| Clone Name | rbaal38a10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds Length = 1285 Score = 174 bits (88), Expect = 4e-41 Identities = 101/105 (96%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 14 aacaggcgacgctgccggcangnacacacaccgaggagagacggcagatttgagaactat 73 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 1144 aacaggcgacgctgccggcaggcacacacaccgaggagagacggcagatttgagaactat 1085 Query: 74 tacagcgtgcgcggccgagacacgatncacg-tacgcgcgcacca 117 |||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1084 tacagcgtgcgcggccgagacacgatccacgttacgcgcgcacca 1040
>gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, complete cds Length = 1248 Score = 46.1 bits (23), Expect = 0.022 Identities = 30/33 (90%) Strand = Plus / Minus Query: 21 gacgctgccggcangnacacacaccgaggagag 53 ||||||| ||||| | ||||||||||||||||| Sbjct: 1111 gacgctgtcggcaggcacacacaccgaggagag 1079
>gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216676 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cagatttgagaactattaca 77 |||||||||||||||||||| Sbjct: 46344 cagatttgagaactattaca 46325
>gb|AC160029.3| Mus musculus 10 BAC RP24-105I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 184696 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cagatttgagaactattaca 77 |||||||||||||||||||| Sbjct: 18168 cagatttgagaactattaca 18187
>ref|XM_655149.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2637.2), mRNA Length = 1023 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 cgaggagagacggcagatt 63 ||||||||||||||||||| Sbjct: 912 cgaggagagacggcagatt 930
>emb|AL592114.13| Human DNA sequence from clone RP11-203F10 on chromosome 1 Contains the 5' end of the REN gene for renin, the KISS1 gene for KiSS-1 metastasis-suppressor, a novel gene (FLJ42654), the 3' end of the gene for phosphoinositol 3-phosphate-binding protein-3 (PEPP3) and a novel gene, complete sequence Length = 189023 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 gcagatttgagaactatta 75 ||||||||||||||||||| Sbjct: 109603 gcagatttgagaactatta 109585
>emb|AL355351.18| Human DNA sequence from clone RP11-337M11 on chromosome 6, complete sequence Length = 42047 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 ggcagatttgagaactatt 74 ||||||||||||||||||| Sbjct: 24615 ggcagatttgagaactatt 24633
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 38.2 bits (19), Expect = 5.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 aacaggcgacgctgccggc 32 ||||||||||||||||||| Sbjct: 1380460 aacaggcgacgctgccggc 1380478 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 382,164 Number of Sequences: 3902068 Number of extensions: 382164 Number of successful extensions: 24357 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24264 Number of HSP's gapped (non-prelim): 92 length of query: 119 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 98 effective length of database: 17,151,101,840 effective search space: 1680807980320 effective search space used: 1680807980320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)