>emb|AL442067.16| Human DNA sequence from clone RP11-128N14 on chromosome 13 Contains the
             3' end of the gene for muscleblind-like protein (MBLL39),
             the RAP2A gene for a member of the RAS oncogene family and
             a CpG island, complete sequence
          Length = 150297

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 116   aaaaaatatacacagtaattact 138
             |||||||||||||||||||||||
Sbjct: 75802 aaaaaatatacacagtaattact 75824

>ref|XM_483126.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1527

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 221 accatagcagcagcagcaatgccgc 245
           |||| ||||||||||||||||||||
Sbjct: 199 accacagcagcagcagcaatgccgc 223

>gb|AF400982.1| Syrrhopodon armatus isolate G438 glyceraldehyde 3-phosphate
           dehydrogenase gene, partial cds
          Length = 913

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 284 cggaggaaaccacatcgtcct 304
           |||||||||||||||||||||
Sbjct: 829 cggaggaaaccacatcgtcct 809

>gb|AF400981.1| Syrrhopodon fimbriatulus isolate G247 glyceraldehyde 3-phosphate
           dehydrogenase gene, partial cds
          Length = 910

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 284 cggaggaaaccacatcgtcct 304
           |||||||||||||||||||||
Sbjct: 838 cggaggaaaccacatcgtcct 818

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 221      accatagcagcagcagcaatgccgc 245
                |||| ||||||||||||||||||||
Sbjct: 24393638 accacagcagcagcagcaatgccgc 24393614

>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:B1142B04
          Length = 161964

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 221  accatagcagcagcagcaatgccgc 245
            |||| ||||||||||||||||||||
Sbjct: 9354 accacagcagcagcagcaatgccgc 9330

>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0686H11
          Length = 135273

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 221    accatagcagcagcagcaatgccgc 245
              |||| ||||||||||||||||||||
Sbjct: 133942 accacagcagcagcagcaatgccgc 133918

>dbj|AK066150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058G19, full
           insert sequence
          Length = 1527

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 221 accatagcagcagcagcaatgccgc 245
           |||| ||||||||||||||||||||
Sbjct: 199 accacagcagcagcagcaatgccgc 223

>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 222     ccatagcagcagcagcaatg 241
               ||||||||||||||||||||
Sbjct: 1097963 ccatagcagcagcagcaatg 1097982

>gb|AC159430.1| Trypanosoma brucei chromosome 3 clone RPCI93-28C22, complete sequence
          Length = 142068

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   ccatagcagcagcagcaatg 241
             ||||||||||||||||||||
Sbjct: 49614 ccatagcagcagcagcaatg 49595

>ref|XM_819215.1| Trypanosoma brucei TREU927 clone RPCI93-28C22 hypothetical protein
           (Tb927.3.3940) partial mRNA
          Length = 1782

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 ccatagcagcagcagcaatg 241
           ||||||||||||||||||||
Sbjct: 282 ccatagcagcagcagcaatg 301

>gb|AC127568.4| Mus musculus BAC clone RP24-215P13 from chromosome 10, complete sequence
          Length = 206192

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 186    tgctgtctccagaccaagtc 205
              ||||||||||||||||||||
Sbjct: 177899 tgctgtctccagaccaagtc 177918

>gb|AC122829.4| Mus musculus BAC clone RP23-224F12 from 10, complete sequence
          Length = 155915

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    tgctgtctccagaccaagtc 205
              ||||||||||||||||||||
Sbjct: 145782 tgctgtctccagaccaagtc 145763

>emb|AL021026.1|HS127D3 Human DNA sequence from clone RP1-127D3 on chromosome 1q23-25 Contains
              the FMO3 gene for flavin containing monooxygenase 3, a
              novel flavin containing monooxygenase, the FMO2 gene for
              flavin containing monooxygenase 2, the 3' end of a novel
              gene, a novel gene and the 5' end of the FMO1 gene for
              flavin containing monooxygenase 1, complete sequence
          Length = 162075

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 123    atacacagtaattactatatatac 146
              |||||||||| |||||||||||||
Sbjct: 159619 atacacagtatttactatatatac 159642

>emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15,
             complete sequence
          Length = 130618

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   cacatcgtccttgctgctgc 313
             ||||||||||||||||||||
Sbjct: 99714 cacatcgtccttgctgctgc 99733

>emb|CR354543.13| Zebrafish DNA sequence from clone DKEY-14M15 in linkage group 13,
              complete sequence
          Length = 140709

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     tccttttctggatgatatgg 113
              ||||||||||||||||||||
Sbjct: 129262 tccttttctggatgatatgg 129281

>emb|BX537143.5| Zebrafish DNA sequence from clone CH211-86H15 in linkage group 11,
              complete sequence
          Length = 204606

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    acaaaaaatatacacagtaa 133
              ||||||||||||||||||||
Sbjct: 117660 acaaaaaatatacacagtaa 117679

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 294     cacatcgtccttgctgctgc 313
               ||||||||||||||||||||
Sbjct: 3633422 cacatcgtccttgctgctgc 3633441


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,362,154
Number of Sequences: 3902068
Number of extensions: 3362154
Number of successful extensions: 122762
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122664
Number of HSP's gapped (non-prelim): 98
length of query: 321
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 299
effective length of database: 17,147,199,772
effective search space: 5127012731828
effective search space used: 5127012731828
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)