ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal37j24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M61146.1|BLYPSAL Hordeum vulgare photosystem I protein (PSI-L) mRNA, complete cds Length = 777 Score = 1221 bits (616), Expect = 0.0 Identities = 630/632 (99%), Gaps = 2/632 (0%) Strand = Plus / Minus Query: 19 ccgagaagagatggcatgatctggagacatcgtacatgcatgcc-cctattaatctactt 77 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 717 ccgagaagagatggcatgatctggagacatcgtacatgcatgccacctattaatctactt 658 Query: 78 gaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcgccggatac 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 gaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcgccggatac 598 Query: 138 accgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctggagcttgtc 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 accgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctggagcttgtc 538 Query: 198 ggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcgccctcgtt 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 ggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcgccctcgtt 478 Query: 258 gaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagtccgatggc 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 gaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagtccgatggc 418 Query: 318 gccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtgagcgcgaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 gccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtgagcgcgaa 358 Query: 378 ggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggaggagcgggct 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 ggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggaggagcgggct 298 Query: 438 gacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgagggggctggaggt 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 gacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgagggggctggaggt 238 Query: 498 gaccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggaccacttggta 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 gaccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggaccacttggta 178 Query: 558 cgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggtgagcgaagc 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 cgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggtgagcgaagc 118 Query: 618 gccggacatgccccgcggctttggagcacgcc 649 ||||||||||||||||||| |||||||||||| Sbjct: 117 gccggacatgccccgcggc-ttggagcacgcc 87
>dbj|AK099109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F01, full insert sequence Length = 932 Score = 644 bits (325), Expect = 0.0 Identities = 508/569 (89%) Strand = Plus / Minus Query: 70 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 129 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 699 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 640 Query: 130 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 189 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 639 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 580 Query: 190 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 249 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 579 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 520 Query: 250 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 309 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 519 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 460 Query: 310 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 369 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 459 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 400 Query: 370 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 429 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 399 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 340 Query: 430 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 489 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 339 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 280 Query: 490 ctggaggtgaccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggacc 549 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 279 ctggaggtcaccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcacc 220 Query: 550 acttggtacgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggtg 609 || |||||||| ||||| ||||||| || |||||||| |||||||||||||| || Sbjct: 219 acctggtacgttggcttctcagactggatggccttgactgtgaagcggggcctccttgtc 160 Query: 610 agcgaagcgccggacatgccccgcggctt 638 |||||||| || |||| |||| |||||| Sbjct: 159 agcgaagcaccagacagccccctcggctt 131
>dbj|AK059750.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B01, full insert sequence Length = 985 Score = 644 bits (325), Expect = 0.0 Identities = 508/569 (89%) Strand = Plus / Minus Query: 70 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 129 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 721 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 662 Query: 130 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 189 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 661 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 602 Query: 190 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 249 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 601 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 542 Query: 250 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 309 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 541 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 482 Query: 310 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 369 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 481 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 422 Query: 370 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 429 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 421 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 362 Query: 430 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 489 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 361 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 302 Query: 490 ctggaggtgaccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggacc 549 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 301 ctggaggtcaccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcacc 242 Query: 550 acttggtacgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggtg 609 || |||||||| ||||| ||||||| || |||||||| |||||||||||||| || Sbjct: 241 acctggtacgttggcttctcagactggatggccttgactgtgaagcggggcctccttgtc 182 Query: 610 agcgaagcgccggacatgccccgcggctt 638 |||||||| || |||| |||| |||||| Sbjct: 181 agcgaagcaccagacagccccctcggctt 153
>dbj|AK119162.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D08, full insert sequence Length = 923 Score = 636 bits (321), Expect = e-179 Identities = 507/569 (89%) Strand = Plus / Minus Query: 70 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 129 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 749 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 690 Query: 130 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 189 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 689 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 630 Query: 190 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 249 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 629 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 570 Query: 250 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 309 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 569 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 510 Query: 310 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 369 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 509 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 450 Query: 370 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 429 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 449 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 390 Query: 430 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 489 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 389 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 330 Query: 490 ctggaggtgaccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggacc 549 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 329 ctggaggtcaccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcacc 270 Query: 550 acttggtacgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggtg 609 || |||||||| ||||| ||||||| || |||||| | |||||||||||||| || Sbjct: 269 acctggtacgttggcttctcagactggatggccttggctgtgaagcggggcctccttgtc 210 Query: 610 agcgaagcgccggacatgccccgcggctt 638 |||||||| || |||| |||| |||||| Sbjct: 209 agcgaagcaccagacagccccctcggctt 181
>dbj|AK105154.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-F07, full insert sequence Length = 964 Score = 636 bits (321), Expect = e-179 Identities = 507/569 (89%) Strand = Plus / Minus Query: 70 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 129 ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| | || Sbjct: 704 atctacttgaagaagtacgggagatcgagcacgtagaggaggaagtaggcccagaggacg 645 Query: 130 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 189 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 644 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 585 Query: 190 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 249 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 584 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 525 Query: 250 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 309 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 524 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 465 Query: 310 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 369 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 464 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 405 Query: 370 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 429 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 404 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 345 Query: 430 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 489 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 344 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 285 Query: 490 ctggaggtgaccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggacc 549 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 284 ctggaggtcaccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcacc 225 Query: 550 acttggtacgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggtg 609 || |||||||| ||||| ||||||| || |||||||| |||||||||||||| || Sbjct: 224 acctggtacgttggcttctcagactggatggccttgactgtgaagcggggcctccttgtc 165 Query: 610 agcgaagcgccggacatgccccgcggctt 638 |||||||| || |||| |||| |||||| Sbjct: 164 agcgaagcaccagacagccccctcggctt 136
>dbj|AK058207.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A09, full insert sequence Length = 923 Score = 636 bits (321), Expect = e-179 Identities = 507/569 (89%) Strand = Plus / Minus Query: 70 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 129 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 749 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 690 Query: 130 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 189 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 689 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 630 Query: 190 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 249 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 629 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 570 Query: 250 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 309 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 569 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 510 Query: 310 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 369 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 509 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 450 Query: 370 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 429 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 449 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 390 Query: 430 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 489 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 389 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 330 Query: 490 ctggaggtgaccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggacc 549 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 329 ctggaggtcaccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcacc 270 Query: 550 acttggtacgtcggcttgtcagacttgacagccttgacgacgaagcggggcctccgggtg 609 || |||||||| ||||| ||||||| || |||||| | |||||||||||||| || Sbjct: 269 acctggtacgttggcttctcagactggatggccttggctgtgaagcggggcctccttgtc 210 Query: 610 agcgaagcgccggacatgccccgcggctt 638 |||||||| || |||| |||| |||||| Sbjct: 209 agcgaagcaccagacagccccctcggctt 181
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 618 bits (312), Expect = e-174 Identities = 450/496 (90%) Strand = Plus / Minus Query: 70 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 129 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 13161383 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 13161324 Query: 130 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 189 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 13161323 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 13161264 Query: 190 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 249 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 13161263 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 13161204 Query: 250 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 309 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 13161203 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 13161144 Query: 310 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 369 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 13161143 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 13161084 Query: 370 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 429 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 13161083 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 13161024 Query: 430 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 489 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 13161023 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 13160964 Query: 490 ctggaggtgaccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggacc 549 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 13160963 ctggaggtcaccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcacc 13160904 Query: 550 acttggtacgtcggct 565 || |||||||| |||| Sbjct: 13160903 acctggtacgttggct 13160888
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 618 bits (312), Expect = e-174 Identities = 450/496 (90%) Strand = Plus / Minus Query: 70 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 129 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 13115658 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 13115599 Query: 130 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 189 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 13115598 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 13115539 Query: 190 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 249 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 13115538 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 13115479 Query: 250 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 309 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 13115478 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 13115419 Query: 310 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 369 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 13115418 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 13115359 Query: 370 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 429 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 13115358 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 13115299 Query: 430 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 489 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 13115298 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 13115239 Query: 490 ctggaggtgaccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggacc 549 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 13115238 ctggaggtcaccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcacc 13115179 Query: 550 acttggtacgtcggct 565 || |||||||| |||| Sbjct: 13115178 acctggtacgttggct 13115163
>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 193499 Score = 618 bits (312), Expect = e-174 Identities = 450/496 (90%) Strand = Plus / Plus Query: 70 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 129 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 169359 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 169418 Query: 130 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 189 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 169419 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 169478 Query: 190 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 249 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 169479 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 169538 Query: 250 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 309 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 169539 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 169598 Query: 310 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 369 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 169599 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 169658 Query: 370 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 429 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 169659 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 169718 Query: 430 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 489 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 169719 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 169778 Query: 490 ctggaggtgaccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggacc 549 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 169779 ctggaggtcaccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcacc 169838 Query: 550 acttggtacgtcggct 565 || |||||||| |||| Sbjct: 169839 acctggtacgttggct 169854
>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178827 Score = 618 bits (312), Expect = e-174 Identities = 450/496 (90%) Strand = Plus / Minus Query: 70 atctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcg 129 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | || Sbjct: 150586 atctacttgaagaagtacgggaggtcgagcacgtagaggaggaagtaggcccagaggacg 150527 Query: 130 ccggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgg 189 ||||| | ||||||||||||||||| |||||||||| | ||| || ||||||||||| Sbjct: 150526 ccggagatgccgccgaagaagaagccgccggtgaacttggcccagccgtcggcggtctgc 150467 Query: 190 agcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcg 249 ||||||||||||||||||||||| |||||||| || ||| |||||| |||||||||||| Sbjct: 150466 agcttgtcggcctccttcttgcggccggtgagcgtcagcgtcggcgccgtggacggctcg 150407 Query: 250 ccctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagt 309 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 150406 ccctcgccgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgagg 150347 Query: 310 ccgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtg 369 || ||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||| Sbjct: 150346 cctgcggcgccgagggcgccggcctggccgtgcaccggcgtgttgcggagcgggccggtg 150287 Query: 370 agcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagg 429 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 150286 agcgcgaagggcccgacgaggaggtagccgtgggcgaggccgacctcgatgccgcggagc 150227 Query: 430 agcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgaggggg 489 ||||||||||||||||||||||| || |||||||||||||||||||| ||||| || ||| Sbjct: 150226 agcgggctgacggcggtgcggtacgccgggaggttggagaggtaccaggcgaccagcggg 150167 Query: 490 ctggaggtgaccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggacc 549 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 150166 ctggaggtcaccggcgtctccaggctgccgatgaaggggtcgccattgatgggctgcacc 150107 Query: 550 acttggtacgtcggct 565 || |||||||| |||| Sbjct: 150106 acctggtacgttggct 150091
>gb|AY103985.1| Zea mays PCO103239 mRNA sequence Length = 1657 Score = 575 bits (290), Expect = e-161 Identities = 440/490 (89%) Strand = Plus / Minus Query: 71 tctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccagacggcgc 130 |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||| Sbjct: 1499 tctacttgaagaagtaggggaggtcgagcacgtagaggagaaagtaggcccagagcacgc 1440 Query: 131 cggatacaccgccgaagaagaagcctccggtgaactgcgaccacccttcggcggtctgga 190 |||| | |||||||||||||| || |||||||||| | ||| || ||||||||||| | Sbjct: 1439 cggagatgccgccgaagaagaaccccccggtgaacttggcccagccgtcggcggtctgca 1380 Query: 191 gcttgtcggcctccttcttgcgtccggtgagggtgagcaccggcgcggtggacggctcgc 250 ||||||||||||||||||| | |||||||| |||||| ||||| |||||||| || | Sbjct: 1379 gcttgtcggcctccttcttcctgccggtgagcgtgagcgtgggcgccgtggacgggtccc 1320 Query: 251 cctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggagacgagtc 310 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 1319 cctcgttgaaggaggcgacgccgtacatggtgaggcagacgctgaggatggcgacgaggc 1260 Query: 311 cgatggcgccgagtgtgccggcctgtccgtgcacgggcgtgttgcggagcgggccagtga 370 || ||||||||| | ||||||||| ||||||||||||||| ||||||||||||| |||| Sbjct: 1259 cggcggcgccgagcgcgccggcctggccgtgcacgggcgtgctgcggagcgggcccgtga 1200 Query: 371 gcgcgaaggggccgacgaggaggtagccatgggcgaggccgacctcgatgccgcggagga 430 |||||||||| || |||||||||||||| || |||||||||||||||| ||| || || | Sbjct: 1199 gcgcgaagggccccacgaggaggtagccgtgcgcgaggccgacctcgacgccccgcagca 1140 Query: 431 gcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcgacgagggggc 490 ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 1139 gcgggctcacggcggtgcggtaggccgggaggttggagaggtaccacgccacgagcgggc 1080 Query: 491 tggaggtgaccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctggacca 550 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1079 tggaggtgaccggcgtctccaggctgccgatgaacgggtcgccgttgatgggctgcacca 1020 Query: 551 cttggtacgt 560 | |||||||| Sbjct: 1019 cctggtacgt 1010
>emb|X57903.1|OS08RG10F O.sativa random single-copy DNA fragment 08RG108F Length = 162 Score = 77.8 bits (39), Expect = 4e-11 Identities = 52/55 (94%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 71 tctacttgaagaagtatgggaggtcgagc-acgtagaggaggaagtatgcccaga 124 |||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| Sbjct: 109 tctacttgaagaagtacgggaggtcgagctacgtagaggaggaagtaggcccaga 55
>ref|NM_117349.2| Arabidopsis thaliana unknown protein AT4G12800 mRNA, complete cds Length = 984 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 458 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 399 Query: 481 a 481 | Sbjct: 398 a 398
>emb|AL161535.2|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 35 Length = 199280 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 3165 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 3106 Query: 481 a 481 | Sbjct: 3105 a 3105
>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34 Length = 196107 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 194272 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 194213 Query: 481 a 481 | Sbjct: 194212 a 194212
>emb|AL049640.1|ATT20K18 Arabidopsis thaliana DNA chromosome 4, BAC clone T20K18 (ESSA project) Length = 79375 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 52660 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 52601 Query: 481 a 481 | Sbjct: 52600 a 52600
>emb|AJ245867.1|ATH245867 Arabidopsis thaliana mRNA for photosystem I subunit XI precursor Length = 928 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 426 ccgcggaggagagggttgacggcggtacggtaaccagggaggttggaaaggtaccacgcg 367 Query: 481 a 481 | Sbjct: 366 a 366
>gb|AY097427.1| Arabidopsis thaliana AT4g12800/T20K18_150 mRNA, complete cds Length = 660 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 311 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 252 Query: 481 a 481 | Sbjct: 251 a 251
>gb|AF446350.1|AF446350 Arabidopsis thaliana AT4g12800/T20K18_150 mRNA, complete cds Length = 821 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 347 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 288 Query: 481 a 481 | Sbjct: 287 a 287
>gb|AY059949.1| Arabidopsis thaliana probable photosystem I chain XI precursor (At4g12800; T20K18.150) mRNA, complete cds Length = 853 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 353 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 294 Query: 481 a 481 | Sbjct: 293 a 293
>gb|AF428447.1|AF428447 Arabidopsis thaliana AT4g12800/T20K18_150 mRNA, complete cds Length = 842 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 347 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 288 Query: 481 a 481 | Sbjct: 287 a 287
>emb|BX826431.1|CNS0A4G8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 823 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 333 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 274 Query: 481 a 481 | Sbjct: 273 a 273
>emb|BX826834.1|CNS0A38Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB68ZB09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 762 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 334 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 275 Query: 481 a 481 | Sbjct: 274 a 274
>emb|BX826723.1|CNS0A3CA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 816 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 328 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 269 Query: 481 a 481 | Sbjct: 268 a 268
>emb|BX826537.1|CNS0A35T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZF12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 797 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 309 ccgcggaggagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 250 Query: 481 a 481 | Sbjct: 249 a 249
>gb|AY087339.1| Arabidopsis thaliana clone 34400 mRNA, complete sequence Length = 944 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 ||||||||||| ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 459 ccgcggaggagagggttgacggcggtacggtaaccagggaggttggaaaggtaccacgcg 400 Query: 481 a 481 | Sbjct: 399 a 399
>emb|BX841515.1|CNS09YGY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZH07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 837 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 421 ccgcggaggagcgggctgacggcggtgcggtaggcggggaggttggagaggtaccacgcg 480 |||||||| || ||| |||||||||| ||||| | ||||||||||| |||||||||||| Sbjct: 349 ccgcggagaagagggttgacggcggtacggtatccagggaggttggaaaggtaccacgcg 290 Query: 481 a 481 | Sbjct: 289 a 289
>dbj|D50456.1|CUSPSAL Cucumis sativus mRNA for PsaL, complete cds Length = 812 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 69 aatctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccaga 124 ||||||||||| | |||| |||||||| | || |||||||||||||||||||||| Sbjct: 737 aatctacttgacgtagtaagggaggtccaagacatagaggaggaagtatgcccaga 682
>dbj|D83007.1|CUSPSALG Cucumis sativus seedling cotyledon psaL mRNA for subunit of photosystem I, complete cds Length = 811 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 69 aatctacttgaagaagtatgggaggtcgagcacgtagaggaggaagtatgcccaga 124 ||||||||||| | |||| |||||||| | || |||||||||||||||||||||| Sbjct: 674 aatctacttgacgtagtaagggaggtccaagacatagaggaggaagtatgcccaga 619
>dbj|AB219568.1| Fragaria x ananassa FrPSI mRNA for photosystem I protein, partial cds Length = 404 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 177 ttcggcggtctggagcttgtcggcctccttcttgcgtccggt 218 ||||||||| ||||||| ||||| |||||||||||| ||||| Sbjct: 183 ttcggcggtttggagctggtcgggctccttcttgcggccggt 142
>emb|X64445.1|SOPSAL S.oleracea psaL mRNA for subunit XI of photosystem I reaction center Length = 834 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 130 ccggatacaccgccgaagaagaagcctccggtgaact 166 ||||| ||||| ||||||||||| ||||||||||||| Sbjct: 676 ccggaaacaccaccgaagaagaaccctccggtgaact 640
>ref|XM_363340.1| Magnaporthe grisea 70-15 hypothetical protein (MG01266.4) partial mRNA Length = 1611 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 502 ggcgtctccaggctgccgatga 523 |||||||||||||||||||||| Sbjct: 1007 ggcgtctccaggctgccgatga 1028
>gb|AC146330.33| Medicago truncatula clone mth2-7g7, complete sequence Length = 117139 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 tacatgcatgcccctattaatc 72 |||||||||||||||||||||| Sbjct: 55000 tacatgcatgcccctattaatc 54979
>gb|BT018644.1| Zea mays clone EL01N0505B01.d mRNA sequence Length = 1630 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 ccatgggcgaggccgacctcg 417 ||||||||||||||||||||| Sbjct: 977 ccatgggcgaggccgacctcg 997
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 ggggctggaggtgaccggcgt 506 ||||||||||||||||||||| Sbjct: 970925 ggggctggaggtgaccggcgt 970905
>ref|XM_726405.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g00570) partial mRNA Length = 1050 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 455 cggggaggttggagaggtaccacgcgacg 483 ||||||||||||| |||||||||||||| Sbjct: 442 cggggaggttggaacggtaccacgcgacg 414
>gb|AC147501.9| Medicago truncatula clone mth2-12n2, complete sequence Length = 140523 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tacatgcatgcccctattaat 71 ||||||||||||||||||||| Sbjct: 4498 tacatgcatgcccctattaat 4518
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 453 ggcggggaggttggagaggtaccacgcgacgag 485 |||| |||||||||||||| |||||||| |||| Sbjct: 16116536 ggcgcggaggttggagaggaaccacgcgtcgag 16116504
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 cggagcgggccagtgagcgcg 375 ||||||||||||||||||||| Sbjct: 4178375 cggagcgggccagtgagcgcg 4178355 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 gggcgaggccgacctcgatg 420 |||||||||||||||||||| Sbjct: 8946158 gggcgaggccgacctcgatg 8946139
>gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequence Length = 35159 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 ccggcgtctccaggctgccga 520 ||||||||||||||||||||| Sbjct: 1748 ccggcgtctccaggctgccga 1728
>dbj|AP005726.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0028A18 Length = 151080 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 453 ggcggggaggttggagaggtaccacgcgacgag 485 |||| |||||||||||||| |||||||| |||| Sbjct: 54616 ggcgcggaggttggagaggaaccacgcgtcgag 54584
>dbj|AB039379.1| Streptomyces aureofaciens tcsD, tcsE, tcsF, tcsG, genes for beta-ketoacyl synthase, beta-ketoacyl synthase2, acyl carrier protein, asparagine synthase homolog, complete cds Length = 5188 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 ccggcgcggtggacggctcgc 250 ||||||||||||||||||||| Sbjct: 2273 ccggcgcggtggacggctcgc 2293
>ref|NM_001037124.1| Danio rerio zgc:123341 (zgc:123341), mRNA Length = 1067 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 tgaggcagacgctgaggatg 300 |||||||||||||||||||| Sbjct: 297 tgaggcagacgctgaggatg 316
>gb|AC150702.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1356E08, complete sequence Length = 136853 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gcgaaggggccgacgaggag 392 |||||||||||||||||||| Sbjct: 96226 gcgaaggggccgacgaggag 96245
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ggccgacctcgatgccgcgg 426 |||||||||||||||||||| Sbjct: 2408079 ggccgacctcgatgccgcgg 2408060 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ggcgaggccgacctcgatgc 421 |||||||||||||||||||| Sbjct: 577032 ggcgaggccgacctcgatgc 577051
>gb|AC109645.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0410D09, complete sequence Length = 43883 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gcgaaggggccgacgaggag 392 |||||||||||||||||||| Sbjct: 5272 gcgaaggggccgacgaggag 5291
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 406 aggccgacctcgatgccgcggaggagcg 433 ||||||||||||| ||||| |||||||| Sbjct: 6617 aggccgacctcgacgccgctgaggagcg 6590
>ref|XM_656558.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4046.2), mRNA Length = 1476 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 gatgggctggaccacttggt 556 |||||||||||||||||||| Sbjct: 908 gatgggctggaccacttggt 927
>gb|AC117192.3| Mus musculus BAC clone RP23-77A18 from 2, complete sequence Length = 161199 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aatctacttgaagaagtatg 88 |||||||||||||||||||| Sbjct: 143165 aatctacttgaagaagtatg 143184
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 ggccgacctcgatgccgcgg 426 |||||||||||||||||||| Sbjct: 3193784 ggccgacctcgatgccgcgg 3193803
>emb|AL391136.10| Human DNA sequence from clone RP11-304C14 on chromosome 10 Contains part of the TLL2 gene for tolloid-like 2, complete sequence Length = 66188 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 ggaggttggagaggtaccac 477 |||||||||||||||||||| Sbjct: 62775 ggaggttggagaggtaccac 62756
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 ttcggcggtctggagcttgtcggc 200 |||||||| ||||||||||||||| Sbjct: 1174925 ttcggcggactggagcttgtcggc 1174948
>emb|AL023553.5|HS347H13 Human DNA sequence from clone RP3-347H13 on chromosome 22 Contains the 3' end of the ACO2 gene for mitochondrial aconitase 2, the gene for a novel protein similar to yeast DNA-directed RNA Polymerase III 25 kD Polypeptide, the gene for the human ortholog of rat Pippin, the PMM1 gene for phosphomannomutase 1 (PMMH-22, yeast SEC53 ortholog), and two novel genes. Contains ESTs, STSs, GSSs and two putative CpG islands, complete sequence Length = 107818 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 agaggaggaagtatgcccag 123 |||||||||||||||||||| Sbjct: 64984 agaggaggaagtatgcccag 65003
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gccatgggcgaggccgacct 415 |||||||||||||||||||| Sbjct: 217167 gccatgggcgaggccgacct 217148
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gccatgggcgaggccgacct 415 |||||||||||||||||||| Sbjct: 215215 gccatgggcgaggccgacct 215196
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 ggccgacctcgatgccgcgg 426 |||||||||||||||||||| Sbjct: 173429 ggccgacctcgatgccgcgg 173448
>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome Length = 1010023 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 attaatctacttgaagaagt 85 |||||||||||||||||||| Sbjct: 781146 attaatctacttgaagaagt 781165
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ggccgacctcgatgccgcgg 426 |||||||||||||||||||| Sbjct: 2979673 ggccgacctcgatgccgcgg 2979654
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gcgaaggggccgacgaggag 392 |||||||||||||||||||| Sbjct: 18238013 gcgaaggggccgacgaggag 18238032
>gb|AY826885.1| Heterocapsa triquetra clone HTPSAL1 chloroplast photosystem I subunit XI mRNA, complete cds; nuclear gene for chloroplast product Length = 1197 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ggcgtgttgcggagcgggcc 365 |||||||||||||||||||| Sbjct: 911 ggcgtgttgcggagcgggcc 892
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 atgggcgaggccgacctcga 418 |||||||||||||||||||| Sbjct: 4350703 atgggcgaggccgacctcga 4350722
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 ggccgacctcgatgccgcgg 426 |||||||||||||||||||| Sbjct: 5407675 ggccgacctcgatgccgcgg 5407694
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gcgaaggggccgacgaggag 392 |||||||||||||||||||| Sbjct: 18396910 gcgaaggggccgacgaggag 18396929
>gb|BC107646.1| Danio rerio zgc:123341, mRNA (cDNA clone MGC:123341 IMAGE:7413031), complete cds Length = 1067 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 tgaggcagacgctgaggatg 300 |||||||||||||||||||| Sbjct: 297 tgaggcagacgctgaggatg 316
>emb|AL928659.16| Mouse DNA sequence from clone RP23-271B13 on chromosome 2, complete sequence Length = 209560 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 aatctacttgaagaagtatg 88 |||||||||||||||||||| Sbjct: 121761 aatctacttgaagaagtatg 121780 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,613,693 Number of Sequences: 3902068 Number of extensions: 3613693 Number of successful extensions: 65387 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63983 Number of HSP's gapped (non-prelim): 1400 length of query: 649 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 626 effective length of database: 17,143,297,704 effective search space: 10731704362704 effective search space used: 10731704362704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
