ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal37j19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CBX4_HUMAN (O00257) Chromobox protein homolog 4 (Polycomb 2 homo... 29 9.7

>CBX4_HUMAN (O00257) Chromobox protein homolog 4 (Polycomb 2 homolog) (Pc2)|
           (hPc2)
          Length = 558

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 310 ERPR*QTQVLAIHQFSSYFLTSDLDKPLNLDLIKSMKPTRHQPS 441
           ERP       A+ Q     L SDLD+P++L  +KS       PS
Sbjct: 444 ERPADLPPAAALRQPEVILLDSDLDEPIDLRSVKSRSEAGEPPS 487


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,042,323
Number of Sequences: 219361
Number of extensions: 1483400
Number of successful extensions: 3372
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3372
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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