ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal37g24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1K6PL_RAT (P30835) 6-phosphofructokinase, liver type (EC 2.7.1.11... 32 1.6
2NQO2_MOUSE (Q9JI75) Ribosyldihydronicotinamide dehydrogenase [qu... 32 2.1
3K6PL_MOUSE (P12382) 6-phosphofructokinase, liver type (EC 2.7.1.... 32 2.1
4K6PL_HUMAN (P17858) 6-phosphofructokinase, liver type (EC 2.7.1.... 32 2.1
5K6PP_MOUSE (Q9WUA3) 6-phosphofructokinase type C (EC 2.7.1.11) (... 31 3.5
6SACC_BACSU (P05656) Levanase precursor (EC 3.2.1.65) (2,6-beta-D... 30 4.6
7DLL3_HUMAN (Q9NYJ7) Delta-like protein 3 precursor (Drosophila D... 30 4.6
8NRAM1_CHICK (P51027) Natural resistance-associated macrophage pr... 30 6.0
9Y876_METJA (Q58286) Putative ABC transporter permease protein MJ... 30 6.0
10K6PP_RABIT (P47859) 6-phosphofructokinase type C (EC 2.7.1.11) (... 30 6.0
11SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor 30 6.0
12LPXK_METCA (Q60B49) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.13... 30 7.9
13TRMD_AZOSE (Q5NXM5) tRNA (guanine-N(1)-)-methyltransferase (EC 2... 30 7.9

>K6PL_RAT (P30835) 6-phosphofructokinase, liver type (EC 2.7.1.11)|
           (Phosphofructokinase 1) (Phosphohexokinase)
           (Phosphofructo-1-kinase isozyme B) (PFK-B)
          Length = 779

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 611 SGAPTGVSPEDFVYGVYDGHHTYDEGQEKKGFWEDVSEW 495
           S   TG+S    VY V+DG     +GQ ++  W DV+ W
Sbjct: 419 SAVRTGISEGHTVYVVHDGFEGLAKGQVQEVGWHDVAGW 457



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>NQO2_MOUSE (Q9JI75) Ribosyldihydronicotinamide dehydrogenase [quinone] (EC|
           1.10.99.2) (NRH dehydrogenase [quinone] 2) (Quinone
           reductase 2) (QR2) (NRH:quinone oxidoreductase 2)
          Length = 230

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
 Frame = -3

Query: 611 SGAPTGVSPEDFVYGVYDGHHTYDEGQEKKGFWEDVSEWYQEAEPPQG--FQALISWSFP 438
           +GAP+  +P+ F YG+ + H  Y    +KK    D+ E  ++ +      FQ  + W   
Sbjct: 56  TGAPS--NPDVFSYGI-ETHEAY----KKKALTSDIFEEQRKVQEADLVIFQFPLYWFSV 108

Query: 437 PAVILG---------MAFDVPGEY 393
           PA++ G          AFD+PG Y
Sbjct: 109 PAILKGWMDRVLCRGFAFDIPGFY 132



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>K6PL_MOUSE (P12382) 6-phosphofructokinase, liver type (EC 2.7.1.11)|
           (Phosphofructokinase 1) (Phosphohexokinase)
           (Phosphofructo-1-kinase isozyme B) (PFK-B)
          Length = 779

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 611 SGAPTGVSPEDFVYGVYDGHHTYDEGQEKKGFWEDVSEW 495
           S   TG+S    VY V+DG     +GQ ++  W DV+ W
Sbjct: 419 SAVRTGISEGHTVYIVHDGFEGLAKGQVQEVGWHDVAGW 457



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>K6PL_HUMAN (P17858) 6-phosphofructokinase, liver type (EC 2.7.1.11)|
           (Phosphofructokinase 1) (Phosphohexokinase)
           (Phosphofructo-1-kinase isozyme B) (PFK-B)
          Length = 779

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 611 SGAPTGVSPEDFVYGVYDGHHTYDEGQEKKGFWEDVSEW 495
           S   TG+S    VY V+DG     +GQ ++  W DV+ W
Sbjct: 419 SAVRTGISHGHTVYVVHDGFEGLAKGQVQEVGWHDVAGW 457



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>K6PP_MOUSE (Q9WUA3) 6-phosphofructokinase type C (EC 2.7.1.11)|
           (Phosphofructokinase 1) (Phosphohexokinase)
           (Phosphofructo-1-kinase isozyme C) (PFK-C)
          Length = 784

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 19/74 (25%), Positives = 29/74 (39%)
 Frame = -3

Query: 611 SGAPTGVSPEDFVYGVYDGHHTYDEGQEKKGFWEDVSEWYQEAEPPQGFQALISWSFPPA 432
           S    G++    ++ +YDG   +  GQ K+  W DV  W  +                  
Sbjct: 430 SAVRVGIADGHKMFAIYDGFEGFANGQIKEIGWADVGGWTGQG----------------G 473

Query: 431 VILGMAFDVPGEYL 390
            ILG    +PG+YL
Sbjct: 474 SILGTKRTLPGKYL 487



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>SACC_BACSU (P05656) Levanase precursor (EC 3.2.1.65) (2,6-beta-D-fructan|
           fructanohydrolase)
          Length = 677

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = -3

Query: 611 SGAPTGVSPEDFVYGVYDGHHTYDEGQEKKGFWEDVSEWYQEAEPPQGFQALISWSFPPA 432
           +GA +G S   +  G +DG H  +E    K  W D           + F A +SWS  P+
Sbjct: 249 NGAVSGGSGMQYFVGDFDGTHFKNENPPNKVLWTDYG---------RDFYAAVSWSDIPS 299



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>DLL3_HUMAN (Q9NYJ7) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3)
          Length = 618

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
 Frame = +2

Query: 284 WTSPSCRSPAQ-SCAVCPACPSXXXXXXXXXXPPQCKGTPPAHRKPCRG*PR 436
           WT P C  P   S  + P  PS          P  C G P A+   C   PR
Sbjct: 243 WTGPLCTVPVSTSSCLSPRGPSSATTGCLVPGPGPCDGNPCANGGSCSETPR 294



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>NRAM1_CHICK (P51027) Natural resistance-associated macrophage protein 1 (NRAMP|
           1)
          Length = 555

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 462 LETLRRLSFLVPLGDILPEALLFLAFIIGVVAVIHSIHKVLR 587
           L TLR L +L+PLG +L   + F+ +++   ++ H    + R
Sbjct: 493 LPTLRGLGYLIPLGLLLVAYVAFVTYLLWTCSIAHGARFLAR 534



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>Y876_METJA (Q58286) Putative ABC transporter permease protein MJ0876|
          Length = 351

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +3

Query: 492 VPLGDILPEALLFLAFIIGVVAVIHSIHKVL 584
           + LGD++P  +  + FIIGV+ +I S++ +L
Sbjct: 193 ITLGDVIPMTICSIIFIIGVMFLIKSLNALL 223



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>K6PP_RABIT (P47859) 6-phosphofructokinase type C (EC 2.7.1.11)|
           (Phosphofructokinase 1) (Phosphohexokinase)
           (Phosphofructo-1-kinase isozyme C) (PFK-C)
          Length = 791

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 20/74 (27%), Positives = 30/74 (40%)
 Frame = -3

Query: 611 SGAPTGVSPEDFVYGVYDGHHTYDEGQEKKGFWEDVSEWYQEAEPPQGFQALISWSFPPA 432
           S    G++    ++ VYDG   + +GQ K+  W DV  W  +                  
Sbjct: 431 SAVRVGIADGHKMFAVYDGFDGFAKGQIKEIRWGDVGGWTGQG----------------G 474

Query: 431 VILGMAFDVPGEYL 390
            ILG    +PG+YL
Sbjct: 475 SILGTKRILPGKYL 488



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>SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor|
          Length = 2176

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = -3

Query: 572  YGVYDGH-----HTYDEGQEKKGFWEDVSEWYQEAEPPQGFQALISWSFPPAVI 426
            YG  DGH     HT  +  E++   ED+ EW +     Q F A+ S  +  AV+
Sbjct: 1142 YGRSDGHGKTLSHTVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQAVV 1195



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>LPXK_METCA (Q60B49) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A|
           4'-kinase)
          Length = 336

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -3

Query: 500 EWYQEAEPPQGFQALISWSFPPAVILGMAFDVPGEYLYIGAAIFIV 363
           +WY EA+PP G +AL S  F  AV L   +      + +G  + +V
Sbjct: 15  QWYAEAQPPWGLRAL-SRGFGAAVALRRGYYRRNAKVSLGVPVIVV 59



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>TRMD_AZOSE (Q5NXM5) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)|
           (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
          Length = 263

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -3

Query: 332 DKPHNFEPEIYMMERSKRDKLIADYNSMDIWDFNEKYGELWDFTVNRDDLIQ 177
           D PH   PEIY  ER  +  L  ++ ++  W   +  G  W     R DL+Q
Sbjct: 188 DCPHYTRPEIYAGERVPQVLLSGNHAAIRRWRLKQALGTTWR---RRPDLLQ 236


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,127,646
Number of Sequences: 219361
Number of extensions: 2096336
Number of successful extensions: 5246
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5245
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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