ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal37k05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ103591.1| Oryza sativa (japonica cultivar-group) DT-related... 367 3e-98
2ref|NM_186000.1| Oryza sativa (japonica cultivar-group), mRNA 337 3e-89
3dbj|AK108402.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 5e-57
4gb|AY107813.1| Zea mays PCO123922 mRNA sequence 216 7e-53
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 188 2e-44
6dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic D... 188 2e-44
7dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic D... 188 2e-44
8gb|AY106595.1| Zea mays PCO125917 mRNA sequence 153 9e-34
9gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome... 133 8e-28
10gb|AC125478.14| Medicago truncatula clone mth2-31i19, complete s... 86 2e-13
11ref|NM_129690.3| Arabidopsis thaliana catalytic/ hydrolase/ phos... 50 0.009
12gb|AY133731.1| Arabidopsis thaliana clone U19049 unknown protein... 50 0.009
13gb|AY070081.1| Arabidopsis thaliana unknown protein (At2g41250) ... 50 0.009
14gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H10 ma... 50 0.009
15dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
16gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.14
17emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.14
18dbj|AB210414.1| Ciona intestinalis mRNA for transcription factor... 44 0.56
19dbj|AK222254.1| Ciona intestinalis cDNA, clone:ciad008k16, full ... 44 0.56
20gb|CP000025.1| Campylobacter jejuni RM1221, complete genome 42 2.2
21gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
22gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
23gb|AC122330.4| Mus musculus BAC clone RP23-342G7 from chromosome... 42 2.2
24emb|AL139078.2|CJ11168X5 Campylobacter jejuni subsp. jejuni NCTC... 42 2.2
25gb|AC103367.11| Mus musculus chromosome 18, clone RP24-127F15, c... 42 2.2
26dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
27dbj|AK069708.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
28emb|CT025538.13| Mouse DNA sequence from clone RP23-386E7 on chr... 42 2.2
29gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, com... 40 8.8
30gb|AC162894.4| Mus musculus chromosome 3, clone RP23-326A24, com... 40 8.8
31emb|AL928544.5| Mouse DNA sequence from clone RP23-358C5 on chro... 40 8.8
32gb|CP000001.1| Bacillus cereus E33L, complete genome 40 8.8
33emb|AL138733.15| Human DNA sequence from clone RP1-297M16 on chr... 40 8.8
34gb|AY302598.1| Drosophila melanogaster ANKTM1 mRNA, complete cds 40 8.8
35emb|AL132909.1|ATT14K23 Arabidopsis thaliana DNA chromosome 3, B... 40 8.8
36gb|AC144487.1| Gasterosteus aculeatus clone CH213-160O9, complet... 40 8.8
37gb|AC010709.4| Drosophila melanogaster 3L BAC RPCI98-18D24 (Rosw... 40 8.8
38gb|AC010114.6| Drosophila melanogaster 3L BAC RP98-10P9 (Roswell... 40 8.8
39ref|NM_140006.1| Drosophila melanogaster Transient receptor pote... 40 8.8
40gb|AC093699.5| Homo sapiens BAC clone RP11-810C20 from 4, comple... 40 8.8
41gb|AC007749.3| Homo sapiens BAC clone RP11-574O16 from 2, comple... 40 8.8
42gb|AC137733.5| Homo sapiens chromosome 8, clone CTD-3061M5, comp... 40 8.8
43gb|AE003554.3| Drosophila melanogaster chromosome 3L, section 31... 40 8.8
44gb|AC102099.14| Mus musculus chromosome 5, clone RP23-52A2, comp... 40 8.8
45dbj|AP006276.1| Homo sapiens genomic DNA, chromosome 8q13.3, clo... 40 8.8 
>gb|DQ103591.1| Oryza sativa (japonica cultivar-group) DT-related protein (Dr1)
           mRNA, complete cds
          Length = 876

 Score =  367 bits (185), Expect = 3e-98
 Identities = 266/293 (90%)
 Strand = Plus / Minus

                                                                       
Query: 351 taaccccgatcctttctgcgacttccttgaaggagtgaacatcactgccccaaagccagg 410
           |||| ||||||||||||||||| |||||||| |||| ||||||||||||||| |||||||
Sbjct: 736 taactccgatcctttctgcgacctccttgaaagagtaaacatcactgccccagagccagg 677

                                                                       
Query: 411 catcgcagcctgcgtccctagctccccacagatcgttccgacggtcgtccccaatatgca 470
           |||| |||||||| ||||| |||||||| ||||| ||||  ||||| || ||||||||||
Sbjct: 676 catcacagcctgcatccctggctccccagagatcattcctgcggtcatcaccaatatgca 617

                                                                       
Query: 471 cagcctcttcaggcttcacatccaacaactcgcaggccttcaggaatattgttgggtttg 530
           |||| ||||||||||||||| | || |||||||| ||||||| |||||||||||||||||
Sbjct: 616 cagcttcttcaggcttcacacctaaaaactcgcaagccttcaagaatattgttgggtttg 557

                                                                       
Query: 531 gcttttctgctgcaacctcagcagatacagcaaccgcatcaaaccagtgatcacaattca 590
           ||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 556 gcttttccgcagcaacctcagcagatacagcaactgcatcaaaccagtgatcacaattca 497

                                                                
Query: 591 gtgcctgtaaaagtggccggaggcgggtgtcaaagttggatacaacagctgtt 643
           | ||||||||||||||||| || || |||||||||||||||||||||||||||
Sbjct: 496 gggcctgtaaaagtggccgaagacgagtgtcaaagttggatacaacagctgtt 444
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>ref|NM_186000.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 915

 Score =  337 bits (170), Expect = 3e-89
 Identities = 245/270 (90%)
 Strand = Plus / Minus

                                                                       
Query: 374 tccttgaaggagtgaacatcactgccccaaagccaggcatcgcagcctgcgtccctagct 433
           |||||||| |||| ||||||||||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 818 tccttgaaagagtaaacatcactgccccagagccaggcatcacagcctgcatccctggct 759

                                                                       
Query: 434 ccccacagatcgttccgacggtcgtccccaatatgcacagcctcttcaggcttcacatcc 493
           ||||| ||||| ||||  ||||| || |||||||||||||| ||||||||||||||| | 
Sbjct: 758 ccccagagatcattcctgcggtcatcaccaatatgcacagcttcttcaggcttcacacct 699

                                                                       
Query: 494 aacaactcgcaggccttcaggaatattgttgggtttggcttttctgctgcaacctcagca 553
           || |||||||| ||||||| |||||||||||||||||||||||| || ||||||||||||
Sbjct: 698 aaaaactcgcaagccttcaagaatattgttgggtttggcttttccgcagcaacctcagca 639

                                                                       
Query: 554 gatacagcaaccgcatcaaaccagtgatcacaattcagtgcctgtaaaagtggccggagg 613
           ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || 
Sbjct: 638 gatacagcaactgcatcaaaccagtgatcacaattcagggcctgtaaaagtggccgaaga 579

                                         
Query: 614 cgggtgtcaaagttggatacaacagctgtt 643
           || |||||||||||||||||||||||||||
Sbjct: 578 cgtgtgtcaaagttggatacaacagctgtt 549
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>dbj|AK108402.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-G05, full
           insert sequence
          Length = 1071

 Score =  230 bits (116), Expect = 5e-57
 Identities = 246/288 (85%), Gaps = 1/288 (0%)
 Strand = Plus / Minus

                                                                       
Query: 352 aaccccgatcctttctgcgacttccttgaaggagtgaacatcactgccccaaagccaggc 411
           |||||||||||| ||||| || |||||||| |||||||||||||| ||||| ||||||||
Sbjct: 920 aaccccgatcctctctgcaacctccttgaaagagtgaacatcacttccccatagccaggc 861

                                                                       
Query: 412 atcgcagcctgcgtccctagctccccacagatcgttccgacggtcgtccccaatatgcac 471
           |||||||||||| || ||||||||||| | ||| |||  ||| || || || | ||||||
Sbjct: 860 atcgcagcctgcatctctagctccccatatatcattct-acgatcatcgccgacatgcac 802

                                                                       
Query: 472 agcctcttcaggcttcacatccaacaactcgcaggccttcaggaatattgttgggtttgg 531
            ||||||||||| || ||| | ||  |||| || |||||||| |||||||||||||||||
Sbjct: 801 ggcctcttcaggtttgacacctaaagactcacatgccttcagaaatattgttgggtttgg 742

                                                                       
Query: 532 cttttctgctgcaacctcagcagatacagcaaccgcatcaaaccagtgatcacaattcag 591
           ||||||||| |||||||||||||| || |||||||||||||||||||||||||| |||||
Sbjct: 741 cttttctgcagcaacctcagcagagaccgcaaccgcatcaaaccagtgatcacacttcag 682

                                                           
Query: 592 tgcctgtaaaagtggccggaggcgggtgtcaaagttggatacaacagc 639
             | ||||| || ||||| || ||||| ||||| ||||| ||||||||
Sbjct: 681 aacatgtaacagaggccgtagacgggtatcaaaattggagacaacagc 634
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>gb|AY107813.1| Zea mays PCO123922 mRNA sequence
          Length = 730

 Score =  216 bits (109), Expect = 7e-53
 Identities = 220/257 (85%)
 Strand = Plus / Minus

                                                                       
Query: 374 tccttgaaggagtgaacatcactgccccaaagccaggcatcgcagcctgcgtccctagct 433
           ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 606 tccttgaaggagtaaacgtcactgccccaaagccaggcatcgcagcctgcatccctcgct 547

                                                                       
Query: 434 ccccacagatcgttccgacggtcgtccccaatatgcacagcctcttcaggcttcacatcc 493
           ||||| |  ||||||| |||||| || ||||| ||||| || |||||||| |||||  | 
Sbjct: 546 ccccataagtcgttcctacggtcatcaccaatgtgcaccgcttcttcaggtttcactcct 487

                                                                       
Query: 494 aacaactcgcaggccttcaggaatattgttgggtttggcttttctgctgcaacctcagca 553
           | || |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 486 agcagctcgcaggccttcaagaatattgtggggttcggcttttctgctgcaacctcagca 427

                                                                       
Query: 554 gatacagcaaccgcatcaaaccagtgatcacaattcagtgcctgtaaaagtggccggagg 613
           || |||||||| || || ||||||   || || ||||| ||||||||||| ||||| || 
Sbjct: 426 gacacagcaactgcgtcgaaccagccgtcgcatttcagcgcctgtaaaagcggccgaaga 367

                            
Query: 614 cgggtgtcaaagttgga 630
           || ||||| ||||||||
Sbjct: 366 cgagtgtcgaagttgga 350
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  188 bits (95), Expect = 2e-44
 Identities = 155/175 (88%)
 Strand = Plus / Plus

                                                                            
Query: 374      tccttgaaggagtgaacatcactgccccaaagccaggcatcgcagcctgcgtccctagct 433
                |||||||| |||| ||||||||||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 27730472 tccttgaaagagtaaacatcactgccccagagccaggcatcacagcctgcatccctggct 27730531

                                                                            
Query: 434      ccccacagatcgttccgacggtcgtccccaatatgcacagcctcttcaggcttcacatcc 493
                ||||| ||||| ||||  ||||| || |||||||||||||| ||||||||||||||| | 
Sbjct: 27730532 ccccagagatcattcctgcggtcatcaccaatatgcacagcttcttcaggcttcacacct 27730591

                                                                       
Query: 494      aacaactcgcaggccttcaggaatattgttgggtttggcttttctgctgcaacct 548
                || |||||||| ||||||| |||||||||||||||||||||||| || |||||||
Sbjct: 27730592 aaaaactcgcaagccttcaagaatattgttgggtttggcttttccgcagcaacct 27730646



 Score =  157 bits (79), Expect = 5e-35
 Identities = 94/99 (94%)
 Strand = Plus / Plus

                                                                            
Query: 545      acctcagcagatacagcaaccgcatcaaaccagtgatcacaattcagtgcctgtaaaagt 604
                |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 27730744 acctcagcagatacagcaactgcatcaaaccagtgatcacaattcagggcctgtaaaagt 27730803

                                                       
Query: 605      ggccggaggcgggtgtcaaagttggatacaacagctgtt 643
                ||||| || || |||||||||||||||||||||||||||
Sbjct: 27730804 ggccgaagacgtgtgtcaaagttggatacaacagctgtt 27730842
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>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0496C02
          Length = 148419

 Score =  188 bits (95), Expect = 2e-44
 Identities = 155/175 (88%)
 Strand = Plus / Plus

                                                                         
Query: 374   tccttgaaggagtgaacatcactgccccaaagccaggcatcgcagcctgcgtccctagct 433
             |||||||| |||| ||||||||||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 22851 tccttgaaagagtaaacatcactgccccagagccaggcatcacagcctgcatccctggct 22910

                                                                         
Query: 434   ccccacagatcgttccgacggtcgtccccaatatgcacagcctcttcaggcttcacatcc 493
             ||||| ||||| ||||  ||||| || |||||||||||||| ||||||||||||||| | 
Sbjct: 22911 ccccagagatcattcctgcggtcatcaccaatatgcacagcttcttcaggcttcacacct 22970

                                                                    
Query: 494   aacaactcgcaggccttcaggaatattgttgggtttggcttttctgctgcaacct 548
             || |||||||| ||||||| |||||||||||||||||||||||| || |||||||
Sbjct: 22971 aaaaactcgcaagccttcaagaatattgttgggtttggcttttccgcagcaacct 23025



 Score =  157 bits (79), Expect = 5e-35
 Identities = 94/99 (94%)
 Strand = Plus / Plus

                                                                         
Query: 545   acctcagcagatacagcaaccgcatcaaaccagtgatcacaattcagtgcctgtaaaagt 604
             |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 23123 acctcagcagatacagcaactgcatcaaaccagtgatcacaattcagggcctgtaaaagt 23182

                                                    
Query: 605   ggccggaggcgggtgtcaaagttggatacaacagctgtt 643
             ||||| || || |||||||||||||||||||||||||||
Sbjct: 23183 ggccgaagacgtgtgtcaaagttggatacaacagctgtt 23221
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>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1477_F01
          Length = 158792

 Score =  188 bits (95), Expect = 2e-44
 Identities = 155/175 (88%)
 Strand = Plus / Plus

                                                                          
Query: 374    tccttgaaggagtgaacatcactgccccaaagccaggcatcgcagcctgcgtccctagct 433
              |||||||| |||| ||||||||||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 109574 tccttgaaagagtaaacatcactgccccagagccaggcatcacagcctgcatccctggct 109633

                                                                          
Query: 434    ccccacagatcgttccgacggtcgtccccaatatgcacagcctcttcaggcttcacatcc 493
              ||||| ||||| ||||  ||||| || |||||||||||||| ||||||||||||||| | 
Sbjct: 109634 ccccagagatcattcctgcggtcatcaccaatatgcacagcttcttcaggcttcacacct 109693

                                                                     
Query: 494    aacaactcgcaggccttcaggaatattgttgggtttggcttttctgctgcaacct 548
              || |||||||| ||||||| |||||||||||||||||||||||| || |||||||
Sbjct: 109694 aaaaactcgcaagccttcaagaatattgttgggtttggcttttccgcagcaacct 109748



 Score =  157 bits (79), Expect = 5e-35
 Identities = 94/99 (94%)
 Strand = Plus / Plus

                                                                          
Query: 545    acctcagcagatacagcaaccgcatcaaaccagtgatcacaattcagtgcctgtaaaagt 604
              |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 109846 acctcagcagatacagcaactgcatcaaaccagtgatcacaattcagggcctgtaaaagt 109905

                                                     
Query: 605    ggccggaggcgggtgtcaaagttggatacaacagctgtt 643
              ||||| || || |||||||||||||||||||||||||||
Sbjct: 109906 ggccgaagacgtgtgtcaaagttggatacaacagctgtt 109944
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>gb|AY106595.1| Zea mays PCO125917 mRNA sequence
          Length = 521

 Score =  153 bits (77), Expect = 9e-34
 Identities = 182/217 (83%)
 Strand = Plus / Minus

                                                                       
Query: 374 tccttgaaggagtgaacatcactgccccaaagccaggcatcgcagcctgcgtccctagct 433
           |||||||| ||| |||| || |||||||| ||||| |||||||||||||| || || |||
Sbjct: 227 tccttgaaagagcgaacgtcgctgccccagagccaagcatcgcagcctgcatctctcgct 168

                                                                       
Query: 434 ccccacagatcgttccgacggtcgtccccaatatgcacagcctcttcaggcttcacatcc 493
           ||||| | ||| || | ||| ||||| ||||  |||||||| ||||||||||||||  ||
Sbjct: 167 ccccatatatcatttctacgatcgtcgccaacgtgcacagcttcttcaggcttcacgccc 108

                                                                       
Query: 494 aacaactcgcaggccttcaggaatattgttgggtttggcttttctgctgcaacctcagca 553
           |  ||||| |||||||||| ||||||| |||| || ||||| |||||||||||||| |||
Sbjct: 107 agtaactcacaggccttcaagaatattattggattcggcttctctgctgcaacctctgca 48

                                                
Query: 554 gatacagcaaccgcatcaaaccagtgatcacaattca 590
           || || ||||| |||||||||||||| ||||| ||||
Sbjct: 47  gagactgcaactgcatcaaaccagtggtcacatttca 11
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>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0073M15, complete sequence
          Length = 143071

 Score =  133 bits (67), Expect = 8e-28
 Identities = 149/175 (85%), Gaps = 1/175 (0%)
 Strand = Plus / Minus

                                                                         
Query: 374   tccttgaaggagtgaacatcactgccccaaagccaggcatcgcagcctgcgtccctagct 433
             |||||||| |||||||||||||| ||||| |||||||||||||||||||| || ||||||
Sbjct: 49224 tccttgaaagagtgaacatcacttccccatagccaggcatcgcagcctgcatctctagct 49165

                                                                         
Query: 434   ccccacagatcgttccgacggtcgtccccaatatgcacagcctcttcaggcttcacatcc 493
             ||||| | ||| || | ||| || || || | |||||| ||||||||||| || ||| | 
Sbjct: 49164 ccccatatatcatt-ctacgatcatcgccgacatgcacggcctcttcaggtttgacacct 49106

                                                                    
Query: 494   aacaactcgcaggccttcaggaatattgttgggtttggcttttctgctgcaacct 548
             ||  |||| || |||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 49105 aaagactcacatgccttcagaaatattgttgggtttggcttttctgcagcaacct 49051



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                         
Query: 545   acctcagcagatacagcaaccgcatcaaaccagtgatcacaattcagtgcctgtaaaagt 604
             ||||||||||| || |||||||||||||||||||||||||| |||||  | ||||| || 
Sbjct: 48915 acctcagcagagaccgcaaccgcatcaaaccagtgatcacacttcagaacatgtaacaga 48856

                                                
Query: 605   ggccggaggcgggtgtcaaagttggatacaacagc 639
             ||||| || ||||| ||||| ||||| ||||||||
Sbjct: 48855 ggccgtagacgggtatcaaaattggagacaacagc 48821
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>gb|AC125478.14| Medicago truncatula clone mth2-31i19, complete sequence
          Length = 111256

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 142/175 (81%)
 Strand = Plus / Minus

                                                                         
Query: 374   tccttgaaggagtgaacatcactgccccaaagccaggcatcgcagcctgcgtccctagct 433
             ||||| || |||||||||||||| ||||||||||| ||||| |||||||| || || || 
Sbjct: 19367 tccttaaaagagtgaacatcacttccccaaagccatgcatcacagcctgcatctctggca 19308

                                                                         
Query: 434   ccccacagatcgttccgacggtcgtccccaatatgcacagcctcttcaggcttcacatcc 493
             ||||| | ||| || ||||| || ||||||| ||| ||||| || ||||| || ||||||
Sbjct: 19307 ccccatatatcatttcgacgatcatccccaacatgaacagcatcctcaggttttacatcc 19248

                                                                    
Query: 494   aacaactcgcaggccttcaggaatattgttgggtttggcttttctgctgcaacct 548
             || |  || || || ||||| ||||| ||||| ||||| || |||||| ||||||
Sbjct: 19247 aatagttcacatgctttcagaaatatagttggatttggtttctctgcttcaacct 19193
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>ref|NM_129690.3| Arabidopsis thaliana catalytic/ hydrolase/ phosphoglycolate
           phosphatase AT2G41250 mRNA, complete cds
          Length = 1143

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 392 tcactgccccaaagccaggcatcgcagcctgcgtccctagctccccacagatcgttccga 451
           ||||| ||||| ||||| || || ||||||||||| ||||||||||| | ||| |||| |
Sbjct: 891 tcacttccccagagccaagcgtcacagcctgcgtctctagctccccatacatcattccta 832

                
Query: 452 cggtc 456
           |||||
Sbjct: 831 cggtc 827
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>gb|AY133731.1| Arabidopsis thaliana clone U19049 unknown protein (At2g41250) mRNA,
           complete cds
          Length = 904

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 392 tcactgccccaaagccaggcatcgcagcctgcgtccctagctccccacagatcgttccga 451
           ||||| ||||| ||||| || || ||||||||||| ||||||||||| | ||| |||| |
Sbjct: 824 tcacttccccagagccaagcgtcacagcctgcgtctctagctccccatacatcattccta 765

                
Query: 452 cggtc 456
           |||||
Sbjct: 764 cggtc 760
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>gb|AY070081.1| Arabidopsis thaliana unknown protein (At2g41250) mRNA, complete cds
          Length = 1160

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 392 tcactgccccaaagccaggcatcgcagcctgcgtccctagctccccacagatcgttccga 451
           ||||| ||||| ||||| || || ||||||||||| ||||||||||| | ||| |||| |
Sbjct: 891 tcacttccccagagccaagcgtcacagcctgcgtctctagctccccatacatcattccta 832

                
Query: 452 cggtc 456
           |||||
Sbjct: 831 cggtc 827
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>gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H10 map CIC11C08, complete
             sequence
          Length = 96066

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                         
Query: 392   tcactgccccaaagccaggcatcgcagcctgcgtccctagctccccacagatcgttccga 451
             ||||| ||||| ||||| || || ||||||||||| ||||||||||| | ||| |||| |
Sbjct: 70872 tcacttccccagagccaagcgtcacagcctgcgtctctagctccccatacatcattccta 70813

                  
Query: 452   cggtc 456
             |||||
Sbjct: 70812 cggtc 70808
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                               
Query: 545      acctcagcagatacagcaaccgcatcaaaccagtgatcacaattcag 591
                |||||||||||| ||||||| |||||||| || ||||| || |||||
Sbjct: 21611080 acctcagcagattcagcaactgcatcaaatcaatgatcgcatttcag 21611034
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                               
Query: 545      acctcagcagatacagcaaccgcatcaaaccagtgatcacaattcag 591
                |||||||||||| ||||||| |||||||| || ||||| || |||||
Sbjct: 21539401 acctcagcagattcagcaactgcatcaaatcaatgatcgcatttcag 21539355
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>emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa0085B23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 158019

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 545   acctcagcagatacagcaaccgcatcaaaccagtgatcacaattcag 591
             |||||||||||| ||||||| |||||||| || ||||| || |||||
Sbjct: 34809 acctcagcagattcagcaactgcatcaaatcaatgatcgcatttcag 34855
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>dbj|AB210414.1| Ciona intestinalis mRNA for transcription factor protein, complete
            cds, clone: ciem819m22
          Length = 2938

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 476  tcttcaggcttcacatccaaca 497
            ||||||||||||||||||||||
Sbjct: 2368 tcttcaggcttcacatccaaca 2347
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>dbj|AK222254.1| Ciona intestinalis cDNA, clone:ciad008k16, full insert sequence
          Length = 2991

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 476  tcttcaggcttcacatccaaca 497
            ||||||||||||||||||||||
Sbjct: 2367 tcttcaggcttcacatccaaca 2346
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>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome
          Length = 1777831

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 556     tacagcaaccgcatcaaacca 576
               |||||||||||||||||||||
Sbjct: 1569975 tacagcaaccgcatcaaacca 1569995
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>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06,
             complete sequence
          Length = 136143

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 533   ttttctgctgcaacctcagca 553
             |||||||||||||||||||||
Sbjct: 16682 ttttctgctgcaacctcagca 16702



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 533  ttttctgctgcaacctcagca 553
            |||||||||||||||||||||
Sbjct: 6530 ttttctgctgcaacctcagca 6550
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>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07,
              complete sequence
          Length = 159932

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 533    ttttctgctgcaacctcagca 553
              |||||||||||||||||||||
Sbjct: 159422 ttttctgctgcaacctcagca 159442
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>gb|AC122330.4| Mus musculus BAC clone RP23-342G7 from chromosome 18, complete sequence
          Length = 194291

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 475    ctcttcaggcttcacatccaa 495
              |||||||||||||||||||||
Sbjct: 185623 ctcttcaggcttcacatccaa 185643
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>emb|AL139078.2|CJ11168X5 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment
              5/6
          Length = 263335

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 556    tacagcaaccgcatcaaacca 576
              |||||||||||||||||||||
Sbjct: 209145 tacagcaaccgcatcaaacca 209165
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>gb|AC103367.11| Mus musculus chromosome 18, clone RP24-127F15, complete sequence
          Length = 169521

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 475   ctcttcaggcttcacatccaa 495
             |||||||||||||||||||||
Sbjct: 24627 ctcttcaggcttcacatccaa 24647
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 533      ttttctgctgcaacctcagca 553
                |||||||||||||||||||||
Sbjct: 17639924 ttttctgctgcaacctcagca 17639944



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 533      ttttctgctgcaacctcagca 553
                |||||||||||||||||||||
Sbjct: 17629772 ttttctgctgcaacctcagca 17629792
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>dbj|AK069708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031M23, full
            insert sequence
          Length = 2455

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 533  ttttctgctgcaacctcagca 553
            |||||||||||||||||||||
Sbjct: 1800 ttttctgctgcaacctcagca 1780
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>emb|CT025538.13| Mouse DNA sequence from clone RP23-386E7 on chromosome 14, complete
              sequence
          Length = 206957

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 526    gtttggcttttctgctgcaac 546
              |||||||||||||||||||||
Sbjct: 116822 gtttggcttttctgctgcaac 116802
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>gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, complete sequence
          Length = 159429

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   ttccatggaaaatatgtaca 119
             ||||||||||||||||||||
Sbjct: 64684 ttccatggaaaatatgtaca 64665
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>gb|AC162894.4| Mus musculus chromosome 3, clone RP23-326A24, complete sequence
          Length = 187598

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    ttccatggaaaatatgtaca 119
              ||||||||||||||||||||
Sbjct: 106299 ttccatggaaaatatgtaca 106280
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>emb|AL928544.5| Mouse DNA sequence from clone RP23-358C5 on chromosome 2, complete
            sequence
          Length = 126329

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 522  ttgggtttggcttttctgctgcaa 545
            ||||||||| ||||||||||||||
Sbjct: 3027 ttgggtttgacttttctgctgcaa 3004
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 98      gcttccatggaaaatatgta 117
               ||||||||||||||||||||
Sbjct: 3011559 gcttccatggaaaatatgta 3011578
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>emb|AL138733.15| Human DNA sequence from clone RP1-297M16 on chromosome 6 Contains part
             of a novel gene and a novel gene, complete sequence
          Length = 65582

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   cactgccccaaagccaggca 412
             ||||||||||||||||||||
Sbjct: 30842 cactgccccaaagccaggca 30861
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>gb|AY302598.1| Drosophila melanogaster ANKTM1 mRNA, complete cds
          Length = 3594

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  ttattgaagctcaggggggctcgg 233
            |||||||||||||||| |||||||
Sbjct: 3584 ttattgaagctcagggcggctcgg 3561
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>emb|AL132909.1|ATT14K23 Arabidopsis thaliana DNA chromosome 3, BAC clone T14K23
          Length = 101786

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   cccagcctttttattgaagc 219
             ||||||||||||||||||||
Sbjct: 67028 cccagcctttttattgaagc 67009
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>gb|AC144487.1| Gasterosteus aculeatus clone CH213-160O9, complete sequence
          Length = 181162

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 334   gttgcccatacccacgctaacccc 357
             ||||||||| ||||||||||||||
Sbjct: 48775 gttgcccatccccacgctaacccc 48752
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>gb|AC010709.4| Drosophila melanogaster 3L BAC RPCI98-18D24 (Roswell Park Cancer
              Institute Drosophila BAC library) complete sequence
          Length = 166520

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 210    ttattgaagctcaggggggctcgg 233
              |||||||||||||||| |||||||
Sbjct: 126570 ttattgaagctcagggcggctcgg 126593
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>gb|AC010114.6| Drosophila melanogaster 3L BAC RP98-10P9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 181726

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   ttattgaagctcaggggggctcgg 233
             |||||||||||||||| |||||||
Sbjct: 18863 ttattgaagctcagggcggctcgg 18886
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>ref|NM_140006.1| Drosophila melanogaster Transient receptor potential A1 CG5751-RA
            (TrpA1), mRNA
          Length = 3825

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  ttattgaagctcaggggggctcgg 233
            |||||||||||||||| |||||||
Sbjct: 3815 ttattgaagctcagggcggctcgg 3792
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>gb|AC093699.5| Homo sapiens BAC clone RP11-810C20 from 4, complete sequence
          Length = 136898

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 57     aaattaaggcctgtcacaaagagacact 84
              ||||||||  ||||||||||||||||||
Sbjct: 121190 aaattaagaactgtcacaaagagacact 121217
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>gb|AC007749.3| Homo sapiens BAC clone RP11-574O16 from 2, complete sequence
          Length = 193644

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   acatcactgccccaaagcca 408
             ||||||||||||||||||||
Sbjct: 22173 acatcactgccccaaagcca 22192
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>gb|AC137733.5| Homo sapiens chromosome 8, clone CTD-3061M5, complete sequence
          Length = 28150

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   ttccatggaaaatatgtaca 119
             ||||||||||||||||||||
Sbjct: 22327 ttccatggaaaatatgtaca 22308
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>gb|AE003554.3| Drosophila melanogaster chromosome 3L, section 31 of 83 of the complete
              sequence
          Length = 285158

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 210    ttattgaagctcaggggggctcgg 233
              |||||||||||||||| |||||||
Sbjct: 277581 ttattgaagctcagggcggctcgg 277604
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>gb|AC102099.14| Mus musculus chromosome 5, clone RP23-52A2, complete sequence
          Length = 235239

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 32    tgttgctacaatatagacttatag 55
             ||||||||||| ||||||||||||
Sbjct: 65136 tgttgctacaagatagacttatag 65113
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>dbj|AP006276.1| Homo sapiens genomic DNA, chromosome 8q13.3, clone: KB1315B7, complete
              sequence
          Length = 147415

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    ttccatggaaaatatgtaca 119
              ||||||||||||||||||||
Sbjct: 146813 ttccatggaaaatatgtaca 146794


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,557,674
Number of Sequences: 3902068
Number of extensions: 4557674
Number of successful extensions: 77287
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77105
Number of HSP's gapped (non-prelim): 182
length of query: 646
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 623
effective length of database: 17,143,297,704
effective search space: 10680274469592
effective search space used: 10680274469592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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