| Clone Name | rbaal38a01 |
|---|---|
| Clone Library Name | barley_pub |
>GP133_HUMAN (Q6QNK2) Probable G-protein coupled receptor 133 precursor| (G-protein coupled receptor PGR25) Length = 874 Score = 36.6 bits (83), Expect = 0.073 Identities = 25/94 (26%), Positives = 42/94 (44%) Frame = -1 Query: 382 SRYFPSLVPTFTANPQIPPSAHRPLATMPLRQRKCI*HPIFILSYFYPCTIWRHLGSSFH 203 S PSL T TA+P +P A+ P+ T +RK P ILSY ++ Sbjct: 255 SSTLPSLFMTSTASPVMPTDAYHPIITNLTEERKTFQSPGVILSYLQNVSL--------- 305 Query: 202 QHLVPKKILFRYRFIKESSGFVQSTLKLIIQFGW 101 +P K L + + F+++ ++++ GW Sbjct: 306 --SLPSKSLSEQTALNLTKTFLKAVGEILLLPGW 337
>PGLR1_SCLSC (Q12708) Endo-polygalacturonase precursor (EC 3.2.1.15) (PG)| (Pectinase) Length = 380 Score = 35.8 bits (81), Expect = 0.12 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 12/73 (16%) Frame = -3 Query: 557 ISGITLKDMVGTNISVAGVLSGID------------GDPFTNICLSNINFTIADSAHSAS 414 +SG+T KD+ + I+ GV+ D G P T + LSN++ T++ SA + Sbjct: 288 VSGVTYKDITLSGITSYGVVIEQDYENGSPTGKPTSGVPITGVTLSNVHGTVSSSATNVY 347 Query: 413 WSCSNISGYSESV 375 C+ SG++ V Sbjct: 348 VLCAKCSGWTWDV 360
>PGLR2_ARATH (P49063) Exopolygalacturonase clone GBGA483 precursor (EC 3.2.1.67)| (ExoPG) (Pectinase) (Galacturan 1,4-alpha-galacturonidase) Length = 444 Score = 34.7 bits (78), Expect = 0.28 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -3 Query: 557 ISGITLKDMVGTNIS-VAGVLSGIDGDPFTNICLSNINFTIADSAHSASWSCSNISG-YS 384 +S +T+K + GT+ + VA L G P TNI LS+IN A +CSNI S Sbjct: 369 LSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILS 428 Query: 383 ESVFPEPCSDL 351 + P C+++ Sbjct: 429 GKLVPAACTEV 439
>CR3BB_BACTU (Q06117) Pesticidal crystal protein cry3Bb (Insecticidal| delta-endotoxin CryIIIB(b)) (Crystaline entomocidal protoxin) (74 kDa crystal protein) Length = 652 Score = 34.7 bits (78), Expect = 0.28 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -3 Query: 578 DPSALPVISGITLKDMVGTNISVAGVLSGIDGDPFTNICLS 456 + S+ V+ T+KD VGT ISV G + G+ G PF S Sbjct: 50 EDSSTEVLDNSTVKDAVGTGISVVGQILGVVGVPFAGALTS 90
>CR3BA_BACTO (P17969) Pesticidal crystal protein cry3Ba (Insecticidal| delta-endotoxin CryIIIB(a)) (Crystaline entomocidal protoxin) (75 kDa crystal protein) Length = 659 Score = 33.1 bits (74), Expect = 0.81 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = -3 Query: 560 VISGITLKDMVGTNISVAGVLSGIDGDPFTNICLS 456 V+ T+KD VGT ISV G + G+ G PF S Sbjct: 64 VLDSSTVKDAVGTGISVVGQILGVVGVPFAGALTS 98
>CAC1G_HUMAN (O43497) Voltage-dependent T-type calcium channel alpha-1G subunit| (Voltage-gated calcium channel alpha subunit Cav3.1) (Cav3.1c) (NBR13) Length = 2377 Score = 33.1 bits (74), Expect = 0.81 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = -1 Query: 391 DTPSRYFPSLVPTFTANPQIPPSAHRPLATMPLRQRKCI 275 D P P PT+ P++PP PLA PLR++ I Sbjct: 2098 DAPHLLQPHSAPTWGTIPKLPPPGRSPLAQRPLRRQAAI 2136
>CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alpha-1G subunit| (Voltage-gated calcium channel alpha subunit Cav3.1) Length = 2254 Score = 31.6 bits (70), Expect = 2.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -1 Query: 370 PSLVPTFTANPQIPPSAHRPLATMPLRQRKCI 275 P PT+ A P++PP PLA PLR++ I Sbjct: 1983 PHGAPTWGAIPKLPPPGRSPLAQRPLRRQAAI 2014
>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1906 Score = 30.0 bits (66), Expect = 6.9 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%) Frame = -3 Query: 677 YKGCDSIRCPKWKISMLQSKFTGDWSSHPGDHFDPSALPV-------ISGITLKDMVGTN 519 ++ C++ CPK K + + S G HFD + LP SGI +KD Sbjct: 599 FRSCNTDSCPKGKRDFREKQC----SDFDGKHFDINGLPPNVRWLPKYSGIAVKDRCKLY 654 Query: 518 ISVAGVLS 495 VAG S Sbjct: 655 CRVAGTTS 662
>DMXL1_MOUSE (Q6PNC0) Protein DmX-like 1 (X-like 1 protein)| Length = 3013 Score = 29.6 bits (65), Expect = 9.0 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 5/92 (5%) Frame = +1 Query: 415 EAECAESAMVKLILERQILVKGSPSIPDKTPAT----EMFVPTMSFRVIPLITGSAEGSK 582 E+E +SA K IL +++L GSP+ + + + F+ +M+ ++ + + E Sbjct: 1730 ESEFDKSATYKSILRKKVLGIGSPASELSSSSINAHHDPFLRSMAHWILEDYSAALETLI 1789 Query: 583 WSPG*LDQSPVNFD-CNMDIFHFGHLILSHPL 675 P D+ V CN +F+F + + +HPL Sbjct: 1790 KQPVTEDEDQVMMSACNPIVFNFYNYLRTHPL 1821 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,514,897 Number of Sequences: 219361 Number of extensions: 2259016 Number of successful extensions: 5714 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 5460 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5697 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)