ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal37l18 |
|---|---|
| Clone Library Name | barley_pub |
>YPEB_SYNP2 (P42784) Hypothetical protein in petB 5'region (Fragment)| Length = 411 Score = 108 bits (271), Expect = 1e-23 Identities = 58/108 (53%), Positives = 75/108 (69%) Frame = -1 Query: 625 QSLTHDPLVVLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFI 446 Q LT PLVVLVN+ +ASASEILAGAL DNGRA+LVG KTFGKG IQS+ EL DG+ + + Sbjct: 293 QPLTDAPLVVLVNQATASASEILAGALQDNGRAMLVGEKTFGKGLIQSLFELPDGAGMAV 352 Query: 445 TVAKYLSPALHEIDHIGIQPDIQCTADALSLPRAPSLTESNEAASLEM 302 TVAKY +P H+I+ +GI PD + + S T+ A+L++ Sbjct: 353 TVAKYETPLHHDINKLGIMPDEVVPQEPIGYAMMGSETDLQYQAALDL 400
>CTPA_SYNY3 (Q55669) Carboxyl-terminal-processing protease precursor (EC| 3.4.21.102) Length = 427 Score = 101 bits (252), Expect = 2e-21 Identities = 55/108 (50%), Positives = 71/108 (65%) Frame = -1 Query: 625 QSLTHDPLVVLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFI 446 ++ T PLVVLVN+ +ASASEILAGAL DN RA LVG KTFGKG IQS+ EL DG+ + + Sbjct: 296 EAATDRPLVVLVNQGTASASEILAGALQDNQRATLVGEKTFGKGLIQSLFELSDGAGIAV 355 Query: 445 TVAKYLSPALHEIDHIGIQPDIQCTADALSLPRAPSLTESNEAASLEM 302 TVAKY +P H+I +GI PD +S S + A+L++ Sbjct: 356 TVAKYETPQHHDIHKLGIMPDEVVEQPLISFAEITSPADVQYQAALDL 403
>CTPA_BARBA (Q44879) Carboxy-terminal-processing protease precursor (EC| 3.4.21.102) (C-terminal-processing protease) Length = 434 Score = 77.4 bits (189), Expect = 3e-14 Identities = 38/76 (50%), Positives = 54/76 (71%) Frame = -1 Query: 607 PLVVLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYL 428 P++VL+N SASASEI+AGAL D+ RA ++G ++FGKG +Q++ L + AL +T A Y Sbjct: 283 PIIVLINGGSASASEIVAGALQDHRRATIIGTQSFGKGSVQTIIPLGENGALRLTTALYY 342 Query: 427 SPALHEIDHIGIQPDI 380 +P+ I IGI PDI Sbjct: 343 TPSGTSIQGIGITPDI 358
>CTPAL_STAHJ (Q4L6D0) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 73.6 bits (179), Expect = 5e-13 Identities = 38/72 (52%), Positives = 48/72 (66%) Frame = -1 Query: 598 VLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYLSPA 419 +LVNE SASASE+ GA+ D+ +A + G KTFGKG +Q+ E DGS L T K+L+P Sbjct: 321 ILVNEGSASASEVFTGAMRDHKKAKVYGSKTFGKGIVQTTREFKDGSLLKYTQMKWLTPD 380 Query: 418 LHEIDHIGIQPD 383 H I GIQPD Sbjct: 381 GHNIHGKGIQPD 392
>CTPAL_STAEQ (Q5HPB7) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 491 Score = 73.2 bits (178), Expect = 6e-13 Identities = 40/88 (45%), Positives = 56/88 (63%) Frame = -1 Query: 598 VLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYLSPA 419 +LVNE SASASE+ GA+ D +A + G KTFGKG +Q++ E DGS + T K+L+P Sbjct: 316 ILVNEGSASASEVFTGAMKDYHKAKVYGSKTFGKGIVQTIREFSDGSLIKYTEMKWLTPD 375 Query: 418 LHEIDHIGIQPDIQCTADALSLPRAPSL 335 H I GI+PD+ ++S P+ SL Sbjct: 376 GHYIHGKGIRPDV-----SISTPKYQSL 398
>CTPAL_STAAW (Q8NWR2) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 72.4 bits (176), Expect = 1e-12 Identities = 38/73 (52%), Positives = 48/73 (65%) Frame = -1 Query: 598 VLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYLSPA 419 +LVNE SASASE+ GAL D +A + G KTFGKG +Q+ E DGS L T K+L+P Sbjct: 321 ILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPD 380 Query: 418 LHEIDHIGIQPDI 380 H I GI+PD+ Sbjct: 381 GHYIHGKGIKPDV 393
>CTPAL_STAAS (Q6G9E1) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 72.4 bits (176), Expect = 1e-12 Identities = 38/73 (52%), Positives = 48/73 (65%) Frame = -1 Query: 598 VLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYLSPA 419 +LVNE SASASE+ GAL D +A + G KTFGKG +Q+ E DGS L T K+L+P Sbjct: 321 ILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPD 380 Query: 418 LHEIDHIGIQPDI 380 H I GI+PD+ Sbjct: 381 GHYIHGKGIKPDV 393
>CTPAL_STAAR (Q6GGY8) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 72.4 bits (176), Expect = 1e-12 Identities = 38/73 (52%), Positives = 48/73 (65%) Frame = -1 Query: 598 VLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYLSPA 419 +LVNE SASASE+ GAL D +A + G KTFGKG +Q+ E DGS L T K+L+P Sbjct: 321 ILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPD 380 Query: 418 LHEIDHIGIQPDI 380 H I GI+PD+ Sbjct: 381 GHYIHGKGIKPDV 393
>CTPAL_STAAN (Q7A5M9) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 72.4 bits (176), Expect = 1e-12 Identities = 38/73 (52%), Positives = 48/73 (65%) Frame = -1 Query: 598 VLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYLSPA 419 +LVNE SASASE+ GAL D +A + G KTFGKG +Q+ E DGS L T K+L+P Sbjct: 321 ILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPD 380 Query: 418 LHEIDHIGIQPDI 380 H I GI+PD+ Sbjct: 381 GHYIHGKGIKPDV 393
>CTPAL_STAAM (Q99U67) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 72.4 bits (176), Expect = 1e-12 Identities = 38/73 (52%), Positives = 48/73 (65%) Frame = -1 Query: 598 VLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYLSPA 419 +LVNE SASASE+ GAL D +A + G KTFGKG +Q+ E DGS L T K+L+P Sbjct: 321 ILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPD 380 Query: 418 LHEIDHIGIQPDI 380 H I GI+PD+ Sbjct: 381 GHYIHGKGIKPDV 393
>CTPAL_STAAC (Q5HG01) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 72.4 bits (176), Expect = 1e-12 Identities = 38/73 (52%), Positives = 48/73 (65%) Frame = -1 Query: 598 VLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYLSPA 419 +LVNE SASASE+ GAL D +A + G KTFGKG +Q+ E DGS L T K+L+P Sbjct: 321 ILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPD 380 Query: 418 LHEIDHIGIQPDI 380 H I GI+PD+ Sbjct: 381 GHYIHGKGIKPDV 393
>CTPAL_STAAB (Q2YXZ9) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 496 Score = 72.4 bits (176), Expect = 1e-12 Identities = 38/73 (52%), Positives = 48/73 (65%) Frame = -1 Query: 598 VLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYLSPA 419 +LVNE SASASE+ GAL D +A + G KTFGKG +Q+ E DGS L T K+L+P Sbjct: 321 ILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPD 380 Query: 418 LHEIDHIGIQPDI 380 H I GI+PD+ Sbjct: 381 GHYIHGKGIKPDV 393
>CTPAL_STAES (Q8CSK8) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 491 Score = 72.0 bits (175), Expect = 1e-12 Identities = 40/88 (45%), Positives = 55/88 (62%) Frame = -1 Query: 598 VLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYLSPA 419 +LVNE SASASE+ GA+ D +A + G KTFGKG +Q+ E DGS + T K+L+P Sbjct: 316 ILVNEGSASASEVFTGAMKDYHKAKVYGSKTFGKGIVQTTREFSDGSLIKYTEMKWLTPD 375 Query: 418 LHEIDHIGIQPDIQCTADALSLPRAPSL 335 H I GI+PD+ ++S P+ SL Sbjct: 376 GHYIHGKGIRPDV-----SISTPKYQSL 398
>CTPAL_STAS1 (Q49XN1) Probable ctpA-like serine protease (EC 3.4.21.-)| Length = 491 Score = 70.5 bits (171), Expect = 4e-12 Identities = 36/72 (50%), Positives = 47/72 (65%) Frame = -1 Query: 598 VLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYLSPA 419 +LVN+ SASASE+ GA+ D +A + G KTFGKG +Q+ E +DGS L T K+L+P Sbjct: 316 ILVNKGSASASEVFTGAMKDYNKAKVYGSKTFGKGIVQTTREFEDGSLLKFTNMKWLTPK 375 Query: 418 LHEIDHIGIQPD 383 H I GI PD Sbjct: 376 SHYIHGKGITPD 387
>PRC_SALTY (P43669) Tail-specific protease precursor (EC 3.4.21.102) (Protease| Re) (PRC protein) (C-terminal-processing peptidase) Length = 682 Score = 56.2 bits (134), Expect = 8e-08 Identities = 28/47 (59%), Positives = 34/47 (72%) Frame = -1 Query: 607 PLVVLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELD 467 PLVVLV+ SASASEI A A+ D GRA++VG TFGKG +Q L+ Sbjct: 441 PLVVLVDRFSASASEIFAAAMQDYGRALIVGEPTFGKGTVQQYRSLN 487
>PRC_ECOLI (P23865) Tail-specific protease precursor (EC 3.4.21.102) (Protease| Re) (PRC protein) (C-terminal-processing peptidase) Length = 682 Score = 55.8 bits (133), Expect = 1e-07 Identities = 28/47 (59%), Positives = 34/47 (72%) Frame = -1 Query: 607 PLVVLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELD 467 PLVVLV+ SASASEI A A+ D GRA++VG TFGKG +Q L+ Sbjct: 441 PLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLN 487
>PRC_HAEIN (P45306) Tail-specific protease precursor (EC 3.4.21.102) (Protease| Re) (C-terminal-processing peptidase) Length = 695 Score = 48.5 bits (114), Expect = 2e-05 Identities = 23/46 (50%), Positives = 30/46 (65%) Frame = -1 Query: 604 LVVLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELD 467 L V++N SASASEI A A+ D R I++G TFGKG +Q L+ Sbjct: 449 LFVMINRYSASASEIFAAAMQDYRRGIIIGQNTFGKGTVQQSRSLN 494
>Y858_CHLTR (O84866) Protein CT_858| Length = 601 Score = 38.5 bits (88), Expect = 0.016 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Frame = -1 Query: 607 PLVVLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYL 428 P+ VL+NE+ S ++ L DN RA++VG +T G G + + + + T + Sbjct: 480 PICVLINEQDFSCADFFPVVLKDNDRALIVGTRTAGAGGFVFNVQFPNRTGI-KTCSLTG 538 Query: 427 SPALHE----IDHIGIQPDI 380 S A+ E I++IG++P I Sbjct: 539 SLAVREHGAFIENIGVEPHI 558
>Y1016_CHLPN (Q9Z6P3) Protein CPn_1016/CP0837/CPj1016/CpB1054| Length = 619 Score = 36.6 bits (83), Expect = 0.062 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = -1 Query: 607 PLVVLVNEESASASEILAGALHDNGRAILVGHKTFGKG 494 PL +L++E+ S ++ L DNGRA L+G T G G Sbjct: 481 PLFMLIDEDDFSCGDLAPAILKDNGRATLIGKPTAGAG 518
>TRI1_STRCO (Q9RDE2) Tricorn protease homolog 1 (EC 3.4.21.-)| Length = 1067 Score = 32.7 bits (73), Expect = 0.89 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 4/129 (3%) Frame = -1 Query: 625 QSLTHDPLVVLVNEESASASEILAGALHDNGRAILVGHKTFGKG-RIQSVTELDDGSALF 449 Q P+V + NE S S +I+ A+ G +VG +T+G I S L DG+ Sbjct: 944 QDAPRGPVVAVANEFSGSDGDIVNAAIKALGIGPVVGVRTWGGVIGIDSRYRLVDGT--L 1001 Query: 448 ITVAKY---LSPALHEIDHIGIQPDIQCTADALSLPRAPSLTESNEAASLEMDSCIMVAE 278 IT KY L +++ G+ PD++ +P+ P + ++D I +A Sbjct: 1002 ITQPKYAFWLEGYGWGVENHGVDPDVE-------VPQRPQ--DHAAGRDPQLDEAIALAL 1052 Query: 277 QALEIQQSK 251 ALE +K Sbjct: 1053 AALEETPAK 1061
>IRBP_BOVIN (P12661) Interphotoreceptor retinoid-binding protein precursor (IRBP)| (Interstitial retinol-binding protein) (7S protein) Length = 1286 Score = 31.2 bits (69), Expect = 2.6 Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 3/95 (3%) Frame = -1 Query: 604 LVVLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYLS 425 +V+L + +A A+E + GRA+++G T G + +DD + L++T+ S Sbjct: 1137 MVILTSTLTAGAAEEFTYIMKRLGRALVIGEVTSGGCQPPQTYHVDD-TDLYLTIPTARS 1195 Query: 424 PALHE---IDHIGIQPDIQCTADALSLPRAPSLTE 329 + + +G+ PD+ A+A +L RA + + Sbjct: 1196 VGAADGSSWEGVGVVPDVAVPAEA-ALTRAQEMLQ 1229
>HTXB_PSEST (O69061) Probable phosphite transport system binding protein htxB| precursor Length = 298 Score = 30.0 bits (66), Expect = 5.8 Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 3/99 (3%) Frame = +3 Query: 231 TIYEAEPFDC*ISNACSATIMHESISRLAASLLSVSEGALGKDSASAVHCMSGWIPIWSI 410 TI E EP +++ AT S AA ++++ G H GW+ W Sbjct: 57 TIKEFEPIFKYLADQLGATYEIVSPESWAAISVAMTNG----------HVDVGWLGPWGY 106 Query: 411 SCS---AGERYFATVMNRAEPSSSSVTLCILPLPKVLWP 518 S AG ATV R EP ++ + LP WP Sbjct: 107 VLSNKKAGTEVLATVKYRGEPFYKALIVGRADLPIKKWP 145
>HISX_METTH (O26327) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 426 Score = 29.6 bits (65), Expect = 7.6 Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 3/120 (2%) Frame = -1 Query: 607 PLVVLVNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYL 428 P VLV + A ASEI + G A V +G I+ V ++ +F+T AK L Sbjct: 165 PDAVLVAADMAGASEI-----YRVGGAQAVAAMAYGTETIRPVDKIVGPGNIFVTAAKKL 219 Query: 427 SPALHEIDHIGIQPDIQCTADALSLPRAPSLTESNEAASLEMDSCIMVAEQ---ALEIQQ 257 +ID ++ AD + P +L +A + ++V + ALE+++ Sbjct: 220 VYGEVDIDFPAGPSEVLIIADETASPEYIALEILAQAEHDPQAASVLVTDSRDLALEVKE 279
>1A110_ARATH (Q9LQ10) Probable aminotransferase ACS10 (EC 2.6.1.-)| Length = 557 Score = 29.6 bits (65), Expect = 7.6 Identities = 15/35 (42%), Positives = 23/35 (65%) Frame = -1 Query: 622 SLTHDPLVVLVNEESASASEILAGALHDNGRAILV 518 S+T DP +++ ++SA EIL+ L D+G A LV Sbjct: 230 SVTFDPSQLVLTSGASSAIEILSFCLADSGNAFLV 264
>GPH_RHOCA (O33512) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)| Length = 219 Score = 29.3 bits (64), Expect = 9.9 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Frame = -1 Query: 463 GSALFITVAKYLSPALHEIDHIGIQPDIQCTADALSLP-RAPSLTESNEAAS-LEMDSCI 290 G + IT K PAL I H+G+ Q SLP R P+ NEA L + Sbjct: 104 GCPMAITTNKPYKPALAAIAHVGLTDYFQLVIGGDSLPTRKPNPEMVNEARRVLRRPHAL 163 Query: 289 MVAEQALEIQQSKGSAS*MVHY 224 + + ++ Q ++ + V Y Sbjct: 164 YIGDSEIDAQTAQNAGLPFVIY 185
>DP2S_THEAC (Q9HLK5) DNA polymerase II small subunit (EC 2.7.7.7) (Pol II)| Length = 488 Score = 29.3 bits (64), Expect = 9.9 Identities = 17/48 (35%), Positives = 24/48 (50%) Frame = -1 Query: 526 ILVGHKTFGKGRIQSVTELDDGSALFITVAKYLSPALHEIDHIGIQPD 383 I VG KTF K +++ GS + KYL + +D IG+ PD Sbjct: 239 IHVGSKTFRKNEFEAMVRWISGSDPDASRVKYLILSGDVVDGIGVYPD 286
>YYAH_BACSU (P37516) Hypothetical protein yyaH (ORFF)| Length = 126 Score = 29.3 bits (64), Expect = 9.9 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = -1 Query: 559 LAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITV 440 L L +G A++ G +T G G +SV E D+G+ + IT+ Sbjct: 87 LTDRLKADGFAVVNGPRTTGDGYYESVIEDDEGNLIEITI 126
>GBRA3_BOVIN (P10064) Gamma-aminobutyric-acid receptor alpha-3 subunit precursor| (GABA(A) receptor) Length = 492 Score = 29.3 bits (64), Expect = 9.9 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = -2 Query: 594 LSTKKVPVQAKFWLGHCMTMAVLFW*ATKPLAKEEYRVSQSWMMALLYS 448 L+ + VP + F + +TM L A L K Y + W MA+ Y+ Sbjct: 299 LNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYA 347
>IWS1_ASPFU (Q4WSM6) Transcription factor iws1| Length = 460 Score = 29.3 bits (64), Expect = 9.9 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +3 Query: 450 NRAEPSSSSVTLCILPLPKVLWPTRIARPLSCS 548 NRA P + + I+P P V+ ++ ARPL S Sbjct: 407 NRARPEITHTSYTIVPRPTVVQESKFARPLGAS 439
>YHID_ECOLI (P0AFV2) Hypothetical protein yhiD| Length = 215 Score = 29.3 bits (64), Expect = 9.9 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -1 Query: 463 GSALFITVAKYLSPALHEIDHIGIQP 386 GSALF+ V+KY + +DH+G+ P Sbjct: 41 GSALFMIVSKYGFADVLSLDHVGLDP 66
>YHID_ECO57 (P0AFV3) Hypothetical protein yhiD| Length = 215 Score = 29.3 bits (64), Expect = 9.9 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -1 Query: 463 GSALFITVAKYLSPALHEIDHIGIQP 386 GSALF+ V+KY + +DH+G+ P Sbjct: 41 GSALFMIVSKYGFADVLSLDHVGLDP 66
>GBRA3_RAT (P20236) Gamma-aminobutyric-acid receptor alpha-3 subunit precursor| (GABA(A) receptor) Length = 493 Score = 29.3 bits (64), Expect = 9.9 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = -2 Query: 594 LSTKKVPVQAKFWLGHCMTMAVLFW*ATKPLAKEEYRVSQSWMMALLYS 448 L+ + VP + F + +TM L A L K Y + W MA+ Y+ Sbjct: 299 LNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYA 347
>Y866_HAEIN (P44063) Hypothetical protein HI0866| Length = 207 Score = 29.3 bits (64), Expect = 9.9 Identities = 22/59 (37%), Positives = 28/59 (47%) Frame = -1 Query: 592 VNEESASASEILAGALHDNGRAILVGHKTFGKGRIQSVTELDDGSALFITVAKYLSPAL 416 + EE E L AL +A G K F +G S ++L DG+ LFI KYL L Sbjct: 63 LTEEKKVQVENLTNALDIAKKA---GIKDFSRGNNISDSKLADGTYLFILAEKYLQAQL 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,606,220 Number of Sequences: 219361 Number of extensions: 1716724 Number of successful extensions: 4798 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4680 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4796 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
