 42 1.9
16gb|AC007919.18| Homo sapiens 3 BAC RP11-408H1 (Roswell Park Canc... 42 1.9
17gb|AC068051.7| Homo sapiens BAC clone RP11-172J1 from 2, complet... 42 1.9
18emb|BX649514.8| Zebrafish DNA sequence from clone CH211-232P6 in... 42 1.9
19gb|AC010072.5|AC010072 Homo sapiens chromosome 14q31 clone CTD-2... 42 1.9
20emb|BX649444.12| Zebrafish DNA sequence from clone DKEYP-27E10 i... 42 1.9
21gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 42 1.9
22emb|CR848815.7| Zebrafish DNA sequence from clone CH211-197C11 i... 42 1.9
23emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chr... 42 1.9
24emb|AL732460.7| Mouse DNA sequence from clone RP23-113I19 on chr... 42 1.9
25ref|XM_417954.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ... 40 7.6
26gb|AC140370.3| Mus musculus BAC clone RP24-75N6 from chromosome ... 40 7.6
27emb|BX664703.21| Zebrafish DNA sequence from clone DKEYP-74A8 in... 40 7.6
28ref|XM_643567.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 7.6
29ref|XM_644716.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 7.6
30ref|XM_648378.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 7.6
31ref|XM_648663.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 7.6
32ref|XM_660450.1| Cryptosporidium hominis TU502 hypothetical prot... 40 7.6
33gb|AY319521.1| Synthetic construct Bacteriophage SopE-Phi kanamy... 40 7.6
34emb|AL391318.21| Human DNA sequence from clone RP11-496H23 on ch... 40 7.6
35gb|AC090698.14| Homo sapiens chromosome 17, clone RP11-296K13, c... 40 7.6
36emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 i... 40 7.6
37emb|CR394534.6| Zebrafish DNA sequence from clone CH211-276A17 i... 40 7.6
38emb|CR392348.10| Zebrafish DNA sequence from clone DKEYP-51A12 i... 40 7.6
39gb|AC012310.5| Homo sapiens chromosome 19 clone CTC-518O7, compl... 40 7.6
40gb|AC026337.29| Homo sapiens 2 BAC RP11-105E24 (Roswell Park Can... 40 7.6
41emb|BX569785.12| Zebrafish DNA sequence from clone DKEY-159F4 in... 40 7.6
42dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 40 7.6
43ref|XM_628123.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 7.6
44gb|AC026445.5| Homo sapiens chromosome 5 clone CTD-2306M10, comp... 40 7.6
45gb|AC016564.6| Homo sapiens chromosome 5 clone CTC-538E9, comple... 40 7.6
46emb|CR338830.1| Gallus gallus finished cDNA, clone ChEST974l3 40 7.6
47gb|AC021713.7|AC021713 Homo sapiens chromosome , clone RP11-63D1... 40 7.6
48gb|AC010420.11| Homo sapiens chromosome 5 clone CTD-2187J20, com... 40 7.6
49gb|AC018678.9| Homo sapiens BAC clone RP11-279E17 from 2, comple... 40 7.6
50emb|BX470223.14| Zebrafish DNA sequence from clone DKEY-45P9 in ... 40 7.6
51gb|AC147034.2| Mus musculus BAC clone RP23-189C2 from chromosome... 40 7.6
52emb|BX890617.13| Zebrafish DNA sequence from clone DKEYP-84F11 i... 40 7.6
53emb|BX465184.7| Zebrafish DNA sequence from clone DKEY-20N10 in ... 40 7.6
54emb|BX005050.6| Zebrafish DNA sequence from clone CH211-11A11, c... 40 7.6
55emb|BX005067.6| Zebrafish DNA sequence from clone CH211-182K2 in... 40 7.6
56emb|AL772339.5| Zebrafish DNA sequence from clone CH211-139K23, ... 40 7.6
57gb|M79460.1|BACHYMEPR B.firmus hypothetical membrane protein and... 40 7.6
58dbj|AB026531.1| Lordiphosa pseudotenuicauda gene for alcohol deh... 40 7.6 
>ref|XM_450769.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3772

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 519  ctgggcttcaaactcctgcttgctcatgaatattgcaactgg 560
            |||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 3412 ctgggcttcaaactcctgcttgctgatgaagattgctactgg 3371
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                          
Query: 519      ctgggcttcaaactcctgcttgctcatgaatattgcaactgg 560
                |||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 12677388 ctgggcttcaaactcctgcttgctgatgaagattgctactgg 12677429
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>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0041C07
          Length = 179047

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                        
Query: 519    ctgggcttcaaactcctgcttgctcatgaatattgcaactgg 560
              |||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 143326 ctgggcttcaaactcctgcttgctgatgaagattgctactgg 143367
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>dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D12, full
            insert sequence
          Length = 3772

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 519  ctgggcttcaaactcctgcttgctcatgaatattgcaactgg 560
            |||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 3412 ctgggcttcaaactcctgcttgctgatgaagattgctactgg 3371
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>emb|AL935122.10| Zebrafish DNA sequence from clone CH211-197C14 in linkage group 6,
             complete sequence
          Length = 198363

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 140   agatactcaaatgacttggcaaaa 163
             ||||||||||||||||||||||||
Sbjct: 47931 agatactcaaatgacttggcaaaa 47954
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>gb|AC147021.3| Pan troglodytes BAC clone RP43-85B14 from 7, complete sequence
          Length = 159960

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 132  acaaaagaagatactcaaatgac 154
            |||||||||||||||||||||||
Sbjct: 4991 acaaaagaagatactcaaatgac 4969
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>gb|AC006319.3| Homo sapiens PAC clone RP5-837C9 from 7, complete sequence
          Length = 85821

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 132   acaaaagaagatactcaaatgac 154
             |||||||||||||||||||||||
Sbjct: 29899 acaaaagaagatactcaaatgac 29921
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>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 39     aaactatccagaataatacactgaaa 64
              ||||||||||||||||| ||||||||
Sbjct: 395650 aaactatccagaataattcactgaaa 395625
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>gb|AC159426.1| Trypanosoma brucei chromosome 7 clone RPCI93-27M11, complete sequence
          Length = 156973

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 39     aaactatccagaataatacactgaaa 64
              ||||||||||||||||| ||||||||
Sbjct: 143802 aaactatccagaataattcactgaaa 143777
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>gb|AC098931.3| Homo sapiens chromosome 3 clone RP11-353I6, complete sequence
          Length = 179082

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 133    caaaagaagatactcaaatgac 154
              ||||||||||||||||||||||
Sbjct: 169956 caaaagaagatactcaaatgac 169977
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>emb|BX901973.12| Zebrafish DNA sequence from clone DKEY-26L17 in linkage group 3,
             complete sequence
          Length = 226081

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   tgaatacaaaagaagatactc 147
             |||||||||||||||||||||
Sbjct: 16052 tgaatacaaaagaagatactc 16072
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>emb|AL358875.13| Human DNA sequence from clone RP11-312H18 on chromosome 1, complete
              sequence
          Length = 171635

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 49     gaataatacactgaaaagtgc 69
              |||||||||||||||||||||
Sbjct: 158476 gaataatacactgaaaagtgc 158496
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>gb|AY936598.1| Phyllanthus gardnerianus trnK gene, partial sequence; and maturase
           K (matK) gene, complete cds; chloroplast
          Length = 1835

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 103 aaattgaaaatgaagattgaggaat 127
           |||||||||||||| ||||||||||
Sbjct: 155 aaattgaaaatgaaaattgaggaat 179
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>gb|AY936585.1| Phyllanthus chrysanthus trnK gene, partial sequence; and maturase K
           (matK) gene, complete cds; chloroplast
          Length = 1818

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 103 aaattgaaaatgaagattgaggaat 127
           |||||||||||||| ||||||||||
Sbjct: 155 aaattgaaaatgaaaattgaggaat 179
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>gb|AC007051.3| Homo sapiens chromosome 3, clone hRPK.44_A_1, complete sequence
          Length = 167810

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 206   aaaaaagtactctattatagctaaactgc 234
             |||||| ||||||||||||| ||||||||
Sbjct: 14195 aaaaaaatactctattatagttaaactgc 14167
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>gb|AC007919.18| Homo sapiens 3 BAC RP11-408H1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184989

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 206    aaaaaagtactctattatagctaaactgc 234
              |||||| ||||||||||||| ||||||||
Sbjct: 121931 aaaaaaatactctattatagttaaactgc 121959
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>gb|AC068051.7| Homo sapiens BAC clone RP11-172J1 from 2, complete sequence
          Length = 122076

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 69    cacaaggactgaagaacaaaa 89
             |||||||||||||||||||||
Sbjct: 91551 cacaaggactgaagaacaaaa 91571
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>emb|BX649514.8| Zebrafish DNA sequence from clone CH211-232P6 in linkage group 4,
              complete sequence
          Length = 152488

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 126    atgaatacaaaagaagatact 146
              |||||||||||||||||||||
Sbjct: 102703 atgaatacaaaagaagatact 102723
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>gb|AC010072.5|AC010072 Homo sapiens chromosome 14q31 clone CTD-2173I4 containing TSHR gene,
             partial cds; and unknown gene, complete sequence
          Length = 124347

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 72    aaggactgaagaacaaaagac 92
             |||||||||||||||||||||
Sbjct: 23833 aaggactgaagaacaaaagac 23853
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>emb|BX649444.12| Zebrafish DNA sequence from clone DKEYP-27E10 in linkage group 4,
             complete sequence
          Length = 85097

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 126   atgaatacaaaagaagatact 146
             |||||||||||||||||||||
Sbjct: 15632 atgaatacaaaagaagatact 15652
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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 100     tcaaaattgaaaatgaagatt 120
               |||||||||||||||||||||
Sbjct: 2690211 tcaaaattgaaaatgaagatt 2690231
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>emb|CR848815.7| Zebrafish DNA sequence from clone CH211-197C11 in linkage group 15,
             complete sequence
          Length = 161902

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    atccagaataatacactgaaa 64
             |||||||||||||||||||||
Sbjct: 72479 atccagaataatacactgaaa 72459
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>emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chromosome 2, complete
              sequence
          Length = 224038

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 251    cattttcatgattcatgattg 271
              |||||||||||||||||||||
Sbjct: 206210 cattttcatgattcatgattg 206190
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>emb|AL732460.7| Mouse DNA sequence from clone RP23-113I19 on chromosome X, complete
             sequence
          Length = 198572

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 158   gcaaaatgataatattcacgacaatttaactatgtca 194
             |||||||||| |||| ||| | |||||||||||||||
Sbjct: 20012 gcaaaatgattatatgcactagaatttaactatgtca 20048
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>ref|XM_417954.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 1200009H11
           (LOC419818), mRNA
          Length = 1413

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 484 caaagttctgtgagaagatt 503
           ||||||||||||||||||||
Sbjct: 512 caaagttctgtgagaagatt 531
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>gb|AC140370.3| Mus musculus BAC clone RP24-75N6 from chromosome 7, complete sequence
          Length = 189786

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   aatacaaaagaagatactca 148
             ||||||||||||||||||||
Sbjct: 42564 aatacaaaagaagatactca 42583
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>emb|BX664703.21| Zebrafish DNA sequence from clone DKEYP-74A8 in linkage group 6, complete
              sequence
          Length = 193958

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    tgaatacaaaagaagatact 146
              ||||||||||||||||||||
Sbjct: 163379 tgaatacaaaagaagatact 163398
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>ref|XM_643567.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (414.t00005)
           partial mRNA
          Length = 588

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 450 aagtgattcgacaatgtcaa 469
           ||||||||||||||||||||
Sbjct: 450 aagtgattcgacaatgtcaa 469
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>ref|XM_644716.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (269.t00009)
           partial mRNA
          Length = 855

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 450 aagtgattcgacaatgtcaa 469
           ||||||||||||||||||||
Sbjct: 717 aagtgattcgacaatgtcaa 736
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>ref|XM_648378.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (82.t00004)
           partial mRNA
          Length = 855

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 450 aagtgattcgacaatgtcaa 469
           ||||||||||||||||||||
Sbjct: 717 aagtgattcgacaatgtcaa 736
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>ref|XM_648663.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (73.t00030)
           partial mRNA
          Length = 768

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 450 aagtgattcgacaatgtcaa 469
           ||||||||||||||||||||
Sbjct: 630 aagtgattcgacaatgtcaa 649
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>ref|XM_660450.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.10343)
            partial mRNA
          Length = 3963

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  caaaattgaaaatgaagatt 120
            ||||||||||||||||||||
Sbjct: 2777 caaaattgaaaatgaagatt 2758
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>gb|AY319521.1| Synthetic construct Bacteriophage SopE-Phi kanamycin cassette
            insertion derivative, complete sequence
          Length = 35155

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   ctcaaaattgaaaatgaaga 118
            ||||||||||||||||||||
Sbjct: 9576 ctcaaaattgaaaatgaaga 9595
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>emb|AL391318.21| Human DNA sequence from clone RP11-496H23 on chromosome 10, complete
             sequence
          Length = 45312

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 131   tacaaaagaagatactcaaatgac 154
             |||||||||||||| |||||||||
Sbjct: 30051 tacaaaagaagatattcaaatgac 30074
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>gb|AC090698.14| Homo sapiens chromosome 17, clone RP11-296K13, complete sequence
          Length = 87790

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   gcaaaatgataatattcacg 177
             ||||||||||||||||||||
Sbjct: 50672 gcaaaatgataatattcacg 50691
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>emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 in linkage group 1,
              complete sequence
          Length = 153891

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    tgaatacaaaagaagatact 146
              ||||||||||||||||||||
Sbjct: 138534 tgaatacaaaagaagatact 138553
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>emb|CR394534.6| Zebrafish DNA sequence from clone CH211-276A17 in linkage group 6,
            complete sequence
          Length = 153370

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  tgaatacaaaagaagatact 146
            ||||||||||||||||||||
Sbjct: 9489 tgaatacaaaagaagatact 9508
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>emb|CR392348.10| Zebrafish DNA sequence from clone DKEYP-51A12 in linkage group 13,
             complete sequence
          Length = 89943

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   tgaatacaaaagaagatact 146
             ||||||||||||||||||||
Sbjct: 78710 tgaatacaaaagaagatact 78691
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>gb|AC012310.5| Homo sapiens chromosome 19 clone CTC-518O7, complete sequence
          Length = 115767

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 237   cctcaacagtactccattttcatg 260
             |||||||||| |||||||||||||
Sbjct: 81440 cctcaacagttctccattttcatg 81417
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>gb|AC026337.29| Homo sapiens 2 BAC RP11-105E24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 171004

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   acaaaagaagatactcaaat 151
             ||||||||||||||||||||
Sbjct: 30996 acaaaagaagatactcaaat 30977
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>emb|BX569785.12| Zebrafish DNA sequence from clone DKEY-159F4 in linkage group 10,
             complete sequence
          Length = 140734

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   tgaatacaaaagaagatact 146
             ||||||||||||||||||||
Sbjct: 43795 tgaatacaaaagaagatact 43776
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>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA,
              complete genome
          Length = 2516575

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    aatcagcaattcaagcgttt 292
              ||||||||||||||||||||
Sbjct: 871749 aatcagcaattcaagcgttt 871768
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>ref|XM_628123.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd1_3070),
            partial mRNA
          Length = 11340

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  caaaattgaaaatgaagatt 120
            ||||||||||||||||||||
Sbjct: 8144 caaaattgaaaatgaagatt 8125
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>gb|AC026445.5| Homo sapiens chromosome 5 clone CTD-2306M10, complete sequence
          Length = 113087

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   attttcatgattcatgattg 271
             ||||||||||||||||||||
Sbjct: 23376 attttcatgattcatgattg 23357
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>gb|AC016564.6| Homo sapiens chromosome 5 clone CTC-538E9, complete sequence
          Length = 132573

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 516   attctgggcttcaaactcct 535
             ||||||||||||||||||||
Sbjct: 69749 attctgggcttcaaactcct 69768
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>emb|CR338830.1| Gallus gallus finished cDNA, clone ChEST974l3
          Length = 887

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 484 caaagttctgtgagaagatt 503
           ||||||||||||||||||||
Sbjct: 406 caaagttctgtgagaagatt 425
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>gb|AC021713.7|AC021713 Homo sapiens chromosome , clone RP11-63D14, complete sequence
          Length = 148648

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   caaaattgaaaatgaagatt 120
             ||||||||||||||||||||
Sbjct: 95907 caaaattgaaaatgaagatt 95888
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>gb|AC010420.11| Homo sapiens chromosome 5 clone CTD-2187J20, complete sequence
          Length = 88736

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  attttcatgattcatgattg 271
            ||||||||||||||||||||
Sbjct: 2466 attttcatgattcatgattg 2485
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>gb|AC018678.9| Homo sapiens BAC clone RP11-279E17 from 2, complete sequence
          Length = 169991

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   acaaaagaagatactcaaat 151
             ||||||||||||||||||||
Sbjct: 71249 acaaaagaagatactcaaat 71230
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>emb|BX470223.14| Zebrafish DNA sequence from clone DKEY-45P9 in linkage group 10,
             complete sequence
          Length = 247644

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   tgaatacaaaagaagatact 146
             ||||||||||||||||||||
Sbjct: 50876 tgaatacaaaagaagatact 50895
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>gb|AC147034.2| Mus musculus BAC clone RP23-189C2 from chromosome 7, complete sequence
          Length = 213581

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   aatacaaaagaagatactca 148
             ||||||||||||||||||||
Sbjct: 93764 aatacaaaagaagatactca 93783
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>emb|BX890617.13| Zebrafish DNA sequence from clone DKEYP-84F11 in linkage group 19,
              complete sequence
          Length = 182182

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    tgaatacaaaagaagatact 146
              ||||||||||||||||||||
Sbjct: 145066 tgaatacaaaagaagatact 145047
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>emb|BX465184.7| Zebrafish DNA sequence from clone DKEY-20N10 in linkage group 20,
             complete sequence
          Length = 139351

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   tgaatacaaaagaagatact 146
             ||||||||||||||||||||
Sbjct: 25758 tgaatacaaaagaagatact 25739
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>emb|BX005050.6| Zebrafish DNA sequence from clone CH211-11A11, complete sequence
          Length = 166695

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   tgaatacaaaagaagatact 146
             ||||||||||||||||||||
Sbjct: 88841 tgaatacaaaagaagatact 88822
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>emb|BX005067.6| Zebrafish DNA sequence from clone CH211-182K2 in linkage group 24,
              complete sequence
          Length = 162692

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    tgaatacaaaagaagatact 146
              ||||||||||||||||||||
Sbjct: 118093 tgaatacaaaagaagatact 118074
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>emb|AL772339.5| Zebrafish DNA sequence from clone CH211-139K23, complete sequence
          Length = 166809

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    tgaatacaaaagaagatact 146
              ||||||||||||||||||||
Sbjct: 115254 tgaatacaaaagaagatact 115235
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>gb|M79460.1|BACHYMEPR B.firmus hypothetical membrane protein and hypothetical lipoprotein,
            complete CDS's
          Length = 1200

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 107  tgaaaatgaagattgaggaa 126
            ||||||||||||||||||||
Sbjct: 1090 tgaaaatgaagattgaggaa 1109
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>dbj|AB026531.1| Lordiphosa pseudotenuicauda gene for alcohol dehydrogenase, partial
           cds
          Length = 820

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 277 agcaattcaagcgtttagtt 296
           ||||||||||||||||||||
Sbjct: 570 agcaattcaagcgtttagtt 551


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,237,755
Number of Sequences: 3902068
Number of extensions: 6237755
Number of successful extensions: 117145
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116924
Number of HSP's gapped (non-prelim): 221
length of query: 561
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 538
effective length of database: 17,143,297,704
effective search space: 9223094164752
effective search space used: 9223094164752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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