ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal37j15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HKT6_ORYSA (Q6H501) Probable cation transporter HKT6 (OsHKT6) 227 2e-59
2HKT7_ORYSA (Q7XPF7) Probable cation transporter HKT7 (OsHKT7) 170 3e-42
3HKT4_ORYSA (Q7XPF8) Cation transporter HKT4 (OsHKT4) 151 1e-36
4HKT8_ORYSA (Q3YAF4) Cation transporter HKT8 (OsHKT8) 148 1e-35
5HKT1_ARATH (Q84TI7) Sodium transporter HKT1 (AtHKT1) 146 5e-35
6HKT1_ORYSA (Q6TPH3) Cation transporter HKT1 (OsHKT1) (Ni-OsHKT1)... 130 3e-30
7HKT2_ORYSA (Q93XI5) Cation transporter HKT2 (OsHKT2) (Po-OsHKT2) 127 2e-29
8HKT9_ORYSA (Q8L4K5) Probable cation transporter HKT9 (OsHKT9) 120 3e-27
9HKT3_ORYSA (Q8L481) Probable cation transporter HKT3 (OsHKT3) 117 3e-26
10TRK1_YEAST (P12685) High-affinity potassium transport protein 56 7e-08
11TRK1_SACBA (P28569) High-affinity potassium transport protein 54 4e-07
12TRK2_YEAST (P28584) Low-affinity potassium transport protein 52 2e-06
13TRK1_SCHPO (P47946) Potassium transport protein 1 51 2e-06
14TRK2_SCHPO (Q10065) Potassium transport protein 2 47 3e-05
15NTPJ_ENTHR (P43440) V-type sodium ATP synthase subunit J (EC 3.6... 35 0.12
16PQIA_SHIFL (P0AFM1) Paraquat-inducible protein A 33 0.77
17PQIA_ECOLI (P0AFL9) Paraquat-inducible protein A 33 0.77
18PQIA_ECOL6 (P0AFM0) Paraquat-inducible protein A 33 0.77
19LGT_AZOBR (Q8KSV0) Prolipoprotein diacylglyceryl transferase (EC... 32 1.7
20UNG2_LISMF (Q720K2) Uracil-DNA glycosylase 2 (EC 3.2.2.-) (UDG 2) 31 2.2
21UNG_BACSU (P39615) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG) 31 2.2
225HT1F_CAVPO (O08890) 5-hydroxytryptamine 1F receptor (5-HT-1F) (... 30 3.8
23UNG_RHIME (Q92LU5) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG) 29 8.5
24HBAD_ALDEL (P83134) Hemoglobin D alpha subunit (Hemoglobin D alp... 29 8.5
25UNG2_LISIN (Q92CI1) Uracil-DNA glycosylase 2 (EC 3.2.2.-) (UDG 2) 29 8.5

>HKT6_ORYSA (Q6H501) Probable cation transporter HKT6 (OsHKT6)|
          Length = 530

 Score =  227 bits (579), Expect = 2e-59
 Identities = 110/144 (76%), Positives = 123/144 (85%)
 Frame = -3

Query: 578 LYTVMMYLPGYTSFLPNYDDRYSKDEKRYNRKGLLEDWILSQLSYLAIFVMLICITEREA 399
           LYT+MMYLPGYTSFLP +D   SK EK   RKGLLE+WI S +SYLAIFVMLICITER++
Sbjct: 388 LYTIMMYLPGYTSFLPRHDGEDSKTEKINKRKGLLENWIFSHMSYLAIFVMLICITERDS 447

Query: 398 LTTDPLNFNVLSILFEVVSAYGNVGLSMGYSCKRLLKQDLRCKDASYGFAGRWSNEGKMI 219
           + TDPLNFNV SILFEVV AYGNVG S+GYSCKRLL  D RCKDASYGFAG+WS+ GK I
Sbjct: 448 MATDPLNFNVFSILFEVV-AYGNVGFSVGYSCKRLLNHDARCKDASYGFAGKWSDNGKAI 506

Query: 218 LIIVMVFGRLKASNLKGGKAWKLR 147
           LIIVM+FGRLK  N+KGG+AWKLR
Sbjct: 507 LIIVMLFGRLKTFNMKGGRAWKLR 530



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>HKT7_ORYSA (Q7XPF7) Probable cation transporter HKT7 (OsHKT7)|
          Length = 500

 Score =  170 bits (430), Expect = 3e-42
 Identities = 87/144 (60%), Positives = 104/144 (72%), Gaps = 1/144 (0%)
 Frame = -3

Query: 578 LYTVMMYLPGYTSFLPNYDDRYSKDEKRYNRK-GLLEDWILSQLSYLAIFVMLICITERE 402
           L+ +MMYLP YT++ P  ++  +KD    N+   LLE  +LSQLSYL IFV+ ICITER 
Sbjct: 356 LFVLMMYLPPYTTWFPFEENSTTKDSNAENQGIRLLESTLLSQLSYLTIFVIAICITERR 415

Query: 401 ALTTDPLNFNVLSILFEVVSAYGNVGLSMGYSCKRLLKQDLRCKDASYGFAGRWSNEGKM 222
            L  DPLNF+VLSI+ EVVSAYGNVG SMGYSC R +  D  C D   GF GRWS+ GK+
Sbjct: 416 KLKEDPLNFSVLSIVVEVVSAYGNVGFSMGYSCSRQINPDHLCTDKWTGFVGRWSDSGKL 475

Query: 221 ILIIVMVFGRLKASNLKGGKAWKL 150
           ILI VM FGRLK  ++KGGKAWKL
Sbjct: 476 ILIFVMFFGRLKKFSMKGGKAWKL 499



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>HKT4_ORYSA (Q7XPF8) Cation transporter HKT4 (OsHKT4)|
          Length = 552

 Score =  151 bits (382), Expect = 1e-36
 Identities = 73/138 (52%), Positives = 101/138 (73%), Gaps = 2/138 (1%)
 Frame = -3

Query: 578 LYTVMMYLPGYTSFLPNYDDRYSKDEKRYNR--KGLLEDWILSQLSYLAIFVMLICITER 405
           L+ V+MYLP   SFL    D     +K+ N   + L  ++ +++LS LA+F  L CITER
Sbjct: 415 LFAVVMYLPSDASFLTANADNQPLTDKKTNSISRALWRNFTVNKLSCLAMFTFLACITER 474

Query: 404 EALTTDPLNFNVLSILFEVVSAYGNVGLSMGYSCKRLLKQDLRCKDASYGFAGRWSNEGK 225
           +++++DPLNFN+ SI+FE++SA+GNVG S+GYSC++LLK D  CKDASYGF GRW+ EGK
Sbjct: 475 KSISSDPLNFNIFSIVFEIISAFGNVGYSLGYSCQKLLKPDATCKDASYGFVGRWTEEGK 534

Query: 224 MILIIVMVFGRLKASNLK 171
           +I+I+VM  GRLK   LK
Sbjct: 535 LIVILVMFLGRLKEFILK 552



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>HKT8_ORYSA (Q3YAF4) Cation transporter HKT8 (OsHKT8)|
          Length = 554

 Score =  148 bits (374), Expect = 1e-35
 Identities = 71/148 (47%), Positives = 105/148 (70%), Gaps = 5/148 (3%)
 Frame = -3

Query: 578 LYTVMMYLPGYTSFLPNYDDRYSKDEKRYNRKG-----LLEDWILSQLSYLAIFVMLICI 414
           LY VMMYLP YT+F+P   D++ +   +  ++G     + +  ++S LS LAIF+++ICI
Sbjct: 407 LYVVMMYLPPYTTFVP-VQDKHQQTGAQSGQEGSSSSSIWQKLLMSPLSCLAIFIVVICI 465

Query: 413 TEREALTTDPLNFNVLSILFEVVSAYGNVGLSMGYSCKRLLKQDLRCKDASYGFAGRWSN 234
           TER  +  DP+N++VL+I+ EV+SAYGNVG S GYSC R ++ D  C+D   GF+G+WS 
Sbjct: 466 TERRQIADDPINYSVLNIVVEVISAYGNVGFSTGYSCARQVRPDGSCRDLWVGFSGKWSK 525

Query: 233 EGKMILIIVMVFGRLKASNLKGGKAWKL 150
           +GK+ L+ VM +GRLK  +L GG+AWK+
Sbjct: 526 QGKLTLMAVMFYGRLKKFSLHGGQAWKI 553



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>HKT1_ARATH (Q84TI7) Sodium transporter HKT1 (AtHKT1)|
          Length = 506

 Score =  146 bits (368), Expect = 5e-35
 Identities = 80/153 (52%), Positives = 101/153 (66%), Gaps = 10/153 (6%)
 Frame = -3

Query: 578 LYTVMMYLPGYTSFLPNYD---------DRYSKDEKRYNRKGLLEDWILSQLSYLAIFVM 426
           L+ +MMYLP YT F+P  +         D  S++ K+  + GL    I+SQLS+L I + 
Sbjct: 353 LFILMMYLPPYTLFMPLTEQKTIEKEGGDDDSENGKKVKKSGL----IVSQLSFLTICIF 408

Query: 425 LICITEREALTTDPLNFNVLSILFEVVSAYGNVGLSMGYSCKRLLK-QDLRCKDASYGFA 249
           LI ITER+ L  DP+NFNVL+I  EV+SAYGNVG + GYSC+R +   D  CKDASYGFA
Sbjct: 409 LISITERQNLQRDPINFNVLNITLEVISAYGNVGFTTGYSCERRVDISDGGCKDASYGFA 468

Query: 248 GRWSNEGKMILIIVMVFGRLKASNLKGGKAWKL 150
           GRWS  GK +LIIVM +GR K    K G+AW L
Sbjct: 469 GRWSPMGKFVLIIVMFYGRFKQFTAKSGRAWIL 501



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>HKT1_ORYSA (Q6TPH3) Cation transporter HKT1 (OsHKT1) (Ni-OsHKT1) (Po-OsHKT1)|
          Length = 530

 Score =  130 bits (327), Expect = 3e-30
 Identities = 65/146 (44%), Positives = 99/146 (67%), Gaps = 3/146 (2%)
 Frame = -3

Query: 578 LYTVMMYLPGYTSFLPNYDDRYSKDEKRYNRKGLL-EDWILSQLSYLAIFVMLICITERE 402
           L+ ++MYLP  T+F  +  D  + ++K   + GL+ ++   SQL+ +++FV++  ITER 
Sbjct: 384 LFIILMYLPPSTTFALSNGDEKTANKKAKRKLGLVVQNLAFSQLACISVFVIVAFITERS 443

Query: 401 ALTTDPLNFNVLSILFEVVSAYGNVGLSMGYSCKRL--LKQDLRCKDASYGFAGRWSNEG 228
            L  DPLNF+ L+++FE++SAYGNVGLS GYSC RL  L     C+D  Y  +G WS+EG
Sbjct: 444 RLRNDPLNFSALNMIFEIISAYGNVGLSTGYSCSRLQKLHPGSICQDKPYSLSGWWSDEG 503

Query: 227 KMILIIVMVFGRLKASNLKGGKAWKL 150
           K++L+ VM++GRLKA     G+ W+L
Sbjct: 504 KLLLVFVMLYGRLKAFTKGTGEYWRL 529



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>HKT2_ORYSA (Q93XI5) Cation transporter HKT2 (OsHKT2) (Po-OsHKT2)|
          Length = 530

 Score =  127 bits (320), Expect = 2e-29
 Identities = 66/146 (45%), Positives = 97/146 (66%), Gaps = 3/146 (2%)
 Frame = -3

Query: 578 LYTVMMYLPGYTSFLPNYDDRYSKDEKRYNRKGLL-EDWILSQLSYLAIFVMLICITERE 402
           L+ ++MYLP  T+F  +  D  + ++K   + GL+  +   SQL+  A+FV++  ITER 
Sbjct: 384 LFIILMYLPPSTTFALSNGDEKTANKKAKRKLGLVVRNLAFSQLACNAVFVIVALITERS 443

Query: 401 ALTTDPLNFNVLSILFEVVSAYGNVGLSMGYSCKRL--LKQDLRCKDASYGFAGRWSNEG 228
            L  DPLNF+ L+++FEV+SAYGNVGL+ GYSC RL  L     C+D  Y  +G WS+EG
Sbjct: 444 RLRNDPLNFSALNMIFEVISAYGNVGLTTGYSCSRLQKLHPGSICQDKPYSLSGWWSDEG 503

Query: 227 KMILIIVMVFGRLKASNLKGGKAWKL 150
           K++L+ VM++GRLKA     G+ W+L
Sbjct: 504 KLLLVSVMLYGRLKAFTKGTGEYWRL 529



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>HKT9_ORYSA (Q8L4K5) Probable cation transporter HKT9 (OsHKT9)|
          Length = 509

 Score =  120 bits (301), Expect = 3e-27
 Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 12/146 (8%)
 Frame = -3

Query: 578 LYTVMMYLPGYTSFL----------PNYDDRYSKDEKRYNRKGLLEDWILSQLSYLAIFV 429
           L+ VMMY P  T             P  DDR SK       K  L+    S L++    +
Sbjct: 363 LFMVMMYTPSLTKLFSACQDHKQIGPESDDRTSKG------KPFLKTMAFSPLAFNTTVI 416

Query: 428 MLICITEREALTTDPLNFNVLSILFEVVSAYGNVGLSMGYSCKRLLKQD--LRCKDASYG 255
           ML+CITER +++TDPLNF+  +I+FEV+SAYGN+GLS GYSC R L+    + C +  Y 
Sbjct: 417 MLVCITERRSISTDPLNFSTFNIIFEVISAYGNIGLSTGYSCSRQLQHQDGIACHEKPYS 476

Query: 254 FAGRWSNEGKMILIIVMVFGRLKASN 177
           F+G WS  GK+IL++ M++GRL + +
Sbjct: 477 FSGWWSEPGKLILVLAMLYGRLNSKD 502



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>HKT3_ORYSA (Q8L481) Probable cation transporter HKT3 (OsHKT3)|
          Length = 509

 Score =  117 bits (292), Expect = 3e-26
 Identities = 62/146 (42%), Positives = 86/146 (58%), Gaps = 12/146 (8%)
 Frame = -3

Query: 578 LYTVMMYLPGYTSFL----------PNYDDRYSKDEKRYNRKGLLEDWILSQLSYLAIFV 429
           L+ VMMY P  T             P  DDR SK       K  L+    S L +    +
Sbjct: 363 LFMVMMYTPSLTKLFSACQDHKRIGPESDDRTSKG------KPFLKMMAFSPLGFNTTVI 416

Query: 428 MLICITEREALTTDPLNFNVLSILFEVVSAYGNVGLSMGYSCKRLL--KQDLRCKDASYG 255
           ML+CITER +L+TDPLN +  +I+FEV+SAYGN+GLS GYSC R L  ++ + C + +Y 
Sbjct: 417 MLVCITERRSLSTDPLNLSTFNIIFEVISAYGNIGLSTGYSCSRQLQHQEGIACHEKAYN 476

Query: 254 FAGRWSNEGKMILIIVMVFGRLKASN 177
           F+G WS  GK+IL++ M+ GRL + +
Sbjct: 477 FSGWWSEPGKLILVLAMLCGRLNSKD 502



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>TRK1_YEAST (P12685) High-affinity potassium transport protein|
          Length = 1235

 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
 Frame = -3

Query: 488  RKGLLED-WILSQLSYLAIFVMLICITEREALTTDPLNFNVLSILFEVVSAYGNVGLSMG 312
            RK L  D W L    +L +F++ IC  ++     +P NFN+ +ILFE+VSAYG VGLS+G
Sbjct: 1076 RKQLSFDLWFL----FLGLFIICICEGDKIKDVQEP-NFNIFAILFEIVSAYGTVGLSLG 1130

Query: 311  YSCKRLLKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGR 192
            Y             D +  F+ +++   K+++I +++ G+
Sbjct: 1131 Y------------PDTNQSFSRQFTTLSKLVIIAMLIRGK 1158



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>TRK1_SACBA (P28569) High-affinity potassium transport protein|
          Length = 1241

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = -3

Query: 452  LSYLAIFVMLICITEREALTT-DPLNFNVLSILFEVVSAYGNVGLSMGYSCKRLLKQDLR 276
            L +L + + +ICI ER+ +      NFNV +ILFE+VSAYG VGLS+GY           
Sbjct: 1089 LWFLFLGLFIICICERDKIKDIQRPNFNVFTILFEIVSAYGTVGLSLGY----------- 1137

Query: 275  CKDASYGFAGRWSNEGKMILIIVMVFGR 192
              + +  F+ + +   K+I+I +++ G+
Sbjct: 1138 -PNTNQSFSRQLTTLSKLIIIAMLIRGK 1164



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>TRK2_YEAST (P28584) Low-affinity potassium transport protein|
          Length = 889

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
 Frame = -3

Query: 500  KRYNRKGLLEDWILSQLS----YLAIFVMLICITE-REALTTDPLNFNVLSILFEVVSAY 336
            K+ + K  +   +  QLS    YL + + +ICI E R+    +  +FNV +ILFEVVSAY
Sbjct: 729  KKQSPKSFVGAHLRRQLSFDLWYLFLGLFIICICEGRKIEDVNKPDFNVFAILFEVVSAY 788

Query: 335  GNVGLSMGYSCKRLLKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGR 192
            G VGLS+GY             + +   + +++   K+++I +++ GR
Sbjct: 789  GTVGLSLGY------------PNTNTSLSAQFTVLSKLVIIAMLIRGR 824



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>TRK1_SCHPO (P47946) Potassium transport protein 1|
          Length = 841

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
 Frame = -3

Query: 575  YTVMMYLPGYTSFLPN-----YDDR----YSKDEKRYNRKGLLEDWILSQLSYLAIFVML 423
            Y VMMY+  Y   +       Y++R    Y  ++     K  L+D +  QLSY   ++ L
Sbjct: 667  YMVMMYISVYPVAINMRNTNVYEERSLGVYRTEDDE--GKSFLKDHLTEQLSYDLWYIFL 724

Query: 422  ----ICITEREALTTDPLN--FNVLSILFEVVSAYGNVGLSMGYSCKRLLKQDLRCKDAS 261
                ICI E   ++ +PL+  F++ ++LFEVVSAYG VGLS G S             ++
Sbjct: 725  GLFIICICEGGKIS-NPLDTDFSIFTVLFEVVSAYGTVGLSTGLS------------SSN 771

Query: 260  YGFAGRWSNEGKMILIIVMVFGR 192
               + R++   K+++I + + GR
Sbjct: 772  CSLSARFTTISKLVIIALELRGR 794



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>TRK2_SCHPO (Q10065) Potassium transport protein 2|
          Length = 880

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
 Frame = -3

Query: 548 YTSFLPNYDDRY----SKDEKRYNRKGLLEDWILSQLS----YLAIFVMLICITEREALT 393
           Y +   N DD      + D     RK  L D I  QLS    YL +   +I I E   L 
Sbjct: 721 YAADTENDDDNNINNNNNDNNTPKRKNFLMDHIQRQLSHDLWYLFLGYFIITIVEGRRLE 780

Query: 392 TDPL-NFNVLSILFEVVSAYGNVGLSMGY 309
           ++    F + +ILFEV+S YG VGLS+GY
Sbjct: 781 SEAEPQFTLFAILFEVISGYGTVGLSLGY 809



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>NTPJ_ENTHR (P43440) V-type sodium ATP synthase subunit J (EC 3.6.3.14)|
           (Na(+)-translocating ATPase subunit J)
          Length = 451

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 28/88 (31%), Positives = 42/88 (47%)
 Frame = -3

Query: 452 LSYLAIFVMLICITEREALTTDPLNFNVLSILFEVVSAYGNVGLSMGYSCKRLLKQDLRC 273
           LS   + +M++ +TE     T P    +  I FEV SA+G VGL+MG      L  DL  
Sbjct: 358 LSLCVVAIMVLSVTE-----TIPKTSGIEYIAFEVFSAFGTVGLTMG------LTPDL-- 404

Query: 272 KDASYGFAGRWSNEGKMILIIVMVFGRL 189
                      +  GK+++I +M  GR+
Sbjct: 405 -----------TLIGKLVIISLMYIGRV 421



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>PQIA_SHIFL (P0AFM1) Paraquat-inducible protein A|
          Length = 417

 Score = 32.7 bits (73), Expect = 0.77
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 282 PTLQGCFI-WVCWKMEQRGENDSDHCHGLREA*GVQFEGRKSM 157
           PTL+   I W+CW  +  G+ DS+  H + E   V+F GR SM
Sbjct: 316 PTLKMIAIAWLCWDAKGHGKRDSERMHLIYEV--VEFVGRWSM 356



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>PQIA_ECOLI (P0AFL9) Paraquat-inducible protein A|
          Length = 417

 Score = 32.7 bits (73), Expect = 0.77
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 282 PTLQGCFI-WVCWKMEQRGENDSDHCHGLREA*GVQFEGRKSM 157
           PTL+   I W+CW  +  G+ DS+  H + E   V+F GR SM
Sbjct: 316 PTLKMIAIAWLCWDAKGHGKRDSERMHLIYEV--VEFVGRWSM 356



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>PQIA_ECOL6 (P0AFM0) Paraquat-inducible protein A|
          Length = 417

 Score = 32.7 bits (73), Expect = 0.77
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 282 PTLQGCFI-WVCWKMEQRGENDSDHCHGLREA*GVQFEGRKSM 157
           PTL+   I W+CW  +  G+ DS+  H + E   V+F GR SM
Sbjct: 316 PTLKMIAIAWLCWDAKGHGKRDSERMHLIYEV--VEFVGRWSM 356



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>LGT_AZOBR (Q8KSV0) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 268

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
 Frame = -3

Query: 377 FNVLSILFEVVSAYGNVGLS-----MGYSCKRLLKQDLRCKDASYGFAGRWSNEGKMILI 213
           F +L+IL  + +  G  G++     +GY   R++ +  R  DA  GF    +  G+++ +
Sbjct: 189 FVLLAILVRMPAVRGRAGMTAGIFFIGYGLSRIIAEFFREPDAQLGFLYAGATMGQLLSV 248

Query: 212 IVMVFG 195
            +++FG
Sbjct: 249 PMVLFG 254



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>UNG2_LISMF (Q720K2) Uracil-DNA glycosylase 2 (EC 3.2.2.-) (UDG 2)|
          Length = 224

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/55 (27%), Positives = 31/55 (56%)
 Frame = -3

Query: 293 LKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKASNLKGGKAWKLR*HQLCE 129
           L  DL C+  + G+  RW+++G ++L  V+   R   +N   G+ W++  +++ E
Sbjct: 96  LHNDLNCEIPNNGYLIRWADQGVLLLNTVLTV-RAGQANSHRGQGWEILTNRIIE 149



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>UNG_BACSU (P39615) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 225

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = -3

Query: 293 LKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKASNLKGGKAWK 153
           L+QD+ C   ++G    W+ +G ++L  V+   R +A++ K GK W+
Sbjct: 97  LQQDIGCSIPNHGSLVSWAKQGVLLLNTVLTVRRGQANSHK-GKGWE 142



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>5HT1F_CAVPO (O08890) 5-hydroxytryptamine 1F receptor (5-HT-1F) (Serotonin|
           receptor 1F) (5-HT1F)
          Length = 366

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
 Frame = -2

Query: 405 RSTDHRST*FQCFEHTVRSCKC------IWKRGLVNGLQLQEATQTRPTLQGCFIWVCW 247
           +S    ST F    +TV+S +C       W+R  ++G + ++A  T   + G F+ +CW
Sbjct: 249 KSLSDPSTDFDKIHNTVKSPRCKLRHEKSWRRQKISGTRERKAATTLGLILGAFV-ICW 306



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>UNG_RHIME (Q92LU5) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 241

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = -3

Query: 293 LKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKASNLKGGKAWK 153
           L++DL    A +GF   W+ +G ++L  V+   R +A++ + G+ W+
Sbjct: 100 LQEDLGIPPARHGFLESWARQGVLLLNSVLTVERGRAASHQ-GRGWE 145



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>HBAD_ALDEL (P83134) Hemoglobin D alpha subunit (Hemoglobin D alpha chain)|
          Length = 141

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
 Frame = -3

Query: 578 LYTVMMYLPGYTSFLPNYDDRYSKDEKRYNRK---GLLEDWILSQLSYLAIFVMLICITE 408
           L  + +  P   ++ P++D  +  ++ R++ K   G L D +   +  L+  +  +    
Sbjct: 29  LERMFIVYPSTKTYFPHFDLHHDSEQIRHHGKKVVGALGDAV-KHIDNLSATLSELSNLH 87

Query: 407 REALTTDPLNFNVLSILFEVV 345
              L  DP+NF +LS  F+VV
Sbjct: 88  AYNLRVDPVNFKLLSHCFQVV 108



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>UNG2_LISIN (Q92CI1) Uracil-DNA glycosylase 2 (EC 3.2.2.-) (UDG 2)|
          Length = 224

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = -3

Query: 293 LKQDLRCKDASYGFAGRWSNEGKMILIIVMVFGRLKASNLKGGKAWKLR*HQLCE 129
           L  DL C+  + G+   W+++G ++L  V+   R   +N   G+ W+L  +++ E
Sbjct: 96  LHNDLNCEIPNNGYLIPWADQGVLLLNTVLTV-RAGQANSHRGQGWELLTNRIIE 149


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,680,208
Number of Sequences: 219361
Number of extensions: 1706302
Number of successful extensions: 3926
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3914
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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