ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal37k14 |
|---|---|
| Clone Library Name | barley_pub |
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 116 bits (290), Expect(2) = 7e-29 Identities = 55/106 (51%), Positives = 71/106 (66%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIE 384 YG G QTR+FQYVSDLV GL+ LM + P NLGNP E T+LE A+++++ + + I+ Sbjct: 290 YGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQ 349 Query: 383 FRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRI 246 F QDDP KRKPDI KAK LGWEP + L +GL + FRK + Sbjct: 350 FLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395 Score = 30.8 bits (68), Expect(2) = 7e-29 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = -1 Query: 618 RVVSNFVAQALRKEPLTV 565 RVVSNF+ QAL+ EPLTV Sbjct: 272 RVVSNFILQALQGEPLTV 289
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 116 bits (290), Expect(2) = 7e-29 Identities = 55/106 (51%), Positives = 71/106 (66%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIE 384 YG G QTR+FQYVSDLV GL+ LM + P NLGNP E T+LE A+++++ + + I+ Sbjct: 290 YGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQ 349 Query: 383 FRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRI 246 F QDDP KRKPDI KAK LGWEP + L +GL + FRK + Sbjct: 350 FLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395 Score = 30.8 bits (68), Expect(2) = 7e-29 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = -1 Query: 618 RVVSNFVAQALRKEPLTV 565 RVVSNF+ QAL+ EPLTV Sbjct: 272 RVVSNFILQALQGEPLTV 289
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 116 bits (290), Expect(2) = 7e-29 Identities = 55/106 (51%), Positives = 71/106 (66%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIE 384 YG G QTR+FQYVSDLV GL+ LM + P NLGNP E T+LE A+++++ + + I+ Sbjct: 290 YGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQ 349 Query: 383 FRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRI 246 F QDDP KRKPDI KAK LGWEP + L +GL + FRK + Sbjct: 350 FLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395 Score = 30.8 bits (68), Expect(2) = 7e-29 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = -1 Query: 618 RVVSNFVAQALRKEPLTV 565 RVVSNF+ QAL+ EPLTV Sbjct: 272 RVVSNFILQALQGEPLTV 289
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 116 bits (290), Expect(2) = 7e-29 Identities = 55/106 (51%), Positives = 71/106 (66%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIE 384 YG G QTR+FQYVSDLV GL+ LM + P NLGNP E T+LE A+++++ + + I+ Sbjct: 290 YGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQ 349 Query: 383 FRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRI 246 F QDDP KRKPDI KAK LGWEP + L +GL + FRK + Sbjct: 350 FLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395 Score = 30.8 bits (68), Expect(2) = 7e-29 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = -1 Query: 618 RVVSNFVAQALRKEPLTV 565 RVVSNF+ QAL+ EPLTV Sbjct: 272 RVVSNFILQALQGEPLTV 289
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 109 bits (273), Expect(2) = 5e-26 Identities = 51/106 (48%), Positives = 69/106 (65%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIE 384 YG G+QTR+FQYVSDLV GL+ LM + P NLGNP E ++++ A++++ + I Sbjct: 291 YGSGEQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEIS 350 Query: 383 FRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRI 246 F QDDP +RKPDI KAK LGWEP + L +GL + FRK + Sbjct: 351 FLSEAQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKEL 396 Score = 27.7 bits (60), Expect(2) = 5e-26 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = -1 Query: 618 RVVSNFVAQALRKEPLTV 565 RVVSNF+ QAL+ E LTV Sbjct: 273 RVVSNFILQALQGEQLTV 290
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 108 bits (271), Expect(2) = 8e-26 Identities = 51/106 (48%), Positives = 69/106 (65%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIE 384 YG G QTR+FQYVSDLV GL+ LM + P NLGNP E T+LE A++++ + + I+ Sbjct: 288 YGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQ 347 Query: 383 FRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRI 246 F QDDP +R+PDI KAK LGWEP + L +GL + F + + Sbjct: 348 FLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGLNKTIQYFSREL 393 Score = 27.7 bits (60), Expect(2) = 8e-26 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = -1 Query: 618 RVVSNFVAQALRKEPLTV 565 RVVSNF+ QAL+ E LTV Sbjct: 270 RVVSNFILQALQGEALTV 287
>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 1) (OsGME-1) Length = 378 Score = 65.1 bits (157), Expect = 2e-10 Identities = 35/95 (36%), Positives = 53/95 (55%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIE 384 +GDG QTRSF ++ + VEG++RL + D P N+G+ +M E+A+++ D I Sbjct: 237 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIH 296 Query: 383 FRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 + R D T KE+LGW P + L+DGL Sbjct: 297 HIPG-PEGVRGRNSDNTLIKEKLGWAPTMKLKDGL 330
>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 2) Length = 371 Score = 63.9 bits (154), Expect = 4e-10 Identities = 35/95 (36%), Positives = 53/95 (55%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIE 384 +GDG QTRSF ++ + VEG++RL + D P N+G+ +M E+A++V + I Sbjct: 230 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIH 289 Query: 383 FRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 + R D T KE+LGW P + L+DGL Sbjct: 290 HIPG-PEGVRGRNSDNTLIKEKLGWAPTMRLKDGL 323
>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man| 3,5-epimerase) Length = 377 Score = 60.5 bits (145), Expect = 4e-09 Identities = 33/95 (34%), Positives = 52/95 (54%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIE 384 +GDG QTRSF ++ + VEG++RL + D P N+G+ +M E+A++V + I Sbjct: 236 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH 295 Query: 383 FRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 + R D KE+LGW P + L++GL Sbjct: 296 HIPG-PEGVRGRNSDNNLIKEKLGWAPNMRLKEGL 329
>Y1055_METJA (Q58455) Hypothetical protein MJ1055| Length = 326 Score = 56.6 bits (135), Expect = 6e-08 Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDH-IGPFNLGNPGEFTMLELAKVVQDTIDPNARI 387 Y G R F Y+SD+V+G++R ++ D FNLGN ++ ++++ ++ A+ Sbjct: 214 YNYGNMERDFTYISDVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKK 273 Query: 386 EFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 +F D + D++K+++ LG++PK+ + +GL Sbjct: 274 KFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIEEGL 309
>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) Length = 328 Score = 53.5 bits (127), Expect = 5e-07 Identities = 29/99 (29%), Positives = 58/99 (58%), Gaps = 4/99 (4%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEG----DHIGPFNLGNPGEFTMLELAKVVQDTIDPN 396 +G G R F +V DL + ++ LM+ +H+ N+G+ E T+ ELA++V++ + Sbjct: 218 WGTGSPLREFLHVDDLADAVIFLMDHYSGLEHV---NVGSGSEVTIKELAELVKEVVGFQ 274 Query: 395 ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 ++ + + D ++ D +K +E +GW+PK+ L++GL Sbjct: 275 GKLVWDSSKPDGTPRKLMDSSKIQE-MGWKPKVPLKEGL 312
>ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 53.1 bits (126), Expect = 6e-07 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 21/111 (18%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLM--EGDHIGP--FNLGNP-GEFTMLELAKVVQDTIDPN-- 396 G+Q R F + D +E L R++ EGD N+GNP E ++ ELA ++ D+ D + Sbjct: 531 GQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPL 590 Query: 395 --------------ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRD 285 +R + + QD H RKP I A+ LGWEP IA+RD Sbjct: 591 RCHFPPFAGFQVVASRSYYGKGYQDVAH-RKPSIDNARRCLGWEPSIAMRD 640
>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) Length = 347 Score = 52.8 bits (125), Expect = 8e-07 Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 4/99 (4%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEG----DHIGPFNLGNPGEFTMLELAKVVQDTIDPN 396 +G G R F +V DL E ++ LME +H+ N+G+ E T+ ELA+ V+ + Sbjct: 234 WGSGAAAREFTHVDDLAEAVVVLMERYSGEEHV---NVGSGEEVTVRELAEAVRGVVGYE 290 Query: 395 ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 + + + +R D + ++ LGWEP++ALRDG+ Sbjct: 291 GVVAWDAARPEGVARRVVDSGRMRK-LGWEPRVALRDGI 328
>TGDS_MOUSE (Q8VDR7) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 52.0 bits (123), Expect = 1e-06 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 7/125 (5%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGP-FNLGNPGEFTMLELAK----VVQDTIDP 399 +G G Q R+F Y +D+VE + ++ G +N+G E ++++LAK ++++T Sbjct: 223 HGSGLQRRNFLYAADVVEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSE 282 Query: 398 NARIEFRENTQDDPHK--RKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGDQDSA 225 + + + D PH R P ++ LGW+PK+ +G+ V +RK F + +A Sbjct: 283 SETESWVDYVSDRPHNDMRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYRKN-FHNWKNA 341 Query: 224 ATATE 210 A E Sbjct: 342 EKALE 346
>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 52.0 bits (123), Expect = 1e-06 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 21/111 (18%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLM--EGDHIGP--FNLGNP-GEFTMLELAKVVQDTIDPN-- 396 G+Q R F + D +E L R++ +GD N+GNP E ++ ELA ++ D+ D + Sbjct: 531 GQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPL 590 Query: 395 --------------ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRD 285 +R + + QD H RKP I A+ LGWEP IA+RD Sbjct: 591 RCHFPPFAGFQVVESRSYYGKGYQDVAH-RKPSIDNARRCLGWEPSIAMRD 640
>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) (AtGER2) Length = 328 Score = 51.6 bits (122), Expect = 2e-06 Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 4/99 (4%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEG----DHIGPFNLGNPGEFTMLELAKVVQDTIDPN 396 +G G R F +V DL + + LM+ +H+ N+G+ E T+ ELA++V++ + Sbjct: 218 WGSGSPLREFLHVDDLADACVFLMDQYSGFEHV---NVGSGVEVTIKELAELVKEVVGFK 274 Query: 395 ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 ++ + + T+ D RK + LGW PKI+L+DGL Sbjct: 275 GKLVW-DTTKPDGTPRKLMDSSKLASLGWTPKISLKDGL 312
>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) (AtGER1) (AtFX) Length = 312 Score = 50.4 bits (119), Expect = 4e-06 Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 4/99 (4%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEG----DHIGPFNLGNPGEFTMLELAKVVQDTIDPN 396 +G G R F +V DL + + L++ +H+ N+G+ E T+ ELA++V++ + Sbjct: 204 WGTGSPLREFLHVDDLADACVFLLDRYSGLEHV---NIGSGQEVTIRELAELVKEVVGFE 260 Query: 395 ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 ++ + + T+ D RK + LGW PK++LRDGL Sbjct: 261 GKLGW-DCTKPDGTPRKLMDSSKLASLGWTPKVSLRDGL 298
>ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 50.4 bits (119), Expect = 4e-06 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 21/111 (18%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLM--EGDHIGP--FNLGNP-GEFTMLELAKVVQDTIDPN-- 396 G+Q R F + D +E L R++ EGD N+GNP E ++ ELA ++ D+ D + Sbjct: 531 GQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPL 590 Query: 395 --------------ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRD 285 +R + + QD H RKP I A+ L WEP IA+RD Sbjct: 591 RCHFPPFAGFQVVESRSYYGKGYQDVAH-RKPSIDNARRCLDWEPSIAMRD 640
>ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 50.4 bits (119), Expect = 4e-06 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 21/111 (18%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLM--EGDHIGP--FNLGNP-GEFTMLELAKVVQDTIDPN-- 396 G+Q R F + D +E L R++ EGD N+GNP E ++ ELA ++ D+ D + Sbjct: 531 GQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPL 590 Query: 395 --------------ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRD 285 +R + + QD H RKP I A+ L WEP IA+RD Sbjct: 591 RCHFPPFAGFQVVESRSYYGKGYQDVAH-RKPSIDNARRCLDWEPSIAMRD 640
>GALE_METJA (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 305 Score = 50.1 bits (118), Expect = 5e-06 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 1/100 (1%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVE-GLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARI 387 +GDG QTR F YV D+ + LM L + I N+G E ++ EL +++ I Sbjct: 200 FGDGNQTRDFVYVGDVAKANLMALNWKNEI--VNIGTGKETSVNELFDIIKHEIGFRGEA 257 Query: 386 EFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMV 267 + + + + ++ DI KA E LGW+P+I L++G+ +V Sbjct: 258 IYDKPREGEVYRIYLDIKKA-ESLGWKPEIDLKEGIKRVV 296
>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 350 Score = 48.5 bits (114), Expect = 2e-05 Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 7/111 (6%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGP-FNLGNPGEFTMLELAK-VVQDTIDPNAR 390 +G G QTR+F Y +D+VE + +++ G +N+G E ++++LAK ++Q + N+ Sbjct: 223 HGSGLQTRNFLYATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSE 282 Query: 389 IEFRE-----NTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRK 252 E N + R P ++ LGW PK+ ++G+ + +R+ Sbjct: 283 SEMENWVDYVNDRPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRE 333
>RFBB_XANCP (P55295) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 351 Score = 48.1 bits (113), Expect = 2e-05 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 11/106 (10%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIG-PFNLGNPGEFTMLELAKVVQDTID---PN 396 YGDGKQ R + +VSD E + ++ +G +N+G E +E+ + + +D P Sbjct: 215 YGDGKQVRDWLFVSDHCEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPR 274 Query: 395 ARIEFREN-----TQDDPHKRK--PDITKAKEQLGWEPKIALRDGL 279 + RE+ T H R+ D +K K++LGWEP G+ Sbjct: 275 EDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGI 320
>ACBB_ACTS5 (Q9ZAE8) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 341 Score = 47.0 bits (110), Expect = 4e-05 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 2/105 (1%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGP-FNLGNPGEFTMLELAKVVQDTIDPN-AR 390 YGDG+ R + +VSD GL + G +++G E T LEL +++ + +R Sbjct: 209 YGDGRNIRDWLHVSDHCRGLALALGAGRAGEVYHIGGGWEATNLELTEILLEACGARRSR 268 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFR 255 I F + + + D +K +LG+ P++ DG+ V +R Sbjct: 269 ISFVTDRKGHDRRYSLDYSKIAGELGYRPRVDFTDGIAETVAWYR 313
>Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF| Length = 314 Score = 46.6 bits (109), Expect = 6e-05 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 4/99 (4%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLM----EGDHIGPFNLGNPGEFTMLELAKVVQDTIDPN 396 +G G TR F Y D + L+ L+ E +HI N+G+ GE +++ELA +V + Sbjct: 206 WGSGTPTRDFLYSEDCSDALVFLLKHYSETEHI---NIGSGGEISIIELAHIVCRVVGFK 262 Query: 395 ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 I F + ++ D RK ++ +GW PK +L GL Sbjct: 263 GDIVF-DTSKPDGTPRKLLSSERLVSMGWRPKTSLELGL 300
>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC| 1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose synthase MUM4) Length = 667 Score = 44.7 bits (104), Expect = 2e-04 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 3/98 (3%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIG-PFNLGNPGEFTMLELAKVVQDTI--DPNA 393 +GDG RS+ Y D+ E ++ IG +N+G E ++++A+ + DP + Sbjct: 218 HGDGSNVRSYLYCEDVAEAFEVVLHKGEIGHVYNVGTKRERRVIDVARDICKLFGKDPES 277 Query: 392 RIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 I+F EN + + D K K +LGW+ + DGL Sbjct: 278 SIQFVENRPFNDQRYFLDDQKLK-KLGWQERTNWEDGL 314
>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) Length = 321 Score = 43.9 bits (102), Expect = 4e-04 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 10/105 (9%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDH----------IGPFNLGNPGEFTMLELAKVVQ 414 +G G R F +V D+ + +ME H + N+G + T+ ELA+ + Sbjct: 202 WGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIA 261 Query: 413 DTIDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 + R+ F + D ++ D+T+ QLGW +I+L GL Sbjct: 262 KVVGYKGRVVFDASKPDGTPRKLLDVTRL-HQLGWYHEISLEAGL 305
>ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 654 Score = 43.5 bits (101), Expect = 5e-04 Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 20/120 (16%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEGLMRLMEGDHIGP----FNLGNP-GEFTMLELAKVVQDTIDPNA 393 +G Q R F + D +E L +++ + N+GNP E+T+++L K++ + I N Sbjct: 529 NGNQKRCFTDIDDGIEALFEIIKNKNNKCNKKIINIGNPHNEYTIMQLTKIIINIIYSNN 588 Query: 392 R---------------IEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDF 258 R + D +RKP+I AK+ L W PK +R L ++ F Sbjct: 589 RNYNFPKFSGFNMLSGTNYYGEGYQDIDRRKPNIDIAKKLLNWTPKTKIRITLRKIINFF 648
>GALE_BACSU (P55180) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 339 Score = 43.5 bits (101), Expect = 5e-04 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 4/95 (4%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEG----LMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNAR 390 DG R + +V DL EG L +++ +NLG +++LE+ K + Sbjct: 225 DGTGVRDYIHVVDLAEGHVKALEKVLNSTGADAYNLGTGTGYSVLEMVKAFEKVSGKEVP 284 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRD 285 F + D D KAK +LGWE K L + Sbjct: 285 YRFADRRPGDIATCFADPAKAKRELGWEAKRGLEE 319
>RFFG_HAEIN (P44914) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 338 Score = 43.5 bits (101), Expect = 5e-04 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 13/108 (12%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGP-FNLGNPGEFTMLELAKVVQDTIDPNA-- 393 YGDG+Q R + +V D V+ ++ +G +N+G E T LE+ K + ++ A Sbjct: 217 YGDGQQIRDWLFVEDHVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPS 276 Query: 392 ---RIEFREN----TQDDPH---KRKPDITKAKEQLGWEPKIALRDGL 279 I++ E+ +D P + D +K +LGW+P+I GL Sbjct: 277 KPNHIKYYEDLMTFVKDRPGHDVRYSLDCSKIHAELGWQPQITFEQGL 324
>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 669 Score = 43.1 bits (100), Expect = 6e-04 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 3/98 (3%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIG-PFNLGNPGEFTMLELAKVVQD--TIDPNA 393 +GDG RS+ Y D+ E ++ +G +N+G E + ++AK + +DP A Sbjct: 216 HGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEA 275 Query: 392 RIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 I+F +N + + D K K +LGW + +GL Sbjct: 276 NIKFVDNRPFNDQRYFLDDQKLK-KLGWSERTTWEEGL 312
>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 328 Score = 42.7 bits (99), Expect = 8e-04 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 2/106 (1%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGP-FNLGNPGEFTMLELAKVVQDTIDPN-AR 390 YGDG R + +V D V G+ + G +N+G + EL ++ + + Sbjct: 207 YGDGLNVREWLHVDDHVRGIEAVRTRGRAGRVYNIGGGATLSNKELVGLLLEAAGADWGS 266 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRK 252 +E+ E+ + + D T+ + +LG+ P + L DGL V + K Sbjct: 267 VEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDLADGLAATVAWYHK 312
>GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 330 Score = 40.8 bits (94), Expect = 0.003 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEG----LMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNAR 390 DG R + V DL++ L +M+ + FNLG ++ LE+ + + + Sbjct: 216 DGTNVRDYVQVEDLIDAHILALKHMMKTNKSDVFNLGTAHGYSNLEILESAKKVTGIDIP 275 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGWEPK 300 DP D TKA+ LGW+PK Sbjct: 276 YTMGPRRGGDPDSLVADSTKARTVLGWKPK 305
>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 664 Score = 40.8 bits (94), Expect = 0.003 Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 3/98 (3%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGL-MRLMEGDHIGPFNLGNPGEFTMLELAKVVQDT--IDPNA 393 +GDG RS+ Y D+ E + L +G+ +N+G E ++++A + IDP++ Sbjct: 216 HGDGSNVRSYLYCEDVAEAFEVVLHKGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDS 275 Query: 392 RIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 I++ EN + + D K K +LGW + +GL Sbjct: 276 TIQYVENRPFNDQRYFLDDQKLK-KLGWCERTNWEEGL 312
>CAPI_STAAU (P39858) Protein capI| Length = 334 Score = 39.7 bits (91), Expect = 0.007 Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 19/114 (16%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLME----------------GDHIGP---FNLGNPGEFT 441 Y G R F YV D+VE + RL++ G P +N+GN Sbjct: 208 YNHGNMMRDFTYVDDIVEAISRLVKKPASPNKEWSGADPDPGSSYAPYKVYNIGNNSPVR 267 Query: 440 MLELAKVVQDTIDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 ++E + +++ + AR + + D + ++ + ++P+ ++DG+ Sbjct: 268 LMEFVEAIENKLGKEARKNYMDLQPGDVPETYANVDDLFRDIDFKPETTIQDGV 321
>EXOB_RHIME (P26503) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| Length = 328 Score = 39.7 bits (91), Expect = 0.007 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 4/93 (4%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEGLMR----LMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNAR 390 DG R + +V DL + +R L+EG NLG T+ EL ++ Sbjct: 218 DGTCVRDYIHVLDLADAHVRAVDYLLEGGESVALNLGTGTGTTVKELLDAIEKVAKRPFN 277 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGWEPKIAL 291 I + E + D + KA++ LGWEP+ L Sbjct: 278 IGYAERREGDSTTLVANNDKARQVLGWEPQYDL 310
>GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 334 Score = 39.3 bits (90), Expect = 0.009 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 4/90 (4%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEG----LMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNAR 390 DG R + +V DL L + G FNLGN F++ E+ +V + Sbjct: 215 DGSCIRDYIHVMDLANAHYLACEHLRKDGQSGSFNLGNGKGFSVKEVIEVCRQVTGHPIP 274 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGWEPK 300 E DP KA+ LGWEPK Sbjct: 275 AEIAPRRSGDPASLIASSEKAQTILGWEPK 304
>ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 39.3 bits (90), Expect = 0.009 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 23/113 (20%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLME-------GDHIGPFNLGNP-GEFTMLELAKVVQDTID- 402 GKQ R F + D +E L R++E G+ I N+GNP E ++ EL +++ + + Sbjct: 531 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEII---NIGNPENEASIEELGEMLLASFEK 587 Query: 401 --------PNARIEFRENTQ------DDPHKRKPDITKAKEQLGWEPKIALRD 285 P A E++ D RKP I A+ L WEPKI +++ Sbjct: 588 HPLRHYFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQE 640
>EXOB_RHILT (Q59745) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose| 4-epimerase) (Galactowaldenase) Length = 327 Score = 38.9 bits (89), Expect = 0.012 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 5/96 (5%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEGLMRLME-----GDHIGPFNLGNPGEFTMLELAKVVQDTIDPNA 393 DG R + +V DL + +R +E GD + NLG T+ EL +++ + Sbjct: 218 DGTCVRDYIHVLDLADAHVRAVEYLLKGGDSVA-LNLGTGTGTTVKELLGAIEEVSNRPF 276 Query: 392 RIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRD 285 +E+ + D H + KA++ LGW P+ L + Sbjct: 277 PVEYIGRREGDSHTLVANNDKARDVLGWVPQYDLSE 312
>ARNA_ERWCT (Q6D2F1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 673 Score = 38.9 bits (89), Expect = 0.012 Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 21/137 (15%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLME---GDHIGPF-NLGNP-GEFTMLELAKVVQDT------ 408 G Q R F + D +E L R++E G G N+GNP E ++ EL +++ + Sbjct: 538 GAQKRCFTDIHDGIEALFRVIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPL 597 Query: 407 ----------IDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDF 258 ID + + + QD H R P I AK L WEP + + + + F Sbjct: 598 RDRFPPFAGFIDVESSSYYGKGYQDVAH-RTPSIRNAKRLLEWEPTVKMEQTVAETLDYF 656 Query: 257 RKRIFGDQDSAATATEG 207 + + + AT T+G Sbjct: 657 LRTVDVPHTADATDTQG 673
>RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-tyvelose| 2-epimerase) Length = 338 Score = 38.5 bits (88), Expect = 0.016 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 5/102 (4%) Frame = -2 Query: 560 GDGKQTRSFQYVSDLVEGLMRLMEGDHI---GPFNLGNP--GEFTMLELAKVVQDTIDPN 396 G+GKQ R + D++ + FN+G ++LEL K+++D + + Sbjct: 230 GNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNID 289 Query: 395 ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLM 270 R + D DI K + W PK++ +DG+ M Sbjct: 290 MRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKM 331
>GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) (GDP-D-mannose| dehydratase 1) (GMD 1) Length = 361 Score = 38.5 bits (88), Expect = 0.016 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 4/106 (3%) Frame = -2 Query: 566 FYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPN--- 396 F G+ + +R + + D VE + +++ + + + T+ E V + N Sbjct: 233 FLGNIQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVKEFLDVSFGYVGLNWKD 292 Query: 395 -ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTD 261 I+ R + K D +KAKE LGW+PK+ + +MV + Sbjct: 293 HVEIDKRYFRPTEVDNLKGDASKAKEMLGWKPKVGFEKLVKMMVDE 338
>ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 38.1 bits (87), Expect = 0.021 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 24/113 (21%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLME-------GDHIGPFNLGNP-GEFTMLELAKVVQDTIDP 399 G+Q R F ++D +E L R++E G I N+GNP E ++ +LA+++ D+ + Sbjct: 531 GEQKRCFTDINDGIEALFRIIENREGLCDGQII---NIGNPTNEASIRQLAEILLDSFED 587 Query: 398 NA------------RIE----FRENTQDDPHKRKPDITKAKEQLGWEPKIALR 288 + ++E + + QD H RKP I A+ L W+P I ++ Sbjct: 588 HELRDHFPPFAGFKKVESGSYYGKGYQDVEH-RKPSIKNAERLLDWKPTIDMK 639
>ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 38.1 bits (87), Expect = 0.021 Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 23/113 (20%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLME-------GDHIGPFNLGNP-GEFTMLELAKVVQDTID- 402 GKQ R F + D +E L R++E G+ I N+GNP E ++ EL +++ + + Sbjct: 531 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEII---NIGNPENEASIEELGEMLLASFEK 587 Query: 401 --------PNARIEFRENTQ------DDPHKRKPDITKAKEQLGWEPKIALRD 285 P A E++ D RKP I A L WEPKI +++ Sbjct: 588 HPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQE 640
>ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 38.1 bits (87), Expect = 0.021 Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 23/113 (20%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLME-------GDHIGPFNLGNP-GEFTMLELAKVVQDTID- 402 GKQ R F + D +E L R++E G+ I N+GNP E ++ EL +++ + + Sbjct: 531 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEII---NIGNPENEASIEELGEMLLASFEK 587 Query: 401 --------PNARIEFRENTQ------DDPHKRKPDITKAKEQLGWEPKIALRD 285 P A E++ D RKP I A L WEPKI +++ Sbjct: 588 HPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHHCLDWEPKIDMQE 640
>GALE_CORGL (Q45291) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 329 Score = 37.7 bits (86), Expect = 0.027 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 3/89 (3%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEGLMRLMEGDHIGP---FNLGNPGEFTMLELAKVVQDTIDPNARI 387 DG R + ++ DL + + +E + G FNLG+ +++ ++ ++ ++ Sbjct: 212 DGTAVRDYIHILDLAKAHVLALESNEAGKHRIFNLGSGDGYSVKQVVEMCREVTGHPIPA 271 Query: 386 EFRENTQDDPHKRKPDITKAKEQLGWEPK 300 E DP KAK++LGW P+ Sbjct: 272 EVAPRRAGDPATLIASSEKAKQELGWTPE 300
>EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose| 4-epimerase) (Galactowaldenase) Length = 348 Score = 37.4 bits (85), Expect = 0.035 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 4/97 (4%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEG----LMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNAR 390 DG R + +VSDL + L+ L G N G ++ E+ + +++ Sbjct: 224 DGTCIRDYIHVSDLADAHVLALLHLRRGGGSLLMNCGYGRGASVREVVRTLEEVSGEQVP 283 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 F + DP + + +EQLGW PK DG+ Sbjct: 284 ATFADRRPGDPPQLVAGADRIREQLGWVPKHDRLDGI 320
>RFBB_SHIFL (P37777) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 37.4 bits (85), Expect = 0.035 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 9/104 (8%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLM-EGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARI 387 YG G Q R + YV D L ++ EG +N+G E +++ + D +D Sbjct: 224 YGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPK 283 Query: 386 E--FREN---TQDDP-HKRKP--DITKAKEQLGWEPKIALRDGL 279 E +RE D P H R+ D K +LGW+P+ G+ Sbjct: 284 EKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESGI 327
>RFBB_SALTY (P26391) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 37.4 bits (85), Expect = 0.035 Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 10/105 (9%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGL-MRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTID---PN 396 YG G Q R + YV D L M + EG +N+G E L++ + D +D P Sbjct: 224 YGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPK 283 Query: 395 ARIEFREN---TQDDP-HKRKP--DITKAKEQLGWEPKIALRDGL 279 A +RE D P H R+ D K +LGW+P G+ Sbjct: 284 AT-SYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGI 327
>GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 333 Score = 37.4 bits (85), Expect = 0.035 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 4/90 (4%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEG----LMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNAR 390 DG R + + DL + L L +G+ FNLG+ F+ L++ + + Sbjct: 218 DGTNVRDYVHPFDLADAHLLALNYLRQGNPSTAFNLGSSTGFSNLQILEAARKVTGQKIP 277 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGWEPK 300 E DP KA+E LGW+P+ Sbjct: 278 AEKAARRSGDPDTLIASSEKAREVLGWKPQ 307
>RFBB2_ECOLI (P55293) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 37.0 bits (84), Expect = 0.046 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 9/104 (8%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLM-EGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARI 387 YG G Q R + YV D L ++ EG +N+G E +++ + D +D Sbjct: 224 YGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPK 283 Query: 386 E--FREN---TQDDP-HKRKP--DITKAKEQLGWEPKIALRDGL 279 E +RE D P H R+ D K +LGW+P+ G+ Sbjct: 284 EKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESGI 327
>GALE_YERPE (Q9F7D4) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 338 Score = 36.6 bits (83), Expect = 0.061 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 4/87 (4%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEGLMRLMEGDHIGP----FNLGNPGEFTMLELAKVVQDTIDPNAR 390 DG R + +V DL +G + M+ H P FNLG ++L++ Sbjct: 226 DGTGVRDYIHVVDLADGHVAAMKTLHGKPGVHIFNLGAGVGHSVLQVVAAFSKACGKPLA 285 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGW 309 F + D D TKA EQLGW Sbjct: 286 YHFAPRREGDLPAYWADATKAAEQLGW 312
>RMLB_STRMU (P95780) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 348 Score = 36.2 bits (82), Expect = 0.079 Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGP-FNLGNPGEFTMLELAKVVQDTID-PNAR 390 YG+GK R + + +D G+ ++ IG + +G GE E+ +++ + + P Sbjct: 218 YGEGKNVRDWIHTNDHSTGVWAILTKGRIGETYLIGADGEKNNKEVLELILEKMSQPKNA 277 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGWEPK 300 + + + D TK +E+LGW+P+ Sbjct: 278 YDHVTDRAGHDLRYAIDSTKLREELGWKPQ 307
>GALE_NEIGO (Q05026) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 338 Score = 36.2 bits (82), Expect = 0.079 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEGLMRLME------GDHIGPFNLGNPGEFTMLELAKVVQDTIDPN 396 DG R + +V DL EG + M+ G H+ FNLG+ +++LE+ + + + Sbjct: 226 DGTGMRDYIHVMDLAEGHIAAMKAKGGVAGVHL--FNLGSGRAYSVLEIIRAFEAASGLH 283 Query: 395 ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALR 288 + D D + K+Q GWE K L+ Sbjct: 284 IPYRIQPRRAGDLACSYADPSHTKQQTGWETKRGLQ 319
>ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 35.8 bits (81), Expect = 0.10 Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 24/114 (21%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLME-------GDHIGPFNLGNP-GEFTMLELAKVVQDTID- 402 GKQ R F + D +E L ++E G+ I N+GNP E ++ EL +++ + + Sbjct: 531 GKQKRCFTDIRDGIEALYHIIENAGNRCDGEII---NIGNPENEASIEELGEMLLASFEK 587 Query: 401 --------PNARIEFRENT-------QDDPHKRKPDITKAKEQLGWEPKIALRD 285 P A E++ QD H RKP I A L WEPKI +++ Sbjct: 588 HPLRHHFPPFAGFRVVESSCYYGKGYQDVEH-RKPSIRNAHRCLDWEPKIDMQE 640
>ARNA_YERPS (Q93PD8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 667 Score = 35.8 bits (81), Expect = 0.10 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLME---GDHIGPF-NLGNP-GEFTMLELAKVV--------- 417 G Q R F + D +E L R++E G G N+GNP E ++ ELA+++ Sbjct: 531 GAQKRCFTDIHDGIEALFRIIENRDGCCDGQIINIGNPTNEASIRELAEMLLTSFENHEL 590 Query: 416 QDTIDPNARIEFRENTQ------DDPHKRKPDITKAKEQLGWEPKIALR 288 +D P A + E++ D R P I A+ L W+P+IA++ Sbjct: 591 RDHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQ 639
>GALE_LACCA (O84903) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 331 Score = 35.4 bits (80), Expect = 0.13 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 4/89 (4%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEG----LMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNAR 390 DG R + +V DL + L L G+ FN+G+ F+ LE+ + Sbjct: 216 DGTNVRDYVHVVDLADAHILALKYLDAGNKSSAFNIGSAHGFSNLEILNAARKVTGQEIP 275 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGWEP 303 DP KA++ LGW+P Sbjct: 276 ATMGPRRAGDPSTLIASSEKARDILGWKP 304
>ARNA_YERPE (Q8ZDX8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 667 Score = 35.4 bits (80), Expect = 0.13 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 20/109 (18%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLME---GDHIGPF-NLGNP-GEFTMLELAKVV--------- 417 G Q R F + D +E L R++E G G N+GNP E ++ ELA+++ Sbjct: 531 GAQKRCFTDIHDGIEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFENHEL 590 Query: 416 QDTIDPNARIEFRENTQ------DDPHKRKPDITKAKEQLGWEPKIALR 288 +D P A + E++ D R P I A+ L W+P+IA++ Sbjct: 591 RDHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQ 639
>ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 668 Score = 35.0 bits (79), Expect = 0.18 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 21/114 (18%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHI----GPFNLGNP-GEFTMLELAKVVQDTI-- 405 + G+Q R F ++D +E L R+++ ++ N+GNP E ++ +L + + Sbjct: 530 FDGGEQKRCFTDIADGIEALARIVDNENDCCNGQIINIGNPDNEASIRQLGEELLRQFEA 589 Query: 404 --------------DPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRD 285 D ++ + QD H RKP I AK L WEP + + + Sbjct: 590 HPLRGNFPPFAGFRDVESKAFYGAGYQDVEH-RKPSIDNAKRLLNWEPTVEMSE 642
>Y4NL_RHISN (P55584) Hypothetical 38.7 kDa protein y4nL| Length = 356 Score = 35.0 bits (79), Expect = 0.18 Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 33/127 (25%) Frame = -2 Query: 560 GDGKQTRSFQYVSDLVEGLMRLMEGDHIGP--FNLGNPGEFTMLELAKVV-----QD--- 411 G G+ RS Y +L +G++ + F L + +TM E+ +VV +D Sbjct: 216 GSGRNRRSMGYTDNLAQGILLAAVHERAAGDIFWLADETPYTMNEIIEVVGMVLHEDFGM 275 Query: 410 TIDPN----------------ARIEFRENTQDDPHKRKP-------DITKAKEQLGWEPK 300 T+ PN A +++ H DITKA++ LG+ PK Sbjct: 276 TVKPNPFRLPDIVGGAATILDATLQYAGIYHQKIHVLSEMNKTIACDITKARKVLGYAPK 335 Query: 299 IALRDGL 279 IALR+G+ Sbjct: 336 IALREGM 342
>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 662 Score = 35.0 bits (79), Expect = 0.18 Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 21/132 (15%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLME---GDHIGPF-NLGNP-GEFTMLELAKVVQDTIDPN-- 396 G Q R F V D +E L R+++ G G N+GNP E ++ +L + + + + Sbjct: 532 GAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEAHPL 591 Query: 395 --------------ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDF 258 +R + + QD H RKP I A+ L W+P I LR+ + + F Sbjct: 592 RAQFPPFAGFREVESRSFYGDGYQDVAH-RKPSIDNARRLLDWQPTIELRETIGKTLDFF 650 Query: 257 RKRIFGDQDSAA 222 ++++ A Sbjct: 651 LHEALREREAQA 662
>GALE_STRTR (P21977) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 332 Score = 34.7 bits (78), Expect = 0.23 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 4/90 (4%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEGLMRLME----GDHIGPFNLGNPGEFTMLELAKVVQDTIDPNAR 390 DG R + + DL + + +E G+ FNLG+ F+ L++ + + Sbjct: 217 DGTNVRDYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNLQILEAARKVTGKEIP 276 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGWEPK 300 E + DP KA+ LGW+P+ Sbjct: 277 AEKADRRPGDPDILIASSEKARTVLGWKPQ 306
>ARAE2_ARATH (O64749) Putative UDP-arabinose 4-epimerase 2 (EC 5.1.3.5)| (UDP-D-xylose 4-epimerase 2) Length = 417 Score = 34.7 bits (78), Expect = 0.23 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 3/89 (3%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEGLMRLMEGDH---IGPFNLGNPGEFTMLELAKVVQDTIDPNARI 387 DG R + V+DLV+ ++ +E +G FN+G ++ E + + + ++ Sbjct: 298 DGTCVRDYIDVTDLVDAHVKALEKAKPRKVGIFNVGTGKGSSVKEFVEACKKATGVDIKV 357 Query: 386 EFRENTQDDPHKRKPDITKAKEQLGWEPK 300 ++ E D + D K KE+L W K Sbjct: 358 DYLERRAGDYAEVYSDPRKIKEELNWTAK 386
>LPSL_RHIME (O54067) UDP-glucuronate 5'-epimerase (EC 5.1.3.12) (UDP-glucuronic| acid epimerase) Length = 341 Score = 34.3 bits (77), Expect = 0.30 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIGP 471 YG+G+ +R F Y+ DLVE ++RL H+ P Sbjct: 209 YGEGRMSRDFTYIDDLVESIVRL---SHVPP 236
>VIPB_SALTI (Q04973) Vi polysaccharide biosynthesis protein vipB/tviC| Length = 348 Score = 33.9 bits (76), Expect = 0.39 Identities = 23/104 (22%), Positives = 51/104 (49%), Gaps = 10/104 (9%) Frame = -2 Query: 560 GDGKQTRSFQYVSDLVEGLMRLMEGDHIGP----FNLGNPGEFTMLELAKVVQDTID--- 402 GDG +R F Y+ ++++ + + + +N+ ++ EL +++D ++ Sbjct: 227 GDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWR 286 Query: 401 -PNARIE--FRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 +R E +++ D + DITK K L +EP+ +++GL Sbjct: 287 NEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGL 330
>ARNT_HUMAN (P27540) Aryl hydrocarbon receptor nuclear translocator (ARNT| protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta) Length = 789 Score = 33.5 bits (75), Expect = 0.51 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = -3 Query: 298 SPSVTASPSWLPTSASGYSATRIAXXXXPKASKE*TGVQYYE 173 +P+ A+P+W PT+ SG+SA ++A K GV ++ Sbjct: 630 NPTQGATPTWTPTTRSGFSAQQVATQATAKTRTSQFGVGSFQ 671
>ARNA_PSE14 (Q48HZ1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 663 Score = 33.5 bits (75), Expect = 0.51 Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 21/111 (18%) Frame = -2 Query: 554 GKQTRSFQYVSDLVEGLMRLME---GDHIGPF-NLGNP---------GEFTMLEL-AKVV 417 G Q R F V+D +E L R++E G G N+GNP GE + + A + Sbjct: 533 GAQKRCFTDVADGIEALARIIENRDGCCNGQIINIGNPDNEASIRQLGEELLRQFEAHPL 592 Query: 416 QDTIDPNARIE-------FRENTQDDPHKRKPDITKAKEQLGWEPKIALRD 285 + P A + + QD H RKP I A++ +GW P I L + Sbjct: 593 RGNFPPFAGFREVESQSFYGKGYQDVSH-RKPSIDNARQLIGWTPGIELSE 642
>GALE_CORDI (P33119) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 328 Score = 33.1 bits (74), Expect = 0.67 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEG----LMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNAR 390 DG R + ++ DL + L +EG H FNLG+ +++ ++ ++ Sbjct: 212 DGTPIRDYIHIRDLADAHILALQSNVEGSH-RIFNLGSGEGYSVKQVIDTCREVTGHLIP 270 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTD 261 E DP KA+ +LGW+P+ R L +V+D Sbjct: 271 AEVAPRRAGDPAVLIASSAKAQSELGWKPQ---RTDLHTIVSD 310
>YFCH_ECOLI (P77775) Hypothetical UPF0105 protein yfcH| Length = 297 Score = 33.1 bits (74), Expect = 0.67 Identities = 12/36 (33%), Positives = 25/36 (69%) Frame = -2 Query: 560 GDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNP 453 G G+Q ++ ++ D+V G++ L++ + GPFN+ +P Sbjct: 190 GSGRQYLAWIHIDDMVNGILWLLDNELRGPFNMVSP 225
>RFFG_ECOLI (P27830) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 32.7 bits (73), Expect = 0.87 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 13/108 (12%) Frame = -2 Query: 563 YGDGKQTRSFQYVSDLVEGLMRLMEGDHIG-PFNLGNPGEFTMLELAKVVQDTID---PN 396 YG+G+Q R + YV D L + +G +N+G E L++ + + + ++ PN Sbjct: 217 YGNGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPN 276 Query: 395 A---------RIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL 279 I F + + D +K +LGW P+ G+ Sbjct: 277 KPHGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGM 324
>GMD2_ARATH (P93031) GDP-mannose 4,6 dehydratase 2 (EC 4.2.1.47) (GDP-D-mannose| dehydratase 2) (GMD 2) Length = 373 Score = 32.7 bits (73), Expect = 0.87 Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 4/106 (3%) Frame = -2 Query: 566 FYGDGKQTRSFQYVSDLVEGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPN--- 396 F G+ + +R + + D VE + +++ + + + T+ E V + N Sbjct: 245 FLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKD 304 Query: 395 -ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTD 261 I+ R + + D +KAKE LGW+P++ + +MV + Sbjct: 305 YVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDE 350
>CYAA_STIAU (P40137) Adenylate cyclase 1 (EC 4.6.1.1) (ATP pyrophosphate-lyase| 1) (Adenylyl cyclase 1) (AC 1) Length = 424 Score = 32.0 bits (71), Expect = 1.5 Identities = 19/52 (36%), Positives = 26/52 (50%) Frame = -2 Query: 512 EGLMRLMEGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARIEFRENTQDDP 357 E +R+ G H GP LGN G T + DT++ +RIE T+D P Sbjct: 321 EPCLRIGVGVHTGPAVLGNIGSATRRLEYTAIGDTVNLASRIESLTKTRDVP 372
>GM4D_SHIFL (P0AC91) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 373 Score = 32.0 bits (71), Expect = 1.5 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -2 Query: 341 DITKAKEQLGWEPKIALRDGLPLMVTD 261 D TKA E+LGW+P+I LR+ + MV + Sbjct: 323 DPTKAHEKLGWKPEITLREMVSEMVAN 349
>GM4D_ECOLI (P0AC88) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 373 Score = 32.0 bits (71), Expect = 1.5 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -2 Query: 341 DITKAKEQLGWEPKIALRDGLPLMVTD 261 D TKA E+LGW+P+I LR+ + MV + Sbjct: 323 DPTKAHEKLGWKPEITLREMVSEMVAN 349
>GM4D_ECOL6 (P0AC89) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 373 Score = 32.0 bits (71), Expect = 1.5 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -2 Query: 341 DITKAKEQLGWEPKIALRDGLPLMVTD 261 D TKA E+LGW+P+I LR+ + MV + Sbjct: 323 DPTKAHEKLGWKPEITLREMVSEMVAN 349
>GM4D_ECO57 (P0AC90) GDP-mannose 4,6-dehydratase (EC 4.2.1.47) (GDP-D-mannose| dehydratase) Length = 373 Score = 32.0 bits (71), Expect = 1.5 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -2 Query: 341 DITKAKEQLGWEPKIALRDGLPLMVTD 261 D TKA E+LGW+P+I LR+ + MV + Sbjct: 323 DPTKAHEKLGWKPEITLREMVSEMVAN 349
>ARAE3_ORYSA (Q8H0B2) Putative UDP-arabinose 4-epimerase 3 (EC 5.1.3.5)| (UDP-D-xylose 4-epimerase 3) (UDP-galactose 4-epimerase-like protein 3) (OsUEL-3) Length = 406 Score = 31.2 bits (69), Expect = 2.5 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 3/86 (3%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEGLMRLM---EGDHIGPFNLGNPGEFTMLELAKVVQDTIDPNARI 387 DG R + V+DLV+ ++ + E +G +N+G ++ E + N +I Sbjct: 293 DGTCIRDYIDVTDLVDAHVKALNKAEPSKVGIYNVGTGRGRSVKEFVDACKKATGVNIKI 352 Query: 386 EFRENTQDDPHKRKPDITKAKEQLGW 309 E+ D + D TK +L W Sbjct: 353 EYLSRRPGDYAEVYSDPTKINTELNW 378
>GALE_MYCPN (P75517) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 338 Score = 31.2 bits (69), Expect = 2.5 Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 10/114 (8%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEGLMRLMEGDHIGP------FNLGNPGEFTMLELAKVVQDTIDPN 396 DG R + +V DL + + + P FNLG+ F+ E+ Q P Sbjct: 225 DGSCIRDYIHVVDLCDAHLLAWKWLQANPKVRFESFNLGSGQGFSNWEVINTAQAIFAPE 284 Query: 395 A-RIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGL---PLMVTDFRKRI 246 +++ DP D TKAK L ++P +L L + DF R+ Sbjct: 285 QLQLKIESRRAGDPPVLVVDCTKAKRLLNFQPTRSLHKMLSDETIFYRDFYNRL 338
>RFBG_SALTY (P26397) CDP-glucose 4,6-dehydratase (EC 4.2.1.45)| Length = 359 Score = 30.8 bits (68), Expect = 3.3 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -2 Query: 377 ENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTDFRKRIFGD 237 EN + H K D +KA QLGW P+ L + L +V + I G+ Sbjct: 294 ENHPHEAHYLKLDCSKANMQLGWHPRWGLTETLGRIVKWHKAWIRGE 340
>FWDA_METJA (Q58569) Protein fwdA| Length = 567 Score = 30.0 bits (66), Expect = 5.7 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = -2 Query: 515 VEGLMRLMEGDHIGPFNLGNPGEF-TMLELAKVVQDTIDPNARIEFRENTQDDPH 354 V L+ L H+ P NLG+PG + T LE K V+ ++ R+ RE + + H Sbjct: 218 VNELLGLPHSIHVHPNNLGHPGNWETTLETMKCVEG-VEAKPRVGERETSYYNTH 271
>GALE_PASHA (Q59678) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 338 Score = 29.6 bits (65), Expect = 7.4 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 6/95 (6%) Frame = -2 Query: 557 DGKQTRSFQYVSDLVEGLMRLME------GDHIGPFNLGNPGEFTMLELAKVVQDTIDPN 396 DG R + +V DL G ++ ++ G H+ +NLG +++L++ K + Sbjct: 226 DGTGVRDYIHVVDLALGHLKALDKHQNDAGFHV--YNLGTGTGYSVLDMVKAFEAANGIT 283 Query: 395 ARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIAL 291 + + D KA EQLGWE + L Sbjct: 284 IPYKVVDRRPGDIAVCYSAPQKALEQLGWETERGL 318
>CHS2_PARBR (Q92444) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 2) (Class-II chitin synthase 2) Length = 1043 Score = 29.6 bits (65), Expect = 7.4 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = -3 Query: 337 SPRP---RSNLGGSPRSPSVTASPSWLPTSASGYSATRIA 227 SPRP S GGSPR P W P S++G ++ IA Sbjct: 116 SPRPGTPSSKYGGSPRRPLRQPVVCWPPASSAGETSIDIA 155
>TBX19_HUMAN (O60806) T-box transcription factor TBX19 (T-box protein 19) (T-box| factor, pituitary) Length = 448 Score = 29.3 bits (64), Expect = 9.7 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +1 Query: 376 SRNSIRAFGSMVSWTTLASSSMVNSPGLPKLNGPM 480 S N+++ F SWT+L+S+ + +P NGP+ Sbjct: 312 SSNNLQVFSGPDSWTSLSSTPHASILSVPHTNGPI 346
>ARNT_RABIT (O02748) Aryl hydrocarbon receptor nuclear translocator (ARNT| protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta) Length = 790 Score = 29.3 bits (64), Expect = 9.7 Identities = 11/42 (26%), Positives = 23/42 (54%) Frame = -3 Query: 298 SPSVTASPSWLPTSASGYSATRIAXXXXPKASKE*TGVQYYE 173 +P+ +P+W P++ G+SA ++A K+ GV ++ Sbjct: 631 NPTQGTAPTWTPSTRPGFSAQQVASQATTKSRSSQFGVGNFQ 672
>YBJS_ECOLI (P75821) Hypothetical protein ybjS| Length = 337 Score = 29.3 bits (64), Expect = 9.7 Identities = 11/21 (52%), Positives = 18/21 (85%) Frame = -2 Query: 341 DITKAKEQLGWEPKIALRDGL 279 DIT+A+E+LG++P I L +G+ Sbjct: 302 DITRAQEELGYQPVITLDEGI 322
>RP54_AZOVI (P08623) RNA polymerase sigma-54 factor| Length = 502 Score = 29.3 bits (64), Expect = 9.7 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 9/77 (11%) Frame = -2 Query: 449 EFTMLELAKVVQDTIDPNARIEFRENTQD---------DPHKRKPDITKAKEQLGWEPKI 297 + + L+L + +Q+ +D N +E +E+ +D + D T Q G+E Sbjct: 27 QLSTLDLQQEIQEALDSNPMLERQEDAEDYDSPDMLGEHGDQSTLDTTPGSYQEGYESGA 86 Query: 296 ALRDGLPLMVTDFRKRI 246 A DG L D+ +RI Sbjct: 87 ASEDGGTLEEGDWHERI 103
>ARAE3_ARATH (Q9SUN3) Putative UDP-arabinose 4-epimerase 3 (EC 5.1.3.5)| (UDP-D-xylose 4-epimerase 3) Length = 411 Score = 29.3 bits (64), Expect = 9.7 Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 3/90 (3%) Frame = -2 Query: 560 GDGKQTRSFQYVSDLVEGLMRLME---GDHIGPFNLGNPGEFTMLELAKVVQDTIDPNAR 390 GDG R + V+DLV+ ++ +E ++G +N+G ++ E + + + + Sbjct: 297 GDGTCVRDYIDVTDLVDAHVKALEKAKPRNVGIYNVGTGKGRSVKEFVEACKKATGVDIK 356 Query: 389 IEFRENTQDDPHKRKPDITKAKEQLGWEPK 300 ++F D + D K L W + Sbjct: 357 VDFLPRRPGDYAEVYSDPAKILRDLNWSAR 386
>GDBB_WHEAT (P06659) Gamma-gliadin B precursor| Length = 291 Score = 29.3 bits (64), Expect = 9.7 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 Query: 462 QVEWPNVITFHQPHQPLNQ 518 QV+WP F QPHQP +Q Sbjct: 28 QVQWPQQQPFLQPHQPFSQ 46 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,865,258 Number of Sequences: 219361 Number of extensions: 1761347 Number of successful extensions: 5582 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 5280 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5564 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
